ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal12h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470216.1| Oryza sativa (japonica cultivar-group), predic... 176 2e-41
2dbj|AK104220.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 2e-41
3dbj|AK104105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 2e-41
4dbj|AK059776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 2e-41
5dbj|AK071628.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 1e-30
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 113 3e-22
7gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nippon... 113 3e-22
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 113 3e-22
9gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosom... 42 0.91
10dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 0.91
11gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 0.91
12gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 3.6
13gb|AC116839.8| Mus musculus chromosome 8, clone RP24-390L13, com... 40 3.6
14gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 3.6
15gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome 40 3.6
16gb|AY261360.1| African swine fever virus isolate Kenya 1950, com... 40 3.6
17gb|BC062787.1| Homo sapiens cDNA clone IMAGE:4762621, partial cds 40 3.6
18gb|BC017122.2| Homo sapiens cDNA clone IMAGE:3921486, partial cds 40 3.6
19emb|CR847867.6| Human DNA sequence from clone WI2-1744J18 on chr... 40 3.6
20gb|DQ397638.1| Cenarchaeum symbiosum clone C16E09, complete sequ... 40 3.6
21gb|DQ397615.1| Cenarchaeum symbiosum clone C20B09, complete sequ... 40 3.6
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.6
23ref|XM_392266.2| PREDICTED: Apis mellifera similar to ENSANGP000... 40 3.6
24dbj|AK130173.1| Homo sapiens cDNA FLJ26663 fis, clone MPG02628 40 3.6
25gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.6
26emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa... 40 3.6 
>ref|XM_470216.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 693

 Score =  176 bits (89), Expect = 2e-41
 Identities = 143/161 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   cttcgcgctcgaggtctgccccgtcctcctcgtccgcgtcgacgaggagcccaacggctg 61
           |||||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 291 cttcgcgctcgaggtctgccccgtgctacttgttcgcgtcgacgaggagcccaacggctg 350

                                                                       
Query: 62  ctgcatccgcctcctctcctgcaagctggaggggtcgccccttgtggaggcgcagaatga 121
           ||| ||  ||||||||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 351 ctgtattagcctcctctcctgcaagctcgagggatcaccgcttgtggaggctcaaaatga 410

                                                    
Query: 122 caaattctccgcttccatggtgaatagggttttctgcaaca 162
           ||| || || |||||||||||||||| ||| ||||||||||
Sbjct: 411 caagttttcagcttccatggtgaataaggtgttctgcaaca 451



 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                       
Query: 185 tcaacagcttacatcggatgctacaatcgaggttgcaattgacattccctttccgtttca 244
           ||||||||||||||||||| |||||||||||||| ||||||| || || ||||| |||| 
Sbjct: 474 tcaacagcttacatcggatactacaatcgaggttacaattgatataccatttccatttcg 533

                                         
Query: 245 agcactaccagttgaagctattgaatcaag 274
           |||| |||| |||||||| |||||||||||
Sbjct: 534 agcattacctgttgaagccattgaatcaag 563
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>dbj|AK104220.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E01, full
           insert sequence
          Length = 993

 Score =  176 bits (89), Expect = 2e-41
 Identities = 143/161 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   cttcgcgctcgaggtctgccccgtcctcctcgtccgcgtcgacgaggagcccaacggctg 61
           |||||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 354 cttcgcgctcgaggtctgccccgtgctacttgttcgcgtcgacgaggagcccaacggctg 413

                                                                       
Query: 62  ctgcatccgcctcctctcctgcaagctggaggggtcgccccttgtggaggcgcagaatga 121
           ||| ||  ||||||||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 414 ctgtattagcctcctctcctgcaagctcgagggatcaccgcttgtggaggctcaaaatga 473

                                                    
Query: 122 caaattctccgcttccatggtgaatagggttttctgcaaca 162
           ||| || || |||||||||||||||| ||| ||||||||||
Sbjct: 474 caagttttcagcttccatggtgaataaggtgttctgcaaca 514



 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                       
Query: 185 tcaacagcttacatcggatgctacaatcgaggttgcaattgacattccctttccgtttca 244
           ||||||||||||||||||| |||||||||||||| ||||||| || || ||||| |||| 
Sbjct: 537 tcaacagcttacatcggatactacaatcgaggttacaattgatataccatttccatttcg 596

                                         
Query: 245 agcactaccagttgaagctattgaatcaag 274
           |||| |||| |||||||| |||||||||||
Sbjct: 597 agcattacctgttgaagccattgaatcaag 626
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>dbj|AK104105.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C02, full
           insert sequence
          Length = 1008

