ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal12f15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469697.1| Oryza sativa (japonica cultivar-group), mRNA 452 e-124
2dbj|AB110189.1| Oryza sativa (japonica cultivar-group) mRNA for ... 452 e-124
3dbj|AK065730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
4dbj|AK060366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
5gb|AY105257.1| Zea mays PCO119343 mRNA sequence 317 2e-83
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 280 4e-72
7gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genom... 280 4e-72
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 280 4e-72
9gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ... 44 0.38
10gb|AY104934.1| Zea mays PCO071754 mRNA sequence 44 0.38
11gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 42 1.5
12gb|AC159441.1| Trypanosoma brucei chromosome 5 clone RPCI93-30F7... 42 1.5
13gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8... 42 1.5
14ref|XM_819309.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 hy... 42 1.5
15ref|XM_860004.1| PREDICTED: Canis familiaris similar to chromoso... 42 1.5
16ref|XM_859988.1| PREDICTED: Canis familiaris similar to chromoso... 42 1.5
17ref|XM_859968.1| PREDICTED: Canis familiaris similar to chromoso... 42 1.5
18ref|XM_859951.1| PREDICTED: Canis familiaris similar to chromoso... 42 1.5
19ref|XM_531822.2| PREDICTED: Canis familiaris similar to chromoso... 42 1.5
20gb|AC005546.1|AC005546 Homo sapiens chromosome 19, cosmid R29425... 42 1.5
21dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
22gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
23emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
24emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
25ref|NM_113185.2| Arabidopsis thaliana unknown protein AT3G22850 ... 40 5.9
26ref|XM_362257.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.9
27gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, co... 40 5.9
28gb|AC134328.2| Mus musculus BAC clone RP24-299H18 from chromosom... 40 5.9
29gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.9
30gb|AY114623.1| Arabidopsis thaliana unknown protein (At3g22850) ... 40 5.9
31gb|AY072385.1| Arabidopsis thaliana unknown protein (At3g22850) ... 40 5.9
32gb|AC154395.4| Mus musculus chromosome 3, clone RP23-373G12, com... 40 5.9
33emb|BX824717.1|CNS0A5KO Arabidopsis thaliana Full-length cDNA Co... 40 5.9
34emb|BX825268.1|CNS0A58K Arabidopsis thaliana Full-length cDNA Co... 40 5.9
35dbj|AP001300.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 5.9
36gb|AF051092.1|AF051092 Xanthomonas campestris restriction endonu... 40 5.9
37gb|AC149219.4| Mus musculus BAC clone RP24-91L19 from 19, comple... 40 5.9
38gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosom... 40 5.9
39dbj|AB024973.1| Streptomyces tauricus gene for ketosynthase, par... 40 5.9
40dbj|AB024972.1| Streptomyces capoamus gene for ketosynthase, par... 40 5.9 
>ref|XM_469697.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1307

 Score =  452 bits (228), Expect = e-124
 Identities = 384/436 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaaccc 60
           ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| ||| |||
Sbjct: 384 ggtcaccgtcagcctgggccccgccggcgccctcgcctactcggcggccaaccagagccc 443

                                                                       
Query: 61  gctcgtccccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgt 120
            |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||  |
Sbjct: 444 cctcgtccccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacat 503

                                                                       
Query: 121 tgagaacattggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttac 180
           ||||||||||| ||  |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 504 tgagaacattgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttac 563

                                                                       
Query: 181 catcctgattgaggcctacagaaccctccgggacaggggccctctcccagccagccaggt 240
           ||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||
Sbjct: 564 catcctgattgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggt 623

                                                                       
Query: 241 cgtgagagatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccac 300
           ||||||||||||||| ||   |||  | ||||||||||| |||||  |||| ||||||||
Sbjct: 624 cgtgagagatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccac 683

                                                                       
Query: 301 cttcgtcgctgctgatgctgatggcagtatccccttcttctggggcgtcgactccgaaga 360
           |||||| ||||| ||||||||||| || || || |||||||||||||| ||||||||  |
Sbjct: 684 cttcgttgctgcagatgctgatggtagcattcctttcttctggggcgttgactccgagaa 743

