| Clone Name | baal11o04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43142 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 43201 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 43202 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 43261 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 43262 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 43321 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 43322 ttggtactcggacctcgg 43339 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21975 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 21916 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 21915 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 21856 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 21855 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 21796 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 21795 ttggtactcggacctcgg 21778
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121982 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 122041 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122042 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 122101 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122102 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 122161 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 122162 ttggtactcggacctcgg 122179 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100855 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 100796 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 100795 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 100736 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 100735 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 100676 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 100675 ttggtactcggacctcgg 100658
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122699 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 122758 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122759 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 122818 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122819 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 122878 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 122879 ttggtactcggacctcgg 122896 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101532 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 101473 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 101472 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 101413 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 101412 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 101353 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 101352 ttggtactcggacctcgg 101335
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118318 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 118377 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118378 gttcgagcttttcctgggagtatggcatcagttacatacttcagcgccgtagcgcctggt 118437 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 118438 atgagcctcgtggagaagcaatcgctagtccacggggctcatacttcagcgctgcagcgc 118497 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 118498 ttggtactcggacctcgg 118515 Score = 377 bits (190), Expect = e-101 Identities = 196/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96576 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 96517 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 96516 gttcgagcttttcctgggagtatggcatcagttacatacttcagcgccgtagcgcctggt 96457 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 96456 atgagcctcgtggagaagcaatcgctagtccacggggctcatacttcagcgctgcagcgc 96397 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 96396 ttggtactcggacctcgg 96379
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117099 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 117158 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117159 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 117218 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 117219 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 117278 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 117279 ttggtactcggacctcgg 117296
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 118183 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 118242 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118243 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 118302 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 118303 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 118362 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 118363 ttggtactcggacctcgg 118380 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 96973 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 96914 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 96913 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 96854 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 96853 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 96794 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 96793 ttggtactcggacctcgg 96776
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 118183 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 118242 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118243 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 118302 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 118303 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 118362 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 118363 ttggtactcggacctcgg 118380 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 96973 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 96914 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 96913 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 96854 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 96853 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 96794 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 96793 ttggtactcggacctcgg 96776
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 118132 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 118191 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118192 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 118251 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 118252 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 118311 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 118312 ttggtactcggacctcgg 118329 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 96918 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 96859 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 96858 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 96799 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 96798 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 96739 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 96738 ttggtactcggacctcgg 96721
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 31509551 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 31509492 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31509491 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 31509432 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 31509431 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 31509372 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 31509371 ttggtactcggacctcgg 31509354 Score = 361 bits (182), Expect = 6e-97 Identities = 194/198 (97%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 27319999 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 27320058 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27320059 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 27320118 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 27320119 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgc 27320178 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 27320179 ttggtactcggacctcgg 27320196
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 83045 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 83104 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 83105 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 83164 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 83165 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 83224 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 83225 ttggtactcggacctcgg 83242
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 124014 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 123955 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 123954 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 123895 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 123894 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 123835 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 123834 ttggtactcggacctcgg 123817 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 15740 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 15681 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 15680 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 15621 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 15620 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 15561 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 15560 ttggtactcggacctcgg 15543
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 142548 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 142489 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 142488 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 142429 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 142428 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 142369 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 142368 ttggtactcggacctcgg 142351
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95144 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 95085 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95084 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 95025 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95024 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 94965 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 94964 ttggtactcggacctcgg 94947
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 56871 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 56930 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 56931 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 56990 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 56991 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 57050 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 57051 ttggtactcggacctcgg 57068
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 29208 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 29149 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 29148 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 29089 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 29088 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 29029 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 29028 ttggtactcggacctcgg 29011
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9269900 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 9269841 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9269840 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 9269781 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9269780 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 9269721 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 9269720 ttggtactcggacctcgg 9269703 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9229400 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 9229341 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9229340 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 9229281 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9229280 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 9229221 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 9229220 ttggtactcggacctcgg 9229203 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9165988 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 9165929 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9165928 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 9165869 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9165868 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 9165809 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 9165808 ttggtactcggacctcgg 9165791 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9057814 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 9057755 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9057754 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 9057695 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9057694 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 9057635 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 9057634 ttggtactcggacctcgg 9057617 Score = 149 bits (75), Expect = 4e-33 Identities = 93/99 (93%) Strand = Plus / Minus Query: 114 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 173 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811 Query: 174 catacttcagcgctgcagcgcttggtactcggacctcgg 212 ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 25661810 catacttcagcgccgcagcgcttggtactcgaacctcgg 25661772
