ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal12c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 371 1e-99
2gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare str... 371 1e-99
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 371 1e-99
4emb|CR555306.1| Azoarcus sp. EbN1 complete genome 80 7e-12
5gb|AY107917.1| Zea mays PCO071987 mRNA sequence 78 3e-11
6gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 76 1e-10
7emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 76 1e-10
8gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 76 1e-10
9gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 74 4e-10
10gb|AE015451.1| Pseudomonas putida KT2440 complete genome 74 4e-10
11gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 72 2e-09
12gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 70 7e-09
13gb|AF241171.1|AF241171 Pseudomonas aeruginosa pathogenicity isla... 70 7e-09
14gb|AE004836.1| Pseudomonas aeruginosa PAO1, section 397 of 529 o... 70 7e-09
15gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 68 3e-08
16gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete s... 66 1e-07
17gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 66 1e-07
18dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 64 4e-07
19gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 64 4e-07
20gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 64 4e-07
21dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 64 4e-07
22gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
23ref|NM_183955.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
24gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
26dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
27dbj|AK063921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
28gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 56 1e-04
29gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 56 1e-04
30gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 56 1e-04
31gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 56 1e-04
32ref|XM_463896.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
34dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
35dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
36emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 52 0.002
37dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 52 0.002
38dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 50 0.006
39ref|XM_493818.1| Oryza sativa (japonica cultivar-group), predic... 48 0.025
40gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome ... 48 0.025
41gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 48 0.025
42emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 48 0.025
43dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
44dbj|AK110783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
45dbj|AK070181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
46gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 48 0.025
47dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
48gb|AY502075.1| Rhodococcus sp. DK17 plasmid pDK2, partial sequence 46 0.098
49gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 geno... 46 0.098
50gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, com... 46 0.098
51dbj|AB107790.2| Rhodococcus sp. RHA1 bphB1, bphS, bphT for cis-b... 46 0.098
52dbj|AK101765.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.098
53dbj|AK066406.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.098
54gb|AC093531.2| Homo sapiens chromosome 5 clone RP11-405L7, compl... 42 1.5
55gb|AC093537.2| Homo sapiens chromosome 5 clone RP11-8L21, comple... 42 1.5
56gb|AF098986.1| Caenorhabditis elegans cosmid C36C9, complete seq... 42 1.5
57ref|NM_075907.1| Caenorhabditis elegans T BoX family member (tbx... 42 1.5
58dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 1.5
59gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 6.1
60ref|NG_001336.2| Homo sapiens T cell receptor gamma locus (TRG@)... 40 6.1
61gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complet... 40 6.1
62gb|AC158904.4| Mus musculus chromosome 19, clone RP23-16C24, com... 40 6.1
63gb|AC125607.6| Homo sapiens 3 BAC RP11-294L13 (Roswell Park Canc... 40 6.1
64gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell P... 40 6.1
65gb|AC021760.9| Homo sapiens chromosome 8, clone RP11-433L7, comp... 40 6.1
66gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complet... 40 6.1
67gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus,... 40 6.1
68gb|AC037433.6|AC037433 Homo sapiens chromosome 15, clone RP11-92... 40 6.1
69gb|AC023732.5| Drosophila melanogaster X BAC RP98-42M11 (Roswell... 40 6.1
70gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, comp... 40 6.1
71emb|AL670943.14| Mouse DNA sequence from clone RP23-233G6 on chr... 40 6.1
72gb|AC119176.10| Mus musculus chromosome 1, clone RP24-359F24, co... 40 6.1
73gb|AC009399.5|AC009399 Homo sapiens chromosome 14 clone RP11-368... 40 6.1
74gb|AF107885.2|DJ270M14 Homo sapiens chromosome 14q24.3 clone BAC... 40 6.1
75gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 ... 40 6.1
76gb|AC102548.11| Mus musculus chromosome 19, clone RP23-135H14, c... 40 6.1 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  371 bits (187), Expect = 1e-99
 Identities = 349/403 (86%)
 Strand = Plus / Minus