 Score =  176 bits (89), Expect = 2e-41
 Identities = 143/161 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   cttcgcgctcgaggtctgccccgtcctcctcgtccgcgtcgacgaggagcccaacggctg 61
           |||||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 374 cttcgcgctcgaggtctgccccgtgctacttgttcgcgtcgacgaggagcccaacggctg 433

                                                                       
Query: 62  ctgcatccgcctcctctcctgcaagctggaggggtcgccccttgtggaggcgcagaatga 121
           ||| ||  ||||||||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 434 ctgtattagcctcctctcctgcaagctcgagggatcaccgcttgtggaggctcaaaatga 493

                                                    
Query: 122 caaattctccgcttccatggtgaatagggttttctgcaaca 162
           ||| || || |||||||||||||||| ||| ||||||||||
Sbjct: 494 caagttttcagcttccatggtgaataaggtgttctgcaaca 534



 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                       
Query: 185 tcaacagcttacatcggatgctacaatcgaggttgcaattgacattccctttccgtttca 244
           ||||||||||||||||||| |||||||||||||| ||||||| || || ||||| |||| 
Sbjct: 557 tcaacagcttacatcggatactacaatcgaggttacaattgatataccatttccatttcg 616

                                         
Query: 245 agcactaccagttgaagctattgaatcaag 274
           |||| |||| |||||||| |||||||||||
Sbjct: 617 agcattacctgttgaagccattgaatcaag 646
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>dbj|AK059776.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A11, full
           insert sequence
          Length = 1084

 Score =  176 bits (89), Expect = 2e-41
 Identities = 143/161 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   cttcgcgctcgaggtctgccccgtcctcctcgtccgcgtcgacgaggagcccaacggctg 61
           |||||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 354 cttcgcgctcgaggtctgccccgtgctacttgttcgcgtcgacgaggagcccaacggctg 413

                                                                       
Query: 62  ctgcatccgcctcctctcctgcaagctggaggggtcgccccttgtggaggcgcagaatga 121
           ||| ||  ||||||||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 414 ctgtattagcctcctctcctgcaagctcgagggatcaccgcttgtggaggctcaaaatga 473

                                                    
Query: 122 caaattctccgcttccatggtgaatagggttttctgcaaca 162
           ||| || || |||||||||||||||| ||| ||||||||||
Sbjct: 474 caagttttcagcttccatggtgaataaggtgttctgcaaca 514



 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                       
Query: 185 tcaacagcttacatcggatgctacaatcgaggttgcaattgacattccctttccgtttca 244
           ||||||||||||||||||| |||||||||||||| ||||||| || || ||||| |||| 
Sbjct: 537 tcaacagcttacatcggatactacaatcgaggttacaattgatataccatttccatttcg 596

                                         
Query: 245 agcactaccagttgaagctattgaatcaag 274
           |||| |||| |||||||| |||||||||||
Sbjct: 597 agcattacctgttgaagccattgaatcaag 626
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>dbj|AK071628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107C08, full
           insert sequence
          Length = 1205

 Score =  141 bits (71), Expect = 1e-30
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                       
Query: 2   cttcgcgctcgaggtctgccccgtcctcctcgtccgcgtcgacgaggagcccaacggctg 61
           |||||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 533 cttcgcgctcgaggtctgccccgtgctacttgttcgcgtcgacgaggagcccaacggctg 592

                                                                       
Query: 62  ctgcatccgcctcctctcctgcaagctggaggggtcgccccttgtggaggcgcagaatga 121
           ||| ||  ||||||||||||||||||| ||||| || || ||||||||||| || |||||
Sbjct: 593 ctgtattagcctcctctcctgcaagctcgagggatcaccgcttgtggaggctcaaaatga 652

              
Query: 122 caa 124
           |||
Sbjct: 653 caa 655



 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                       
Query: 185 tcaacagcttacatcggatgctacaatcgaggttgcaattgacattccctttccgtttca 244
           ||||||||||||||||||| |||||||||||||| ||||||| || || ||||| |||| 
Sbjct: 749 tcaacagcttacatcggatactacaatcgaggttacaattgatataccatttccatttcg 808

                                         
Query: 245 agcactaccagttgaagctattgaatcaag 274
           |||| |||| |||||||| |||||||||||
Sbjct: 809 agcattacctgttgaagccattgaatcaag 838



