| Clone Name | baal12f07 |
|---|---|
| Clone Library Name | barley_pub |
>PAAD_THEAC (Q9HJ72) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 180 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%) Frame = +3 Query: 183 FLKICLIISPCNMGTCSRIAAGCAD-LLFQAASRSL 287 FL ++I PC++ T S+IAAG +D L+ +AA+ SL Sbjct: 73 FLFDSMVIVPCSITTISKIAAGISDTLITRAAAVSL 108
>NR6A1_HUMAN (Q15406) Orphan nuclear receptor NR6A1 (Germ cell nuclear factor)| (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR) Length = 480 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Frame = -1 Query: 335 LPEAPANGL------HVDPGSAERATGCLEQQICATCGDS*TSTH 219 LP P NG +DPG+ + EQ+ C CGD T H Sbjct: 27 LPPPPRNGFCQDELAELDPGTISVSDDRAEQRTCLICGDRATGLH 71
>HBB_MERMR (O13078) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 353 STYAHHLPEAPANGLHVDPGSAERATGCLEQQICATCGDS*T-STHVAW 210 +TYA L + ++ LHVDP + CL I A G + T T VAW Sbjct: 83 NTYAE-LSQLHSDKLHVDPDNFRLLADCLTVVIAAKMGTAFTVETQVAW 130
>COBD_SALTY (P97084) Threonine-phosphate decarboxylase (EC 4.1.1.81)| (L-threonine-O-3-phosphate decarboxylase) Length = 364 Score = 28.5 bits (62), Expect = 4.0 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = -3 Query: 159 GAAWGSKGCSSSRWAIREATSW 94 G A GC RW++REA W Sbjct: 112 GRALAQSGCEIRRWSLREADGW 133
>P2RX7_MOUSE (Q9Z1M0) P2X purinoceptor 7 (ATP receptor) (P2X7) (Purinergic| receptor) (P2Z receptor) Length = 595 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 237 IAAGCADLLFQAASRSLC*AGIYVKPICRC 326 +A C DLL S + C +G+Y P C+C Sbjct: 346 LATVCIDLLINTYSSAFCRSGVY--PYCKC 373
>MAON_MOUSE (Q8BMF3) NADP-dependent malic enzyme, mitochondrial precursor (EC| 1.1.1.40) (NADP-ME) (Malic enzyme 3) Length = 604 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = -1 Query: 389 GDQLKYLPHYCCSTYAHHLPEAPANGLHVDPG 294 G +L +P CS+ P APA G H G Sbjct: 8 GARLTSVPRIACSSLRRQAPSAPAQGCHSKSG 39
>ZPR1_CAEEL (O16999) Zinc-finger protein ZPR1 homolog| Length = 455 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/55 (23%), Positives = 18/55 (32%) Frame = +2 Query: 65 DLACPYCYEDHDVASLIXXXXXXXXXXXXXXXCPICSEKVSKDMLNHITMQHGYL 229 D CP C ED + + CP C K ++ +HG L Sbjct: 25 DSVCPVCEEDGETRIMCTSIPYYRAVILMSFECPHCGHKNNEIQSGEAVQEHGTL 79
>UREE_EDWIC (Q6J171) Urease accessory protein ureE| Length = 225 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/28 (35%), Positives = 20/28 (71%) Frame = +2 Query: 164 PICSEKVSKDMLNHITMQHGYLFKNRRR 247 P+ +EK+ L+++T++HG ++KN R Sbjct: 15 PVWAEKLKAYELDYLTLEHGDMYKNSCR 42
>PHK_STRAW (Q82NM9) Probable phosphoketolase (EC 4.1.2.-)| Length = 793 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Frame = +2 Query: 5 ARGRGWTSWTWXGDENAGRPD--LAC 76 ARG G W W G +N G PD LAC Sbjct: 607 ARGAG--IWEWAGTQNDGEPDVVLAC 630
>HR38_DROME (P49869) Probable nuclear hormone receptor HR38 (dHR38)| Length = 1073 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Frame = -1 Query: 365 HYCCSTYAHHLPEAPANGLHVDPGSAERATGCLEQ---QICATCGDS*TSTH 219 H +A L AP N P SA+ G L Q Q+CA CGD+ H Sbjct: 705 HSHAHAHALQLNSAP-NSAASSPASADLQAGRLLQAPSQLCAVCGDTAACQH 755
>VA2_SOLIN (P35775) Venom allergen 2 precursor (Venom allergen II) (Allergen| Sol i 2) (Sol i II) Length = 138 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = +3 Query: 171 VPKRFLKIC--LIISPCNMGTCSRIAAGCAD 257 + +R +K+C +I P N+ C ++A+ C D Sbjct: 73 IKERSMKMCTKIITDPANVENCKKVASRCVD 103
>COBD_SALTI (Q8Z8H8) Threonine-phosphate decarboxylase (EC 4.1.1.81)| (L-threonine-O-3-phosphate decarboxylase) Length = 364 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = -3 Query: 159 GAAWGSKGCSSSRWAIREATSW 94 G A GC RW++REA W Sbjct: 112 GRALAQIGCEIRRWSLREADGW 133
>ERCC4_HUMAN (Q92889) DNA repair endonuclease XPF (EC 3.1.-.-) (DNA excision| repair protein ERCC-4) (DNA-repair protein complementing XP-F cell) (Xeroderma pigmentosum group F complementing protein) Length = 905 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -3 Query: 255 LRNLRRFLNKYPCCMVI*LSISLETFSEQIGQGAAW 148 LR L ++L++Y C + L SL + GQ + W Sbjct: 280 LRTLLQYLSQYDCVTFLNLLESLRATEKAFGQNSGW 315 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,963,245 Number of Sequences: 219361 Number of extensions: 769700 Number of successful extensions: 2607 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2570 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2607 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)