ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal12f22 |
|---|---|
| Clone Library Name | barley_pub |
>UBP14_HUMAN (P54578) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 493 Score = 87.8 bits (216), Expect = 7e-18 Identities = 38/71 (53%), Positives = 54/71 (76%) Frame = +1 Query: 46 MLTVCIKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTL 225 + +V +KW K+ F G+E++T +PP+VFK QL+ LTGV P RQK+MVKGG LKDD DW + Sbjct: 2 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNI 60 Query: 226 GLKDGQKLMMI 258 +K+G L+M+ Sbjct: 61 KIKNGMTLLMM 71
>UBP14_PANTR (P60051) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 87.8 bits (216), Expect = 7e-18 Identities = 38/71 (53%), Positives = 54/71 (76%) Frame = +1 Query: 46 MLTVCIKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTL 225 + +V +KW K+ F G+E++T +PP+VFK QL+ LTGV P RQK+MVKGG LKDD DW + Sbjct: 2 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNI 60 Query: 226 GLKDGQKLMMI 258 +K+G L+M+ Sbjct: 61 KIKNGMTLLMM 71
>UBP14_MOUSE (Q9JMA1) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 86.7 bits (213), Expect = 1e-17 Identities = 37/71 (52%), Positives = 54/71 (76%) Frame = +1 Query: 46 MLTVCIKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTL 225 + +V +KW K+ F G+E++T +PP+VFK QL+ LTGV P RQK+MVKGG LKDD DW + Sbjct: 2 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNI 60 Query: 226 GLKDGQKLMMI 258 +K+G ++M+ Sbjct: 61 KMKNGMTVLMM 71
>UBP14_RABIT (P40826) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 492 Score = 85.5 bits (210), Expect = 3e-17 Identities = 36/71 (50%), Positives = 54/71 (76%) Frame = +1 Query: 46 MLTVCIKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTL 225 + +V +KW K+ F G+E++T +PP+VFK QL+ LTGV P RQ++MVKGG LKDD DW + Sbjct: 2 LYSVTVKWGKEKFGGVELNTDEPPMVFKAQLFALTGVQPARQRVMVKGGTLKDD-DWGNI 60 Query: 226 GLKDGQKLMMI 258 +K+G ++M+ Sbjct: 61 KIKNGMTILMM 71
>UBP14_CAEEL (Q17361) Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15)| (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14) Length = 489 Score = 70.1 bits (170), Expect = 1e-12 Identities = 34/71 (47%), Positives = 49/71 (69%) Frame = +1 Query: 46 MLTVCIKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTL 225 M V +KWQK+ + +E+DTS PP+VFK QL+ LT V PERQK+++ G L DD DW + Sbjct: 1 MPIVNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDD-DWEGI 58 Query: 226 GLKDGQKLMMI 258 +K+ +MM+ Sbjct: 59 TIKENMTIMMM 69
>UBP6_SCHPO (Q92353) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thiolesterase 6) (Ubiquitin-specific processing protease 6) (Deubiquitinating enzyme 6) Length = 467 Score = 63.9 bits (154), Expect = 1e-10 Identities = 31/71 (43%), Positives = 48/71 (67%) Frame = +1 Query: 46 MLTVCIKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTL 225 M+ + I+WQ + + +EI+ ++ K QLY+LT VPPERQK++VKGG LKDD ++ Sbjct: 1 MIPIAIRWQGKKYD-LEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSV 59 Query: 226 GLKDGQKLMMI 258 G+K L+M+ Sbjct: 60 GIKPNATLLMM 70
>BAG1_HUMAN (Q99933) BAG family molecular chaperone regulator 1 (BCL-2-binding| athanogene-1) (BAG-1) (Glucocorticoid receptor-associated protein RAP46) Length = 274 Score = 33.9 bits (76), Expect = 0.11 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%) Frame = +1 Query: 103 TSQPPVVFKTQLYT-LTGVPPERQKIMVKGGILKD-DTDWSTLGLKDGQKLMMI 258 +S+P V Q+ + GVP QK++ KG LK+ +T S LG++DG ++M+I Sbjct: 94 SSEPVVQDLAQVVEEVIGVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLI 147
>UBP6_YEAST (P43593) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) Length = 499 Score = 33.5 bits (75), Expect = 0.15 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = +1 Query: 61 IKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTLGLKDG 240 I+ +V+P I + T K++ LT VP RQK MVKGG+ +++ +K G Sbjct: 10 IRHSGKVYP-ITLSTDATSADLKSKAEELTQVPSARQKYMVKGGLSGEESIKIYPLIKPG 68 Query: 241 QKLMMI 258 +M++ Sbjct: 69 STVMLL 74
