ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal12h12 |
|---|---|
| Clone Library Name | barley_pub |
>PSTB_MYCLE (Q50046) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)| (Phosphate-transporting ATPase) (ABC phosphate transporter) Length = 258 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 59 MANHFDVLGVTIFFGTAMRLMNIQIGELSRRAWLGEGADLLNSDNLLRTYN 211 MA D+ GV I++G+ ++++ + L R GA +LRT N Sbjct: 1 MAKRLDLKGVNIYYGSFQAVLDVSLAVLPRSVTAFIGASGCGKTTVLRTLN 51
>MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific-processing alpha-mannosidase) Length = 699 Score = 29.3 bits (64), Expect = 2.5 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +3 Query: 3 LWAFMQICGINFYVVLIDQWQTILMSL 83 L AF+ CG+ FY+ L D W+ + L Sbjct: 89 LLAFLLFCGLLFYINLADHWKALAFRL 115
>ZN462_HUMAN (Q96JM2) Zinc finger protein 462| Length = 1412 Score = 28.9 bits (63), Expect = 3.3 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 Query: 64 KPF*CPWCYYLFRHSDEIDEY 126 KP+ C CYY +H++E+D + Sbjct: 1232 KPYKCQLCYYETKHTEELDSH 1252
>HSLV_CAMJE (Q9PHK9) ATP-dependent protease hslV (EC 3.4.25.-)| Length = 180 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = +2 Query: 83 GVTIFFGTAMRLMNIQIGELSRRAWLGEGADLLNS----DNLLRTYNGPAAELAIDQQAE 250 G T+ G A+++ + G++ + G AD N +NLL++ G + AID E Sbjct: 27 GNTVLKGNAVKIRKLNNGKVLA-GFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKE 85 Query: 251 WFMSK 265 W K Sbjct: 86 WRKDK 90
>Y623_DROME (Q9VFB7) Hypothetical protein CG6623| Length = 1145 Score = 28.1 bits (61), Expect = 5.6 Identities = 7/18 (38%), Positives = 14/18 (77%) Frame = -2 Query: 235 DGKLCCWSIVCSQQIIRV 182 +G LCCW VC+ +++++ Sbjct: 338 EGALCCWEFVCALEVLQL 355
>RIR1_YEAST (P21524) Ribonucleoside-diphosphate reductase large chain 1 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 1) (Ribonucleotide reductase R1 subunit 1) Length = 888 Score = 28.1 bits (61), Expect = 5.6 Identities = 22/79 (27%), Positives = 36/79 (45%) Frame = +2 Query: 17 ANLRYQFLCGLDRSMANHFDVLGVTIFFGTAMRLMNIQIGELSRRAWLGEGADLLNSDNL 196 +N+R++ + + +A+ F +L + F RL+NIQI E A + +L D Sbjct: 498 SNMRHRPIALGVQGLADTFMLLRLP-FDSEEARLLNIQIFETIYHASMEASCELAQKDGP 556 Query: 197 LRTYNGPAAELAIDQQAEW 253 T+ G A I Q W Sbjct: 557 YETFQGSPASQGILQFDMW 575
>PUR6_PYRHO (O58058) Phosphoribosylaminoimidazole carboxylase catalytic subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 177 Score = 27.7 bits (60), Expect = 7.3 Identities = 19/43 (44%), Positives = 24/43 (55%) Frame = +2 Query: 215 PAAELAIDQQAEWFMSKNAIVSGLELLGIKYGAPKDASPKLRR 343 P A +AID +KNA + L +LGIKY K+ KLRR Sbjct: 117 PVATVAIDN------AKNAALLALRILGIKYPEIKE---KLRR 150
>ZN406_MOUSE (Q7TS63) Zinc finger protein 406| Length = 1219 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = -1 Query: 164 HQARHVSIAPQFEYSSISSLCRKR**HQGHQNGLPLIYQDHIKIDTADLHK 12 H H+ Q YSSI+ C KR Q H N L D T D +K Sbjct: 752 HTREHLYYCSQCHYSSITKNCLKRHVIQKHSNILLKCPTDGCDYSTPDKYK 802
>ZN406_HUMAN (Q9P243) Zinc finger protein 406 (Protein ZFAT)| Length = 1243 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = -1 Query: 164 HQARHVSIAPQFEYSSISSLCRKR**HQGHQNGLPLIYQDHIKIDTADLHK 12 H H+ Q YSSI+ C KR Q H N L D T D +K Sbjct: 764 HTREHLYYCSQCHYSSITKNCLKRHVIQKHSNILLKCPTDGCDYSTPDKYK 814
