ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal12f18 |
|---|---|
| Clone Library Name | barley_pub |
>FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 350 Score = 231 bits (589), Expect = 1e-60 Identities = 101/158 (63%), Positives = 135/158 (85%) Frame = +2 Query: 20 RIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVI 199 RIV+YKT+YYSFYLPVACALLL+G L +Y +++N+L+EMG YFQ+QDDYLDC+GDP+ I Sbjct: 193 RIVQYKTAYYSFYLPVACALLLSGENLDNYGDVENILVEMGTYFQVQDDYLDCYGDPEFI 252 Query: 200 GKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFL 379 GK+GTDIEDYKCSWL+VQA+E A+E++ +IL+ENYGK P CV VKN+YKELDL+ +F Sbjct: 253 GKIGTDIEDYKCSWLVVQALERADESQKRILFENYGKKDPACVAKVKNLYKELDLEAVFQ 312 Query: 380 EYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 EYE+ YK L++ I+A+P A++++LK FL KIY+R+K Sbjct: 313 EYENESYKKLIADIEAQPSIAVQKVLKSFLHKIYKRQK 350
>FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 223 bits (567), Expect = 5e-58 Identities = 100/160 (62%), Positives = 131/160 (81%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 +RRIV+YKT+YYSFYLPVACALL+ G L +VE+KNVL+EMG YFQ+QDDYLDCFG P+ Sbjct: 183 HRRIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMGTYFQVQDDYLDCFGAPE 242 Query: 194 VIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDI 373 VIGK+GTDIED+KCSWL+V+A+ELANE + K+L+ENYGK P V VK +Y L+LQ + Sbjct: 243 VIGKIGTDIEDFKCSWLVVKALELANEEQKKVLHENYGKKDPSPVAKVKELYNTLNLQGV 302 Query: 374 FLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 F +YE+ YK L+++I+ P +A++ +LK FL KIYRR+K Sbjct: 303 FEDYENTSYKKLITSIEGHPSKAVQAVLKSFLGKIYRRQK 342
>FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitochondrial| precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 384 Score = 221 bits (563), Expect = 1e-57 Identities = 96/160 (60%), Positives = 131/160 (81%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 +RRIV+YKT+YYSFYLPVACALL+ G L +++++KNVL++MG+YFQ+QDDYLDCF DP+ Sbjct: 225 HRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPE 284 Query: 194 VIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDI 373 +GK+GTDIED+KCSWL+V+A+E +E + KILYENYGK P V VK++YKELDL+ + Sbjct: 285 TLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGV 344 Query: 374 FLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 F+EYES+ Y+ L I+ +AI+ +LK FL KIY+R+K Sbjct: 345 FMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK 384
>FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 221 bits (563), Expect = 1e-57 Identities = 96/160 (60%), Positives = 134/160 (83%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 +RRIV+YKT+YYSFYLPVACALL+ G L +++++KN+L++MG YFQ+QDDYLDCFG P+ Sbjct: 183 HRRIVQYKTAYYSFYLPVACALLMVGENLDNHIDVKNILVDMGTYFQVQDDYLDCFGAPE 242 Query: 194 VIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDI 373 IGK+GTDIED+KCSWL+V+A+EL+N+ + K+LY+NYGK P V VK +Y EL+LQ + Sbjct: 243 TIGKIGTDIEDFKCSWLVVKALELSNDEQKKVLYDNYGKPDPANVAKVKALYDELNLQGV 302 Query: 374 FLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 F EYES+ Y+ LV++I+A P +A++ +LK FL KIY+R+K Sbjct: 303 FTEYESKSYEKLVTSIEAHPSKAVQALLKSFLGKIYKRQK 342
>FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 219 bits (557), Expect = 7e-57 Identities = 98/160 (61%), Positives = 130/160 (81%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 +RRIV+YKT+YYSFYLPVACALL+ G L + E+KNVL+EMG YFQ+QDDYLDCFG P+ Sbjct: 183 HRRIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMGTYFQVQDDYLDCFGAPE 242 Query: 194 VIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDI 373 VIGK+GTDIED+KCSWL+V+A+EL+NE + KIL+ENYGK P V VK +Y L+LQ + Sbjct: 243 VIGKIGTDIEDFKCSWLVVKALELSNEEQKKILHENYGKKDPSSVAKVKELYHTLNLQGV 302 Query: 374 FLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 F +YE+ YK L+++I+ P +A++ +LK FL KIY+R+K Sbjct: 303 FEDYENTSYKKLITSIEGHPSKAVQAVLKSFLGKIYKRQK 342
>FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 343 Score = 218 bits (555), Expect = 1e-56 Identities = 99/160 (61%), Positives = 129/160 (80%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 +RRIV+YKT+YYSFYLPVACALL+ G L +VE+KNVL+EMG YFQ+QDDYLDCFG P+ Sbjct: 184 HRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQDDYLDCFGAPE 243 Query: 194 VIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDI 373 VIGK+GTDIED+KCSWL+V+A+EL NE + K L+ENYGK P V VK VY L+LQ + Sbjct: 244 VIGKIGTDIEDFKCSWLVVKALELPNEEQKKTLHENYGKKDPASVAKVKEVYHTLNLQAV 303 Query: 374 FLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 F +YE+ YK L+++I+ P +A++ +LK FL KIY+R+K Sbjct: 304 FEDYEATSYKKLITSIENHPSKAVQAVLKSFLGKIYKRQK 343
>FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 216 bits (549), Expect = 6e-56 Identities = 96/163 (58%), Positives = 129/163 (79%) Frame = +2 Query: 5 IQGYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFG 184 +Q +RRIV+YKT+YYSFYLPVACALL+ G L ++ ++K VL++MG+YFQ+QDDYLDCF Sbjct: 180 LQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQDDYLDCFA 239 Query: 185 DPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDL 364 DP+ +GK+GTDIED+KCSWL+V+A+E +E + KILYENYGK+ P V VK +YKELDL Sbjct: 240 DPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELDL 299 Query: 365 QDIFLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 + F+EYE Y+ L I+A +AI+ +LK FL KIY+R+K Sbjct: 300 EGAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK 342
>FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 215 bits (548), Expect = 7e-56 Identities = 94/160 (58%), Positives = 129/160 (80%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 +RRIV+YKT+YYSFYLPVACALL+ G L ++ ++KN+L+EMG YFQ+QDDYLDCFG P+ Sbjct: 183 HRRIVQYKTAYYSFYLPVACALLMVGENLDNHTDVKNILVEMGTYFQVQDDYLDCFGAPE 242 Query: 194 VIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDI 373 IGK+GTDIED+KCSWL+V+A+EL+NE + K+LYENYGK P V VK +Y EL+L+ Sbjct: 243 TIGKIGTDIEDFKCSWLVVKALELSNEEQKKVLYENYGKPDPANVAKVKTLYNELNLEGA 302 Query: 374 FLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 + +YES+ Y+ LV+ I+ P +A++ +LK F KIY+R+K Sbjct: 303 YADYESKSYEKLVTCIEGHPSKAVQGVLKSFWAKIYKRQK 342
>FPPS_HELAN (O64905) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 341 Score = 214 bits (545), Expect = 2e-55 Identities = 98/160 (61%), Positives = 130/160 (81%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 +RRIV+YKT+YYSFYLPVACALL+ G L ++VE+KNVL+EMG YFQ+QDDYLDCFG P+ Sbjct: 183 HRRIVQYKTAYYSFYLPVACALLMFGEDLDNHVEVKNVLVEMGTYFQVQDDYLDCFGAPE 242 Query: 194 VIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDI 373 VIGK+GTDIED+ SWL+V+A+ELANE + K+L+ENYGK P V VK +Y L+LQ + Sbjct: 243 VIGKIGTDIEDFS-SWLVVKALELANEEQKKVLHENYGKKDPSSVAKVKELYNTLNLQGV 301 Query: 374 FLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 F +YES YK L+++I+ P +A++ +LK FL KIY+R+K Sbjct: 302 FEDYESTSYKKLITSIEGHPSKAVQAVLKSFLGKIYKRQK 341
>FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 161 bits (408), Expect = 1e-39 Identities = 77/161 (47%), Positives = 108/161 (67%), Gaps = 1/161 (0%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAK-LSDYVELKNVLIEMGVYFQIQDDYLDCFGDP 190 Y+ IVKYKT++YSFYLP+A A+ + G ++ K +L+EMG +FQIQDDYLD FGDP Sbjct: 193 YKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDP 252 Query: 191 QVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQD 370 V GK+GTDI+D KCSWL+VQ ++ A + +IL ENYG+ E V VK +Y+ELDL Sbjct: 253 SVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPA 312 Query: 371 IFLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 +FL+YE Y H+++ I+ + +KIY+R+K Sbjct: 313 VFLQYEEDSYSHIMALIEQYAAPLPPAVFLGLARKIYKRRK 353