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 19939885 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 19939826 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19939825 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 19939766 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 19939765 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 19939706 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 19939705 ttggtactcggacctcgg 19939688 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10388752 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 10388693 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10388692 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 10388633 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10388632 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 10388573 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 10388572 ttggtactcggacctcgg 10388555 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10275546 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 10275605 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10275606 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 10275665 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10275666 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 10275725 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 10275726 ttggtactcggacctcgg 10275743
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9240381 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 9240440 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9240441 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 9240500 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9240501 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 9240560 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 9240561 ttggtactcggacctcgg 9240578 Score = 155 bits (78), Expect = 7e-35 Identities = 156/182 (85%), Gaps = 5/182 (2%) Strand = Plus / Plus Query: 28 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 87 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 3579634 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 3579693 Query: 88 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 147 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 3579694 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 3579748 Query: 148 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 207 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3579749 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 3579808 Query: 208 ct 209 || Sbjct: 3579809 ct 3579810
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 31600067 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 31600008 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 31600007 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 31599948 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 31599947 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 31599888 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 31599887 ttggtactcggacctcgg 31599870 Score = 361 bits (182), Expect = 6e-97 Identities = 194/198 (97%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 27411322 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 27411381 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27411382 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 27411441 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 27411442 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgc 27411501 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 27411502 ttggtactcggacctcgg 27411519
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 46158 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 46217 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 46218 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 46277 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 46278 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 46337 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 46338 ttggtactcggacctcgg 46355
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 51594 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 51653 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 51654 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 51713 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 51714 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 51773 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 51774 ttggtactcggacctcgg 51791
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 406 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 347 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 346 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 287 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 286 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 227 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 226 ttggtactcggacctcgg 209
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 626 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 567 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 566 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 507 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 506 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 447 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 446 ttggtactcggacctcgg 429
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 822 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 763 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 762 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 703 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 702 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 643 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 642 ttggtactcggacctcgg 625
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1547 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 1488 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1487 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 1428 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1427 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 1368 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 1367 ttggtactcggacctcgg 1350
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 691 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 632 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 631 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 572 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 571 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 512 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 511 ttggtactcggacctcgg 494
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1418 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 1359 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1358 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 1299 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1298 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 1239 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 1238 ttggtactcggacctcgg 1221
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1547 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 1488 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1487 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 1428 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1427 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 1368 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 1367 ttggtactcggacctcgg 1350
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 635 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 576 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 575 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 516 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 515 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 456 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 455 ttggtactcggacctcgg 438
>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full insert sequence Length = 425 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 212 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 153 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 152 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 93 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 92 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 33 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 32 ttggtactcggacctcgg 15
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1170 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 1111 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1110 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 1051 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1050 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 991 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 990 ttggtactcggacctcgg 973
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 19951161 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 19951102 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19951101 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 19951042 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 19951041 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 19950982 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 19950981 ttggtactcggacctcgg 19950964 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10394791 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 10394732 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10394731 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 10394672 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10394671 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 10394612 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 10394611 ttggtactcggacctcgg 10394594 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10281585 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 10281644 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10281645 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 10281704 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10281705 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 10281764 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 10281765 ttggtactcggacctcgg 10281782
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 118126 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 118185 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118186 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 118245 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 118246 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 118305 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 118306 ttggtactcggacctcgg 118323 Score = 369 bits (186), Expect = 2e-99 Identities = 195/198 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 96913 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 96854 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 96853 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 96794 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 96793 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 96734 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 96733 ttggtactcggacctcgg 96716
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 361 bits (182), Expect = 6e-97 Identities = 194/198 (97%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 20206 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 20265 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 20266 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggt 20325 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 20326 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgc 20385 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 20386 ttggtactcggacctcgg 20403
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 353 bits (178), Expect = 1e-94 Identities = 194/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 118153 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 118212 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 118213 gttcgagcttttcctgggagtatggcatgggttacatacttca-cgccgtagcgcctggt 118271 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 118272 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 118331 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 118332 ttggtactcggacctcgg 118349 Score = 353 bits (178), Expect = 1e-94 Identities = 194/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 96965 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 96906 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 96905 gttcgagcttttcctgggagtatggcatgggttacatacttca-cgccgtagcgcctggt 96847 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 96846 atgagcctcgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 96787 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 96786 ttggtactcggacctcgg 96769