                                                                            
Query: 12       ggattatagcagatcaaaagaaatgttctttcaaaaagccacttgtaatagttattggtg 71
                ||||||| || || ||||||||| |  |||||||| |||||||| |||| ||||||||||
Sbjct: 10790158 ggattattgcggagcaaaagaaaggagctttcaaacagccacttctaattgttattggtg 10790099

                                                                            
Query: 72       atcatacctgtgatccttcagccctccaagatgctctgagaacaggggcaatcgaatatg 131
                |||| || ||||||||     ||||| ||  |||| |||| | ||| || || || ||||
Sbjct: 10790098 atcaaacttgtgatcccgtgtccctcaaaagtgctttgagtaaaggagccattgagtatg 10790039

                                                                            
Query: 132      agaagttcttggaaactggcgaccctgaatttgcatggaaaccaccgcaggatgaatgga 191
                || ||||  ||||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 10790038 aggagtttctggaaactggcgatcctgaatttgcctggaaaccaccacaggatgaatgga 10789979

                                                                            
Query: 192      agagtattgccttaggttatacttctggaacaacatctagcccaaagggcgtggttttgc 251
                ||||||||||||||||||||||||| || ||||| || | |||||||||||||||  |||
Sbjct: 10789978 agagtattgccttaggttatacttccgggacaacttccaacccaaagggcgtggtactgc 10789919

                                                                            
Query: 252      atcacaggggtgcttacctaatgtcactcagtggtgctcttgtatggaaaatgaacgacg 311
                |||||||||||||||||||||||||||| ||||||||||| ||||||  |||||| || |
Sbjct: 10789918 atcacaggggtgcttacctaatgtcactgagtggtgctctggtatggggaatgaatgaag 10789859

                                                                            
Query: 312      gcgcggtttacctgtggactttgccgatgttccactgcaacggctggtgctatacatgga 371
                |||| |||||  ||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 10789858 gcgctgtttatttgtggactttgccgatgttccactgtaatggctggtgctatacatgga 10789799

                                                           
Query: 372      cgcttgctgctatctgtggaacaagcatatgtcttcgtcaggt 414
                | ||||||||| | |||||||||||||| ||||||||||||||
Sbjct: 10789798 cacttgctgctctttgtggaacaagcatttgtcttcgtcaggt 10789756



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                      
Query: 320     tacctgtggactttgccgatgttccactgcaacggctgg 358
               |||||||||||| |||| |||||||||||||||||||||
Sbjct: 1867607 tacctgtggactgtgcccatgttccactgcaacggctgg 1867569



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 410      caggtcacagcgaaggctatcttctcagcgatagccaacca 450
                ||||| ||||| ||||| |||||||| ||||||||||||||
Sbjct: 10788920 caggttacagcaaaggccatcttctcggcgatagccaacca 10788880



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacgg 354
               |||| |||||||||||  |||| |||||||||||||||||
Sbjct: 1686665 cggtgtacctgtggacgctgcccatgttccactgcaacgg 1686704



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                            
Query: 320      tacctgtggactttgccgatgttccactgcaacggctggtgctatacatggacgcttgct 379
                |||||||||||| |||| |||||||| || || || ||||| || || ||| |  | |||
Sbjct: 10797292 tacctgtggactctgcccatgttccattgtaatggttggtgttacacttgggcaatggct 10797233

                                                   
Query: 380      gctatctgtggaacaagcatatgtcttcgtcaggt 414
                || || |||||||| | |||||||||||| |||||
Sbjct: 10797232 gcgatgtgtggaaccaacatatgtcttcgccaggt 10797198



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                              
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
               |||| ||||| |||||  |||| ||||||||||||||||| ||||||
Sbjct: 1863686 cggtgtacctctggaccgtgcccatgttccactgcaacgggtggtgc 1863640
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>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08,
             from chromosome 3, complete sequence
          Length = 108833

 Score =  371 bits (187), Expect = 1e-99
 Identities = 349/403 (86%)
 Strand = Plus / Plus

                                                                         
Query: 12    ggattatagcagatcaaaagaaatgttctttcaaaaagccacttgtaatagttattggtg 71
             ||||||| || || ||||||||| |  |||||||| |||||||| |||| ||||||||||
Sbjct: 64729 ggattattgcggagcaaaagaaaggagctttcaaacagccacttctaattgttattggtg 64788