>FPPS_CHICK (P08836) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 367 Score = 161 bits (407), Expect = 2e-39 Identities = 76/161 (47%), Positives = 108/161 (67%), Gaps = 1/161 (0%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGA-KLSDYVELKNVLIEMGVYFQIQDDYLDCFGDP 190 Y+ IVKYKT++YSFYLPVA A+ + G ++ K +L+EMG YFQIQDDYLDCFGDP Sbjct: 207 YKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQDDYLDCFGDP 266 Query: 191 QVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQD 370 + GKVGTDI+D KCSWL+VQ ++ + ++L +NYG+ PE V VK +Y+ + ++ Sbjct: 267 ALTGKVGTDIQDNKCSWLVVQCLQRVTPEQRQLLEDNYGRKEPEKVAKVKELYEAVGMRA 326 Query: 371 IFLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 F +YE Y+ L I+ +R +EI +KIY+R+K Sbjct: 327 AFQQYEESSYRRLQELIEKHSNRLPKEIFLGLAQKIYKRQK 367
>FPPS_RAT (P05369) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 157 bits (397), Expect = 2e-38 Identities = 79/161 (49%), Positives = 104/161 (64%), Gaps = 1/161 (0%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAK-LSDYVELKNVLIEMGVYFQIQDDYLDCFGDP 190 Y+ IVKYKT++YSFYLP+A A+ + G ++ +L+EMG +FQIQDDYLD FGDP Sbjct: 193 YKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQIQDDYLDLFGDP 252 Query: 191 QVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQD 370 V GKVGTDI+D KCSWL+VQ + A + +IL ENYG+ PE V VK +Y+ELDL+ Sbjct: 253 SVTGKVGTDIQDNKCSWLVVQCLLRATPQQRQILEENYGQKDPEKVARVKALYEELDLRS 312 Query: 371 IFLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 +F +YE Y L S I+ I KIY+R+K Sbjct: 313 VFFKYEEDSYNRLKSLIEQCSAPLPPSIFLELANKIYKRRK 353
>FPPS_MOUSE (Q920E5) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 155 bits (391), Expect = 1e-37 Identities = 78/161 (48%), Positives = 103/161 (63%), Gaps = 1/161 (0%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAK-LSDYVELKNVLIEMGVYFQIQDDYLDCFGDP 190 Y+ IVKYKT++YSFYLP+A A+ + G ++ +L+EMG +FQ+QDDYLD FGDP Sbjct: 193 YKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQVQDDYLDLFGDP 252 Query: 191 QVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQD 370 V GKVGTDI+D KCSWL+VQ + A+ + +IL ENYG+ PE V VK +Y+ LDLQ Sbjct: 253 SVTGKVGTDIQDNKCSWLVVQCLLRASPQQRQILEENYGQKDPEKVARVKALYEALDLQS 312 Query: 371 IFLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 F +YE Y L S I+ I KIY+R+K Sbjct: 313 AFFKYEEDSYNRLKSLIEQCSAPLPPSIFMELANKIYKRRK 353
>FPPS_GIBFU (Q92235) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 150 bits (378), Expect = 4e-36 Identities = 81/167 (48%), Positives = 112/167 (67%), Gaps = 4/167 (2%) Frame = +2 Query: 5 IQGYRRIVKYKTSYYSFYLPVACAL-LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCF 181 ++ Y IV YKT+YYSFYLPVA AL LN A S+ + +++LI +G YFQIQDDYLD F Sbjct: 182 LEKYSFIVIYKTAYYSFYLPVALALHQLNLATPSNLKQAEDILIPLGEYFQIQDDYLDNF 241 Query: 182 GDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELD 361 G P+ IGK+GTDI+D KCSWL+ QA+ +A + KIL ENYG+ E VK +Y +L+ Sbjct: 242 GKPEHIGKIGTDIKDNKCSWLVNQALAVATPEQRKILEENYGRKDDEKEKVVKKLYDDLN 301 Query: 362 LQDIFLEYESRV---YKHLVSTIDAEPDRAIREILKIFLKKIYRRKK 493 L+ +L+YE +V + ++ ID E D + + + FL KIY+R K Sbjct: 302 LEQRYLDYEEKVVGQIRERIANID-ENDGLKKTVFEAFLAKIYKRSK 347
>FPPS_YEAST (P08524) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 352 Score = 147 bits (372), Expect = 2e-35 Identities = 74/160 (46%), Positives = 105/160 (65%), Gaps = 3/160 (1%) Frame = +2 Query: 23 IVKYKTSYYSFYLPVACALLLNG-AKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVI 199 IV +KT+YYSFYLPVA A+ + G D + ++VLI +G YFQIQDDYLDCFG P+ I Sbjct: 193 IVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQDDYLDCFGTPEQI 252 Query: 200 GKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFL 379 GK+GTDI+D KCSW+I +A+ELA+ + K L ENYGK K ++ +L ++ ++ Sbjct: 253 GKIGTDIQDNKCSWVINKALELASAEQRKTLDENYGKKDSVAEAKCKKIFNDLKIEQLYH 312 Query: 380 EYESRVYKHLVSTI-DAEPDRAIR-EILKIFLKKIYRRKK 493 EYE + K L + I + R + ++L FL K+Y+R K Sbjct: 313 EYEESIAKDLKAKISQVDESRGFKADVLTAFLNKVYKRSK 352