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 353 bits (178), Expect = 1e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5634065 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 5634124 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 5634125 gttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggt 5634184 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5634185 atgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 5634244 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 5634245 ttggtactcggacctcgg 5634262 Score = 85.7 bits (43), Expect = 5e-14 Identities = 46/47 (97%) Strand = Plus / Plus Query: 166 acggggctcatacttcagcgctgcagcgcttggtactcggacctcgg 212 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcgg 13417133
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 353 bits (178), Expect = 1e-94 Identities = 193/198 (97%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5634054 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 5634113 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 5634114 gttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggt 5634173 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5634174 atgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 5634233 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 5634234 ttggtactcggacctcgg 5634251 Score = 85.7 bits (43), Expect = 5e-14 Identities = 46/47 (97%) Strand = Plus / Plus Query: 166 acggggctcatacttcagcgctgcagcgcttggtactcggacctcgg 212 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcgg 13371407
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 353 bits (178), Expect = 1e-94 Identities = 193/198 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 18820 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 18761 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 18760 gttcgagcttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggt 18701 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 18700 atgagcctcgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgc 18641 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 18640 ttggtactcggacctcgg 18623
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 345 bits (174), Expect = 3e-92 Identities = 193/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121925 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 121984 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 121985 gttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggt 122043 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 122044 atgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgc 122103 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 122104 ttggtactcggacctcgg 122121 Score = 345 bits (174), Expect = 3e-92 Identities = 193/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100812 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 100753 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 100752 gttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggt 100694 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 100693 atgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgc 100634 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 100633 ttggtactcggacctcgg 100616
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 345 bits (174), Expect = 3e-92 Identities = 193/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7165 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 7106 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 7105 gttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggt 7047 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 7046 atgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgc 6987 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 6986 ttggtactcggacctcgg 6969
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 345 bits (174), Expect = 3e-92 Identities = 193/198 (97%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1753 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 1694 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 1693 gttcgagcttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggt 1635 Query: 135 atgagcctcgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgc 194 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 1634 atgagcctcgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgc 1575 Query: 195 ttggtactcggacctcgg 212 |||||||||||||||||| Sbjct: 1574 ttggtactcggacctcgg 1557
>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.8), mRNA Length = 858 Score = 293 bits (148), Expect = 1e-76 Identities = 157/160 (98%) Strand = Plus / Plus Query: 53 aggtacccttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacata 112 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 630 aggtacccctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacata 689 Query: 113 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggc 172 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 690 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggc 749 Query: 173 tcatacttcagcgctgcagcgcttggtactcggacctcgg 212 |||||||||||||||||||||||||||||||||||||||| Sbjct: 750 tcatacttcagcgctgcagcgcttggtactcggacctcgg 789
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 250 bits (126), Expect = 1e-63 Identities = 135/138 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 814535 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 814476 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 814475 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggt 814416 Query: 135 atgagcctcgtggagaag 152 |||||||||||||||||| Sbjct: 814415 atgagcctcgtggagaag 814398 Score = 42.1 bits (21), Expect = 0.68 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 141 ctcgtggagaagcaattgctagt----ccacggggctcatacttca 182 |||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 250 bits (126), Expect = 1e-63 Identities = 135/138 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23743 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 23684 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 23683 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggt 23624 Query: 135 atgagcctcgtggagaag 152 |||||||||||||||||| Sbjct: 23623 atgagcctcgtggagaag 23606
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 250 bits (126), Expect = 1e-63 Identities = 135/138 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 92666 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtc 92607 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 92606 gttcgagcttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggt 92547 Query: 135 atgagcctcgtggagaag 152 |||||||||||||||||| Sbjct: 92546 atgagcctcgtggagaag 92529
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 206 bits (104), Expect = 2e-50 Identities = 117/121 (96%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131100 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 131159 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 131160 gttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggt 131215 Query: 135 a 135 | Sbjct: 131216 a 131216 Score = 206 bits (104), Expect = 2e-50 Identities = 117/121 (96%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105778 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 105719 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 105718 gttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggt 105663 Query: 135 a 135 | Sbjct: 105662 a 105662
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 206 bits (104), Expect = 2e-50 Identities = 117/121 (96%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131093 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 131152 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 131153 gttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggt 131208 Query: 135 a 135 | Sbjct: 131209 a 131209 Score = 206 bits (104), Expect = 2e-50 Identities = 117/121 (96%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105776 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 105717 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 105716 gttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggt 105661 Query: 135 a 135 | Sbjct: 105660 a 105660
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 567 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 566 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 511 Query: 135 a 135 | Sbjct: 510 a 510
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134226 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 134285 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 134286 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 134341 Query: 135 a 135 | Sbjct: 134342 a 134342 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107680 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 107621 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107620 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107565 Query: 135 a 135 | Sbjct: 107564 a 107564
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138683 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 138742 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 138743 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 138798 Query: 135 a 135 | Sbjct: 138799 a 138799 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111377 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 111318 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 111317 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 111262 Query: 135 a 135 | Sbjct: 111261 a 111261
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137904 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 137963 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 137964 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 138019 Query: 135 a 135 | Sbjct: 138020 a 138020 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112041 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 111982 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 111981 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 111926 Query: 135 a 135 | Sbjct: 111925 a 111925 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 137996 tacttcagcgccgtagcgcctggtactcggac 138027 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 111949 tacttcagcgccgtagcgcctggtactcggac 111918
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133312 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 133371 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 133372 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 133427 Query: 135 a 135 | Sbjct: 133428 a 133428 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106970 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 106911 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 106910 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 106855 Query: 135 a 135 | Sbjct: 106854 a 106854 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 133404 tacttcagcgccgtagcgcctggtactcggac 133435 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 106878 tacttcagcgccgtagcgcctggtactcggac 106847
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130117 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 130176 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 130177 gttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggt 130232 Query: 135 a 135 | Sbjct: 130233 a 130233 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103328 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 103269 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103268 gttcgagcttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggt 103213 Query: 135 a 135 | Sbjct: 103212 a 103212
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134505 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 134564 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 134565 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 134620 Query: 135 a 135 | Sbjct: 134621 a 134621 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107902 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 107843 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107842 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107787 Query: 135 a 135 | Sbjct: 107786 a 107786
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138034 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 138093 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 138094 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 138149 Query: 135 a 135 | Sbjct: 138150 a 138150 Score = 198 bits (100), Expect = 5e-48 Identities = 116/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111265 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 111206 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 111205 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 111150 Query: 135 a 135 | Sbjct: 111149 a 111149
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 194 bits (98), Expect = 8e-47 Identities = 104/106 (98%) Strand = Plus / Minus Query: 62 tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 121 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 24880 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 24821 Query: 122 cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccac 167 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24820 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccac 24775
