ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal12i11 |
|---|---|
| Clone Library Name | barley_pub |
>RL34_TOBAC (P41098) 60S ribosomal protein L34| Length = 120 Score = 79.3 bits (194), Expect = 3e-15 Identities = 38/41 (92%), Positives = 39/41 (95%) Frame = +1 Query: 34 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASG 156 MVQRLTYRKRHSYATKSNQ RVVKTPGGKL+YQ TKKRASG Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASG 41
>RL34_PEA (P40590) 60S ribosomal protein L34| Length = 120 Score = 78.6 bits (192), Expect = 4e-15 Identities = 38/41 (92%), Positives = 39/41 (95%) Frame = +1 Query: 34 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASG 156 MVQRLTYR+RHSYATKSNQ RVVKTPGGKLVYQ TKKRASG Sbjct: 1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASG 41
>RL34_ARATH (Q42351) 60S ribosomal protein L34| Length = 120 Score = 75.5 bits (184), Expect = 4e-14 Identities = 36/41 (87%), Positives = 37/41 (90%) Frame = +1 Query: 34 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRASG 156 MVQRL YR RHSYATKSNQ R+VKTPGGKLVYQ TKKRASG Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASG 41
>RL34_AEDTR (Q9NB34) 60S ribosomal protein L34| Length = 138 Score = 55.5 bits (132), Expect = 4e-08 Identities = 26/37 (70%), Positives = 31/37 (83%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKR 147 VQRLT R+R SY TKSN+ RVV+TPGG+LVY Y KK+ Sbjct: 1 VQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQ 37
>RL34_AEDAL (P45842) 60S ribosomal protein L34 (L31)| Length = 129 Score = 55.5 bits (132), Expect = 4e-08 Identities = 26/37 (70%), Positives = 31/37 (83%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKR 147 VQRLT R+R SY TKSN+ RVV+TPGG+LVY Y KK+ Sbjct: 1 VQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQ 37
>RL34_RAT (P11250) 60S ribosomal protein L34| Length = 116 Score = 53.5 bits (127), Expect = 2e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKK 144 VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 36
>RL34_PIG (Q29223) 60S ribosomal protein L34| Length = 116 Score = 53.5 bits (127), Expect = 2e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKK 144 VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 36
>RL34_MOUSE (Q9D1R9) 60S ribosomal protein L34| Length = 116 Score = 53.5 bits (127), Expect = 2e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKK 144 VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 36
>RL34_HUMAN (P49207) 60S ribosomal protein L34| Length = 116 Score = 53.5 bits (127), Expect = 2e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKK 144 VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 36
>RL34_BRARE (Q7ZWJ7) 60S ribosomal protein L34| Length = 116 Score = 53.5 bits (127), Expect = 2e-07 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKK 144 VQRLTYR+R SY T SN+TR+ +TPG ++VY YTKK Sbjct: 1 VQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKK 36
>RL34_ICTPU (Q90YT5) 60S ribosomal protein L34| Length = 116 Score = 51.2 bits (121), Expect = 8e-07 Identities = 23/36 (63%), Positives = 29/36 (80%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKK 144 VQRLTYR+ SY T SN+TR+ +TPG ++VY YTKK Sbjct: 1 VQRLTYRRTVSYNTTSNKTRLSRTPGNRIVYLYTKK 36
>RL34B_SCHPO (Q9URT8) 60S ribosomal protein L34-B (60S ribosomal protein L34-2)| Length = 111 Score = 48.9 bits (115), Expect = 4e-06 Identities = 20/37 (54%), Positives = 29/37 (78%) Frame = +1 Query: 34 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKK 144 M QR+TYR+R +Y T+SN+TR++KTPG + Y + KK Sbjct: 1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKK 37
>RL34A_SCHPO (O42846) 60S ribosomal protein L34-A| Length = 112 Score = 48.9 bits (115), Expect = 4e-06 Identities = 20/37 (54%), Positives = 29/37 (78%) Frame = +1 Query: 34 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKK 144 M QR+TYR+R +Y T+SN+TR++KTPG + Y + KK Sbjct: 1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKK 37
>RL34B_YEAST (P40525) 60S ribosomal protein L34-B| Length = 121 Score = 48.1 bits (113), Expect = 6e-06 Identities = 22/40 (55%), Positives = 31/40 (77%) Frame = +1 Query: 34 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRAS 153 M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q+ KK A+ Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLAT 40
>RL34A_YEAST (P87262) 60S ribosomal protein L34-A| Length = 121 Score = 48.1 bits (113), Expect = 6e-06 Identities = 22/40 (55%), Positives = 31/40 (77%) Frame = +1 Query: 34 MVQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRAS 153 M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q+ KK A+ Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLAT 40
>RL34_ENCCU (Q8SSA2) 60S ribosomal protein L34| Length = 110 Score = 33.1 bits (74), Expect = 0.21 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +1 Query: 37 VQRLTYRKRHSYATKSNQTRVVKTPGGKLVYQYTKKRA 150 ++ + K +Y T+SN+ R V+TP GKLV + KK + Sbjct: 1 MKNVLIHKGATYKTRSNRRRKVRTPSGKLVNRRVKKHS 38
>RL34_PYRAE (Q8ZTJ2) 50S ribosomal protein L34e| Length = 84 Score = 28.5 bits (62), Expect = 5.3 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = +1 Query: 61 RHSYATKSNQTRVVKTPGGKLVYQYTKKRASG 156 R +Y ++S + VKTPGG+ V Y +KRA G Sbjct: 3 RPAYRSRSVRRIKVKTPGGRTVIHY-EKRAKG 33
>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 877 Score = 28.1 bits (61), Expect = 6.9 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 153 ARPLLGVLVHELATWGLDDPRLVGLGGIAVPL 58 ARPL H++AT+G+D L+G G + P+ Sbjct: 641 ARPLFFSYPHDVATYGVDRQFLLGRGVLVSPV 672
>YGH2_YEAST (P53161) Hypothetical 13.4 kDa protein in HSF1-AFT1 intergenic| region Length = 119 Score = 28.1 bits (61), Expect = 6.9 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 93 RLVGLGGIAVPLPVGQTLHHVSVVSAA 13 R VGLGGI V + Q + H SV S A Sbjct: 75 RRVGLGGITVVIKAWQVITHFSVFSGA 101 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.130 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,377,175 Number of Sequences: 219361 Number of extensions: 431222 Number of successful extensions: 1133 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1133 length of database: 80,573,946 effective HSP length: 27 effective length of database: 74,651,199 effective search space used: 1791628776 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