>FPPS_KLULA (P49349) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 349 Score = 140 bits (352), Expect = 4e-33 Identities = 76/160 (47%), Positives = 104/160 (65%), Gaps = 3/160 (1%) Frame = +2 Query: 23 IVKYKTSYYSFYLPVACALLLNGAKLS-DYVELKNVLIEMGVYFQIQDDYLDCFGDPQVI 199 IV +KT+YYSFYL VA A+ G S D + +VLI +G YFQIQDD+LDCFG P+ I Sbjct: 190 IVIFKTAYYSFYLAVALAMFAAGITDSKDLKQASDVLIPLGEYFQIQDDFLDCFGKPEDI 249 Query: 200 GKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFL 379 GK+GTDI+D KCSW+I A++ A + + IL ENYG+ E + V+ EL++QDI+ Sbjct: 250 GKIGTDIQDNKCSWVINVALKNATKEQRDILDENYGRKDSEKEQKCRAVFNELNIQDIYH 309 Query: 380 EYESRVYKHLVSTI-DAEPDRAIR-EILKIFLKKIYRRKK 493 +YE +L I + + R + E+L +FL KIY RKK Sbjct: 310 KYEEETASNLREKIANIDESRGFKAEVLTLFLNKIYHRKK 349
>FPPS_NEUCR (Q92250) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 137 bits (344), Expect = 3e-32 Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 3/163 (1%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACAL-LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDP 190 Y IV YKT+YYSFYLPVA A+ +L+ A + + +++LI +G YFQ+QDDYLD FG P Sbjct: 185 YTFIVIYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQDDYLDNFGLP 244 Query: 191 QVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELDLQD 370 + IGK+GTDI+D KCSWL+ +A+ + + K L ENYG+ +K +Y +L L+D Sbjct: 245 EHIGKIGTDIQDNKCSWLVNKALSIVTPEQRKTLEENYGRKDKAKEAVIKQLYDDLKLED 304 Query: 371 IFLEYESRVYKHLVSTIDA--EPDRAIREILKIFLKKIYRRKK 493 + +YE + IDA E +++ + FL KIY+R K Sbjct: 305 HYKQYEEERVGEIRKMIDAIDESKGLKKQVFEAFLGKIYKRSK 347
>FPPS_SCHPO (O14230) Probable farnesyl pyrophosphate synthetase (FPP| synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 132 bits (333), Expect = 6e-31 Identities = 72/166 (43%), Positives = 100/166 (60%), Gaps = 3/166 (1%) Frame = +2 Query: 5 IQGYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVEL-KNVLIEMGVYFQIQDDYLDCF 181 +Q + IV YKT++YSFYLPVA A+ L G + ++ +++LI +G YFQ+QDDYLDC+ Sbjct: 182 LQKHSFIVIYKTAFYSFYLPVALAMHLAGVATPENLKCAQDILIILGKYFQVQDDYLDCY 241 Query: 182 GDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVKNVYKELD 361 GDP V GK+GTDI D KCSW+I A+ + IL +NYG+ E VK V++EL+ Sbjct: 242 GDPTVTGKIGTDILDNKCSWIINLALAKCTPEQRVILDDNYGRKDSESEKRVKAVFEELN 301 Query: 362 LQDIFLEYESRVYKHLVSTIDA--EPDRAIREILKIFLKKIYRRKK 493 ++ F YE + ID E + I FL KIY+R K Sbjct: 302 IRGEFENYEESEVSEIKKLIDGVDESTGLKKSIFTTFLGKIYKRNK 347
>IDSA_METJA (Q58270) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 327 Score = 52.4 bits (124), Expect = 1e-06 Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 9/140 (6%) Frame = +2 Query: 89 GAKLSDYVE-----LKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIV 250 GA ++D E LK +G+ FQIQDD LD GD + +GK VG+DI + K + +++ Sbjct: 188 GAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVI 247 Query: 251 QAMELANENEMKILYENYGKSS---PECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTI 421 A++ +E++ K L E G + E A++ + ++ ++ ++ K + Sbjct: 248 HALKTLDEDKKKRLLEILGNKNVKDEEIKEAIEILKPSIEYAKELMKQKTEEAKEYLKIF 307 Query: 422 DAEPDRAIREILKIFLKKIY 481 + + + + ++ + +IY Sbjct: 308 NKDRRKVLEDLADFIMSRIY 327
>IDSA_METTH (O26156) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 325 Score = 51.2 bits (121), Expect = 2e-06 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%) Frame = +2 Query: 80 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 256 ++ G + L++ +G+ FQI DDYLD D + +GK VG+DI + K + ++V+A Sbjct: 187 IMGGGSPQEIAALEDYGRCIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKA 246 Query: 257 MELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVS 415 +E A+E + + L G + V + +IF Y + Y H V+ Sbjct: 247 LERASEKDRERLISILGSGDEKLVA---------EAIEIFERYGATEYAHAVA 290