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137829 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 137888 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 137889 gttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggt 137944 Query: 135 a 135 | Sbjct: 137945 a 137945 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111268 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 111209 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 111208 gttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggt 111153 Query: 135 a 135 | Sbjct: 111152 a 111152
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 129992 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggcc 130051 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 130052 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 130107 Query: 135 a 135 | Sbjct: 130108 a 130108 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104643 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggcc 104584 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 104583 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 104528 Query: 135 a 135 | Sbjct: 104527 a 104527
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 140427 gtattctctacctacccacctgtgttggtttcgggtacaggtacccttttgttgaaggtc 140486 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 140487 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 140542 Query: 135 a 135 | Sbjct: 140543 a 140543 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 113230 gtattctctacctacccacctgtgttggtttcgggtacaggtacccttttgttgaaggtc 113171 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 113170 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 113115 Query: 135 a 135 | Sbjct: 113114 a 113114 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 140519 tacttcagcgccgtagcgcctggtactcggac 140550 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 113138 tacttcagcgccgtagcgcctggtactcggac 113107
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1674 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 1615 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 1614 gttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggt 1559 Query: 135 a 135 | Sbjct: 1558 a 1558
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131323 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 131382 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 131383 gttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggt 131438 Query: 135 a 135 | Sbjct: 131439 a 131439 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105441 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 105382 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 105381 gttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggt 105326 Query: 135 a 135 | Sbjct: 105325 a 105325
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1693 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 1634 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 1633 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtatcgcctggt 1578 Query: 135 a 135 | Sbjct: 1577 a 1577
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2170 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 2111 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 2110 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 2055 Query: 135 a 135 | Sbjct: 2054 a 2054
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 132548 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttaaaggtc 132607 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 132608 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 132663 Query: 135 a 135 | Sbjct: 132664 a 132664 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105423 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttaaaggtc 105364 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 105363 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 105308 Query: 135 a 135 | Sbjct: 105307 a 105307 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 132640 tacttcagcgccgtagcgcctggtactcggac 132671 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 105331 tacttcagcgccgtagcgcctggtactcggac 105300
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132284 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 132343 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 132344 gttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggt 132399 Query: 135 a 135 | Sbjct: 132400 a 132400 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106365 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 106306 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| Sbjct: 106305 gttcgagcttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggt 106250 Query: 135 a 135 | Sbjct: 106249 a 106249
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 190 bits (96), Expect = 1e-45 Identities = 115/121 (95%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1676 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 1617 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 1616 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 1561 Query: 135 a 135 | Sbjct: 1560 a 1560
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 184 bits (93), Expect = 7e-44 Identities = 116/122 (95%), Gaps = 5/122 (4%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccc-ttttgttgaaggt 73 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 128854 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggt 128913 Query: 74 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 133 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 128914 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 128969 Query: 134 ta 135 || Sbjct: 128970 ta 128971 Score = 184 bits (93), Expect = 7e-44 Identities = 116/122 (95%), Gaps = 5/122 (4%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccc-ttttgttgaaggt 73 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 103602 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggt 103543 Query: 74 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 133 ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 103542 cgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctgg 103487 Query: 134 ta 135 || Sbjct: 103486 ta 103485
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 182 bits (92), Expect = 3e-43 Identities = 114/121 (94%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141204 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtc 141263 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 141264 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcttggt 141319 Query: 135 a 135 | Sbjct: 141320 a 141320 Score = 182 bits (92), Expect = 3e-43 Identities = 114/121 (94%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112124 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtc 112065 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 112064 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcttggt 112009 Query: 135 a 135 | Sbjct: 112008 a 112008 Score = 58.0 bits (29), Expect = 1e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 176 tacttcagcgctgcagcgcttggtactcggacctcgg 212 ||||||||||| | ||||||||||||||||||||||| Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcgg 141332 Score = 58.0 bits (29), Expect = 1e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggacctcgg 212 ||||||||||| | ||||||||||||||||||||||| Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcgg 111996
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 182 bits (92), Expect = 3e-43 Identities = 114/121 (94%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134917 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 134976 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 134977 gttcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagcgcctggt 135032 Query: 135 a 135 | Sbjct: 135033 a 135033 Score = 182 bits (92), Expect = 3e-43 Identities = 114/121 (94%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107508 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 107449 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 107448 gttcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagcgcctggt 107393 Query: 135 a 135 | Sbjct: 107392 a 107392
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 174 bits (88), Expect = 7e-41 Identities = 113/121 (93%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 126192 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtc 126251 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||||| Sbjct: 126252 gttcgagcttttcctgagagtatgacatgggt----tacttcagcgccgtagcgcctggt 126307 Query: 135 a 135 | Sbjct: 126308 a 126308 Score = 174 bits (88), Expect = 7e-41 Identities = 113/121 (93%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 108730 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtc 108671 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||||| Sbjct: 108670 gttcgagcttttcctgagagtatgacatgggt----tacttcagcgccgtagcgcctggt 108615 Query: 135 a 135 | Sbjct: 108614 a 108614 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 126284 tacttcagcgccgtagcgcctggtactcggac 126315 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||| | ||||| |||||||||||| Sbjct: 108638 tacttcagcgccgtagcgcctggtactcggac 108607
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 174 bits (88), Expect = 7e-41 Identities = 113/121 (93%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 130192 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtc 130251 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| | | ||||||||||| |||||||||||| Sbjct: 130252 gttcgagcttttcctgggagtatggcatggat----tacttcagcgctgtagcgcctggt 130307 Query: 135 a 135 | Sbjct: 130308 a 130308 Score = 174 bits (88), Expect = 7e-41 Identities = 113/121 (93%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105202 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtc 105143 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| | | ||||||||||| |||||||||||| Sbjct: 105142 gttcgagcttttcctgggagtatggcatggat----tacttcagcgctgtagcgcctggt 105087 Query: 135 a 135 | Sbjct: 105086 a 105086 Score = 42.1 bits (21), Expect = 0.68 Identities = 27/29 (93%) Strand = Plus / Plus Query: 176 tacttcagcgctgcagcgcttggtactcg 204 ||||||||||||| ||||| ||||||||| Sbjct: 130284 tacttcagcgctgtagcgcctggtactcg 130312 Score = 42.1 bits (21), Expect = 0.68 Identities = 27/29 (93%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcg 204 ||||||||||||| ||||| ||||||||| Sbjct: 105110 tacttcagcgctgtagcgcctggtactcg 105082
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 172 bits (87), Expect = 3e-40 Identities = 112/120 (93%), Gaps = 4/120 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1690 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 1631 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 1630 gttcgagcttttcctgggagtatggctagggt----tacttcagcgccgtagcgcctggt 1575
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 172 bits (87), Expect = 3e-40 Identities = 93/95 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90020 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 89961 Query: 75 gttcgagcttttcctgggagtatggcatcggttac 109 |||||||||||||||||||||||||||| |||||| Sbjct: 89960 gttcgagcttttcctgggagtatggcatgggttac 89926 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||||| ||||||| |||||||||| Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggac 89897
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 134625 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 134684 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 134685 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 134740 Query: 135 at 136 || Sbjct: 134741 at 134742 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 108005 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 107946 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107945 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107890 Query: 135 at 136 || Sbjct: 107889 at 107888
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 135263 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 135322 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 135323 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 135378 Query: 135 at 136 || Sbjct: 135379 at 135380 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 108294 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 108235 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 108234 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 108179 Query: 135 at 136 || Sbjct: 108178 at 108177
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 3199 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 3140 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 3139 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 3084 Query: 135 at 136 || Sbjct: 3083 at 3082
