>gb|AY596553.1| Saccharum officinarum clone SCUTLR1058C02, complete sequence
          Length = 1732

 Score =  125 bits (63), Expect = 8e-26
 Identities = 134/158 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 agtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacca 178
           |||||||||||||| | ||||||||| ||||| | || || || || ||||| |||||||
Sbjct: 374 agtgggaggacaggatggcccgaggcttattccgctacgatgtcactgcctgtgagacca 433

                                                                       
Query: 179 aggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaaga 238
           |||| || |||||| | ||||||||||||||||| || || ||||| |||||||| ||||
Sbjct: 434 aggtcatccctggcaaccttgggtttgttgcacaactcaatgaagggcgccaccttaaga 493

                                                 
Query: 239 agcgcccaaccgagttccgngttgaccgtgtgctccag 276
           ||||||| || ||||| || || |||||||||||||||
Sbjct: 494 agcgccctactgagtttcgtgtggaccgtgtgctccag 531



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                      
Query: 3   tgctgcttgcctgcttccaagncttcccctctatgctttcaag 45
           |||||| |||||||||||||| ||||||||||| || ||||||
Sbjct: 262 tgctgcctgcctgcttccaag-cttcccctctacgcgttcaag 303

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  111 bits (56), Expect = 1e-21
 Identities = 130/155 (83%)
 Strand = Plus / Minus

                                                                           
Query: 118     cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 177
               |||||||| |||||| | ||||||||  | ||| ||||||| || || ||||| ||||||
Sbjct: 4534249 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 4534190

                                                                           
Query: 178     aaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaag 237
               ||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 4534189 aaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctcaag 4534130

                                                  
Query: 238     aagcgcccaaccgagttccgngttgaccgtgtgct 272
               |||||||| || || ||||| || |||||||||||
Sbjct: 4534129 aagcgccctactgaattccgcgtggaccgtgtgct 4534095

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  111 bits (56), Expect = 1e-21
 Identities = 130/155 (83%)
 Strand = Plus / Minus

                                                                           
Query: 118     cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 177
               |||||||| |||||| | ||||||||  | ||| ||||||| || || ||||| ||||||
Sbjct: 4534230 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 4534171

                                                                           
Query: 178     aaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaag 237
               ||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 4534170 aaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctcaag 4534111

                                                  
Query: 238     aagcgcccaaccgagttccgngttgaccgtgtgct 272
               |||||||| || || ||||| || |||||||||||
Sbjct: 4534110 aagcgccctactgaattccgcgtggaccgtgtgct 4534076

>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129155

 Score =  111 bits (56), Expect = 1e-21
 Identities = 130/155 (83%)
 Strand = Plus / Plus

                                                                         
Query: 118   cagtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacc 177
             |||||||| |||||| | ||||||||  | ||| ||||||| || || ||||| ||||||
Sbjct: 70529 cagtgggaagacaggatggcccgaggtttgttccgatatgatgtcactgcctgtgagacc 70588

                                                                         
Query: 178   aaggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaag 237
             ||||| || || ||| | ||||||||||||||||| || || ||||| ||||||||||||
Sbjct: 70589 aaggttatcccaggcaaccttgggtttgttgcacaactgaatgaaggacgccacctcaag 70648

                                                
Query: 238   aagcgcccaaccgagttccgngttgaccgtgtgct 272
             |||||||| || || ||||| || |||||||||||
Sbjct: 70649 aagcgccctactgaattccgcgtggaccgtgtgct 70683

>gb|AY105327.1| Zea mays PCO147247 mRNA sequence
          Length = 1954

 Score =  109 bits (55), Expect = 5e-21
 Identities = 132/158 (83%)
 Strand = Plus / Plus

                                                                       
Query: 119 agtgggaggacagggtagcccgaggcctattcagatatgacgtaacagcctgcgagacca 178
           |||||||||||||| |  | |||||| ||||| | || || || || ||||| |||||||
Sbjct: 632 agtgggaggacaggatgactcgaggcttattccgctacgatgtcactgcctgtgagacca 691