                                                                       
Query: 361 ccaccttgtgttctctgacgacaatgagcttctcaaggcagggtgcggaaactcattcgc 420
           ||||||||||||||||||| |   ||| ||||||||||||   ||||| ||||| || ||
Sbjct: 744 ccaccttgtgttctctgacaatgttgaccttctcaaggcatcctgcgggaactcgtttgc 803

                           
Query: 421 gccattccccaaaggc 436
           ||||||||||||||||
Sbjct: 804 gccattccccaaaggc 819
to top
>dbj|AB110189.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, clone: 17FPG011
          Length = 1129

 Score =  452 bits (228), Expect = e-124
 Identities = 384/436 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaaccc 60
           ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| ||| |||
Sbjct: 203 ggtcaccgtcagcctgggccccgccggcgccctcgcctactcggcggccaaccagagccc 262

                                                                       
Query: 61  gctcgtccccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgt 120
            |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||  |
Sbjct: 263 cctcgtccccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacat 322

                                                                       
Query: 121 tgagaacattggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttac 180
           ||||||||||| ||  |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 323 tgagaacattgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttac 382

                                                                       
Query: 181 catcctgattgaggcctacagaaccctccgggacaggggccctctcccagccagccaggt 240
           ||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||
Sbjct: 383 catcctgattgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggt 442

                                                                       
Query: 241 cgtgagagatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccac 300
           ||||||||||||||| ||   |||  | ||||||||||| |||||  |||| ||||||||
Sbjct: 443 cgtgagagatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccac 502

                                                                       
Query: 301 cttcgtcgctgctgatgctgatggcagtatccccttcttctggggcgtcgactccgaaga 360
           |||||| ||||| ||||||||||| || || || |||||||||||||| ||||||||  |
Sbjct: 503 cttcgttgctgcagatgctgatggtagcattcctttcttctggggcgttgactccgagaa 562

                                                                       
Query: 361 ccaccttgtgttctctgacgacaatgagcttctcaaggcagggtgcggaaactcattcgc 420
           ||||||||||||||||||| |   ||| ||||||||||||   ||||| ||||| || ||
Sbjct: 563 ccaccttgtgttctctgacaatgttgaccttctcaaggcatcctgcgggaactcgtttgc 622

                           
Query: 421 gccattccccaaaggc 436
           ||||||||||||||||
Sbjct: 623 gccattccccaaaggc 638
to top
>dbj|AK065730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037C05, full
           insert sequence
          Length = 1111

 Score =  452 bits (228), Expect = e-124
 Identities = 384/436 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaaccc 60
           ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| ||| |||
Sbjct: 206 ggtcaccgtcagcctgggccccgccggcgccctcgcctactcggcggccaaccagagccc 265

                                                                       
Query: 61  gctcgtccccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgt 120
            |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||  |
Sbjct: 266 cctcgtccccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacat 325

                                                                       
Query: 121 tgagaacattggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttac 180
           ||||||||||| ||  |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 326 tgagaacattgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttac 385

                                                                       
Query: 181 catcctgattgaggcctacagaaccctccgggacaggggccctctcccagccagccaggt 240
           ||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||
Sbjct: 386 catcctgattgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggt 445

                                                                       
Query: 241 cgtgagagatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccac 300
           ||||||||||||||| ||   |||  | ||||||||||| |||||  |||| ||||||||
Sbjct: 446 cgtgagagatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccac 505

                                                                       
Query: 301 cttcgtcgctgctgatgctgatggcagtatccccttcttctggggcgtcgactccgaaga 360
           |||||| ||||| ||||||||||| || || || |||||||||||||| ||||||||  |
Sbjct: 506 cttcgttgctgcagatgctgatggtagcattcctttcttctggggcgttgactccgagaa 565