                                                                         
Query: 72    atcatacctgtgatccttcagccctccaagatgctctgagaacaggggcaatcgaatatg 131
             |||| || ||||||||     ||||| ||  |||| |||| | ||| || || || ||||
Sbjct: 64789 atcaaacttgtgatcccgtgtccctcaaaagtgctttgagtaaaggagccattgagtatg 64848

                                                                         
Query: 132   agaagttcttggaaactggcgaccctgaatttgcatggaaaccaccgcaggatgaatgga 191
             || ||||  ||||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 64849 aggagtttctggaaactggcgatcctgaatttgcctggaaaccaccacaggatgaatgga 64908

                                                                         
Query: 192   agagtattgccttaggttatacttctggaacaacatctagcccaaagggcgtggttttgc 251
             ||||||||||||||||||||||||| || ||||| || | |||||||||||||||  |||
Sbjct: 64909 agagtattgccttaggttatacttccgggacaacttccaacccaaagggcgtggtactgc 64968

                                                                         
Query: 252   atcacaggggtgcttacctaatgtcactcagtggtgctcttgtatggaaaatgaacgacg 311
             |||||||||||||||||||||||||||| ||||||||||| ||||||  |||||| || |
Sbjct: 64969 atcacaggggtgcttacctaatgtcactgagtggtgctctggtatggggaatgaatgaag 65028

                                                                         
Query: 312   gcgcggtttacctgtggactttgccgatgttccactgcaacggctggtgctatacatgga 371
             |||| |||||  ||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 65029 gcgctgtttatttgtggactttgccgatgttccactgtaatggctggtgctatacatgga 65088

                                                        
Query: 372   cgcttgctgctatctgtggaacaagcatatgtcttcgtcaggt 414
             | ||||||||| | |||||||||||||| ||||||||||||||
Sbjct: 65089 cacttgctgctctttgtggaacaagcatttgtcttcgtcaggt 65131



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 410   caggtcacagcgaaggctatcttctcagcgatagccaacca 450
             ||||| ||||| ||||| |||||||| ||||||||||||||
Sbjct: 65967 caggttacagcaaaggccatcttctcggcgatagccaacca 66007



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                         
Query: 320   tacctgtggactttgccgatgttccactgcaacggctggtgctatacatggacgcttgct 379
             |||||||||||| |||| |||||||| || || || ||||| || || ||| |  | |||
Sbjct: 57595 tacctgtggactctgcccatgttccattgtaatggttggtgttacacttgggcaatggct 57654

                                                
Query: 380   gctatctgtggaacaagcatatgtcttcgtcaggt 414
             || || |||||||| | |||||||||||| |||||
Sbjct: 57655 gcgatgtgtggaaccaacatatgtcttcgccaggt 57689
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  371 bits (187), Expect = 1e-99
 Identities = 349/403 (86%)
 Strand = Plus / Minus

                                                                            
Query: 12       ggattatagcagatcaaaagaaatgttctttcaaaaagccacttgtaatagttattggtg 71
                ||||||| || || ||||||||| |  |||||||| |||||||| |||| ||||||||||
Sbjct: 10788259 ggattattgcggagcaaaagaaaggagctttcaaacagccacttctaattgttattggtg 10788200

                                                                            
Query: 72       atcatacctgtgatccttcagccctccaagatgctctgagaacaggggcaatcgaatatg 131
                |||| || ||||||||     ||||| ||  |||| |||| | ||| || || || ||||
Sbjct: 10788199 atcaaacttgtgatcccgtgtccctcaaaagtgctttgagtaaaggagccattgagtatg 10788140

                                                                            
Query: 132      agaagttcttggaaactggcgaccctgaatttgcatggaaaccaccgcaggatgaatgga 191
                || ||||  ||||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 10788139 aggagtttctggaaactggcgatcctgaatttgcctggaaaccaccacaggatgaatgga 10788080

                                                                            
Query: 192      agagtattgccttaggttatacttctggaacaacatctagcccaaagggcgtggttttgc 251
                ||||||||||||||||||||||||| || ||||| || | |||||||||||||||  |||
Sbjct: 10788079 agagtattgccttaggttatacttccgggacaacttccaacccaaagggcgtggtactgc 10788020