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 133871 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 133930 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 133931 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 133986 Query: 135 at 136 || Sbjct: 133987 at 133988 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 107165 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 107106 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107105 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107050 Query: 135 at 136 || Sbjct: 107049 at 107048
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 3444 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 3385 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 3384 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 3329 Query: 135 at 136 || Sbjct: 3328 at 3327
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 134006 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 134065 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 134066 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 134121 Query: 135 at 136 || Sbjct: 134122 at 134123 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 107337 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 107278 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107277 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107222 Query: 135 at 136 || Sbjct: 107221 at 107220
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 134004 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 134063 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 134064 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 134119 Query: 135 at 136 || Sbjct: 134120 at 134121 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 107334 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 107275 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107274 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107219 Query: 135 at 136 || Sbjct: 107218 at 107217
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 133916 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 133975 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 133976 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 134031 Query: 135 at 136 || Sbjct: 134032 at 134033 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 107212 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 107153 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107152 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107097 Query: 135 at 136 || Sbjct: 107096 at 107095
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 134623 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 134682 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 134683 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 134738 Query: 135 at 136 || Sbjct: 134739 at 134740 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 108003 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 107944 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107943 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107888 Query: 135 at 136 || Sbjct: 107887 at 107886
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 134354 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 134413 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 134414 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 134469 Query: 135 at 136 || Sbjct: 134470 at 134471 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 107784 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 107725 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107724 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107669 Query: 135 at 136 || Sbjct: 107668 at 107667
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 133883 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 133942 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 133943 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 133998 Query: 135 at 136 || Sbjct: 133999 at 134000 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 107179 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtc 107120 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 107119 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 107064 Query: 135 at 136 || Sbjct: 107063 at 107062
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 168 bits (85), Expect = 4e-39 Identities = 113/122 (92%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 1135 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 1076 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 1075 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggt 1020 Query: 135 at 136 || Sbjct: 1019 at 1018 Score = 155 bits (78), Expect = 7e-35 Identities = 78/78 (100%) Strand = Plus / Minus Query: 25 cctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagctt 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1702 cctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagctt 1643 Query: 85 ttcctgggagtatggcat 102 |||||||||||||||||| Sbjct: 1642 ttcctgggagtatggcat 1625
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 167 bits (84), Expect = 2e-38 Identities = 112/121 (92%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 87932 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccatttgttgaaggtc 87873 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||| Sbjct: 87872 gttcgagcttttcctgggagtatggcatgggt----tacttcagcgctgtagcgcttggt 87817 Query: 135 a 135 | Sbjct: 87816 a 87816 Score = 56.0 bits (28), Expect = 5e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||||||| |||||||||||||||||| Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggac 87809
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 167 bits (84), Expect = 2e-38 Identities = 87/88 (98%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 942 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtc 883 Query: 75 gttcgagcttttcctgggagtatggcat 102 |||||||||||||||||||||||||||| Sbjct: 882 gttcgagcttttcctgggagtatggcat 855
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 167 bits (84), Expect = 2e-38 Identities = 94/96 (97%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccc-ttttgttgaaggt 73 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1696 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggt 1637 Query: 74 cgttcgagcttttcctgggagtatggcatcggttac 109 ||||||||||||||||||||||||||||| |||||| Sbjct: 1636 cgttcgagcttttcctgggagtatggcattggttac 1601
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 161 bits (81), Expect = 1e-36 Identities = 87/89 (97%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77304 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggtc 77363 Query: 75 gttcgagcttttcctgggagtatggcatc 103 ||||||||||||| ||||||||||||||| Sbjct: 77364 gttcgagcttttcttgggagtatggcatc 77392
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 161 bits (81), Expect = 1e-36 Identities = 87/89 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5896 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggtc 5837 Query: 75 gttcgagcttttcctgggagtatggcatc 103 ||||||||||||| ||||||||||||||| Sbjct: 5836 gttcgagcttttcttgggagtatggcatc 5808
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 161 bits (81), Expect = 1e-36 Identities = 87/89 (97%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 22029 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggtc 22088 Query: 75 gttcgagcttttcctgggagtatggcatc 103 ||||||||||||| ||||||||||||||| Sbjct: 22089 gttcgagcttttcttgggagtatggcatc 22117
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 161 bits (81), Expect = 1e-36 Identities = 88/89 (98%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1713 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 1654 Query: 75 gttcg-agcttttcctgggagtatggcat 102 ||||| ||||||||||||||||||||||| Sbjct: 1653 gttcgaagcttttcctgggagtatggcat 1625
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 159 bits (80), Expect = 4e-36 Identities = 87/88 (98%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1707 gtattctctacctacccacctgtgtcggtttcgggtacaggta-ccttttgttgaaggtc 1649 Query: 75 gttcgagcttttcctgggagtatggcat 102 |||||||||||||||||||||||||||| Sbjct: 1648 gttcgagcttttcctgggagtatggcat 1621
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 155 bits (78), Expect = 7e-35 Identities = 156/182 (85%), Gaps = 5/182 (2%) Strand = Plus / Plus Query: 28 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 87 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 58140 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 58199 Query: 88 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 147 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 58200 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 58254 Query: 148 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 207 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58255 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 58314 Query: 208 ct 209 || Sbjct: 58315 ct 58316
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 155 bits (78), Expect = 7e-35 Identities = 156/182 (85%), Gaps = 5/182 (2%) Strand = Plus / Plus Query: 28 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 87 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 135351 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 135410 Query: 88 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 147 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 135411 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 135465 Query: 148 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 207 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135466 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 135525 Query: 208 ct 209 || Sbjct: 135526 ct 135527
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 151 bits (76), Expect = 1e-33 Identities = 92/96 (95%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1725 gtattctctacctacccacctgtgtcggtttcgggtaaaggtaaccttttgttgaaggtc 1666 Query: 75 gttcg-agcttttcctgggagtatggcatcggttac 109 ||||| ||||||||||||||||||||||| |||||| Sbjct: 1665 gttcgaagcttttcctgggagtatggcatgggttac 1630
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 151 bits (76), Expect = 1e-33 Identities = 110/121 (90%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1686 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgttgaaggtc 1627 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||| ||||||| |||||| ||| ||||||||| |||||||||||||| Sbjct: 1626 gttcgagcttttcttgggagtgtggcatgggt----tacttcagcaccgtagcgcctggt 1571 Query: 135 a 135 | Sbjct: 1570 a 1570
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 151 bits (76), Expect = 1e-33 Identities = 107/117 (91%), Gaps = 4/117 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 126761 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgttgaaggtc 126820 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 131 ||||||||||||| |||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 126821 gttcgagcttttcttgggagtatgacatgggt----tacttcagcgccatagcgcct 126873 Score = 151 bits (76), Expect = 1e-33 Identities = 107/117 (91%), Gaps = 4/117 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96686 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgttgaaggtc 96627 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 131 ||||||||||||| |||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 96626 gttcgagcttttcttgggagtatgacatgggt----tacttcagcgccatagcgcct 96574
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 149 bits (75), Expect = 4e-33 Identities = 81/83 (97%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4883 gtattttctacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 4942 Query: 75 gttcgagcttttcctgggagtat 97 ||||||||||||||||||||||| Sbjct: 4943 gttcgagcttttcctgggagtat 4965
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 149 bits (75), Expect = 4e-33 Identities = 93/99 (93%) Strand = Plus / Minus Query: 114 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 173 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 41597 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 41538 Query: 174 catacttcagcgctgcagcgcttggtactcggacctcgg 212 ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 41537 catacttcagcgccgcagcgcttggtactcgaacctcgg 41499
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 149 bits (75), Expect = 4e-33 Identities = 93/99 (93%) Strand = Plus / Minus Query: 114 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 173 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 148068 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 148009 Query: 174 catacttcagcgctgcagcgcttggtactcggacctcgg 212 ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 148008 catacttcagcgccgcagcgcttggtactcgaacctcgg 147970
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 149 bits (75), Expect = 4e-33 Identities = 90/95 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 ||||||||||||||||||||||||||||||||||||||||||||||| ||| | || ||| Sbjct: 1770 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtc 1711 Query: 75 gttcgagcttttcctgggagtatggcatcggttac 109 |||||||||||||||||||||||||||| |||||| Sbjct: 1710 gttcgagcttttcctgggagtatggcatgggttac 1676
