ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal12g16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc... 167 3e-38
2dbj|AK064203.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
4dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
5emb|CR956360.10| Pig DNA sequence from clone CH242-245E12 on chr... 44 0.30
6ref|XM_474446.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
7ref|XM_472502.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
8ref|XM_471771.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
9gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
10gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
11gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
12gb|AY811840.1| Schistosoma japonicum SJCHGC03025 protein mRNA, p... 42 1.2
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.2
14emb|CT009736.8| Mouse DNA sequence from clone RP23-99F22 on chro... 42 1.2
15emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4,... 42 1.2
16emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4,... 42 1.2
17emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chro... 42 1.2
18gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.2
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
20dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
21dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
22dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
24dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
26dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
27dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
28dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
29dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
30dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
31dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
32dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
33dbj|AP003737.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
34dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
35dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
36gb|AC154342.2| Mus musculus BAC clone RP23-227D10 from 17, compl... 42 1.2
37gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
38gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
39emb|AL954153.6|CNS08CCR Oryza sativa chromosome 12, . Partial se... 42 1.2
40emb|AL663004.3|OSJN00207 Oryza sativa genomic DNA, chromosome 4,... 42 1.2
41emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 42 1.2
42emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on ch... 42 1.2
43ref|XM_416738.1| PREDICTED: Gallus gallus similar to probable du... 40 4.6
44gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosom... 40 4.6
45gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
46gb|AC135114.4| Mus musculus BAC clone RP24-69H7 from chromosome ... 40 4.6
47gb|AC122933.4| Mus musculus BAC clone RP23-18P3 from 14, complet... 40 4.6
48gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
49gb|AC144710.2| Danio rerio clone CH211-215E4, complete sequence 40 4.6
50ref|XM_779409.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.6
51gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Can... 40 4.6
52emb|BX537275.8| Zebrafish DNA sequence from clone DKEYP-120E12 i... 40 4.6
53emb|CR387497.1| Gallus gallus finished cDNA, clone ChEST142b23 40 4.6
54gb|AF240628.2|AF240628 Homo sapiens chromosome 21 clone B292N6 m... 40 4.6
55emb|BX664738.14| Zebrafish DNA sequence from clone DKEY-240A9 in... 40 4.6
56emb|BX537269.8| Zebrafish DNA sequence from clone DKEY-181H1 in ... 40 4.6
57dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
58dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15,... 40 4.6
59dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
60gb|AF111709.1|AF111709 Oryza sativa subsp. indica Retrosat 1 ret... 40 4.6
61dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.6
62emb|AL806528.14| Mouse DNA sequence from clone RP23-190C17 on ch... 40 4.6
63gb|AC164612.4| Mus musculus BAC clone RP23-361B11 from chromosom... 40 4.6
64dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 4.6 
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete
             sequence
          Length = 120132

 Score =  167 bits (84), Expect = 3e-38
 Identities = 135/151 (89%), Gaps = 1/151 (0%)
 Strand = Plus / Minus

                                                                         
Query: 2     attgcccctttccgtagcatggataaaccatggcaaagtncgaatagaagctagcagggt 61
             |||||||||||||||  |||||| ||||||||| ||||| ||||| ||||||||||||||
Sbjct: 11983 attgcccctttccgtgacatggacaaaccatgg-aaagttcgaattgaagctagcagggt 11925

                                                                         
Query: 62    tcttcttgatcttgagcttcaccataaagggctagatgcagctctcttgttgttcttgaa 121
             |||| ||||||||||| | ||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 11924 tcttattgatcttgagttacaccataaaggacttgatgcagctcttttgttgttcttgaa 11865

                                            
Query: 122   atatacagatgaagaaagatctttgcgaggt 152
             ||||  |||||||||||  ||||||||||||
Sbjct: 11864 atatgtagatgaagaaaagtctttgcgaggt 11834



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                            
Query: 155   aacaaagttggctgttcatgtcttgcgcatatgccaagcaaatattg 201
             ||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 11761 aacaaagttggctgttcatgtcttgcgtatatgtcaagcaagtattg 11715
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>dbj|AK064203.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-E01, full
           insert sequence
          Length = 1600