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 132 gcttccatggtgaatagggttttctgcaaca 162
           |||||||||||||||| ||| ||||||||||
Sbjct: 696 gcttccatggtgaataaggtgttctgcaaca 726
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  113 bits (57), Expect = 3e-22
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                           
Query: 2       cttcgcgctcgaggtctgccccgtcctcctcgtccgcgtcgacgaggagcccaacggctg 61
               |||||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 2563393 cttcgcgctcgaggtctgccccgtgctacttgttcgcgtcgacgaggagcccaacggctg 2563452

                                        
Query: 62      ctgcatccgcctcctctcctgcaag 86
               ||| ||  |||||||||||||||||
Sbjct: 2563453 ctgtattagcctcctctcctgcaag 2563477



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                
Query: 185     tcaacagcttacatcggatgctacaatcgaggt 217
               ||||||||||||||||||| |||||||||||||
Sbjct: 2564141 tcaacagcttacatcggatactacaatcgaggt 2564173



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                           
Query: 214     aggttgcaattgacattccctttccgtttcaagcactaccagttgaagctattgaatcaa 273
               ||||| ||||||| || || ||||| |||| |||| |||| |||||||| ||||||||||
Sbjct: 2564264 aggttacaattgatataccatttccatttcgagcattacctgttgaagccattgaatcaa 2564323

                
Query: 274     g 274
               |
Sbjct: 2564324 g 2564324



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 132     gcttccatggtgaatagggttttctgcaaca 162
               |||||||||||||||| ||| ||||||||||
Sbjct: 2564088 gcttccatggtgaataaggtgttctgcaaca 2564118
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>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0067N01, from chromosome 3, complete sequence
          Length = 159636

 Score =  113 bits (57), Expect = 3e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                          
Query: 2      cttcgcgctcgaggtctgccccgtcctcctcgtccgcgtcgacgaggagcccaacggctg 61
              |||||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 106701 cttcgcgctcgaggtctgccccgtgctacttgttcgcgtcgacgaggagcccaacggctg 106642

                                       
Query: 62     ctgcatccgcctcctctcctgcaag 86
              ||| ||  |||||||||||||||||
Sbjct: 106641 ctgtattagcctcctctcctgcaag 106617



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                               
Query: 185    tcaacagcttacatcggatgctacaatcgaggt 217
              ||||||||||||||||||| |||||||||||||
Sbjct: 105953 tcaacagcttacatcggatactacaatcgaggt 105921



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                          
Query: 214    aggttgcaattgacattccctttccgtttcaagcactaccagttgaagctattgaatcaa 273
              ||||| ||||||| || || ||||| |||| |||| |||| |||||||| ||||||||||
Sbjct: 105830 aggttacaattgatataccatttccatttcgagcattacctgttgaagccattgaatcaa 105771

               
Query: 274    g 274
              |
Sbjct: 105770 g 105770



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 132    gcttccatggtgaatagggttttctgcaaca 162
              |||||||||||||||| ||| ||||||||||
Sbjct: 106006 gcttccatggtgaataaggtgttctgcaaca 105976
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  113 bits (57), Expect = 3e-22
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                           
Query: 2       cttcgcgctcgaggtctgccccgtcctcctcgtccgcgtcgacgaggagcccaacggctg 61
               |||||||||||||||||||||||| || || || ||||||||||||||||||||||||||
Sbjct: 2563503 cttcgcgctcgaggtctgccccgtgctacttgttcgcgtcgacgaggagcccaacggctg 2563562

                                        
Query: 62      ctgcatccgcctcctctcctgcaag 86
               ||| ||  |||||||||||||||||
Sbjct: 2563563 ctgtattagcctcctctcctgcaag 2563587



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                
Query: 185     tcaacagcttacatcggatgctacaatcgaggt 217
               ||||||||||||||||||| |||||||||||||
Sbjct: 2564251 tcaacagcttacatcggatactacaatcgaggt 2564283



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                           
Query: 214     aggttgcaattgacattccctttccgtttcaagcactaccagttgaagctattgaatcaa 273
               ||||| ||||||| || || ||||| |||| |||| |||| |||||||| ||||||||||
Sbjct: 2564374 aggttacaattgatataccatttccatttcgagcattacctgttgaagccattgaatcaa 2564433