                                                                       
Query: 361 ccaccttgtgttctctgacgacaatgagcttctcaaggcagggtgcggaaactcattcgc 420
           ||||||||||||||||||| |   ||| ||||||||||||   ||||| ||||| || ||
Sbjct: 566 ccaccttgtgttctctgacaatgttgaccttctcaaggcatcctgcgggaactcgtttgc 625

                           
Query: 421 gccattccccaaaggc 436
           ||||||||||||||||
Sbjct: 626 gccattccccaaaggc 641
to top
>dbj|AK060366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A05, full
           insert sequence
          Length = 1394

 Score =  452 bits (228), Expect = e-124
 Identities = 384/436 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaaccc 60
           ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| ||| |||
Sbjct: 487 ggtcaccgtcagcctgggccccgccggcgccctcgcctactcggcggccaaccagagccc 546

                                                                       
Query: 61  gctcgtccccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgt 120
            |||||||||||| |||||||| |||||||||||||||| |||||||||||||||||  |
Sbjct: 547 cctcgtccccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacat 606

                                                                       
Query: 121 tgagaacattggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttac 180
           ||||||||||| ||  |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 607 tgagaacattgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttac 666

                                                                       
Query: 181 catcctgattgaggcctacagaaccctccgggacaggggccctctcccagccagccaggt 240
           ||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||
Sbjct: 667 catcctgattgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggt 726

                                                                       
Query: 241 cgtgagagatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccac 300
           ||||||||||||||| ||   |||  | ||||||||||| |||||  |||| ||||||||
Sbjct: 727 cgtgagagatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccac 786

                                                                       
Query: 301 cttcgtcgctgctgatgctgatggcagtatccccttcttctggggcgtcgactccgaaga 360
           |||||| ||||| ||||||||||| || || || |||||||||||||| ||||||||  |
Sbjct: 787 cttcgttgctgcagatgctgatggtagcattcctttcttctggggcgttgactccgagaa 846

                                                                       
Query: 361 ccaccttgtgttctctgacgacaatgagcttctcaaggcagggtgcggaaactcattcgc 420
           ||||||||||||||||||| |   ||| ||||||||||||   ||||| ||||| || ||
Sbjct: 847 ccaccttgtgttctctgacaatgttgaccttctcaaggcatcctgcgggaactcgtttgc 906

                           
Query: 421 gccattccccaaaggc 436
           ||||||||||||||||
Sbjct: 907 gccattccccaaaggc 922
to top
>gb|AY105257.1| Zea mays PCO119343 mRNA sequence
          Length = 1188

 Score =  317 bits (160), Expect = 2e-83
 Identities = 325/380 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaacccg 61
           |||||||||||||| ||| || ||||||| || ||||||||  |||||||| ||| ||| 
Sbjct: 263 gtcaccgtcagcctgggcccctccggcgcgctggcctactcggcggccaaccagagcccc 322

                                                                       
Query: 62  ctcgtccccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgtt 121
           ||||| || ||| |||||||| ||||||||||||| || ||| |||||||||| ||| ||
Sbjct: 323 ctcgtgccaaggttgtttggtgctgtgaatgacatcttctgcttgttccaagggcatatt 382

                                                                       
Query: 122 gagaacattggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttacc 181
           |||||||||| |||||||||||| || || || ||||||||||| ||||||||||| || 
Sbjct: 383 gagaacattgccaacctgaagcagcattatggcctgagcaagactgcaaatgaggtgact 442

                                                                       
Query: 182 atcctgattgaggcctacagaaccctccgggacaggggccctctcccagccagccaggtc 241
           ||||| || ||||||||||| |||||  |||||||||||||| |||||||||||||||| 
Sbjct: 443 atcctcatagaggcctacaggaccctgagggacaggggccctgtcccagccagccaggtt 502

                                                                       
Query: 242 gtgagagatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccacc 301
           |||||||| || |||||   ||| || ||||||||||| |||||  ||||||| || |||
Sbjct: 503 gtgagagaccttagtgggaagttcgcgttcatcctgtatgacaccctgtcgaagtctacc 562