 Score =  161 bits (81), Expect = 2e-36
 Identities = 211/253 (83%), Gaps = 1/253 (0%)
 Strand = Plus / Plus

                                                                       
Query: 96  gatgcagctctcttgttgttcttgaaatatacagatgaagaaagatctttgcgaggtgga 155
           ||||||||||| || || |||||||||||| |  ||||||||||||||||| |||| || 
Sbjct: 1   gatgcagctcttttattattcttgaaatatgctaatgaagaaagatctttgagaggaggg 60

                                                                       
Query: 156 acaaagttggctgttcatgtcttgcgcatatgccaagcaaatattgaatctaaccttact 215
           ||||||||||||||||||||||||||  |||||||||| |||||||||||| |   || |
Sbjct: 61  acaaagttggctgttcatgtcttgcgtctatgccaagccaatattgaatctcatgataat 120

                                                                       
Query: 216 gatcagataaaagtaccaacactctttggtctccttcacctgctcagtagcaaaaaagca 275
            |||| ||| || | ||||| ||  |||| ||||||  ||||||   | ||||||| || 
Sbjct: 121 aatcaaatacaattgccaactctagttggcctcctttgcctgcttgctggcaaaaaggcc 180

                                                                       
Query: 276 tacaacaatgtcctccttcgccataatgtgttctgcattttgcaaattgctgctggaagg 335
           |||||||||||    ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 tacaacaatgtatatcttcgacataatgtgttctgcatattgcaaattgctgctggaagg 240

                        
Query: 336 ccctccaacactg 348
             |||||||||||
Sbjct: 241 -tctccaacactg 252
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  125 bits (63), Expect = 1e-25
 Identities = 117/134 (87%), Gaps = 1/134 (0%)
 Strand = Plus / Plus

                                                                            
Query: 19       catggataaaccatggcaaagtncgaatagaagctagcagggttcttcttgatcttgagc 78
                |||||| ||||||||| ||||| ||||| |||||| ||||||||||| ||||||| ||| 
Sbjct: 14490365 catggacaaaccatgg-aaagttcgaatggaagctggcagggttcttattgatctcgagt 14490423

                                                                            
Query: 79       ttcaccataaagggctagatgcagctctcttgttgttcttgaaatatacagatgaagaaa 138
                ||||||||||||| || ||||||||||| || || |||||||||||| |  |||||||||
Sbjct: 14490424 ttcaccataaaggacttgatgcagctcttttattattcttgaaatatgctaatgaagaaa 14490483

                              
Query: 139      gatctttgcgaggt 152
                |||||||| |||||
Sbjct: 14490484 gatctttgagaggt 14490497



 Score =  111 bits (56), Expect = 2e-21
 Identities = 149/180 (82%)
 Strand = Plus / Plus

                                                                            
Query: 156      acaaagttggctgttcatgtcttgcgcatatgccaagcaaatattgaatctaaccttact 215
                ||||||||||||||||||||||||||  |||||||||| |||||||||||| |   || |
Sbjct: 14490577 acaaagttggctgttcatgtcttgcgtctatgccaagccaatattgaatctcatgataat 14490636

                                                                            
Query: 216      gatcagataaaagtaccaacactctttggtctccttcacctgctcagtagcaaaaaagca 275
                 |||| ||| || | ||||| ||  |||| ||||||  ||||||   | ||||||| || 
Sbjct: 14490637 aatcaaatacaattgccaactctagttggcctcctttgcctgcttgctggcaaaaaggcc 14490696

                                                                            
Query: 276      tacaacaatgtcctccttcgccataatgtgttctgcattttgcaaattgctgctggaagg 335
                |||||||||||    ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 14490697 tacaacaatgtatatcttcgacataatgtgttctgcatattgcaaattgctgctggaagg 14490756
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>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1585_D02
          Length = 103172

 Score =  125 bits (63), Expect = 1e-25
 Identities = 117/134 (87%), Gaps = 1/134 (0%)
 Strand = Plus / Plus

                                                                         
Query: 19    catggataaaccatggcaaagtncgaatagaagctagcagggttcttcttgatcttgagc 78
             |||||| ||||||||| ||||| ||||| |||||| ||||||||||| ||||||| ||| 
Sbjct: 89930 catggacaaaccatgg-aaagttcgaatggaagctggcagggttcttattgatctcgagt 89988