>DSK2_YEAST (P48510) Ubiquitin domain-containing protein DSK2| Length = 373 Score = 33.5 bits (75), Expect = 0.15 Identities = 17/65 (26%), Positives = 31/65 (47%) Frame = +1 Query: 64 KWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTLGLKDGQ 243 KW+ V P + + FK + G+P Q+++ G ILKDD + ++DG Sbjct: 13 KWEVNVAPESTV------LQFKEAINKANGIPVANQRLIYSGKILKDDQTVESYHIQDGH 66 Query: 244 KLMMI 258 + ++ Sbjct: 67 SVHLV 71
>BAG1_MOUSE (Q60739) BAG family molecular chaperone regulator 1 (BCL-2-binding| athanogene-1) (BAG-1) Length = 355 Score = 33.1 bits (74), Expect = 0.19 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%) Frame = +1 Query: 106 SQPPVVFKTQLYT-LTGVPPERQKIMVKGGILKD-DTDWSTLGLKDGQKLMMI 258 S+P V QL TGVP QK++ KG LK+ +T S LG+++G ++M+I Sbjct: 176 SEPVVQDLAQLVEEATGVPLPFQKLIFKGKSLKEMETPLSALGMQNGCRVMLI 228
>DSK2_SCHPO (Q10169) Deubiquitination-protection protein dph1| Length = 354 Score = 33.1 bits (74), Expect = 0.19 Identities = 12/56 (21%), Positives = 29/56 (51%) Frame = +1 Query: 91 IEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTLGLKDGQKLMMI 258 + +D+ + K + + + ERQ+++ G +LKD+ T ++DG + ++ Sbjct: 18 VTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDGHSIHLV 73
>RAD23_YEAST (P32628) UV excision repair protein RAD23| Length = 398 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/71 (23%), Positives = 36/71 (50%) Frame = +1 Query: 46 MLTVCIKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTL 225 M+++ K K+ ++++ S + KT+L + K++ G +L+D S Sbjct: 1 MVSLTFKNFKKEKVPLDLEPSNTILETKTKLAQSISCEESQIKLIYSGKVLQDSKTVSEC 60 Query: 226 GLKDGQKLMMI 258 GLKDG +++ + Sbjct: 61 GLKDGDQVVFM 71
>RAD23_ORYSA (Q40742) Putative DNA repair protein RAD23 (OsRAD23)| Length = 392 Score = 28.9 bits (63), Expect = 3.6 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Frame = +1 Query: 91 IEIDTSQPPVVFKTQLYTLTG---VPPERQKIMVKGGILKDDT 210 IE+D++Q K + T G P E+Q ++ +G +LKDDT Sbjct: 15 IEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDT 57
>ISPE_NOVAD (Q2G7F1) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 285 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -1 Query: 128 LKTTGGWLVSISMPGKTCF 72 L+ TGGWL +S G TCF Sbjct: 239 LRQTGGWLTRMSGSGATCF 257
>DHE3_PYRHO (O52310) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -1 Query: 233 LSPKVDQSVSSFNIPPFTIIFCRSGGTPVSVYNWVLKTTG 114 ++P+ D+ + I C +GG VS + WV TG Sbjct: 323 VTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITG 362
>DHE3_PYRFU (P80319) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -1 Query: 233 LSPKVDQSVSSFNIPPFTIIFCRSGGTPVSVYNWVLKTTG 114 ++P+ D+ + I C +GG VS + WV TG Sbjct: 323 VTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITG 362
>DHE3_PYREN (Q47951) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -1 Query: 233 LSPKVDQSVSSFNIPPFTIIFCRSGGTPVSVYNWVLKTTG 114 ++P+ D+ + I C +GG VS + WV TG Sbjct: 323 VTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITG 362
>DHE3_PYRAB (Q47950) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -1 Query: 233 LSPKVDQSVSSFNIPPFTIIFCRSGGTPVSVYNWVLKTTG 114 ++P+ D+ + I C +GG VS + WV TG Sbjct: 323 VTPEADEILFEKGILQIPDFLCNAGGVTVSYFEWVQNITG 362
>UBL1_SCHPO (O14399) Ubiquitin-like protein 1| Length = 78 Score = 28.5 bits (62), Expect = 4.7 Identities = 13/56 (23%), Positives = 29/56 (51%) Frame = +1 Query: 91 IEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTLGLKDGQKLMMI 258 ++ID + K ++ G+PP +Q+++ G + DD + + L+ G L ++ Sbjct: 15 LDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLV 70
>RUB3_ARATH (O65381) NEDD8-like protein RUB3 precursor (Ubiquitin-related| protein 3) (AtRUB3) Length = 78 Score = 28.1 bits (61), Expect = 6.2 Identities = 18/63 (28%), Positives = 30/63 (47%) Frame = +1 Query: 70 QKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTLGLKDGQKL 249 +KQ+ IEI+ + K ++ G+PP Q+I+ G L DD L+ G L Sbjct: 10 EKQI--DIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVL 67 Query: 250 MMI 258 ++ Sbjct: 68 HLV 70
>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated| protein 114) (SAP 114) (SF3a120) Length = 793 Score = 28.1 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = +1 Query: 121 VFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTLGLKDG 240 V K +++ TG+P +QK+ +G +KD + + +G Sbjct: 739 VIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANG 778