                
Query: 274     g 274
               |
Sbjct: 2564434 g 2564434



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 132     gcttccatggtgaatagggttttctgcaaca 162
               |||||||||||||||| ||| ||||||||||
Sbjct: 2564198 gcttccatggtgaataaggtgttctgcaaca 2564228
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>gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosome 15, complete
             sequence
          Length = 176561

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    ctctcctgcaagctggagggg 95
             |||||||||||||||||||||
Sbjct: 85223 ctctcctgcaagctggagggg 85243
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     ctgccccgtcctcctcgtccg 37
              |||||||||||||||||||||
Sbjct: 857235 ctgccccgtcctcctcgtccg 857255
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     ctgccccgtcctcctcgtccg 37
              |||||||||||||||||||||
Sbjct: 526284 ctgccccgtcctcctcgtccg 526304
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 3       ttcgcgctcgaggtctgccccgtc 26
               |||||||||||| |||||||||||
Sbjct: 1406901 ttcgcgctcgagctctgccccgtc 1406924
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>gb|AC116839.8| Mus musculus chromosome 8, clone RP24-390L13, complete sequence
          Length = 142874

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   ttgcaattgacattcccttt 236
             ||||||||||||||||||||
Sbjct: 63577 ttgcaattgacattcccttt 63596
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     cctcgtccgcgtcgacgagg 48
              ||||||||||||||||||||
Sbjct: 965135 cctcgtccgcgtcgacgagg 965116
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>gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome
          Length = 58638

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    cgacgaggagcccaacggct 60
             ||||||||||||||||||||
Sbjct: 31693 cgacgaggagcccaacggct 31674
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>gb|AY261360.1| African swine fever virus isolate Kenya 1950, complete genome
          Length = 193886

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 66    atccgcctcctctcctgcaagctg 89
             |||| |||||||||||||||||||
Sbjct: 43734 atccccctcctctcctgcaagctg 43711
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>gb|BC062787.1| Homo sapiens cDNA clone IMAGE:4762621, partial cds
          Length = 1077

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 agggttttctgcaacaacaa 166
           ||||||||||||||||||||
Sbjct: 457 agggttttctgcaacaacaa 438
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>gb|BC017122.2| Homo sapiens cDNA clone IMAGE:3921486, partial cds
          Length = 1082

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 agggttttctgcaacaacaa 166
           ||||||||||||||||||||
Sbjct: 462 agggttttctgcaacaacaa 443
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>emb|CR847867.6| Human DNA sequence from clone WI2-1744J18 on chromosome 1, complete
             sequence
          Length = 23685

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   agggttttctgcaacaacaa 166
             ||||||||||||||||||||
Sbjct: 11704 agggttttctgcaacaacaa 11685
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>gb|DQ397638.1| Cenarchaeum symbiosum clone C16E09, complete sequence
          Length = 40387

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ccccgtcctcctcgtccgcg 39
             ||||||||||||||||||||
Sbjct: 10256 ccccgtcctcctcgtccgcg 10237
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>gb|DQ397615.1| Cenarchaeum symbiosum clone C20B09, complete sequence
          Length = 39122

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ccccgtcctcctcgtccgcg 39
            ||||||||||||||||||||
Sbjct: 8755 ccccgtcctcctcgtccgcg 8774
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 22       ccgtcctcctcgtccgcgtcgacg 45
                |||||||||||||||||| |||||
Sbjct: 19522461 ccgtcctcctcgtccgcggcgacg 19522438
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>ref|XM_392266.2| PREDICTED: Apis mellifera similar to ENSANGP00000006371 (LOC408731),
            mRNA
          Length = 2694

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   cgtcctcctcgtccgcgtcg 42
            ||||||||||||||||||||
Sbjct: 2282 cgtcctcctcgtccgcgtcg 2301
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>dbj|AK130173.1| Homo sapiens cDNA FLJ26663 fis, clone MPG02628
          Length = 3060

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  agggttttctgcaacaacaa 166
            ||||||||||||||||||||
Sbjct: 2558 agggttttctgcaacaacaa 2539
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 22       ccgtcctcctcgtccgcgtcgacg 45
                |||||||||||||||||| |||||
Sbjct: 19448674 ccgtcctcctcgtccgcggcgacg 19448651
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>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144596

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    ccgtcctcctcgtccgcgtcgacg 45
             |||||||||||||||||| |||||
Sbjct: 54642 ccgtcctcctcgtccgcggcgacg 54619


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,916,484
Number of Sequences: 3902068
Number of extensions: 1916484
Number of successful extensions: 36995
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36794
Number of HSP's gapped (non-prelim): 201
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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