>IDSA_METTM (Q53479) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 324 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 5/137 (3%) Frame = +2 Query: 80 LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQA 256 ++ GA + L++ +G+ FQI DDYLD D + +GK VG+DI + K + ++V+A Sbjct: 186 IMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKA 245 Query: 257 MELANENEMKILYENYGKSSPECVGAVKNVYKELD----LQDIFLEYESRVYKHLVSTID 424 +E A+E + + L G V +++ ++ L+Y + L D Sbjct: 246 LEEASEEDRERLISILGSGDEGSVAEAIEIFERYGATQYAHEVALDYVRMAKERLEILED 305 Query: 425 AEPDRAIREILKIFLKK 475 ++ A+ I L++ Sbjct: 306 SDARDALMRIADFVLER 322
>GGPS_SULAC (P39464) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 330 Score = 48.1 bits (113), Expect = 2e-05 Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 5/167 (2%) Frame = +2 Query: 8 QGYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGD 187 Q Y ++ KT+ F + L+ GA +D + + +G+ FQI DD L D Sbjct: 166 QEYLDMISRKTAAL-FSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTAD 224 Query: 188 PQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENYG--KSSPECVGAVKNVYKEL 358 + +GK V +DI + K + L+++ +EL E+E KI+ + G +S E + + ++ K+ Sbjct: 225 EKELGKPVFSDIREGKKTILVIKTLELCKEDEKKIVLKALGNKSASKEELMSSADIIKKY 284 Query: 359 DLQDIFLEYESRVYKHLVSTIDAEPDRA--IREILKIFLKKIYRRKK 493 L D + YK+ + +++ ++ + LK + RR+K Sbjct: 285 SL-DYAYNLAEKYYKNAIDSLNQVSSKSDIPGKALKYLAEFTIRRRK 330
>GGPS_SULSO (P95999) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 332 Score = 46.6 bits (109), Expect = 6e-05 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 1/99 (1%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 Y +++K KT+ F A ++N A +L + +G+ FQI DD L GD + Sbjct: 170 YIQMIKGKTAML-FSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEK 228 Query: 194 VIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENYG 307 +GK + +DI + K + L+++ + A E+E KIL G Sbjct: 229 ELGKPIYSDIREGKKTILVIKTLSEATEDEKKILVSTLG 267
>ISPB_HAEIN (P44916) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 329 Score = 38.1 bits (87), Expect = 0.021 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 2/150 (1%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQ 193 Y R++ KT+ A A++ G + + L++ +G FQ+ DD LD + Q Sbjct: 169 YMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKA-LQDYGRYLGTAFQLVDDVLDYSANTQ 227 Query: 194 VIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSP-ECVGAVKNVYKELDLQ 367 +GK VG D+ + K + ++ AM N + ++ E + E + V + E Sbjct: 228 ALGKNVGDDLAEGKPTLPLLHAMRHGNAQQAALIREAIEQGGKREAIDEVLAIMTEHKSL 287 Query: 368 DIFLEYESRVYKHLVSTIDAEPDRAIREIL 457 D + + V I+ P+ ++ L Sbjct: 288 DYAMNRAKEEAQKAVDAIEILPESEYKQAL 317
>ISPA_BACST (Q08291) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 297 Score = 37.0 bits (84), Expect = 0.046 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%) Frame = +2 Query: 23 IVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIG 202 I ++KT Y V L+ GA EL +G+ FQI+DD LD G + IG Sbjct: 179 IHRHKTGKMLQY-SVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIG 237 Query: 203 K-VGTDIEDYKCSWLIVQAMELANE 274 K VG+D + K ++ + ++ A E Sbjct: 238 KPVGSDQSNNKATYPALLSLAGAKE 262
>ISPA_BACSU (P54383) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 272 Score = 35.8 bits (81), Expect = 0.10 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = +2 Query: 35 KTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VG 211 KTS + +A A+L + + D L+ +G+ FQI+DD LD G + IGK VG Sbjct: 182 KTSKLLGFCVIAGAILADAPE-EDIETLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVG 240 Query: 212 TDIEDYKCSWLIVQAME 262 +D + K ++ + ++E Sbjct: 241 SDTTNDKSTYPSLLSLE 257