>DLTA_STAAU (P68877) D-alanine--poly(phosphoribitol) ligase subunit 1 (EC| 6.1.1.13) (D-alanine-activating enzyme) (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) Length = 485 Score = 27.7 bits (60), Expect = 8.1 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +1 Query: 76 QVFPGIEIDTSQPPVVFKTQL------YTL--TGVPPERQKIMVKGGILKDDTDWSTLGL 231 +VF +I TSQ PV+F +Q+ YT+ +G E + + ++ L T+W Sbjct: 113 EVFTIEDIKTSQDPVIFDSQIKDNDTVYTIFTSGSTGEPKGVQIEYASLVQFTEWMLELN 172 Query: 232 KDGQK 246 K G K Sbjct: 173 KSGNK 177
>DLTA_STAAN (P99107) D-alanine--poly(phosphoribitol) ligase subunit 1 (EC| 6.1.1.13) (D-alanine-activating enzyme) (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) Length = 485 Score = 27.7 bits (60), Expect = 8.1 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +1 Query: 76 QVFPGIEIDTSQPPVVFKTQL------YTL--TGVPPERQKIMVKGGILKDDTDWSTLGL 231 +VF +I TSQ PV+F +Q+ YT+ +G E + + ++ L T+W Sbjct: 113 EVFTIEDIKTSQDPVIFDSQIKDNDTVYTIFTSGSTGEPKGVQIEYASLVQFTEWMLELN 172 Query: 232 KDGQK 246 K G K Sbjct: 173 KSGNK 177
>DLTA_STAAM (P68876) D-alanine--poly(phosphoribitol) ligase subunit 1 (EC| 6.1.1.13) (D-alanine-activating enzyme) (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) Length = 485 Score = 27.7 bits (60), Expect = 8.1 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +1 Query: 76 QVFPGIEIDTSQPPVVFKTQL------YTL--TGVPPERQKIMVKGGILKDDTDWSTLGL 231 +VF +I TSQ PV+F +Q+ YT+ +G E + + ++ L T+W Sbjct: 113 EVFTIEDIKTSQDPVIFDSQIKDNDTVYTIFTSGSTGEPKGVQIEYASLVQFTEWMLELN 172 Query: 232 KDGQK 246 K G K Sbjct: 173 KSGNK 177
>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) (Protein G3) Length = 1132 Score = 27.7 bits (60), Expect = 8.1 Identities = 14/60 (23%), Positives = 26/60 (43%) Frame = +1 Query: 28 AADSPAMLTVCIKWQKQVFPGIEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDD 207 A + P L V +K + FK + +P E+Q+++ +G +L+DD Sbjct: 10 AVEEPDSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDD 69
>TBCB_YEAST (P53904) Tubulin-specific chaperone B (Tubulin folding cofactor B)| (Alpha-tubulin formation protein 1) Length = 254 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = +1 Query: 124 FKTQLYTLTGVPPERQKIMVK 186 FK +LY +TGV PE +I+VK Sbjct: 26 FKDRLYHVTGVEPEDMEIVVK 46
>DHE3_THELI (Q56304) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 418 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/41 (29%), Positives = 19/41 (46%) Frame = -1 Query: 230 SPKVDQSVSSFNIPPFTIIFCRSGGTPVSVYNWVLKTTGGW 108 +P+ D+ + I C +GG VS + WV TG + Sbjct: 322 TPEADEILYEKGILIIPDFLCNAGGVTVSYFEWVQNITGDY 362
>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)| Length = 791 Score = 27.7 bits (60), Expect = 8.1 Identities = 11/40 (27%), Positives = 21/40 (52%) Frame = +1 Query: 121 VFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTLGLKDG 240 V K +++ TG+P +QK+ +G +KD + + G Sbjct: 737 VIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASG 776
>UCRP_MOUSE (Q64339) Ubiquitin cross-reactive protein precursor| (Interferon-stimulated protein 15) (IP17) Length = 160 Score = 27.7 bits (60), Expect = 8.1 Identities = 14/56 (25%), Positives = 27/56 (48%) Frame = +1 Query: 91 IEIDTSQPPVVFKTQLYTLTGVPPERQKIMVKGGILKDDTDWSTLGLKDGQKLMMI 258 + + S K Q+ GVP +Q++ + +L+D S+LGL +M++ Sbjct: 16 VSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLV 71
>DHE3_LYCES (P93541) Glutamate dehydrogenase (EC 1.4.1.3) (GDH) (Legdh1)| Length = 412 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = -1 Query: 227 PKVDQSVSSFNIPPFTIIFCRSGGTPVSVYNWVLKTTG 114 P+ D+ +S + I+ SGG VS + WV G Sbjct: 318 PEADEILSKKGVTILPDIYANSGGVTVSYFEWVQNIQG 355 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,129,953 Number of Sequences: 219361 Number of extensions: 858540 Number of successful extensions: 2236 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 2201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2230 length of database: 80,573,946 effective HSP length: 62 effective length of database: 66,973,564 effective search space used: 1607365536 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