                                                                            
Query: 252      atcacaggggtgcttacctaatgtcactcagtggtgctcttgtatggaaaatgaacgacg 311
                |||||||||||||||||||||||||||| ||||||||||| ||||||  |||||| || |
Sbjct: 10788019 atcacaggggtgcttacctaatgtcactgagtggtgctctggtatggggaatgaatgaag 10787960

                                                                            
Query: 312      gcgcggtttacctgtggactttgccgatgttccactgcaacggctggtgctatacatgga 371
                |||| |||||  ||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 10787959 gcgctgtttatttgtggactttgccgatgttccactgtaatggctggtgctatacatgga 10787900

                                                           
Query: 372      cgcttgctgctatctgtggaacaagcatatgtcttcgtcaggt 414
                | ||||||||| | |||||||||||||| ||||||||||||||
Sbjct: 10787899 cacttgctgctctttgtggaacaagcatttgtcttcgtcaggt 10787857



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                      
Query: 320     tacctgtggactttgccgatgttccactgcaacggctgg 358
               |||||||||||| |||| |||||||||||||||||||||
Sbjct: 1867605 tacctgtggactgtgcccatgttccactgcaacggctgg 1867567



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 410      caggtcacagcgaaggctatcttctcagcgatagccaacca 450
                ||||| ||||| ||||| |||||||| ||||||||||||||
Sbjct: 10787021 caggttacagcaaaggccatcttctcggcgatagccaacca 10786981



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacgg 354
               |||| |||||||||||  |||| |||||||||||||||||
Sbjct: 1686663 cggtgtacctgtggacgctgcccatgttccactgcaacgg 1686702



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                            
Query: 320      tacctgtggactttgccgatgttccactgcaacggctggtgctatacatggacgcttgct 379
                |||||||||||| |||| |||||||| || || || ||||| || || ||| |  | |||
Sbjct: 10795393 tacctgtggactctgcccatgttccattgtaatggttggtgttacacttgggcaatggct 10795334

                                                   
Query: 380      gctatctgtggaacaagcatatgtcttcgtcaggt 414
                || || |||||||| | |||||||||||| |||||
Sbjct: 10795333 gcgatgtgtggaaccaacatatgtcttcgccaggt 10795299



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                              
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
               |||| ||||| |||||  |||| ||||||||||||||||| ||||||
Sbjct: 1863684 cggtgtacctctggaccgtgcccatgttccactgcaacgggtggtgc 1863638
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                               
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3862617 cggtgtacctgtggacgttgccgatgttccactgcaacggctggtgct 3862570



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                 
Query: 313     cgcggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||||| || ||||||||  ||||||||||||||||||||||||||||||
Sbjct: 2037162 cgcggtgtatctgtggacgctgccgatgttccactgcaacggctggtgct 2037113
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>gb|AY107917.1| Zea mays PCO071987 mRNA sequence
          Length = 1735

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                       
Query: 320 tacctgtggactttgccgatgttccactgcaacggctggtgctatacatggacgcttgct 379
           |||||||||||| |||| |||||||| ||||| || |||||||| || ||| |||| || 
Sbjct: 519 tacctgtggactctgcccatgttccattgcaatggttggtgctacacttgggcgctggca 578

                                              
Query: 380 gctatctgtggaacaagcatatgtcttcgtcaggt 414
           ||  |||| |||||||||||||||||||| |||||
Sbjct: 579 gcgttctgcggaacaagcatatgtcttcgccaggt 613



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 167 tggaaaccaccgcaggatgaatggaagagtattgccttaggttatacttctggaacaaca 226
           ||||| |||||| |||| || ||| |||| || ||| |||| || |||||||| || || 
Sbjct: 366 tggaagccaccgaaggacgagtggcagagcatcgccctaggctacacttctgggactact 425