                                                                         
Query: 79    ttcaccataaagggctagatgcagctctcttgttgttcttgaaatatacagatgaagaaa 138
             ||||||||||||| || ||||||||||| || || |||||||||||| |  |||||||||
Sbjct: 89989 ttcaccataaaggacttgatgcagctcttttattattcttgaaatatgctaatgaagaaa 90048

                           
Query: 139   gatctttgcgaggt 152
             |||||||| |||||
Sbjct: 90049 gatctttgagaggt 90062



 Score =  111 bits (56), Expect = 2e-21
 Identities = 149/180 (82%)
 Strand = Plus / Plus

                                                                         
Query: 156   acaaagttggctgttcatgtcttgcgcatatgccaagcaaatattgaatctaaccttact 215
             ||||||||||||||||||||||||||  |||||||||| |||||||||||| |   || |
Sbjct: 90142 acaaagttggctgttcatgtcttgcgtctatgccaagccaatattgaatctcatgataat 90201

                                                                         
Query: 216   gatcagataaaagtaccaacactctttggtctccttcacctgctcagtagcaaaaaagca 275
              |||| ||| || | ||||| ||  |||| ||||||  ||||||   | ||||||| || 
Sbjct: 90202 aatcaaatacaattgccaactctagttggcctcctttgcctgcttgctggcaaaaaggcc 90261

                                                                         
Query: 276   tacaacaatgtcctccttcgccataatgtgttctgcattttgcaaattgctgctggaagg 335
             |||||||||||    ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 90262 tacaacaatgtatatcttcgacataatgtgttctgcatattgcaaattgctgctggaagg 90321
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>emb|CR956360.10| Pig DNA sequence from clone CH242-245E12 on chromosome 7, complete
            sequence
          Length = 185507

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 116  cttgaaatatacagatgaagaaagat 141
            ||||||||||| ||||||||||||||
Sbjct: 5868 cttgaaatatatagatgaagaaagat 5843
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>ref|XM_474446.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2466

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 100  cagctctcttgttgttcttgaaatataca 128
            ||||| ||||| |||||||||||||||||
Sbjct: 2230 cagctttcttgatgttcttgaaatataca 2202
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>ref|XM_472502.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2418

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 100  cagctctcttgttgttcttgaaatataca 128
            ||||| ||||| |||||||||||||||||
Sbjct: 2182 cagctttcttgatgttcttgaaatataca 2154
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>ref|XM_471771.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2577

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 100  cagctctcttgttgttcttgaaatataca 128
            ||||| ||||| |||||||||||||||||
Sbjct: 2341 cagctttcttgatgttcttgaaatataca 2313
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>gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0069E11, complete sequence
          Length = 136959

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 96440 cagctttcttgatgttcttgaaatataca 96468
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>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11,
             complete sequence
          Length = 103615

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 20061 cagctttcttgatgttcttgaaatataca 20033
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>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21,
              complete sequence
          Length = 139074

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 100    cagctctcttgttgttcttgaaatataca 128
              ||||| ||||| |||||||||||||||||
Sbjct: 106134 cagctttcttgatgttcttgaaatataca 106106
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>gb|AY811840.1| Schistosoma japonicum SJCHGC03025 protein mRNA, partial cds
          Length = 460

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 95  agatgcagctctcttgttgttcttg 119
           |||||||| ||||||||||||||||
Sbjct: 295 agatgcagatctcttgttgttcttg 271
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 100     cagctctcttgttgttcttgaaatataca 128
               ||||| ||||| |||||||||||||||||
Sbjct: 1364945 cagctttcttgatgttcttgaaatataca 1364917
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>emb|CT009736.8| Mouse DNA sequence from clone RP23-99F22 on chromosome 17, complete
              sequence
          Length = 210326

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 244    gtctccttcacctgctcagta 264
              |||||||||||||||||||||
Sbjct: 129252 gtctccttcacctgctcagta 129272
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>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09,
             complete sequence
          Length = 146506

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 10368 cagctttcttgatgttcttgaaatataca 10340
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>emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033H08,
           complete sequence
          Length = 141899

