>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05,
              complete sequence
          Length = 196284

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 236    acaccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagc 295
              ||||| ||||||||||||| || ||| |||  ||||||||||| ||||||||||  ||||
Sbjct: 113093 acaccatcgtcgaggaggcagaagggaggcatatcaccaaccaagggatgctcccgcagc 113034

                   
Query: 296    tcaag 300
              |||||
Sbjct: 113033 tcaag 113029



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                          
Query: 242    tcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctcaaga 301
              |||||||||||||||| ||||||| | |||  ||||| ||||||||||  ||||||||||
Sbjct: 121405 tcgtcgaggaggctgaagggcggcacgtcagaaaccaagggatgctccagcagctcaaga 121346



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                          
Query: 237    caccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagct 296
              ||||||||||||||| |||||   |||||   |||| ||||| |||||| ||||||||||
Sbjct: 117801 caccgtcgtcgaggaagctgagcagcggcatgtcacgaaccatgggatgatccgtcagct 117742

               
Query: 297    c 297
              |
Sbjct: 117741 c 117741

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 236      acaccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagc 295
                ||||| ||||||||||||| || ||| |||  ||||||||||| ||||||||||  ||||
Sbjct: 26262045 acaccatcgtcgaggaggcagaagggaggcatatcaccaaccaagggatgctcccgcagc 26261986

                     
Query: 296      tcaag 300
                |||||
Sbjct: 26261985 tcaag 26261981



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 242      tcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctcaaga 301
                |||||||||||||||| ||||||| | |||  ||||| ||||||||||  ||||||||||
Sbjct: 26270357 tcgtcgaggaggctgaagggcggcacgtcagaaaccaagggatgctccagcagctcaaga 26270298



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                            
Query: 237      caccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagct 296
                ||||||||||||||| |||||   |||||   |||| ||||| |||||| ||||||||||
Sbjct: 26266753 caccgtcgtcgaggaagctgagcagcggcatgtcacgaaccatgggatgatccgtcagct 26266694

                 
Query: 297      c 297
                |
Sbjct: 26266693 c 26266693

>ref|NM_191805.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1467

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 243 cgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctc 297
           |||||||||||| || | ||||| |||||||||| |||  |||||||| ||||||
Sbjct: 141 cgtcgaggaggccgaggcgcggcacatcaccaacaaggccatgctccggcagctc 195

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                       
Query: 243      cgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctc 297
                |||||||||||| || | ||||| |||||||||| |||  |||||||| ||||||
Sbjct: 30052678 cgtcgaggaggccgaggcgcggcacatcaccaacaaggccatgctccggcagctc 30052732

>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 243   cgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctc 297
             |||||||||||| || | ||||| |||||||||| |||  |||||||| ||||||
Sbjct: 48668 cgtcgaggaggccgaggcgcggcacatcaccaacaaggccatgctccggcagctc 48722

>dbj|AK105712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E11, full
           insert sequence
          Length = 1607

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 243 cgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagctc 297
           |||||||||||| || | ||||| |||||||||| |||  |||||||| ||||||
Sbjct: 159 cgtcgaggaggccgaggcgcggcacatcaccaacaaggccatgctccggcagctc 213

>ref|XM_475753.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1464

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 237 caccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagct 296
           ||||||||||||||| |||||   |||||   |||| ||||| |||||| ||||||||||
Sbjct: 171 caccgtcgtcgaggaagctgagcagcggcatgtcacgaaccatgggatgatccgtcagct 230

            
Query: 297 c 297
           |
Sbjct: 231 c 231

>ref|NM_194761.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0013J21.20), mRNA
          Length = 1443

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 244 gtcgaggaggctgatgggcggcgcatcac 272
           |||||||||||||| ||||||| ||||||
Sbjct: 142 gtcgaggaggctgaggggcggcacatcac 170

>ref|NM_194754.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0013J21.13), mRNA
          Length = 1461

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 241 gtcgtcgaggaggctgatgggcggcgcatcaccaacc 277
           |||||||||||||| ||||||||   |||||||||||
Sbjct: 139 gtcgtcgaggaggcagatgggcgatacatcaccaacc 175

>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21,
              complete sequence
          Length = 155290

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 244    gtcgaggaggctgatgggcggcgcatcac 272
              |||||||||||||| ||||||| ||||||
Sbjct: 126390 gtcgaggaggctgaggggcggcacatcac 126418



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 241   gtcgtcgaggaggctgatgggcggcgcatcaccaacc 277
             |||||||||||||| ||||||||   |||||||||||
Sbjct: 86132 gtcgtcgaggaggcagatgggcgatacatcaccaacc 86168



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 241    gtcgtcgaggaggctgatgggcggcgcatcaccaac 276
              |||||||||||||| ||||||||   ||||||||||
Sbjct: 104267 gtcgtcgaggaggcggatgggcgatacatcaccaac 104302