                                                                       
Query: 302 ttcgtcgctgctgatgctgatggcagtatccccttcttctggggcgtcgactccgaagac 361
           || || |||||||| |||||||| || ||||| |||||||||||||| |||| |||| ||
Sbjct: 563 tttgttgctgctgacgctgatggtagcatccctttcttctggggcgttgactacgaaaac 622

                               
Query: 362 caccttgtgttctctgacga 381
           ||||||||||||||||||||
Sbjct: 623 caccttgtgttctctgacga 642
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  280 bits (141), Expect = 4e-72
 Identities = 219/245 (89%)
 Strand = Plus / Minus

                                                                            
Query: 68       cccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgttgagaac 127
                |||||| |||||||| |||||||||||||||| |||||||||||||||||  ||||||||
Sbjct: 30269387 cccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacattgagaac 30269328

                                                                            
Query: 128      attggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttaccatcctg 187
                |||| ||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 30269327 attgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttaccatcctg 30269268

                                                                            
Query: 188      attgaggcctacagaaccctccgggacaggggccctctcccagccagccaggtcgtgaga 247
                |||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 30269267 attgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggtcgtgaga 30269208

                                                                            
Query: 248      gatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccaccttcgtc 307
                |||||||| ||   |||  | ||||||||||| |||||  |||| |||||||||||||| 
Sbjct: 30269207 gatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccaccttcgtt 30269148

                     
Query: 308      gctgc 312
                |||||
Sbjct: 30269147 gctgc 30269143



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                            
Query: 314      gatgctgatggcagtatccccttcttctggggcgtcgactccgaagaccaccttgtgttc 373
                ||||||||||| || || || |||||||||||||| ||||||||  ||||||||||||||
Sbjct: 30269062 gatgctgatggtagcattcctttcttctggggcgttgactccgagaaccaccttgtgttc 30269003

                                                                            
Query: 374      tctgacgacaatgagcttctcaaggcagggtgcggaaactcattcgcgccattccccaaa 433
                |||||| |   ||| ||||||||||||   ||||| ||||| || |||||||||||||||
Sbjct: 30269002 tctgacaatgttgaccttctcaaggcatcctgcgggaactcgtttgcgccattccccaaa 30268943

                  
Query: 434      gg 435
                ||
Sbjct: 30268942 gg 30268941



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1        ggtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaaccc 60
                ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| ||| |||
Sbjct: 30271010 ggtcaccgtcagcctgggccccgccggcgccctcgcctactcggcggccaaccagagccc 30270951

                             
Query: 61       gctcgtccccagg 73
                 ||||||||||||
Sbjct: 30270950 cctcgtccccagg 30270938
to top
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
             sequence
          Length = 130359

 Score =  280 bits (141), Expect = 4e-72
 Identities = 219/245 (89%)
 Strand = Plus / Minus

                                                                         
Query: 68    cccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgttgagaac 127
             |||||| |||||||| |||||||||||||||| |||||||||||||||||  ||||||||
Sbjct: 61067 cccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacattgagaac 61008

                                                                         
Query: 128   attggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttaccatcctg 187
             |||| ||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 61007 attgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttaccatcctg 60948

                                                                         
Query: 188   attgaggcctacagaaccctccgggacaggggccctctcccagccagccaggtcgtgaga 247
             |||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 60947 attgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggtcgtgaga 60888

                                                                         
Query: 248   gatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccaccttcgtc 307
             |||||||| ||   |||  | ||||||||||| |||||  |||| |||||||||||||| 
Sbjct: 60887 gatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccaccttcgtt 60828

                  
Query: 308   gctgc 312
             |||||
Sbjct: 60827 gctgc 60823



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                         
Query: 314   gatgctgatggcagtatccccttcttctggggcgtcgactccgaagaccaccttgtgttc 373
             ||||||||||| || || || |||||||||||||| ||||||||  ||||||||||||||
Sbjct: 60742 gatgctgatggtagcattcctttcttctggggcgttgactccgagaaccaccttgtgttc 60683

