| Clone Name | baal12h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104672.1| Zea mays PCO101322 mRNA sequence Length = 1062 Score = 54.0 bits (27), Expect = 3e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 250 gtggtttatgtccaagaatgcaattgtatctggcttagaacttctaggcatcaag 304 ||||||||| |||||| ||||||||||||||||| | | |||||||| |||||| Sbjct: 703 gtggtttatatccaaggatgcaattgtatctggccttggtcttctaggtatcaag 757
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 257 atgtccaagaatgcaattgtatct 280 |||||||||||||||||||||||| Sbjct: 23025148 atgtccaagaatgcaattgtatct 23025125
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 257 atgtccaagaatgcaattgtatct 280 |||||||||||||||||||||||| Sbjct: 95554 atgtccaagaatgcaattgtatct 95531
>emb|AL356111.13| Human DNA sequence from clone RP11-501G6 on chromosome 13 Contains a novel gene, complete sequence Length = 150955 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 agattgatgaatattcaaatt 133 ||||||||||||||||||||| Sbjct: 94975 agattgatgaatattcaaatt 94995
>gb|AC134474.4| Mus musculus BAC clone RP23-234N16 from chromosome 6, complete sequence Length = 171491 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 ttttatgtggtcttgatagatcaa 59 ||||||||| |||||||||||||| Sbjct: 108243 ttttatgtgctcttgatagatcaa 108220
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gcttgccatcgatcaacagg 245 |||||||||||||||||||| Sbjct: 5232417 gcttgccatcgatcaacagg 5232398
>ref|XM_447591.1| Candida glabrata CBS138 hypothetical protein (CAGL0I07865g) partial mRNA Length = 2925 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccattttgatgtccttggtg 86 |||||||||||||||||||| Sbjct: 1340 ccattttgatgtccttggtg 1359
>emb|CR855371.13| Chicken DNA sequence from clone WAG-45A21, complete sequence Length = 104062 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 tgcctggcttggtgaaggagcaga 174 |||||||||| ||||||||||||| Sbjct: 76404 tgcctggctttgtgaaggagcaga 76381
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccattttgatgtccttggtg 86 |||||||||||||||||||| Sbjct: 759796 ccattttgatgtccttggtg 759815
>gb|DQ445138.1| Beta vulgaris chromosome 9 clone BAC132 genomic sequence Length = 32673 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gaatattcaaattggggagc 140 |||||||||||||||||||| Sbjct: 27560 gaatattcaaattggggagc 27579
>gb|AC002308.1| Homo sapiens Chromosome 22q11.2 BAC Clone 1000e4 In IGLC Region, complete sequence Length = 151111 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gggcctttatgcaaatctgc 26 |||||||||||||||||||| Sbjct: 134002 gggcctttatgcaaatctgc 133983
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 atgtccaagaatgcaattgtatct 280 ||||||||||||||||| |||||| Sbjct: 16070113 atgtccaagaatgcaatggtatct 16070136
>gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0039C14, complete sequence Length = 135098 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 atgtccaagaatgcaattgtatct 280 ||||||||||||||||| |||||| Sbjct: 85218 atgtccaagaatgcaatggtatct 85241
>gb|AC099636.8| Mus musculus chromosome 19, clone RP24-149H13, complete sequence Length = 141121 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tgggcctttatgcaaatctg 25 |||||||||||||||||||| Sbjct: 55330 tgggcctttatgcaaatctg 55349
>gb|AC124632.11| Mus musculus chromosome 19, clone RP23-445I14, complete sequence Length = 178671 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tgggcctttatgcaaatctg 25 |||||||||||||||||||| Sbjct: 53039 tgggcctttatgcaaatctg 53020
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 atgtccaagaatgcaattgtatct 280 ||||||||||||||||| |||||| Sbjct: 16078354 atgtccaagaatgcaatggtatct 16078377
>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22 Length = 909203 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gggcctttatgcaaatctgc 26 |||||||||||||||||||| Sbjct: 700999 gggcctttatgcaaatctgc 700980
>dbj|D87015.2| Homo sapiens immunoglobulin lambda gene locus DNA, clone:68D6 Length = 36240 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gggcctttatgcaaatctgc 26 |||||||||||||||||||| Sbjct: 4374 gggcctttatgcaaatctgc 4355
>dbj|D87007.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:48A11 Length = 37302 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gggcctttatgcaaatctgc 26 |||||||||||||||||||| Sbjct: 34945 gggcctttatgcaaatctgc 34926 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,218,360 Number of Sequences: 3902068 Number of extensions: 3218360 Number of successful extensions: 59703 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59562 Number of HSP's gapped (non-prelim): 141 length of query: 353 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 331 effective length of database: 17,147,199,772 effective search space: 5675723124532 effective search space used: 5675723124532 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)