                                                                   
Query: 227 tctagcccaaagggcgtggttttgcatcacaggggtgcttacctaatgtcactcag 282
           || |||||||||||||| || ||||||||| | |||||||| || ||| |||||||
Sbjct: 426 tccagcccaaagggcgtcgtgttgcatcaccgcggtgcttatctcatggcactcag 481
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                 
Query: 313     cgcggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||||| |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 2798967 cgcggtctacctgtggacgctgccgatgttccactgcaacggctggtgct 2799016
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                
Query: 313    cgcggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
              |||||| |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 981201 cgcggtctacctgtggacgctgccgatgttccactgcaacggctggtgct 981250
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                                 
Query: 313     cgcggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||||| |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1501186 cgcggtctacctgtggacgctgccgatgttccactgcaacggctggtgct 1501137
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                          
Query: 315    cggtttacctgtggactttgccgatgttccactgcaacggctggtgctatacatggacgc 374
              ||||||| ||||||||  ||||||||||||||||||||||||||||||   |||||||||
Sbjct: 252125 cggtttatctgtggacgctgccgatgttccactgcaacggctggtgcttcccatggacgc 252184

               
Query: 375    t 375
              |
Sbjct: 252185 t 252185
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgcta 363
               |||| ||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 4029287 cggtgtacctgtggacgttgccaatgttccactgcaacggctggtgcta 4029335



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                  
Query: 324     tgtggactttgccgatgttccactgcaacggctgg 358
               ||||||| |||||||||||||||||||||||||||
Sbjct: 3185043 tgtggaccttgccgatgttccactgcaacggctgg 3185077
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                               
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||| |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 2380426 cggtctacctgtggacgctgccgatgttccactgcaacggctggtgct 2380473
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                          
Query: 320     tacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1959867 tacctgtggacgctgccgatgttccactgcaacggctggtgct 1959825
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>gb|AF241171.1|AF241171 Pseudomonas aeruginosa pathogenicity island PAGI-1 gene, complete
             sequence
          Length = 51300

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                    
Query: 320   tacctgtggactttgccgatgttccactgcaacggctgg 358
             ||||||||||| |||||||||||||||||||||||||||
Sbjct: 12086 tacctgtggaccttgccgatgttccactgcaacggctgg 12124
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>gb|AE004836.1| Pseudomonas aeruginosa PAO1, section 397 of 529 of the complete
            genome
          Length = 11127

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315  cggtttacctgtggactttgccgatgttccactgcaacggctggtgctatacatggacg 373
            |||| ||||| |||||  |||||||||||||||||||||||||||||||| | ||||||
Sbjct: 4895 cggtgtacctctggaccctgccgatgttccactgcaacggctggtgctatccgtggacg 4953
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                 
Query: 313     cgcggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||||| |||||||||||  ||||||||||||| ||||||||||||||||
Sbjct: 2045069 cgcggtctacctgtggacgctgccgatgttccattgcaacggctggtgct 2045020
to top
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence
          Length = 634917

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 320    tacctgtggactttgccgatgttccactgcaacggctggtgctat 364
              ||||||||||| |||||| ||||||||||||| ||||||||||||
Sbjct: 252202 tacctgtggaccttgccgctgttccactgcaatggctggtgctat 252158



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 322    cctgtggactttgccgatgttccactgcaacggctggtgct 362
              |||||||||  ||||| ||||||||||||| ||||||||||
Sbjct: 616944 cctgtggacgctgccgctgttccactgcaatggctggtgct 616904
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgcta 363
               |||| |||||||||||  |||| ||||||||||||||||||||||||||
Sbjct: 2416734 cggtgtacctgtggaccctgccaatgttccactgcaacggctggtgcta 2416686
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                               
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||| |||||||||||  |||| |||||||||||||||||||||||||
Sbjct: 2819710 cggtctacctgtggacgctgcccatgttccactgcaacggctggtgct 2819757



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 323     ctgtggactttgccgatgttccactgcaacggctggtgct 362
               ||||||||  |||| |||||||||||||||||||||||||
Sbjct: 2679357 ctgtggaccctgcccatgttccactgcaacggctggtgct 2679318
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                           
Query: 317     gtttacctgtggactttgccgatgttccactgcaacggctggtg 360
               ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 1949648 gtttatctgtggaccttgccgatgttccactgcaacggttggtg 1949691
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                       
Query: 323     ctgtggactttgccgatgttccactgcaacggctggtgct 362
               ||||||||  ||||||||||||||||||||||||||||||
Sbjct: 3067289 ctgtggacgctgccgatgttccactgcaacggctggtgct 3067250
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                               
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
               |||| |||||||||||  |||| |||||||||||||||||||||||||
Sbjct: 1426330 cggtctacctgtggacgctgcccatgttccactgcaacggctggtgct 1426283
to top
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
             complete sequence
          Length = 138054