>CRTE_CYAPA (P48368) Geranylgeranyl pyrophosphate synthetase homolog (EC| 2.5.1.29) (GGPP synthetase) (Farnesyltranstransferase) Length = 300 Score = 35.8 bits (81), Expect = 0.10 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 9/86 (10%) Frame = +2 Query: 65 VACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSW 241 V LL GAK D +G+ FQI DD LD + +GK +G D++ K ++ Sbjct: 195 VLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATY 254 Query: 242 --------LIVQAMELANENEMKILY 295 I QA L E + +ILY Sbjct: 255 PSFWGVEESIKQAELLVEEAKEEILY 280
>RFL1_ARATH (Q8L3R3) Disease resistance protein RFL1 (RPS5-like protein 1)| (pNd13/pNd14) Length = 885 Score = 35.4 bits (80), Expect = 0.13 Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 6/106 (5%) Frame = +2 Query: 65 VACALLLNGAKLSDYVELKNVLIEMG--VYFQIQDDYLDCFGDPQVIGKVGTDIEDYKCS 238 V +LLL GAK D V + +++ EM ++ + C V +G D + Sbjct: 459 VRSSLLLEGAKDKDVVSMHDMVREMALWIFSDLGKHKERCI----VQAGIGLDELPEVEN 514 Query: 239 WLIVQAMELANENEMKILYENYGKSSPECVGAV----KNVYKELDL 364 W V+ M L N N KIL SPECV + +N YK +D+ Sbjct: 515 WRAVKRMSLMNNNFEKIL------GSPECVELITLFLQNNYKLVDI 554
>ISPB_SHIFL (P0AD58) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 323 Score = 35.4 bits (80), Expect = 0.13 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Frame = +2 Query: 8 QGYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGD 187 + Y R++ KT+ F C+ +L G + L++ +G FQ+ DD LD D Sbjct: 161 ENYMRVIYSKTARL-FEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 Query: 188 PQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKIL 292 + +GK VG D+ + K + ++ AM + +++ Sbjct: 220 GEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMI 255
>ISPB_ECOLI (P0AD57) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 323 Score = 35.4 bits (80), Expect = 0.13 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Frame = +2 Query: 8 QGYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGD 187 + Y R++ KT+ F C+ +L G + L++ +G FQ+ DD LD D Sbjct: 161 ENYMRVIYSKTARL-FEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNAD 219 Query: 188 PQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKIL 292 + +GK VG D+ + K + ++ AM + +++ Sbjct: 220 GEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMI 255
>MDH_RICPR (Q9ZDF3) Malate dehydrogenase (EC 1.1.1.37)| Length = 314 Score = 34.3 bits (77), Expect = 0.30 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Frame = +2 Query: 11 GYRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCF-GD 187 G IVK + ++Y P A A+ A L Y++ K ++ Y Q + D D + G Sbjct: 219 GGGEIVKLLKTGSAYYAPAASAI----AMLESYLKDKRQILTCAAYLQGEYDIHDLYIGV 274 Query: 188 PQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILY 295 P +IGK G +++ +EL E KIL+ Sbjct: 275 PIIIGKEG-----------VIKVIELQLTEEEKILF 299
>ISPA_MICLU (O66126) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 291 Score = 34.3 bits (77), Expect = 0.30 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = +2 Query: 137 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKILYENY 304 +G+ FQI+DD LD G + IGK VG+D+ + K +++ + +E + + L E Y Sbjct: 210 VGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKLTETY 266
>ISPA_HAEIN (P45204) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 295 Score = 32.7 bits (73), Expect = 0.87 Identities = 16/30 (53%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = +2 Query: 137 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIE 223 +G+ FQ+QDD LD GD IGK VG D++ Sbjct: 215 IGLAFQVQDDILDIEGDSAEIGKQVGADLD 244
>ISPA_ECOLI (P22939) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 299 Score = 31.6 bits (70), Expect = 1.9 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +2 Query: 137 MGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAMELANENEMKIL 292 +G+ FQ+QDD LD GD +GK G D + K ++ + +E A + ++ Sbjct: 215 IGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLI 267