                                                                         
Query: 374   tctgacgacaatgagcttctcaaggcagggtgcggaaactcattcgcgccattccccaaa 433
             |||||| |   ||| ||||||||||||   ||||| ||||| || |||||||||||||||
Sbjct: 60682 tctgacaatgttgaccttctcaaggcatcctgcgggaactcgtttgcgccattccccaaa 60623

               
Query: 434   gg 435
             ||
Sbjct: 60622 gg 60621



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1     ggtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaaccc 60
             ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| ||| |||
Sbjct: 62690 ggtcaccgtcagcctgggccccgccggcgccctcgcctactcggcggccaaccagagccc 62631

                          
Query: 61    gctcgtccccagg 73
              ||||||||||||
Sbjct: 62630 cctcgtccccagg 62618
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  280 bits (141), Expect = 4e-72
 Identities = 219/245 (89%)
 Strand = Plus / Minus

                                                                            
Query: 68       cccaggatgtttggttctgtgaatgacatattttgcctgttccaaggacatgttgagaac 127
                |||||| |||||||| |||||||||||||||| |||||||||||||||||  ||||||||
Sbjct: 30360809 cccaggttgtttggtgctgtgaatgacatattctgcctgttccaaggacacattgagaac 30360750

                                                                            
Query: 128      attggcaacctgaagcaacactacggtctgagcaagacagcaaatgaggttaccatcctg 187
                |||| ||  |||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 30360749 attgccagtctgaagcaacactatggtctgagcaagacagcaactgaggttaccatcctg 30360690

                                                                            
Query: 188      attgaggcctacagaaccctccgggacaggggccctctcccagccagccaggtcgtgaga 247
                |||||||||||||| |||||| |||||||||||||||||||||| || ||||||||||||
Sbjct: 30360689 attgaggcctacaggaccctcagggacaggggccctctcccagctagtcaggtcgtgaga 30360630

                                                                            
Query: 248      gatctcagtggacggtttgctttcatcctgtacgacacggtgtcgaaatccaccttcgtc 307
                |||||||| ||   |||  | ||||||||||| |||||  |||| |||||||||||||| 
Sbjct: 30360629 gatctcagcgggaagttcacgttcatcctgtatgacactctgtcaaaatccaccttcgtt 30360570

                     
Query: 308      gctgc 312
                |||||
Sbjct: 30360569 gctgc 30360565



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                            
Query: 314      gatgctgatggcagtatccccttcttctggggcgtcgactccgaagaccaccttgtgttc 373
                ||||||||||| || || || |||||||||||||| ||||||||  ||||||||||||||
Sbjct: 30360484 gatgctgatggtagcattcctttcttctggggcgttgactccgagaaccaccttgtgttc 30360425

                                                                            
Query: 374      tctgacgacaatgagcttctcaaggcagggtgcggaaactcattcgcgccattccccaaa 433
                |||||| |   ||| ||||||||||||   ||||| ||||| || |||||||||||||||
Sbjct: 30360424 tctgacaatgttgaccttctcaaggcatcctgcgggaactcgtttgcgccattccccaaa 30360365

                  
Query: 434      gg 435
                ||
Sbjct: 30360364 gg 30360363



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                            
Query: 1        ggtcaccgtcagcctcggctccgccggcgccctcgcctactcctcggccaacaagaaccc 60
                ||||||||||||||| ||| ||||||||||||||||||||||  |||||||| ||| |||
Sbjct: 30362432 ggtcaccgtcagcctgggccccgccggcgccctcgcctactcggcggccaaccagagccc 30362373

                             
Query: 61       gctcgtccccagg 73
                 ||||||||||||
Sbjct: 30362372 cctcgtccccagg 30362360
to top
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 279   acgacacggtgtcgaaatccaccttc 304
             ||||||||||||||| ||||||||||
Sbjct: 38451 acgacacggtgtcgagatccaccttc 38426
to top
>gb|AY104934.1| Zea mays PCO071754 mRNA sequence
          Length = 1058