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 320   tacctgtggactttgccgatgttccactgcaacggctgg 358
             |||||||||||| |||| |||||||||||||||||||||
Sbjct: 92469 tacctgtggactgtgcccatgttccactgcaacggctgg 92431



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 315   cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
             |||| ||||| |||||  |||| ||||||||||||||||| ||||||
Sbjct: 88548 cggtgtacctctggaccgtgcccatgttccactgcaacgggtggtgc 88502
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>ref|NM_183955.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1794

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 315 cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
           |||| |||||||||||  |||||||||||||||||||||| ||||||
Sbjct: 728 cggtgtacctgtggaccgtgccgatgttccactgcaacgggtggtgc 774
to top
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
              complete sequence
          Length = 122218

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 320    tacctgtggactttgccgatgttccactgcaacggctgg 358
              |||||||||||| |||| |||||||||||||||||||||
Sbjct: 107804 tacctgtggactgtgcccatgttccactgcaacggctgg 107842



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 315    cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
              |||| ||||| |||||  |||| ||||||||||||||||| ||||||
Sbjct: 111725 cggtgtacctctggaccgtgcccatgttccactgcaacgggtggtgc 111771
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 315      cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
                |||| |||||||||||  |||||||||||||||||||||| ||||||
Sbjct: 13523575 cggtgtacctgtggaccgtgccgatgttccactgcaacgggtggtgc 13523621
to top
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1045F02
          Length = 215378

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 315   cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
             |||| |||||||||||  |||||||||||||||||||||| ||||||
Sbjct: 77535 cggtgtacctgtggaccgtgccgatgttccactgcaacgggtggtgc 77581
to top
>dbj|AK063921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B10, full
           insert sequence
          Length = 2024

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 315 cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
           |||| |||||||||||  |||||||||||||||||||||| ||||||
Sbjct: 799 cggtgtacctgtggaccgtgccgatgttccactgcaacgggtggtgc 845
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 313    cgcggtttacctgtggactttgccgatgttccactgcaacggctggtg 360
              |||||| || ||||||||  |||||||||| |||||||||||||||||
Sbjct: 707508 cgcggtctatctgtggacgctgccgatgtttcactgcaacggctggtg 707555
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 313    cgcggtttacctgtggactttgccgatgttccactgcaacggctggtg 360
              |||||||||||| ||||| || ||| | ||||||||||||||||||||
Sbjct: 283470 cgcggtttacctctggaccttaccgctcttccactgcaacggctggtg 283517
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 323     ctgtggactttgccgatgttccactgcaacggctggtgct 362
               ||||||||  |||||||||| |||||||||||||||||||
Sbjct: 3036767 ctgtggacgctgccgatgtttcactgcaacggctggtgct 3036728
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 323     ctgtggactttgccgatgttccactgcaacggctggtgct 362
               ||||||||  |||||||||| |||||||||||||||||||
Sbjct: 2938816 ctgtggacgctgccgatgtttcactgcaacggctggtgct 2938777
to top
>ref|XM_463896.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1967

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 315 cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
           |||| |||||||||||  |||| ||||||||||||||||| ||||||
Sbjct: 821 cggtgtacctgtggacggtgcccatgttccactgcaacgggtggtgc 867
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                              
Query: 315     cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
               |||| |||||||||||  |||| ||||||||||||||||| ||||||
Sbjct: 1015027 cggtgtacctgtggacggtgcccatgttccactgcaacgggtggtgc 1015073
to top
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBb0088N06
          Length = 123454

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 315  cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
            |||| |||||||||||  |||| ||||||||||||||||| ||||||
Sbjct: 3735 cggtgtacctgtggacggtgcccatgttccactgcaacgggtggtgc 3781
to top
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1217_F02
          Length = 118822