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 145 bits (73), Expect = 6e-32 Identities = 85/89 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 6182 gtattctctacctacccacctgtgtcggtttccggtacaggtaccctcttgttgtaggtc 6123 Query: 75 gttcgagcttttcctgggagtatggcatc 103 |||||| |||||||||||||||||||||| Sbjct: 6122 gttcgaacttttcctgggagtatggcatc 6094
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 145 bits (73), Expect = 6e-32 Identities = 85/89 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 6182 gtattctctacctacccacctgtgtcggtttccggtacaggtaccctcttgttgtaggtc 6123 Query: 75 gttcgagcttttcctgggagtatggcatc 103 |||||| |||||||||||||||||||||| Sbjct: 6122 gttcgaacttttcctgggagtatggcatc 6094
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 143 bits (72), Expect = 3e-31 Identities = 84/88 (95%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2140 gtattctctacctacctacctgtgttagtttcgggtacaggtacccttttgttgaaggtc 2199 Query: 75 gttcgagcttttcctgggagtatggcat 102 ||||||||||||||| |||||||||||| Sbjct: 2200 gttcgagcttttcctaggagtatggcat 2227
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 139 bits (70), Expect = 4e-30 Identities = 108/121 (89%), Gaps = 11/121 (9%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 1244 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 |||||||| ||||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 1243 gttcgagc-------gggagtatggcatgggt----tacttcagcgccgtagcacctggt 1195 Query: 135 a 135 | Sbjct: 1194 a 1194
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 135 bits (68), Expect = 6e-29 Identities = 105/117 (89%), Gaps = 4/117 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 145595 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgtcaaaggtc 145536 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 131 ||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 145535 gttcgagcttttcttgggagtgtggcatgggt----tacttcggcgccgtagcgcct 145483 Score = 135 bits (68), Expect = 6e-29 Identities = 105/117 (89%), Gaps = 4/117 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 87256 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccacttgtcaaaggtc 87315 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 131 ||||||||||||| ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 87316 gttcgagcttttcttgggagtgtggcatgggt----tacttcggcgccgtagcgcct 87368
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 135 bits (68), Expect = 6e-29 Identities = 109/121 (90%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggt 73 |||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||| Sbjct: 51004 gtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggc 51063 Query: 74 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 133 ||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 51064 cgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctgg 51119 Query: 134 t 134 | Sbjct: 51120 t 51120 Score = 135 bits (68), Expect = 6e-29 Identities = 109/121 (90%), Gaps = 5/121 (4%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggt 73 |||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||| Sbjct: 38824 gtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggc 38765 Query: 74 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 133 ||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 38764 cgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctgg 38709 Query: 134 t 134 | Sbjct: 38708 t 38708
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 135 bits (68), Expect = 6e-29 Identities = 109/121 (90%), Gaps = 5/121 (4%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggt 73 |||||||||||||||||||||||||||||||| ||||||||| |||||||| || |||| Sbjct: 5752 gtattctctacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggc 5693 Query: 74 cgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctgg 133 ||||||||||||||| ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 5692 cgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctgg 5637 Query: 134 t 134 | Sbjct: 5636 t 5636
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 129 bits (65), Expect = 4e-27 Identities = 105/118 (88%), Gaps = 4/118 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| Sbjct: 137581 gtattctctacctacccacctgtgtcggtttcaggtacaggtacccactcgttgaaggtc 137640 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 132 ||||| ||||||| ||||||| |||||| || |||||||||||||||||||||| Sbjct: 137641 gttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcgcctg 137694 Score = 129 bits (65), Expect = 4e-27 Identities = 105/118 (88%), Gaps = 4/118 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| Sbjct: 84296 gtattctctacctacccacctgtgtcggtttcaggtacaggtacccactcgttgaaggtc 84237 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 132 ||||| ||||||| ||||||| |||||| || |||||||||||||||||||||| Sbjct: 84236 gttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcgcctg 84183
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 127 bits (64), Expect = 1e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 114528 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtttaaggtc 114587 Query: 75 gttcgagcttttcctgggagtatggcat 102 ||||||||||||| ||||||| |||||| Sbjct: 114588 gttcgagcttttcttgggagtgtggcat 114615 Score = 127 bits (64), Expect = 1e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 87592 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgtttaaggtc 87533 Query: 75 gttcgagcttttcctgggagtatggcat 102 ||||||||||||| ||||||| |||||| Sbjct: 87532 gttcgagcttttcttgggagtgtggcat 87505
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 127 bits (64), Expect = 1e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| Sbjct: 144870 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgttgaaggtc 144929 Query: 75 gttcgagcttttcctgggagtatggcat 102 ||||||||||||| ||||||| |||||| Sbjct: 144930 gttcgagcttttcttgggagtgtggcat 144957 Score = 127 bits (64), Expect = 1e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| Sbjct: 113592 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgttgaaggtc 113533 Query: 75 gttcgagcttttcctgggagtatggcat 102 ||||||||||||| ||||||| |||||| Sbjct: 113532 gttcgagcttttcttgggagtgtggcat 113505
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 127 bits (64), Expect = 1e-26 Identities = 107/121 (88%), Gaps = 4/121 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 116465 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgttaaaggtc 116524 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||| ||| ||| |||||| | | ||||||||| |||||||||||||| Sbjct: 116525 gttcgagcttttcttggaagtgtggcattgat----tacttcagcaccgtagcgcctggt 116580 Query: 135 a 135 | Sbjct: 116581 a 116581 Score = 127 bits (64), Expect = 1e-26 Identities = 107/121 (88%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 91637 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgttaaaggtc 91578 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||| ||| ||| |||||| | | ||||||||| |||||||||||||| Sbjct: 91577 gttcgagcttttcttggaagtgtggcattgat----tacttcagcaccgtagcgcctggt 91522 Query: 135 a 135 | Sbjct: 91521 a 91521
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 121 bits (61), Expect = 9e-25 Identities = 107/122 (87%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 5574 gtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtc 5515 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| || Sbjct: 5514 gttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagt 5459 Query: 135 at 136 || Sbjct: 5458 at 5457
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 121 bits (61), Expect = 9e-25 Identities = 107/122 (87%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 1684 gtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtc 1625 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| || Sbjct: 1624 gttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagt 1569 Query: 135 at 136 || Sbjct: 1568 at 1567
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 121 bits (61), Expect = 9e-25 Identities = 107/122 (87%), Gaps = 4/122 (3%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 149561 gtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtc 149620 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| || Sbjct: 149621 gttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagt 149676 Query: 135 at 136 || Sbjct: 149677 at 149678 Score = 121 bits (61), Expect = 9e-25 Identities = 107/122 (87%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 119105 gtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtc 119046 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| || Sbjct: 119045 gttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagt 118990 Query: 135 at 136 || Sbjct: 118989 at 118988
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 121 bits (61), Expect = 9e-25 Identities = 107/122 (87%), Gaps = 4/122 (3%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 1684 gtattctctacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtc 1625 Query: 75 gttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 134 ||||||||||||| ||||||| |||||| || ||||||||||||||||| ||| || Sbjct: 1624 gttcgagcttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagt 1569 Query: 135 at 136 || Sbjct: 1568 at 1567
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 119 bits (60), Expect = 4e-24 Identities = 81/88 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 1645 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgcttaaggtc 1586 Query: 75 gttcgagcttttcctgggagtatggcat 102 ||||||||||||| ||||||| |||||| Sbjct: 1585 gttcgagcttttcttgggagtgtggcat 1558 Score = 40.1 bits (20), Expect = 2.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 tacttcagcgctgcagcgcttggtactcggac 207 ||||||||| | | |||||||||||||||||| Sbjct: 1553 tacttcagcaccgtagcgcttggtactcggac 1522
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 117 bits (59), Expect = 1e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||| Sbjct: 1684 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccacttgttaatggtc 1625 Query: 75 gttcgagcttttcctgggagtatggcatcggttac 109 ||||||||||||| ||| ||| |||||| |||||| Sbjct: 1624 gttcgagcttttcttggaagtgtggcattggttac 1590
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 103 bits (52), Expect = 2e-19 Identities = 79/88 (89%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtc 74 |||||||||||||||| ||||||||||||||||||||||||||||| | | | |||||| Sbjct: 1690 gtattctctacctacctacctgtgtcggtttcgggtacaggtacccactcgcttaaggtc 1631 Query: 75 gttcgagcttttcctgggagtatggcat 102 ||||||||||||| |||||| |||||| Sbjct: 1630 gttcgagcttttctcgggagtgtggcat 1603
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 95.6 bits (48), Expect = 5e-17 Identities = 51/52 (98%) Strand = Plus / Minus Query: 16 tattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 67 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1691 tattctctacctacccacctgtgttggtttcgggtacaggtacccttttgtt 1640 Score = 65.9 bits (33), Expect = 5e-08 Identities = 58/66 (87%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 69 aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 128 |||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| | Sbjct: 1625 aaggtcattcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagtg 1570 Query: 129 cctggt 134 |||||| Sbjct: 1569 cctggt 1564
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 87.7 bits (44), Expect = 1e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtac 58 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1703 gtattctctacctacccacctgtgtcggtttcgggtacaggtac 1660
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 87.7 bits (44), Expect = 1e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtac 58 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1716 gtattctctacctacccacctgtgtcggtttcgggtacaggtac 1673
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 85.7 bits (43), Expect = 5e-14 Identities = 46/47 (97%) Strand = Plus / Minus Query: 166 acggggctcatacttcagcgctgcagcgcttggtactcggacctcgg 212 |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcgg 15847
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 83.8 bits (42), Expect = 2e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1664 gtattctctacctacctacctgtgttggtttcgggtacaggtaccctttt 1615
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 81.8 bits (41), Expect = 8e-13 Identities = 44/45 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtacc 59 |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1841 gtattctcaacctacccacctgtgtcggtttcgggtacaggtacc 1797
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 79.8 bits (40), Expect = 3e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1692 tagtattctctacctacctacctgtgtcggtttcgggtacaggt 1649
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 79.8 bits (40), Expect = 3e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 193522 tagtattctctacctacctacctgtgtcggtttcgggtacaggt 193479 Score = 79.8 bits (40), Expect = 3e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 143260 tagtattctctacctacctacctgtgtcggtttcgggtacaggt 143303
>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2610 Score = 79.8 bits (40), Expect = 3e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1651 tagtattctctacctacctacctgtgtcggtttcgggtacaggt 1608