                                                                       
Query: 179 aggtgattcctggcgagcttgggtttgttgcacagcttaacgaaggccgccacctcaaga 238
           |||| ||||||||| | ||||||||||||||||| || || ||||| ||||| || ||||
Sbjct: 692 aggtcattcctggcaaccttgggtttgttgcacaactcaatgaagggcgccatcttaaga 751

                                                 
Query: 239 agcgcccaaccgagttccgngttgaccgtgtgctccag 276
           ||||||| || ||||| || || |||||||||||||||
Sbjct: 752 agcgccctactgagtttcgtgtggaccgtgtgctccag 789



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                      
Query: 3   tgctgcttgcctgcttccaagncttcccctctatgctttcaag 45
           |||||| |||||||||||||| ||||||||||| || ||||||
Sbjct: 520 tgctgcctgcctgcttccaag-cttcccctctacgcgttcaag 561

>dbj|AK071188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M14, full
           insert sequence
          Length = 2088

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 103/121 (85%)
 Strand = Plus / Plus

                                                                       
Query: 152 gatatgacgtaacagcctgcgagaccaaggtgattcctggcgagcttgggtttgttgcac 211
           ||||||| || || ||||| ||||||||||| || || ||| | ||||||||||||||||
Sbjct: 704 gatatgatgtcactgcctgtgagaccaaggttatcccaggcaaccttgggtttgttgcac 763

                                                                       
Query: 212 agcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgngttgaccgtgtgc 271
           | || || ||||| |||||||||||||||||||| || || ||||| || ||||||||||
Sbjct: 764 aactgaatgaaggacgccacctcaagaagcgccctactgaattccgcgtggaccgtgtgc 823

            
Query: 272 t 272
           |
Sbjct: 824 t 824



 Score = 46.1 bits (23), Expect = 0.058
 Identities = 42/47 (89%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                          
Query: 1   attgctgcttgcctgcttccaagncttcccctctatgctttcaaggc 47
           ||||||||||||| | ||||||| ||||| || ||||||||||||||
Sbjct: 553 attgctgcttgcccgattccaag-cttccgctgtatgctttcaaggc 598

>dbj|AK059556.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G08, full
           insert sequence
          Length = 1295

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 220 gaaggccgccacctcaagaagcgcccaaccgagttccgngttgaccgtgtgct 272
           ||||| |||||||||||||||||||| || || ||||| || |||||||||||
Sbjct: 14  gaaggacgccacctcaagaagcgccctactgaattccgcgtggaccgtgtgct 66

>emb|CT573504.2| Medicago truncatula chromosome 5 clone mth2-178o19, COMPLETE SEQUENCE
          Length = 132030

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                        
Query: 206    ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgngttga 263
              |||| ||||||||||| ||||| |||||||||||| | ||||| |||||| | |||||
Sbjct: 101810 ttgctcagcttaacgagggccgacacctcaagaagagaccaactgagttcagagttga 101867

>dbj|AK111215.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B04, full
           insert sequence
          Length = 2890

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 202 tttgttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgngtt 261
           ||||| |||||||| ||||| |||||| ||  |||||||||||| || |||||||| || 
Sbjct: 180 tttgtggcacagctgaacgagggccgctacagcaagaagcgccccacagagttccgtgtg 239

               
Query: 262 gacc 265
           ||||
Sbjct: 240 gacc 243

>ref|NM_124894.4| Arabidopsis thaliana unknown protein AT5G55120 mRNA, complete cds
          Length = 1874

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 206 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgngttgac 264
           |||| ||||| || ||||| || || ||||||||| | |||||||||||||| ||||||
Sbjct: 719 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 777

>gb|AY091285.1| Arabidopsis thaliana unknown protein (At5g55120) mRNA, complete cds
          Length = 1327

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 206 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgngttgac 264
           |||| ||||| || ||||| || || ||||||||| | |||||||||||||| ||||||
Sbjct: 299 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 357

>gb|AY063788.1| Arabidopsis thaliana unknown protein (At5g55120) mRNA, complete cds
          Length = 1788

