ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal11p01 |
|---|---|
| Clone Library Name | barley_pub |
>MIAA_SHIFL (P59197) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 316 Score = 33.9 bits (76), Expect = 0.46 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Frame = +3 Query: 330 GFEGQINACWTHKVTTKELDTIRAAGF--LVSVIHGRHD----IIAQVCHARRLAQRLLP 491 GFE ++ A + +L +IR G+ + S + G + VC R+LA+R + Sbjct: 225 GFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQIT 284 Query: 492 VARMVDLHGAHLVSHERPEEVNNALMDLIKA 584 R G H + E+PE+ + ++ ++ A Sbjct: 285 WLR--GWEGVHWLDSEKPEQARDEVLQVVGA 313
>MIAA_ECOLI (P16384) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 316 Score = 33.9 bits (76), Expect = 0.46 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Frame = +3 Query: 330 GFEGQINACWTHKVTTKELDTIRAAGF--LVSVIHGRHD----IIAQVCHARRLAQRLLP 491 GFE ++ A + +L +IR G+ + S + G + VC R+LA+R + Sbjct: 225 GFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQIT 284 Query: 492 VARMVDLHGAHLVSHERPEEVNNALMDLIKA 584 R G H + E+PE+ + ++ ++ A Sbjct: 285 WLR--GWEGVHWLDSEKPEQARDEVLQVVGA 313
>MIAA_ECOL6 (Q8CXV3) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 316 Score = 33.9 bits (76), Expect = 0.46 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%) Frame = +3 Query: 330 GFEGQINACWTHKVTTKELDTIRAAGF--LVSVIHGRHD----IIAQVCHARRLAQRLLP 491 GFE ++ A + +L +IR G+ + S + G + VC R+LA+R + Sbjct: 225 GFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQIT 284 Query: 492 VARMVDLHGAHLVSHERPEEVNNALMDLIKA 584 R G H + E+PE+ + ++ ++ A Sbjct: 285 WLR--GWEGVHWLDSEKPEQARDEVLQVVGA 313
>MIAA_ECO57 (Q8XDN3) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 316 Score = 33.1 bits (74), Expect = 0.79 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Frame = +3 Query: 330 GFEGQINACWTHKVTTKELDTIRAAGF------LVSVIHGRHDIIAQVCHARRLAQRLLP 491 GFE ++ A + +L +IR G+ L I + VC R+LA+R + Sbjct: 225 GFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLGGEISYDEMVYRGVCATRQLAKRQIT 284 Query: 492 VARMVDLHGAHLVSHERPEEVNNALMDLIKA 584 R G H + E+PE+ + ++ ++ A Sbjct: 285 WLR--GWEGVHWLDSEKPEQARDEVLQVVGA 313
>M3KSL_DROME (Q95UN8) Mitogen-activated protein kinase kinase kinase (EC| 2.7.11.25) (Mixed lineage kinase) (dMLK) (Protein slipper) Length = 1161 Score = 31.2 bits (69), Expect = 3.0 Identities = 20/73 (27%), Positives = 34/73 (46%) Frame = -2 Query: 273 SLSLCRIQLPHQGTPSYSGFPNRLELFALEFWPLRTGTRGRASVHLPWGNTPSHRR*RSA 94 +++ R + G+PS+SG L L G +G+ WG + H+R RS Sbjct: 512 TITAVRDKAEQPGSPSFSG---------LRIVALTDGHKGKT-----WGPSTMHQRERSL 557 Query: 93 MPARTAGEAPSPP 55 +P++ +G P P Sbjct: 558 LPSQLSGGQPEWP 570
>TKT1_YEAST (P23254) Transketolase 1 (EC 2.2.1.1) (TK 1)| Length = 679 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = +3 Query: 186 PEQRALVDLET--HYTKEYLDEEVESCTRRAILYKEYVKGISSTGMQCNCGFEGQINACW 359 P++ +V E HY K L VE+ + L+ EY K G + GQ+ A W Sbjct: 282 PDKSFVVPQEVYDHYQKTILKPGVEANNKWNKLFSEYQKKFPELGAELARRLSGQLPANW 341 Query: 360 THKVTT 377 K+ T Sbjct: 342 ESKLPT 347
>EZY3_CHLRE (Q08356) Ezy-1 protein (Fragment)| Length = 297 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Frame = +3 Query: 24 PSMGAMISCKLAAMAPHRLSSLALLNV-----TGGGMECFPKVDGQMLSLAFRFLRARTP 188 P++ +++C AMAP + +LAL+ + TGGG VDG + L+ P Sbjct: 175 PTLALVLACGYLAMAPRQYRALALVPMILPGKTGGG------VDGALTREGLSLLKKLRP 228 Query: 189 EQRALVDLETHY 224 L D + + Sbjct: 229 GISGLADKDKQW 240
>ACOC_PSEPU (Q59695) Dihydrolipoyllysine-residue acetyltransferase component of| acetoin cleaving system (EC 2.3.1.12) (Acetoin dehydrogenase E2 component) (Dihydrolipoamide acetyltransferase component of acetoin cleaving system) Length = 370 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = +3 Query: 27 SMGAMISCKLAAMAPHRLSSLALLNVTGGGMECFPKVDGQML 152 SMG +S +A +AP R++SL+L+ G G ++GQ L Sbjct: 207 SMGGAVSLNVAGLAPQRVASLSLIASAGLG----EAINGQYL 244
>IF2_PROMA (Q7VA20) Translation initiation factor IF-2| Length = 1134 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 524 SSQP*KTRRGQQRTNGSYKGHQVCGDASRVVFPARKHIRPDSDG 655 S QP T+ + GSYKG++V V P R++ +PD+ G Sbjct: 280 SGQPGSTKHPRNLPTGSYKGNRV----ELVGAPIRRNTKPDNGG 319 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,811,807 Number of Sequences: 219361 Number of extensions: 2127368 Number of successful extensions: 5653 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5480 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5653 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