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 100 cagctctcttgttgttcttgaaatataca 128
           ||||| ||||| |||||||||||||||||
Sbjct: 346 cagctttcttgatgttcttgaaatataca 374
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>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete
             sequence
          Length = 155196

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 298   ataatgtgttctgcattttgc 318
             |||||||||||||||||||||
Sbjct: 44749 ataatgtgttctgcattttgc 44729
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>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 26448 cagctttcttgatgttcttgaaatataca 26420
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 100      cagctctcttgttgttcttgaaatataca 128
                ||||| ||||| |||||||||||||||||
Sbjct: 35234235 cagctttcttgatgttcttgaaatataca 35234207



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 100      cagctctcttgttgttcttgaaatataca 128
                ||||| ||||| |||||||||||||||||
Sbjct: 14172601 cagctttcttgatgttcttgaaatataca 14172573



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 100     cagctctcttgttgttcttgaaatataca 128
               ||||| ||||| |||||||||||||||||
Sbjct: 2889143 cagctttcttgatgttcttgaaatataca 2889171
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 100      cagctctcttgttgttcttgaaatataca 128
                ||||| ||||| |||||||||||||||||
Sbjct: 18816976 cagctttcttgatgttcttgaaatataca 18816948
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 100     cagctctcttgttgttcttgaaatataca 128
               ||||| ||||| |||||||||||||||||
Sbjct: 8417514 cagctttcttgatgttcttgaaatataca 8417542



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 100      cagctctcttgttgttcttgaaatatac 127
                ||||| ||||| ||||||||||||||||
Sbjct: 25319862 cagctttcttgatgttcttgaaatatac 25319889
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 100      cagctctcttgttgttcttgaaatataca 128
                ||||| ||||| |||||||||||||||||
Sbjct: 14638360 cagctttcttgatgttcttgaaatataca 14638332



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 275      atacaacaatgtcctccttc 294
                ||||||||||||||||||||
Sbjct: 26111695 atacaacaatgtcctccttc 26111714



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 101      agctctcttgttgttcttgaaatataca 128
                |||| ||||| |||||||||||||||||
Sbjct: 23766831 agctttcttgatgttcttgaaatataca 23766858
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 100      cagctctcttgttgttcttgaaatataca 128
                ||||| ||||| |||||||||||||||||
Sbjct: 14270986 cagctttcttgatgttcttgaaatataca 14270958
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 100      cagctctcttgttgttcttgaaatataca 128
                ||||| ||||| |||||||||||||||||
Sbjct: 19020822 cagctttcttgatgttcttgaaatataca 19020794



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 100     cagctctcttgttgttcttgaaatataca 128
               ||||| ||||| |||||||||||||||||
Sbjct: 8229014 cagctttcttgatgttcttgaaatataca 8229042
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 100      cagctctcttgttgttcttgaaatataca 128
                ||||| ||||| |||||||||||||||||
Sbjct: 18138879 cagctttcttgatgttcttgaaatataca 18138851
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 100     cagctctcttgttgttcttgaaatataca 128
               ||||| ||||| |||||||||||||||||
Sbjct: 1364943 cagctttcttgatgttcttgaaatataca 1364915
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 100    cagctctcttgttgttcttgaaatataca 128
              ||||| ||||| |||||||||||||||||
Sbjct: 327736 cagctttcttgatgttcttgaaatataca 327764
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>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0009J19
          Length = 156988

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 100    cagctctcttgttgttcttgaaatataca 128
              ||||| ||||| |||||||||||||||||
Sbjct: 113492 cagctttcttgatgttcttgaaatataca 113464
to top
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 56520 cagctttcttgatgttcttgaaatataca 56548
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>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0624H09
          Length = 158719

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 100    cagctctcttgttgttcttgaaatataca 128
              ||||| ||||| |||||||||||||||||
Sbjct: 121377 cagctttcttgatgttcttgaaatataca 121405
to top
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0603C10
          Length = 187620

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 22519 cagctttcttgatgttcttgaaatataca 22547
to top
>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1616_B03
          Length = 96081

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 18306 cagctttcttgatgttcttgaaatataca 18278
to top
>dbj|AP003737.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1051_D12
          Length = 144262