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 206 ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgngttgac 264
           |||| ||||| || ||||| || || ||||||||| | |||||||||||||| ||||||
Sbjct: 615 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 673

>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15
          Length = 82918

 Score = 48.1 bits (24), Expect = 0.015
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 206   ttgcacagcttaacgaaggccgccacctcaagaagcgcccaaccgagttccgngttgac 264
             |||| ||||| || ||||| || || ||||||||| | |||||||||||||| ||||||
Sbjct: 29107 ttgcgcagctgaatgaaggtcggcatctcaagaagagaccaaccgagttccgtgttgac 29165

>gb|AY489190.1| Capsicum annuum putative At4g26850-like protein  mRNA, complete
           sequence
          Length = 589

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 166 gcctgcgagaccaaggtgattcctgg 191
           |||||||| |||||||||||||||||
Sbjct: 399 gcctgcgaaaccaaggtgattcctgg 424

>emb|BX831350.1|CNS0A1O4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS80ZC01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1806

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 232 ctcaagaagcgcccaaccgagttccgngttgac 264
           ||||||||| | |||||||||||||| ||||||
Sbjct: 680 ctcaagaagagaccaaccgagttccgtgttgac 712

>emb|BX829969.1|CNS0A043 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB4ZG03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1694

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 232 ctcaagaagcgcccaaccgagttccgngttgac 264
           ||||||||| | |||||||||||||| ||||||
Sbjct: 630 ctcaagaagagaccaaccgagttccgtgttgac 662

>emb|BX831865.1|CNS09ZT1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH35ZF07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1838

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 232 ctcaagaagcgcccaaccgagttccgngttgac 264
           ||||||||| | |||||||||||||| ||||||
Sbjct: 745 ctcaagaagagaccaaccgagttccgtgttgac 777

>emb|BX831807.1|CNS09ZUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH30ZF08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1692

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 232 ctcaagaagcgcccaaccgagttccgngttgac 264
           ||||||||| | |||||||||||||| ||||||
Sbjct: 605 ctcaagaagagaccaaccgagttccgtgttgac 637

>gb|BT013858.1| Lycopersicon esculentum clone 132824R, mRNA sequence
          Length = 2013

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 226 cgccacctcaagaagcgcccaaccgagtt 254
           |||||||| |||||||||||||| |||||
Sbjct: 763 cgccacctaaagaagcgcccaacagagtt 791

>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence
          Length = 123565

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 85    actgagttcttcctcaattctctc 108
             |||||||| |||||||||||||||
Sbjct: 79670 actgagtttttcctcaattctctc 79693

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 2       ttgctgcttgcctgcttcca 21
               ||||||||||||||||||||
Sbjct: 2050505 ttgctgcttgcctgcttcca 2050486

>emb|BX830641.1|CNS09ZZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB9ZD04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1684

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 234 caagaagcgcccaaccgagttccgngttgac 264
           ||||||| | |||||||||||||| ||||||
Sbjct: 595 caagaagagaccaaccgagttccgtgttgac 625

>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete
              sequence
          Length = 195733

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     tcccctctatgctttcaagg 46
              ||||||||||||||||||||
Sbjct: 114212 tcccctctatgctttcaagg 114193

>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0026E05
          Length = 159860

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      ttgctgcttgcctgcttcca 21
              ||||||||||||||||||||
Sbjct: 100713 ttgctgcttgcctgcttcca 100694

>emb|CR354563.13| Zebrafish DNA sequence from clone DKEY-210I1 in linkage group 7,
             complete sequence
          Length = 147943

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    gagctccctactgagttctt 95
             ||||||||||||||||||||
Sbjct: 60496 gagctccctactgagttctt 60515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,768,088
Number of Sequences: 3902068
Number of extensions: 1768088
Number of successful extensions: 29468
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29407
Number of HSP's gapped (non-prelim): 60
length of query: 276
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 254
effective length of database: 17,147,199,772
effective search space: 4355388742088
effective search space used: 4355388742088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)