>PREA_CYACA (Q9TLS1) Prenyl transferase (EC 2.5.1.-)| Length = 323 Score = 31.2 bits (69), Expect = 2.5 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 7/148 (4%) Frame = +2 Query: 14 YRRIVKYKTSYYSFYLPVACALLLNGAKLSDYVELKNVLI-----EMGVYFQIQDDYLDC 178 Y I+KY ++ + A + LSD+ + N +G+ FQI DD LD Sbjct: 161 YYSIIKYLEKSFNKTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDI 220 Query: 179 FGDPQVIGKVGTDIEDYKCSWLIVQAMELANENE--MKILYENYGKSSPECVGAVKNVYK 352 +GK+ T D K L + +N KI+ + + S + N+ K Sbjct: 221 TSSSTALGKMTT--SDLKLGNLTAPVLFALTKNSKLFKIIEREFCEKSD--ISEAINIIK 276 Query: 353 ELDLQDIFLEYESRVYKHLVSTIDAEPD 436 E + + E Y+H+ + I++ D Sbjct: 277 ETNAIE---ESFDLAYEHIEAAINSIKD 301
>GGPPS_BOVIN (P56966) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPPSase) (Geranylgeranyl diphosphate synthase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5 Length = 294 Score = 30.8 bits (68), Expect = 3.3 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Frame = +2 Query: 101 SDYVE-LKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSWLIVQAM----- 259 SDY E LK +L +G++FQI+DDY + K D+ + K S+ + A+ Sbjct: 165 SDYKEDLKPLLDTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPE 224 Query: 260 ELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHL 409 +N ++ EN CV ++NV ++ E ES+ YK + Sbjct: 225 STQVQNILRQRTENI-DIKKYCVHYLENVGSFEYTRNTLKELESKAYKQI 273
>Y732_FUSNN (Q8RFG6) UPF0348 protein FN0732| Length = 396 Score = 30.8 bits (68), Expect = 3.3 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 9/99 (9%) Frame = +2 Query: 161 DDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVG--- 331 DD D F I K+ D + K + L + L E KIL EN+G S C+ Sbjct: 186 DDEKDNFSSATYIRKILLDSNEKKENKLN-KIKNLVPEFSYKILEENFGVFS--CLSDFY 242 Query: 332 ------AVKNVYKELDLQDIFLEYESRVYKHLVSTIDAE 430 +KN + ++QD+ + E+R+YK+ + + E Sbjct: 243 DLIKYNIIKNCSELKNIQDLEIGLENRLYKYSLENLKFE 281
>GGPPS_HEVBR (Q94ID7) Geranylgeranyl pyrophosphate synthetase, chloroplast| precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 370 Score = 30.4 bits (67), Expect = 4.3 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Frame = +2 Query: 65 VACALLLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGK-VGTDIEDYKCSW 241 V +L G + +L+ ++G+ FQ+ DD LD Q +GK G D+ K ++ Sbjct: 264 VVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTY 323 Query: 242 LIVQAMELANENEMKI 289 + +E + E K+ Sbjct: 324 PKLLGIEKSREFAEKL 339
>CDC3_YEAST (P32457) Cell division control protein 3| Length = 520 Score = 30.4 bits (67), Expect = 4.3 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = +2 Query: 242 LIVQAMELANENEMKILYENYGKSSPECVGAVK--NVYKELD 361 LI Q ME E KILYENY S +G + +V+KE D Sbjct: 384 LIKQFMEELKERTSKILYENYRSSKLAKLGIKQDNSVFKEFD 425
>CBIO7_METAC (Q8TK65) Putative cobalt import ATP-binding protein cbiO 7| Length = 453 Score = 30.4 bits (67), Expect = 4.3 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%) Frame = +2 Query: 164 DYLDCFGDPQVIGKVGTDIEDYKCSWLIVQA-------MELANENEMKILYENYGKSSPE 322 DY+ + ++IG+ GT E +K L+ +A +E+ +E E + L YGK+SP+ Sbjct: 207 DYVYLMSNSKLIGQ-GTPAEVFKEQELLKKAGLRQPTTLEIYHEIERRGLA--YGKNSPK 263 Query: 323 CVGAVKNVYKELDL 364 + + N K LDL Sbjct: 264 TIPELVNTLKPLDL 277
>LOLD_LEPIN (Q8F6L8) Lipoprotein-releasing system ATP-binding protein lolD| Length = 241 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2 Query: 434 DRAIREILKIFLKKIYRRKK*TILSCFHNYDYYGETLNTVHSTDGDVM 577 D +++ L+K+ R K TIL H+ D+ +T +H DG V+ Sbjct: 178 DSTNTKVVMNILEKVNRETKTTILVVTHDPDFASKTKRQIHLVDGRVV 225
>LOLD_LEPIC (Q72PP0) Lipoprotein-releasing system ATP-binding protein lolD| Length = 241 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2 Query: 434 DRAIREILKIFLKKIYRRKK*TILSCFHNYDYYGETLNTVHSTDGDVM 577 D +++ L+K+ R K TIL H+ D+ +T +H DG V+ Sbjct: 178 DSTNTKVVMNILEKVNRETKTTILVVTHDPDFASKTKRQIHLVDGRVV 225