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 21297 cagctttcttgatgttcttgaaatataca 21269
to top
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0067K15
          Length = 160162

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 100    cagctctcttgttgttcttgaaatataca 128
              ||||| ||||| |||||||||||||||||
Sbjct: 155867 cagctttcttgatgttcttgaaatataca 155839
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>dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0474F07
          Length = 136440

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 76064 cagctttcttgatgttcttgaaatataca 76036
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>gb|AC154342.2| Mus musculus BAC clone RP23-227D10 from 17, complete sequence
          Length = 199709

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 244    gtctccttcacctgctcagta 264
              |||||||||||||||||||||
Sbjct: 165029 gtctccttcacctgctcagta 165049
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 100     cagctctcttgttgttcttgaaatataca 128
               ||||| ||||| |||||||||||||||||
Sbjct: 8488277 cagctttcttgatgttcttgaaatataca 8488305



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 100      cagctctcttgttgttcttgaaatatac 127
                ||||| ||||| ||||||||||||||||
Sbjct: 25638532 cagctttcttgatgttcttgaaatatac 25638559
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 100      cagctctcttgttgttcttgaaatataca 128
                ||||| ||||| |||||||||||||||||
Sbjct: 18743203 cagctttcttgatgttcttgaaatataca 18743175
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>emb|AL954153.6|CNS08CCR Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0060B11
            of library OSJNBb from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 109192

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 100  cagctctcttgttgttcttgaaatataca 128
            ||||| ||||| |||||||||||||||||
Sbjct: 2626 cagctttcttgatgttcttgaaatataca 2654
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>emb|AL663004.3|OSJN00207 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0049I21,
             complete sequence
          Length = 141935

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 21029 cagctttcttgatgttcttgaaatataca 21057
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
             complete sequence
          Length = 173770

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 100   cagctctcttgttgttcttgaaatataca 128
             ||||| ||||| |||||||||||||||||
Sbjct: 30080 cagctttcttgatgttcttgaaatataca 30052
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>emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on chromosome X, complete
              sequence
          Length = 227395

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     tcttgagcttcaccataaagg 91
              |||||||||||||||||||||
Sbjct: 177209 tcttgagcttcaccataaagg 177189
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>ref|XM_416738.1| PREDICTED: Gallus gallus similar to probable dual-specificity
            Ser/Thr/Tyr kinase (LOC418529), mRNA
          Length = 2619

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 259  tcagtagcaaaaaagcatacaaca 282
            ||||||| ||||||||||||||||
Sbjct: 2518 tcagtagaaaaaaagcatacaaca 2495
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>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence
          Length = 209820

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   aaatatacagatgaagaaag 139
             ||||||||||||||||||||
Sbjct: 96625 aaatatacagatgaagaaag 96644
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>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0029P13, complete sequence
          Length = 158506

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 100   cagctctcttgttgttcttgaaatatac 127
             ||||| ||||| ||||||||||||||||
Sbjct: 46875 cagctttcttgatgttcttgaaatatac 46902
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>gb|AC135114.4| Mus musculus BAC clone RP24-69H7 from chromosome 14, complete sequence
          Length = 181062

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     cttcttgatcttgagcttca 82
              ||||||||||||||||||||
Sbjct: 170874 cttcttgatcttgagcttca 170855
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>gb|AC122933.4| Mus musculus BAC clone RP23-18P3 from 14, complete sequence
          Length = 224941

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    cttcttgatcttgagcttca 82
             ||||||||||||||||||||
Sbjct: 14407 cttcttgatcttgagcttca 14388
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>gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0051D10, complete sequence
          Length = 140272

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 100   cagctctcttgttgttcttgaaatatac 127
             ||||| ||||| ||||||||||||||||
Sbjct: 25880 cagctttcttgatgttcttgaaatatac 25853
to top
>gb|AC144710.2| Danio rerio clone CH211-215E4, complete sequence
          Length = 193226

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   agcaaaaaagcatacaacaa 283
             ||||||||||||||||||||
Sbjct: 71501 agcaaaaaagcatacaacaa 71520
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>ref|XM_779409.1| PREDICTED: Strongylocentrotus purpuratus similar to PDZ domain
            containing 3 (LOC579286), mRNA
          Length = 9591