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 335 ttcttctggggcgtcgactccgaagaccaccttg 368
           |||||||||||||| |||| |||| |||||||||
Sbjct: 72  ttcttctggggcgttgactacgaaaaccaccttg 39
to top
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 252    tcagtggacggtttgctttca 272
              |||||||||||||||||||||
Sbjct: 264105 tcagtggacggtttgctttca 264125
to top
>gb|AC159441.1| Trypanosoma brucei chromosome 5 clone RPCI93-30F7, complete sequence
          Length = 101712

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 252   tcagtggacggtttgctttca 272
             |||||||||||||||||||||
Sbjct: 26061 tcagtggacggtttgctttca 26041
to top
>gb|AC159432.1| Trypanosoma brucei chromosome 5 clone RPCI93-28F8, complete sequence
          Length = 140539

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 252    tcagtggacggtttgctttca 272
              |||||||||||||||||||||
Sbjct: 129421 tcagtggacggtttgctttca 129401
to top
>ref|XM_819309.1| Trypanosoma brucei TREU927 clone RPCI93-28F8 hypothetical protein
           (Tb927.5.770) partial mRNA
          Length = 2181

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 252 tcagtggacggtttgctttca 272
           |||||||||||||||||||||
Sbjct: 490 tcagtggacggtttgctttca 510
to top
>ref|XM_860004.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 5 (LOC474593), mRNA
          Length = 2450

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  ctgtgaatgacatattttgcc 104
           |||||||||||||||||||||
Sbjct: 926 ctgtgaatgacatattttgcc 946
to top
>ref|XM_859988.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 4 (LOC474593), mRNA
          Length = 2438

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  ctgtgaatgacatattttgcc 104
           |||||||||||||||||||||
Sbjct: 932 ctgtgaatgacatattttgcc 952
to top
>ref|XM_859968.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 3 (LOC474593), mRNA
          Length = 2271

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  ctgtgaatgacatattttgcc 104
           |||||||||||||||||||||
Sbjct: 920 ctgtgaatgacatattttgcc 940
to top
>ref|XM_859951.1| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 2 (LOC474593), mRNA
          Length = 2354

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  ctgtgaatgacatattttgcc 104
           |||||||||||||||||||||
Sbjct: 920 ctgtgaatgacatattttgcc 940
to top
>ref|XM_531822.2| PREDICTED: Canis familiaris similar to chromosome 2 open reading
           frame 30, transcript variant 1 (LOC474593), mRNA
          Length = 2446

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  ctgtgaatgacatattttgcc 104
           |||||||||||||||||||||
Sbjct: 920 ctgtgaatgacatattttgcc 940
to top
>gb|AC005546.1|AC005546 Homo sapiens chromosome 19, cosmid R29425, complete sequence
          Length = 41172

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   aggggccctctcccagccagccagg 239
             ||||||||||| |||||||||||||
Sbjct: 20356 aggggccctctgccagccagccagg 20332
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 303      tcgtcgctgctgatgctgatg 323
                |||||||||||||||||||||
Sbjct: 18944503 tcgtcgctgctgatgctgatg 18944483
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 303      tcgtcgctgctgatgctgatg 323
                |||||||||||||||||||||
Sbjct: 18870730 tcgtcgctgctgatgctgatg 18870710
to top
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 303   tcgtcgctgctgatgctgatg 323
             |||||||||||||||||||||
Sbjct: 25876 tcgtcgctgctgatgctgatg 25896
to top
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151203

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 303   tcgtcgctgctgatgctgatg 323
             |||||||||||||||||||||
Sbjct: 40620 tcgtcgctgctgatgctgatg 40600
to top
>ref|NM_113185.2| Arabidopsis thaliana unknown protein AT3G22850 mRNA, complete cds
          Length = 991

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 gaggttaccatcctgattgaggcctacagaac 204
           |||||||||||  ||||||| |||||||||||
Sbjct: 365 gaggttaccattgtgattgaagcctacagaac 396
to top
>ref|XM_362257.1| Magnaporthe grisea 70-15 hypothetical protein (MG04702.4) partial
           cds
          Length = 771