>YL140_MIMIV (Q5UR13) Hypothetical protein L140| Length = 304 Score = 30.0 bits (66), Expect = 5.7 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 9/102 (8%) Frame = +2 Query: 104 DYVELKNVLIEMGVYFQIQDDYLDCFGDPQVIGKVGT-DIEDYKCS------WLIVQAM- 259 +++E LI F+ DYLD F + + VG DI +Y ++ Q++ Sbjct: 12 EFIEPTYYLISQAWNFKYFRDYLDSFANKLKLVYVGLIDINEYDYIDDPTHVYIFCQSIT 71 Query: 260 -ELANENEMKILYENYGKSSPECVGAVKNVYKELDLQDIFLE 382 EL + KIL S P+ +KN K L + D +E Sbjct: 72 KELLEKKFNKILLNTEQLSIPKYFDIIKNYLKHLTIIDYSIE 113
>R1AB_CVPPU (Q9IW06) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; Unknown protein 1; 3C-like Length = 6684 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/48 (31%), Positives = 25/48 (52%) Frame = +2 Query: 155 IQDDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYE 298 I+ D+ D FGD +I G E+Y C+W V+ + N+ + + E Sbjct: 127 IEGDFKDYFGDEDIIEFEG---EEYHCAWTTVRDEKPLNQQTLFTIQE 171
>TRA1_DROME (Q8I8U7) Transcription-associated protein 1 (dTRA1)| Length = 3805 Score = 29.6 bits (65), Expect = 7.4 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +2 Query: 296 ENYGKSSPE-CVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILKIFLK 472 ++Y KS E C+ + YK +DL+D+ + V LV I P+ +RE + LK Sbjct: 1221 KSYMKSMLEICLTPINECYKNIDLKDLQAKATYEVIHELVRHI-TSPNTIVREESMVLLK 1279 Query: 473 KI 478 I Sbjct: 1280 HI 1281
>HEPS2_BACSU (P31114) Heptaprenyl diphosphate synthase component II (EC| 2.5.1.30) (HEPPP synthase subunit 2) (Spore germination protein C3) Length = 348 Score = 29.6 bits (65), Expect = 7.4 Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 4/166 (2%) Frame = +2 Query: 5 IQGYRRIVKYKTSYYSFYLPVACAL--LLNGAKLSDYVELKNVLIEMGVYFQIQDDYLDC 178 ++ Y R +K KT+ + V+C L + +GA + L +G+ +QI DD LD Sbjct: 188 LRTYLRRIKRKTA---LLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDF 244 Query: 179 FGDPQVIGK-VGTDIEDYKCSWLIVQAME-LANENEMKILYENYGKSSPECVGAVKNVYK 352 + +GK VG D+ + ++ A++ A +N++K++ +++ E + + K Sbjct: 245 TSTEEELGKPVGGDLLQGNVTLPVLYALKNPALKNQLKLI---NSETTQEQLEPIIEEIK 301 Query: 353 ELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILKIFLKKIYRRK 490 + D + + + ++ P R L K I +RK Sbjct: 302 KTDAIEASMAVSEMYLQKAFQKLNTLPRGRARSSLAAIAKYIGKRK 347
>Y1664_METJA (Q59058) Hypothetical protein MJ1664| Length = 226 Score = 29.3 bits (64), Expect = 9.7 Identities = 20/62 (32%), Positives = 30/62 (48%) Frame = +2 Query: 281 MKILYENYGKSSPECVGAVKNVYKELDLQDIFLEYESRVYKHLVSTIDAEPDRAIREILK 460 MKIL N+G + + K Y L +DIF EY + L I+ E ++ +E+ Sbjct: 171 MKILNINFG-----VLASTKGFYGNLKKEDIFKEYNIYILDKL---IEKEKNKIFKELKD 222 Query: 461 IF 466 IF Sbjct: 223 IF 224
>RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1053 Score = 29.3 bits (64), Expect = 9.7 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +2 Query: 248 VQAMELANENEMKILYENYGKSSPECVG--AVKNVYKELDLQDIFLEYESRVYKHLVSTI 421 ++ +L +E E ++ E YGK+ +G A+K + L DI LE E++ K + T Sbjct: 144 LEKKQLLSEKEYRVYREKYGKNFHAGMGAEAIKKI-----LSDIDLEKETQELKAELQT- 197 Query: 422 DAEPDRAIREILKIFLKKIYR 484 A+ R R I ++ + + +R Sbjct: 198 -AQGQRRTRAIRRLEVMEAFR 217
>YP01_MOUSE (Q8BQM4) Protein C030036P15Rik| Length = 679 Score = 29.3 bits (64), Expect = 9.7 Identities = 25/85 (29%), Positives = 34/85 (40%) Frame = +2 Query: 161 DDYLDCFGDPQVIGKVGTDIEDYKCSWLIVQAMELANENEMKILYENYGKSSPECVGAVK 340 D D F D + K I+ L+ E +MKI E GK SP+ + + Sbjct: 604 DALFDVFADGEAAEKASVQIK------LLAALKEFQPVFKMKIRKEGRGKYSPDQLCVLD 657 Query: 341 NVYKELDLQDIFLEYESRVYKHLVS 415 NV L F+ Y+ V K L S Sbjct: 658 NVKMNLRR---FIAYQETVEKRLTS 679 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,647,730 Number of Sequences: 219361 Number of extensions: 1375549 Number of successful extensions: 4403 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 4305 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4391 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