>RP542_RHIME (P33985) RNA polymerase sigma-54 factor| Length = 513 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = +1 Query: 220 SRACHRSTGRVVYVQEC--NCIWLRTSRHQ 303 SR+C +S+G +++ EC N WL S Q Sbjct: 334 SRSCRKSSGEQIFLNECLQNANWLTRSLDQ 363
>RELA_STAAW (P0A0E9) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 215 VHCMFSTDYPS*ADLLLHQARHVSIAPQFEYSSIS-SLCRKR**HQGHQNGLPLI 54 V+ + + +YP AD +LH+A+ A ++EY S + + Q +NGLP I Sbjct: 4 VYHIMNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYI 58
>RELA_STAAU (P0A0F0) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 215 VHCMFSTDYPS*ADLLLHQARHVSIAPQFEYSSIS-SLCRKR**HQGHQNGLPLI 54 V+ + + +YP AD +LH+A+ A ++EY S + + Q +NGLP I Sbjct: 4 VYHIMNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYI 58
>RELA_STAAS (Q6G8T5) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 215 VHCMFSTDYPS*ADLLLHQARHVSIAPQFEYSSIS-SLCRKR**HQGHQNGLPLI 54 V+ + + +YP AD +LH+A+ A ++EY S + + Q +NGLP I Sbjct: 4 VYHIMNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYI 58
>RELA_STAAR (Q6GG70) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 215 VHCMFSTDYPS*ADLLLHQARHVSIAPQFEYSSIS-SLCRKR**HQGHQNGLPLI 54 V+ + + +YP AD +LH+A+ A ++EY S + + Q +NGLP I Sbjct: 4 VYHIMNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYI 58
>RELA_STAAN (Q99TL8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 215 VHCMFSTDYPS*ADLLLHQARHVSIAPQFEYSSIS-SLCRKR**HQGHQNGLPLI 54 V+ + + +YP AD +LH+A+ A ++EY S + + Q +NGLP I Sbjct: 4 VYHIMNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYI 58
>RELA_STAAM (Q931Q4) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 27.3 bits (59), Expect = 9.5 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 215 VHCMFSTDYPS*ADLLLHQARHVSIAPQFEYSSIS-SLCRKR**HQGHQNGLPLI 54 V+ + + +YP AD +LH+A+ A ++EY S + + Q +NGLP I Sbjct: 4 VYHIMNNEYPYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYI 58
>PDE4B_HUMAN (Q07343) cAMP-specific 3',5'-cyclic phosphodiesterase 4B (EC| 3.1.4.17) (DPDE4) (PDE32) Length = 736 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = +2 Query: 20 NLRYQFLCGLDRSMANHFDVLGVTIFFGTAMRLMNIQIGELSRR 151 N++ F C L +S ++ + LG+ ++ G N+Q+ LS+R Sbjct: 15 NVKDYFECSLSKSYSSSSNTLGIDLWRGRRCCSGNLQLPPLSQR 58
>CMC1_DROME (Q9VA73) Calcium-binding mitochondrial carrier Aralar1| Length = 695 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/64 (26%), Positives = 31/64 (48%) Frame = -1 Query: 296 LEVLSQIQLHSWT*TTLPVDRWQALLLVHCMFSTDYPS*ADLLLHQARHVSIAPQFEYSS 117 +E++ Q+ LH+ + + +LL S P D+L H A V A + +YS Sbjct: 245 MELIKQVYLHATEGSRTDMITKDQILLAAQTMSQITPLEIDILFHLAGAVHQAGRIDYSD 304 Query: 116 ISSL 105 +S++ Sbjct: 305 LSNI 308
>BTBD9_HUMAN (Q96Q07) BTB/POZ domain-containing protein 9| Length = 612 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = +1 Query: 166 RSRSA*LG*SVENIQWTSSRACHRSTGRVVYVQECNCIWLRTSRHQVW 309 RSR+A L +N W S CH+ + VQ + + R +W Sbjct: 442 RSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIGSIRLLLW 489 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,248,114 Number of Sequences: 219361 Number of extensions: 1066610 Number of successful extensions: 2721 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2637 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2721 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