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 315   cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
             |||| |||||||||||  |||| ||||||||||||||||| ||||||
Sbjct: 86446 cggtgtacctgtggacggtgcccatgttccactgcaacgggtggtgc 86492
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                        
Query: 320    tacctgtggactttgccgatgttccactgcaacggctggtgc 361
              ||||||||||| |||||||||||||||||   ||||||||||
Sbjct: 569334 tacctgtggacgttgccgatgttccactgttccggctggtgc 569293
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 333     tgccgatgttccactgcaacggctggtgct 362
               ||||||||||||| ||||||||||||||||
Sbjct: 5000122 tgccgatgttccattgcaacggctggtgct 5000151
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 335     ccgatgttccactgcaacggctggtgctatacatggacgct 375
               ||||||||||||||||| |||||||||| | | ||||||||
Sbjct: 6029619 ccgatgttccactgcaatggctggtgctttccgtggacgct 6029659



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 333     tgccgatgttccactgcaacggctgg 358
               |||| |||||||||||||||||||||
Sbjct: 5734150 tgcccatgttccactgcaacggctgg 5734175
to top
>ref|XM_493818.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1737

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 315 cggtttacctgtggactttgccgatgttccactgcaacgg 354
           |||| |||||||||||  |||| |||||||||||||||||
Sbjct: 668 cggtgtacctgtggacgctgcccatgttccactgcaacgg 707
to top
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 335    ccgatgttccactgcaacggctgg 358
              ||||||||||||||||||||||||
Sbjct: 128547 ccgatgttccactgcaacggctgg 128524
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                              
Query: 315    cggtttacctgtggactttgccgatgttccactgcaacggctggtgct 362
              |||| |||||||||||  ||||| | ||||||||||| ||||||||||
Sbjct: 967001 cggtctacctgtggacgctgccgttattccactgcaatggctggtgct 966954
to top
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 323   ctgtggactttgccgatgttccactgcaacggctggtgct 362
             ||||||||  ||||||| |||||||||||||| |||||||
Sbjct: 12700 ctgtggacgctgccgatattccactgcaacggttggtgct 12661
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 335      ccgatgttccactgcaacggctgg 358
                ||||||||||||||||||||||||
Sbjct: 21782527 ccgatgttccactgcaacggctgg 21782504
to top
>dbj|AK110783.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-C04, full
           insert sequence
          Length = 1949

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 315 cggtttacctgtggactttgccgatgttccactgcaacgg 354
           |||| |||||||||||  |||| |||||||||||||||||
Sbjct: 796 cggtgtacctgtggacgctgcccatgttccactgcaacgg 835
to top
>dbj|AK070181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H21, full
           insert sequence
          Length = 1967

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 315 cggtttacctgtggactttgccgatgttccactgcaacgg 354
           |||| |||||||||||  |||| |||||||||||||||||
Sbjct: 821 cggtgtacctgtggacggtgcccatgttccactgcaacgg 860
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 335   ccgatgttccactgcaacggctgg 358
             ||||||||||||||||||||||||
Sbjct: 82845 ccgatgttccactgcaacggctgg 82822
to top
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 315   cggtttacctgtggactttgccgatgttccactgcaacgg 354
             |||| |||||||||||  |||| |||||||||||||||||
Sbjct: 99128 cggtgtacctgtggacgctgcccatgttccactgcaacgg 99167
to top
>gb|AY502075.1| Rhodococcus sp. DK17 plasmid pDK2, partial sequence
          Length = 37218

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 332   ttgccgatgttccactgcaacgg 354
             |||||||||||||||||||||||
Sbjct: 11000 ttgccgatgttccactgcaacgg 11022
to top
>gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 genomic sequence
          Length = 43887

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 326 tggactttgccgatgttccactgcaacggctggtg 360
           |||||| |||||||||| || ||||||||||||||
Sbjct: 949 tggactctgccgatgtttcattgcaacggctggtg 983
to top
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence
          Length = 210205