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 cttctggggcgtcgactccg 356
           ||||||||||||||||||||
Sbjct: 397 cttctggggcgtcgactccg 378
to top
>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence
          Length = 153520

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   acatgttgagaacattggca 134
             ||||||||||||||||||||
Sbjct: 47326 acatgttgagaacattggca 47345
to top
>gb|AC134328.2| Mus musculus BAC clone RP24-299H18 from chromosome 12, complete
             sequence
          Length = 189420

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   agcaagacagcaaatgaggt 177
             ||||||||||||||||||||
Sbjct: 75335 agcaagacagcaaatgaggt 75354
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      cgccggcgccctcgcctact 41
               ||||||||||||||||||||
Sbjct: 6279549 cgccggcgccctcgcctact 6279568
to top
>gb|AY114623.1| Arabidopsis thaliana unknown protein (At3g22850) mRNA, complete cds
          Length = 813

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 gaggttaccatcctgattgaggcctacagaac 204
           |||||||||||  ||||||| |||||||||||
Sbjct: 301 gaggttaccattgtgattgaagcctacagaac 332
to top
>gb|AY072385.1| Arabidopsis thaliana unknown protein (At3g22850) mRNA, complete cds
          Length = 991

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 gaggttaccatcctgattgaggcctacagaac 204
           |||||||||||  ||||||| |||||||||||
Sbjct: 365 gaggttaccattgtgattgaagcctacagaac 396
to top
>gb|AC154395.4| Mus musculus chromosome 3, clone RP23-373G12, complete sequence
          Length = 255105

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ttctgtgaatgacatatttt 101
             ||||||||||||||||||||
Sbjct: 72677 ttctgtgaatgacatatttt 72658
to top
>emb|BX824717.1|CNS0A5KO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH67ZD07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 973

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 gaggttaccatcctgattgaggcctacagaac 204
           |||||||||||  ||||||| |||||||||||
Sbjct: 351 gaggttaccattgtgattgaagcctacagaac 382
to top
>emb|BX825268.1|CNS0A58K Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL24ZC08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 931

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 173 gaggttaccatcctgattgaggcctacagaac 204
           |||||||||||  ||||||| |||||||||||
Sbjct: 344 gaggttaccattgtgattgaagcctacagaac 375
to top
>dbj|AP001300.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F5N5
          Length = 71327

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 173  gaggttaccatcctgattgaggcctacagaac 204
            |||||||||||  ||||||| |||||||||||
Sbjct: 1584 gaggttaccattgtgattgaagcctacagaac 1615
to top
>gb|AF051092.1|AF051092 Xanthomonas campestris restriction endonuclease R.XbaI (xbaIR) and
            DNA modification methyltransferase M.XbaI (xbaIM) genes,
            complete cds; and transposase gene, partial cds
          Length = 3141

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  cctgtacgacacggtgtcga 293
            ||||||||||||||||||||
Sbjct: 2974 cctgtacgacacggtgtcga 2993
to top
>gb|AC149219.4| Mus musculus BAC clone RP24-91L19 from 19, complete sequence
          Length = 205546

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    atgttgagaacattggcaac 136
              ||||||||||||||||||||
Sbjct: 118407 atgttgagaacattggcaac 118426
to top
>gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosome 16, complete sequence
          Length = 187085

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 90     atgacatattttgcctgttccaaggaca 117
              |||||| || ||||||||||||||||||
Sbjct: 109127 atgacacatgttgcctgttccaaggaca 109100
to top
>dbj|AB024973.1| Streptomyces tauricus gene for ketosynthase, partial cds
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   cgtcagcctcggctccgccg 26
           ||||||||||||||||||||
Sbjct: 276 cgtcagcctcggctccgccg 295
to top
>dbj|AB024972.1| Streptomyces capoamus gene for ketosynthase, partial cds
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   cgtcagcctcggctccgccg 26
           ||||||||||||||||||||
Sbjct: 276 cgtcagcctcggctccgccg 295


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,299,437
Number of Sequences: 3902068
Number of extensions: 3299437
Number of successful extensions: 64015
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63856
Number of HSP's gapped (non-prelim): 152
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top