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 64   ttcttgatcttgagcttcaccata 87
            ||||||||||| ||||||||||||
Sbjct: 9512 ttcttgatctttagcttcaccata 9489
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>gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181829

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    catggataaaccatggcaaa 38
             ||||||||||||||||||||
Sbjct: 24375 catggataaaccatggcaaa 24356
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>emb|BX537275.8| Zebrafish DNA sequence from clone DKEYP-120E12 in linkage group 11,
            complete sequence
          Length = 173631

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 264  agcaaaaaagcatacaacaa 283
            ||||||||||||||||||||
Sbjct: 8491 agcaaaaaagcatacaacaa 8510
to top
>emb|CR387497.1| Gallus gallus finished cDNA, clone ChEST142b23
          Length = 1609

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 259  tcagtagcaaaaaagcatacaaca 282
            ||||||| ||||||||||||||||
Sbjct: 1508 tcagtagaaaaaaagcatacaaca 1485
to top
>gb|AF240628.2|AF240628 Homo sapiens chromosome 21 clone B292N6 map 21q21, complete sequence
          Length = 177273

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  aaatattgaatctaacctta 213
            ||||||||||||||||||||
Sbjct: 5631 aaatattgaatctaacctta 5612
to top
>emb|BX664738.14| Zebrafish DNA sequence from clone DKEY-240A9 in linkage group 8,
             complete sequence
          Length = 180024

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   agcaaaaaagcatacaacaa 283
             ||||||||||||||||||||
Sbjct: 33783 agcaaaaaagcatacaacaa 33764
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>emb|BX537269.8| Zebrafish DNA sequence from clone DKEY-181H1 in linkage group 11,
             complete sequence
          Length = 73125

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   agcaaaaaagcatacaacaa 283
             ||||||||||||||||||||
Sbjct: 32333 agcaaaaaagcatacaacaa 32352
to top
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0092C08
          Length = 131049

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 101   agctctcttgttgttcttgaaatataca 128
             |||| ||||| |||||||||||||||||
Sbjct: 56031 agctttcttgatgttcttgaaatataca 56058
to top
>dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15, map 22, complete
              sequences
          Length = 159919

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    aaatattgaatctaacctta 213
              ||||||||||||||||||||
Sbjct: 108775 aaatattgaatctaacctta 108756
to top
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1191_A10
          Length = 140643

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   atacaacaatgtcctccttc 294
             ||||||||||||||||||||
Sbjct: 55626 atacaacaatgtcctccttc 55645
to top
>gb|AF111709.1|AF111709 Oryza sativa subsp. indica Retrosat 1 retrotransposon and Ty3-Gypsy
             type Retrosat 2 retrotransposon, complete sequences; and
             unknown genes
          Length = 52684

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 101   agctctcttgttgttcttgaaatataca 128
             |||| ||||| |||||||||||||||||
Sbjct: 22722 agctttcttgatgttcttgaaatataca 22695
to top
>dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, section 22/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    aaatattgaatctaacctta 213
              ||||||||||||||||||||
Sbjct: 230167 aaatattgaatctaacctta 230148
to top
>emb|AL806528.14| Mouse DNA sequence from clone RP23-190C17 on chromosome 2, complete
              sequence
          Length = 214642

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    ctccttcacctgctcagtag 265
              ||||||||||||||||||||
Sbjct: 141581 ctccttcacctgctcagtag 141562
to top
>gb|AC164612.4| Mus musculus BAC clone RP23-361B11 from chromosome 9, complete sequence
          Length = 202803

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    agttggctgttcatgtcttg 179
              ||||||||||||||||||||
Sbjct: 112956 agttggctgttcatgtcttg 112937
to top
>dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B66B12,
             LL56-APP region, complete sequence
          Length = 173915

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   aaatattgaatctaacctta 213
             ||||||||||||||||||||
Sbjct: 52760 aaatattgaatctaacctta 52741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,646,972
Number of Sequences: 3902068
Number of extensions: 3646972
Number of successful extensions: 76038
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75600
Number of HSP's gapped (non-prelim): 434
length of query: 350
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 328
effective length of database: 17,147,199,772
effective search space: 5624281525216
effective search space used: 5624281525216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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