>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 244     gtcgaggaggctgatgggcggcgcatcac 272
               |||||||||||||| ||||||| ||||||
Sbjct: 2148250 gtcgaggaggctgaggggcggcacatcac 2148278



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 241     gtcgtcgaggaggctgatgggcggcgcatcaccaacc 277
               |||||||||||||| ||||||||   |||||||||||
Sbjct: 2107992 gtcgtcgaggaggcagatgggcgatacatcaccaacc 2108028



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 241     gtcgtcgaggaggctgatgggcggcgcatcaccaac 276
               |||||||||||||| ||||||||   ||||||||||
Sbjct: 2126127 gtcgtcgaggaggcggatgggcgatacatcaccaac 2126162

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 244     gtcgaggaggctgatgggcggcgcatcac 272
               |||||||||||||| ||||||| ||||||
Sbjct: 2148250 gtcgaggaggctgaggggcggcacatcac 2148278



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 241     gtcgtcgaggaggctgatgggcggcgcatcaccaacc 277
               |||||||||||||| ||||||||   |||||||||||
Sbjct: 2107992 gtcgtcgaggaggcagatgggcgatacatcaccaacc 2108028



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 239     ccgtcgtcgaggaggctgat 258
               ||||||||||||||||||||
Sbjct: 2972346 ccgtcgtcgaggaggctgat 2972327



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 241     gtcgtcgaggaggctgatgggcggcgcatcaccaac 276
               |||||||||||||| ||||||||   ||||||||||
Sbjct: 2126127 gtcgtcgaggaggcggatgggcgatacatcaccaac 2126162

>dbj|AK107660.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-G09, full
           insert sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 237 caccgtcgtcgaggaggctgatgggcggcgcatcaccaaccaggggatgctccgtcagct 296
           ||||||||||||||| |||||   |||||   |||| ||||| |||||| ||||||||||
Sbjct: 232 caccgtcgtcgaggaagctgagcagcggcatgtcacgaaccatgggatgatccgtcagct 291

            
Query: 297 c 297
           |
Sbjct: 292 c 292

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 244     gtcgaggaggctgatgggcggcgcatcac 272
               |||||||||||||| ||||||| ||||||
Sbjct: 2148201 gtcgaggaggctgaggggcggcacatcac 2148229



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 241     gtcgtcgaggaggctgatgggcggcgcatcaccaacc 277
               |||||||||||||| ||||||||   |||||||||||
Sbjct: 2107943 gtcgtcgaggaggcagatgggcgatacatcaccaacc 2107979



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 239     ccgtcgtcgaggaggctgat 258
               ||||||||||||||||||||
Sbjct: 2972267 ccgtcgtcgaggaggctgat 2972248



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 241     gtcgtcgaggaggctgatgggcggcgcatcaccaac 276
               |||||||||||||| ||||||||   ||||||||||
Sbjct: 2126078 gtcgtcgaggaggcggatgggcgatacatcaccaac 2126113

>ref|NM_194756.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0013J21.15), mRNA
          Length = 1353

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 241 gtcgtcgaggaggctgatgggcggcgcatcaccaac 276
           |||||||||||||| ||||||||   ||||||||||
Sbjct: 142 gtcgtcgaggaggcggatgggcgatacatcaccaac 177

>ref|NM_194166.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1566

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 316 atgtacacaggccactacattcttgacgccttgagattcc 355
           ||||||| |||  |||||||||||||| |||| |||||||
Sbjct: 223 atgtacagagggtactacattcttgactccttcagattcc 262

>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence
          Length = 134553

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   ccgtcgtcgaggaggctgat 258
             ||||||||||||||||||||
Sbjct: 60768 ccgtcgtcgaggaggctgat 60749

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 316    atgtacacaggccactacattcttgacgccttgagattcc 355
              ||||||| |||  |||||||||||||| |||| |||||||
Sbjct: 965199 atgtacagagggtactacattcttgactccttcagattcc 965160

>gb|AC097709.3| Homo sapiens BAC clone RP11-19B4 from 4, complete sequence
          Length = 160741

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    agacactgaggcaaggaatg 318
              ||||||||||||||||||||
Sbjct: 101044 agacactgaggcaaggaatg 101025

>gb|AC108029.3| Homo sapiens BAC clone RP11-88J6 from 4, complete sequence
          Length = 70132

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   agacactgaggcaaggaatg 318
             ||||||||||||||||||||
Sbjct: 36683 agacactgaggcaaggaatg 36702

>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1119_A04
          Length = 128906

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 316   atgtacacaggccactacattcttgacgccttgagattcc 355
             ||||||| |||  |||||||||||||| |||| |||||||
Sbjct: 69546 atgtacagagggtactacattcttgactccttcagattcc 69507

>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204618

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    tgaggcaaggaatgtacaca 324
              ||||||||||||||||||||
Sbjct: 137221 tgaggcaaggaatgtacaca 137240


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,380,982
Number of Sequences: 3902068
Number of extensions: 2380982
Number of successful extensions: 54824
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 54681
Number of HSP's gapped (non-prelim): 143
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)