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 79.8 bits (40), Expect = 3e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtac 58 |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1571 gtattctctacctacccacctgtgtcggtttcaggtacaggtac 1528
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 77.8 bits (39), Expect = 1e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2000 gtattctctacctacccacctgtgtcggtttctggtacaggta 1958
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 77.8 bits (39), Expect = 1e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| ||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 17400 gccccttagtattctctacttacccacctgtgtcggtttagggtacaggta 17450 Score = 77.8 bits (39), Expect = 1e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| ||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 3466 gccccttagtattctctacttacccacctgtgtcggtttagggtacaggta 3416
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 77.8 bits (39), Expect = 1e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 138168 gccccttagtatactctacctacccacctgtgtcggtttagggtacaggta 138118 Score = 77.8 bits (39), Expect = 1e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 47376 gccccttagtatactctacctacccacctgtgtcggtttagggtacaggta 47426
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 77.8 bits (39), Expect = 1e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1688 gtattctctacctacctacctgtgtcggtttcgggtacaggta 1646
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 77.8 bits (39), Expect = 1e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 3457 gtattctctacctacctacctgtgtcggtttcgggtacaggta 3415
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 77.8 bits (39), Expect = 1e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtaca 53 ||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3510 gccccttagtattctctacctacccacctgtgtcggtttggggtaca 3464
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 75.8 bits (38), Expect = 5e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||| ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1262 gccccttagtattctctaccttcctacctgtgtcggtttcgggtacaggt 1213
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 75.8 bits (38), Expect = 5e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 |||||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 1657 gtattctctacctacctacctgtgttggttttgggtacaggtaccctttt 1608 Score = 46.1 bits (23), Expect = 0.044 Identities = 26/27 (96%) Strand = Plus / Minus Query: 76 ttcgagcttttcctgggagtatggcat 102 |||||||||||||||||||||| |||| Sbjct: 1588 ttcgagcttttcctgggagtatagcat 1562
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 75.8 bits (38), Expect = 5e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||| |||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 1696 gccccttagtattctctaccaacccacctgtgtcggtttggggtacaggt 1647
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 75.8 bits (38), Expect = 5e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 |||||||||||||||||||||||||||||||| |||| | |||||||||| Sbjct: 1739 gtattctctacctacccacctgtgtcggtttctggtaaaagtaccctttt 1690
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 75.8 bits (38), Expect = 5e-11 Identities = 47/50 (94%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||| ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 3328659 gccccttagtattctctaccttcctacctgtgtcggtttcgggtacaggt 3328610 Score = 75.8 bits (38), Expect = 5e-11 Identities = 47/50 (94%) Strand = Plus / Plus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||| ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 2450069 gccccttagtattctctaccttcctacctgtgtcggtttcgggtacaggt 2450118
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 73.8 bits (37), Expect = 2e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 3175 gccccttagtattctctacttccccacctgtgtcggtttcgggtacagg 3127
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 73.8 bits (37), Expect = 2e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 3176 gccccttagtattctctacttccccacctgtgtcggtttcgggtacagg 3128
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 73.8 bits (37), Expect = 2e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 1259 gccccttagtattctctacttccccacctgtgtcggtttcgggtacagg 1211
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 73.8 bits (37), Expect = 2e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1641 gtattctctacctacccacctgtgtcggttttgggtacagg 1601
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 73.8 bits (37), Expect = 2e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4675 gtattctctacctacccacctgtgtcggttttgggtacagg 4635
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 73.8 bits (37), Expect = 2e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1641 gtattctctacctacccacctgtgtcggttttgggtacagg 1601
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 73.8 bits (37), Expect = 2e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||| ||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 113747 gccccttagtattctctacttacccacctgtgtcggttttgggtacagg 113795 Score = 73.8 bits (37), Expect = 2e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||| ||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 3770 gccccttagtattctctacttacccacctgtgtcggttttgggtacagg 3722
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 71.9 bits (36), Expect = 8e-10 Identities = 48/52 (92%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggtac 58 ||||| ||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct: 1717 gccccttagtattctctacttgcccacctgtgtcggtttggggtacaggtac 1666
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 71.9 bits (36), Expect = 8e-10 Identities = 42/44 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtac 58 |||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1645 gtatactctacctacctacctgtgtcggtttcgggtacaggtac 1602
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 71.9 bits (36), Expect = 8e-10 Identities = 42/44 (95%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtac 58 |||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 114018 gtatactctacctacctacctgtgtcggtttcgggtacaggtac 114061 Score = 71.9 bits (36), Expect = 8e-10 Identities = 42/44 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtac 58 |||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 87970 gtatactctacctacctacctgtgtcggtttcgggtacaggtac 87927
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 7402 gccccttagtatactctacctacccacctgtgtcggtttatggtacaggta 7352
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 4463 gccccttagtatactctacctacccacctgtgtcggtttatggtacaggta 4413
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1914 gccccttagtattctctaccaacctacctgtgtcggtttcaggtacaggta 1864
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 1753 gccccttagtatactctacctacccacctgtgtcggtttatggtacaggta 1703
>emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL gene, exon 1 Length = 2749 Score = 69.9 bits (35), Expect = 3e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1914 gccccttagtattctctaccaacctacctgtgtcggtttcaggtacaggta 1864
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 169802 gtattctctacttacctacctgtgtcggtttcgggtacaggt 169843 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 123124 gtattctctacttacctacctgtgtcggtttcgggtacaggt 123083
>gb|AY033325.1| Uncultured alpha proteobacteria MB13F01 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3663 Score = 67.9 bits (34), Expect = 1e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||| |||||||||||||||||||||||| Sbjct: 3396 gtattctctacctgcccacctgtgtcggtttcgggtac 3359
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 67.9 bits (34), Expect = 1e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||| |||||||||||||||||||||||| Sbjct: 1181 gtattctctacctccccacctgtgtcggtttcgggtac 1144
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1607 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 |||||||||||||||| || ||||| ||||||||||| |||||||||||| Sbjct: 1632 gtattctctacctacctacttgtgttggtttcgggtataggtaccctttt 1583 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 76 ttcgagcttttcctgggagtat 97 |||||||||||||||||||||| Sbjct: 1572 ttcgagcttttcctgggagtat 1551
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1607 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1607 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1607 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccctttt 64 ||||||||||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||| |||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 1756 gccccttagtattctctacctacctacctgtgtcggtttatggtacaggt 1707
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 67.9 bits (34), Expect = 1e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||| |||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1857 gccccttagtattctctaccaacctacctgtgtcggtttcaggtacaggt 1808
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggt 56 |||||||||||||||| |||||||||||||| |||||||||| Sbjct: 1619 gtattctctacctacctacctgtgtcggtttagggtacaggt 1578
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggt 56 ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 1715 gtattctctacttacctacctgtgtcggtttcgggtacaggt 1674
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 67.9 bits (34), Expect = 1e-08 Identities = 71/82 (86%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggt-acccttttg 65 ||||| |||||||||||||| ||| ||||||||||||||| ||||||||| | || ||| Sbjct: 1920 gccccttagtattctctaccaacctacctgtgtcggtttcaggtacaggtgattctgttg 1861 Query: 66 ttgaaggtcgttcgagcttttc 87 ||||| | ||||||||||||| Sbjct: 1860 ttgaatggtgttcgagcttttc 1839
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggt 56 |||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 3393 gtatactctacctacctacctgtgtcggtttcgggtacaggt 3352
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 8 ccccctagtattctctacctacccacctgtgtcggtttcgggtaca 53 |||| ||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 2156 ccccttagtattctctacttacccacctgtgtcggttttgggtaca 2111
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1262 gtattctctaccaccccacctgtgtcggtttcgggtacagg 1222
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1634 gtattctctacccacccacctgtgtcggtctcgggtacagg 1594
>gb|AF086621.2|PHYTORNA1 Loofah witches'-broom phytoplasma tRNA-Ile gene, complete sequence; 23S ribosomal RNA gene, partial sequence; 16S ribosomal RNA and 23S ribosomal RNA genes, complete sequence; tRNA-Ile gene, complete sequence; 5S ribosomal RNA gene, complete sequence; and tRNA-Val and tRNA-Asn genes, complete sequence Length = 7305 Score = 65.9 bits (33), Expect = 5e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 3890 tagtattctctaccttcccacctgtgtcggtttacggtacaggta 3846
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1647 gtattctctacccacccacctgtgtcggtctcgggtacagg 1607
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||||||||||| |||||||||||||||| ||||||||||| Sbjct: 6221 gtattctctacccacccacctgtgtcggtctcgggtacagg 6181
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||||||||||||||| ||||||||||||||| |||||||| Sbjct: 1647 gtattctctacctacctacctgtgtcggtttcaggtacagg 1607 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 72 gtcgttcgagcttttcctgggagtatggcatcggttac 109 |||||||||||||||| |||||||||||||| |||||| Sbjct: 1589 gtcgttcgagcttttcttgggagtatggcataggttac 1552
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||||||||||| ||||||||||||||||||||||||||| Sbjct: 357103 gtattctctaccaccccacctgtgtcggtttcgggtacagg 357063
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||| ||||||||||| |||||||||||||||||||||||| Sbjct: 3188 gtatactctacctacctacctgtgtcggtttcgggtacagg 3148
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||||||||||||||| ||||||||||||||| |||||||| Sbjct: 123618 gtattctctacctacctacctgtgtcggtttcaggtacagg 123658 Score = 65.9 bits (33), Expect = 5e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacagg 55 |||||||||||||||| ||||||||||||||| |||||||| Sbjct: 96248 gtattctctacctacctacctgtgtcggtttcaggtacagg 96208 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 72 gtcgttcgagcttttcctgggagtatggcatcggttac 109 |||||||||||||||| |||||||||||||| |||||| Sbjct: 123676 gtcgttcgagcttttcttgggagtatggcataggttac 123713 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 72 gtcgttcgagcttttcctgggagtatggcatcggttac 109 |||||||||||||||| |||||||||||||| |||||| Sbjct: 96190 gtcgttcgagcttttcttgggagtatggcataggttac 96153
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 65.9 bits (33), Expect = 5e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||| |||||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 190566 gccccttagtatactctacctacctacctgtgtcggtttagggtacagg 190518 Score = 65.9 bits (33), Expect = 5e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||| |||||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 151993 gccccttagtatactctacctacctacctgtgtcggtttagggtacagg 151945
>gb|AY264666.1| Arsenophonus endosymbiont of Aleyrodes elevatus 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4613 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtaca 53 ||||||||||||||| |||||||||||||||| ||||||| Sbjct: 3696 agtattctctacctaaccacctgtgtcggtttggggtaca 3657
>gb|AY264664.1| Arsenophonus endosymbiont of Aleurodicus dispersus 16S ribosomal RNA gene, partial sequence; tRNA-Ala gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4703 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 3787 tagtattctctacctaaccacctgtgtcggtttggggtac 3748
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 4076278 tagtattctctacctaaccacctgtgtcggtttggggtac 4076317 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 1660238 tagtattctctacctaaccacctgtgtcggtttggggtac 1660199 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 564259 tagtattctctacctaaccacctgtgtcggtttggggtac 564220 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 558418 tagtattctctacctaaccacctgtgtcggtttggggtac 558379 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 360559 tagtattctctacctaaccacctgtgtcggtttggggtac 360520 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 354708 tagtattctctacctaaccacctgtgtcggtttggggtac 354669 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 53955 tagtattctctacctaaccacctgtgtcggtttggggtac 53916 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 48111 tagtattctctacctaaccacctgtgtcggtttggggtac 48072 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 38707 tagtattctctacctaaccacctgtgtcggtttggggtac 38668
>gb|AF410938.1| Bartonella clarridgeiae 23S ribosomal RNA gene, partial sequence Length = 2449 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1461 tagtattctctacctgtccacctgtgtcggtttcgggtac 1422
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||||| |||||||||||||||| |||||| Sbjct: 540805 tagtattctctacctaaccacctgtgtcggtttggggtac 540844
>gb|AY744382.1| Buchnera aphidicola (Cinara cedri) genomic sequence Length = 28688 Score = 63.9 bits (32), Expect = 2e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 13 tagtattctctacctacccacctgtgtcggtttcgggtac 52 |||||| ||||||||| ||||||||||||||||||||||| Sbjct: 935 tagtatactctacctaaccacctgtgtcggtttcgggtac 974
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||| |||| || |||||||||||||||||||||||||| Sbjct: 1256 gtattctcaacctccctacctgtgtcggtttcgggtacaggta 1214
>gb|AY587142.1| Arsenophonus endosymbiont of Aleurodicus dugesii 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4587 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3669 agtattctctacctaaccacctgtgtcggtttggggtac 3631
>gb|AY587141.1| Arsenophonus endosymbiont of Aleyrodes proletella 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4599 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3682 agtattctctacctaaccacctgtgtcggtttggggtac 3644
>gb|AY587140.1| Arsenophonus endosymbiont of Trialeurodes hutchingsi 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4611 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3689 agtattctctacctaaccacctgtgtcggtttggggtac 3651
>gb|AY264677.1| Arsenophonus endosymbiont of Bemisia sp. 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 4496 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3576 agtattctctacctaaccacctgtgtcggtttggggtac 3538
>gb|AY264674.1| Arsenophonus nasoniae 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4861 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3944 agtattctctacctaaccacctgtgtcggtttggggtac 3906
>gb|AY264673.1| Arsenophonus endosymbiont of Australiococcus greville 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4606 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3689 agtattctctacctaaccacctgtgtcggtttggggtac 3651
>gb|AY264671.1| Arsenophonus endosymbiont of Tetraleurodes mori 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4617 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3700 agtattctctacctaaccacctgtgtcggtttggggtac 3662
>gb|AY264670.1| Arsenophonus endosymbiont of Tetraleurodes acaciae 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4692 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3775 agtattctctacctaaccacctgtgtcggtttggggtac 3737
>gb|AY264669.1| Arsenophonus endosymbiont of Siphoninus phillyreae 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4860 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3943 agtattctctacctaaccacctgtgtcggtttggggtac 3905
>gb|AY264668.1| Arsenophonus endosymbiont of Neomaskellia andropogonis 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4607 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3690 agtattctctacctaaccacctgtgtcggtttggggtac 3652
>gb|AY264667.1| Arsenophonus endosymbiont of Dialeurodes hongkongensis 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4607 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3690 agtattctctacctaaccacctgtgtcggtttggggtac 3652
>gb|AY264665.1| Arsenophonus endosymbiont of Aleuroplatus gelatinosus 16S ribosomal RNA gene, partial sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4779 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3861 agtattctctacctaaccacctgtgtcggtttggggtac 3823
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1887 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1845
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 1821 gtatactctacctacctacctgtgtcggtttcgggtacgggta 1779
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 3110 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 3068
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 3835 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 3793
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1731 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1689
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1741 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1699
>gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CecI gene Length = 7283 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1967 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1925
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1812 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1770
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1733 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1691
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||| ||||||| ||| |||||||||||||||||||||||||| Sbjct: 1736 gtatactctacccacctacctgtgtcggtttcgggtacaggta 1694
>gb|AF263562.1| Secondary endosymbiont of Heteropsylla texana 16S ribosomal RNA gene, partial sequence; intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4572 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 3655 agtattctctacctaaccacctgtgtcggtttggggtac 3617
>gb|AF263561.1| Secondary endosymbiont of Glycaspis brimblecombei 23S rRNA pseudouridine synthase (rluD) gene, partial cds; hypothetical protein YfiH (yfiH) and ClpB protease (clpB) genes, complete cds; 16S ribosomal RNA gene, complete sequence; intergenic spacer, complete sequence; tRNA-Glu gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 9906 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 14 agtattctctacctacccacctgtgtcggtttcgggtac 52 ||||||||||||||| |||||||||||||||| |||||| Sbjct: 8642 agtattctctacctaaccacctgtgtcggtttggggtac 8604
>emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL gene, exon 1 Length = 2676 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1741 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1699
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1731 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1689
>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2 Length = 659 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 386 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 344
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 61.9 bits (31), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||| |||||| |||| |||||||||||||| ||||||||||| Sbjct: 189643 gccccttagtatactctacttacctacctgtgtcggtttagggtacaggta 189593 Score = 58.0 bits (29), Expect = 1e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacagg 55 ||||| |||||| |||||| |||| |||||||||||||| ||||||||| Sbjct: 151200 gccccttagtatactctacttacctacctgtgtcggtttagggtacagg 151152
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 61.9 bits (31), Expect = 7e-07 Identities = 46/51 (90%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtttcgggtacaggta 57 ||||| |||||| |||||| |||| |||||||||||||| ||||||||||| Sbjct: 3332 gccccttagtatactctacttacctacctgtgtcggtttagggtacaggta 3282
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1780 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1738
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 61.9 bits (31), Expect = 7e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggta 57 |||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 1680 gtattctctaccaacctacctgtgtcggtttcaggtacaggta 1638
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 321227 gtattctctaccaccccacctgtgtcggtttcgggtac 321190
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 2137162 gtattctctaccaccccacctgtgtcggtttcgggtac 2137199 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 477698 gtattctctaccaccccacctgtgtcggtttcgggtac 477661
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 1774860 gtattctctaccaccccacctgtgtcggtttcgggtac 1774897 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 377209 gtattctctaccaccccacctgtgtcggtttcgggtac 377172
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggt 56 |||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 154511 gtattctctaccaacctacctgtgtcggtttcaggtacaggt 154552 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggt 56 |||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 79381 gtattctctaccaacctacctgtgtcggtttcaggtacaggt 79340
>gb|AY033324.1| Uncultured alpha proteobacterium MB11C09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4073 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||| |||||||||||||||| |||||| Sbjct: 3805 gtattctctacctatccacctgtgtcggtttagggtac 3768
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 3650 gtattctctaccaccccacctgtgtcggtttcgggtac 3613
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 3651 gtattctctaccaccccacctgtgtcggtttcgggtac 3614
>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4141 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 3875 gtattctctaccaccccacctgtgtcggtttcgggtac 3838
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 3872 gtattctctaccaccccacctgtgtcggtttcgggtac 3835
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 60.0 bits (30), Expect = 3e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtacaggtaccc 60 ||||||||||||| || |||||||| |||||| ||||||||||||| Sbjct: 1608 gtattctctacctccctacctgtgttggtttcaggtacaggtaccc 1563
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtt 44 ||||| |||||| ||||||||||||||||||||||||| Sbjct: 3386 gccccttagtatactctacctacccacctgtgtcggtt 3349
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 19230 gtattctctaccaccccacctgtgtcggtttcgggtac 19267
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 984 gtattctctaccaccccacctgtgtcggtttcgggtac 1021
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome Length = 119704 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 7 gccccctagtattctctacctacccacctgtgtcggtt 44 ||||| |||||| ||||||||||||||||||||||||| Sbjct: 48716 gccccttagtatactctacctacccacctgtgtcggtt 48753 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 7 gccccctagtattctctacctacccacctgtgtcggtt 44 ||||| |||||| ||||||||||||||||||||||||| Sbjct: 5643 gccccttagtatactctacctacccacctgtgtcggtt 5606
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 1667102 gtattctctaccaccccacctgtgtcggtttcgggtac 1667065
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 316716 gtattctctaccaccccacctgtgtcggtttcgggtac 316679
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 338415 gtattctctaccaccccacctgtgtcggtttcgggtac 338452 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||| |||||||||||||||||||||||| Sbjct: 131475 gtattctctaccaccccacctgtgtcggtttcgggtac 131512
>gb|AF476108.1| Secondary endosymbiont of Planococcus ficus 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 4513 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||| |||||||||||||||| |||||| Sbjct: 3593 gtattctctacctaaccacctgtgtcggttttgggtac 3556
>gb|AF476107.1| Secondary endosymbiont of Planococcus citri 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 4590 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||||||||||||| |||||||||||||||| |||||| Sbjct: 3668 gtattctctacctaaccacctgtgtcggttttgggtac 3631
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||| ||||||| ||||||||||||||||||||||||| Sbjct: 2050288 gtatcctctacccacccacctgtgtcggtttcgggtac 2050325 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 15 gtattctctacctacccacctgtgtcggtttcgggtac 52 |||| ||||||| ||||||||||||||||||||||||| Sbjct: 1451213 gtatcctctacccacccacctgtgtcggtttcgggtac 1451176 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,069,129 Number of Sequences: 3902068 Number of extensions: 1069129 Number of successful extensions: 69794 Number of sequences better than 10.0: 990 Number of HSP's better than 10.0 without gapping: 1011 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 64922 Number of HSP's gapped (non-prelim): 4649 length of query: 212 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 190 effective length of database: 17,147,199,772 effective search space: 3257967956680 effective search space used: 3257967956680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)