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 332    ttgccgatgttccactgcaacgg 354
              |||||||||||||||||||||||
Sbjct: 166879 ttgccgatgttccactgcaacgg 166857
to top
>dbj|AB107790.2| Rhodococcus sp. RHA1 bphB1, bphS, bphT for
            cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase, sensor
            kinase, response regulator, partial and complete cds
          Length = 8801

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 332  ttgccgatgttccactgcaacgg 354
            |||||||||||||||||||||||
Sbjct: 7681 ttgccgatgttccactgcaacgg 7659
to top
>dbj|AK101765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064F11, full
           insert sequence
          Length = 1929

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                       
Query: 320 tacctgtggactttgccgatgttccactgcaacggctggtgctatacatggacgcttgct 379
           |||||||||||| |||| |||||||| || || || ||||| || || ||| |  | |||
Sbjct: 839 tacctgtggactctgcccatgttccattgtaatggttggtgttacacttgggcaatggct 898

                                              
Query: 380 gctatctgtggaacaagcatatgtcttcgtcaggt 414
           || || |||||||| | |||||||||||| |||||
Sbjct: 899 gcgatgtgtggaaccaacatatgtcttcgccaggt 933
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>dbj|AK066406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060C21, full
           insert sequence
          Length = 1949

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 315 cggtttacctgtggactttgccgatgttccactgcaacggctggtgc 361
           |||| ||||| |||||  |||| ||||||||||||||||| ||||||
Sbjct: 756 cggtgtacctctggaccgtgcccatgttccactgcaacgggtggtgc 802
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>gb|AC093531.2| Homo sapiens chromosome 5 clone RP11-405L7, complete sequence
          Length = 163803

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 14   attatagcagatcaaaagaaatgtt 38
            |||||||||||| ||||||||||||
Sbjct: 5394 attatagcagataaaaagaaatgtt 5418
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>gb|AC093537.2| Homo sapiens chromosome 5 clone RP11-8L21, complete sequence
          Length = 169812

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 14    attatagcagatcaaaagaaatgtt 38
             |||||||||||| ||||||||||||
Sbjct: 28634 attatagcagataaaaagaaatgtt 28610
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>gb|AF098986.1| Caenorhabditis elegans cosmid C36C9, complete sequence
          Length = 36865

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 209  tatacttctggaacaacatct 229
            |||||||||||||||||||||
Sbjct: 6358 tatacttctggaacaacatct 6378
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>ref|NM_075907.1| Caenorhabditis elegans T BoX family member (tbx-31) (tbx-31) mRNA,
           complete cds
          Length = 2244

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 209 tatacttctggaacaacatct 229
           |||||||||||||||||||||
Sbjct: 638 tatacttctggaacaacatct 618
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>dbj|AP006370.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT03K19, TM0214,
            complete sequence
          Length = 95881

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 153  accctgaatttgcatggaaac 173
            |||||||||||||||||||||
Sbjct: 5491 accctgaatttgcatggaaac 5471
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 281     agtggtgctcttgtatggaa 300
               ||||||||||||||||||||
Sbjct: 2554100 agtggtgctcttgtatggaa 2554081
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>ref|NG_001336.2| Homo sapiens T cell receptor gamma locus (TRG@) on chromosome 7
          Length = 140728

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     ctttcaaaaagccacttgta 58
              ||||||||||||||||||||
Sbjct: 116745 ctttcaaaaagccacttgta 116726
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>gb|AC006033.2| Homo sapiens BAC clone RP11-121A8 from 7, complete sequence
          Length = 171816

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    ctttcaaaaagccacttgta 58
             ||||||||||||||||||||
Sbjct: 78102 ctttcaaaaagccacttgta 78121
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>gb|AC158904.4| Mus musculus chromosome 19, clone RP23-16C24, complete sequence
          Length = 219567

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     catacctgtgatccttcagc 93
              ||||||||||||||||||||
Sbjct: 138063 catacctgtgatccttcagc 138082
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>gb|AC125607.6| Homo sapiens 3 BAC RP11-294L13 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 30105

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   aatgttctttcaaaaagcca 52
            ||||||||||||||||||||
Sbjct: 9250 aatgttctttcaaaaagcca 9231
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>gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184796

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    aacaacatctagcccaaagg 239
              ||||||||||||||||||||
Sbjct: 152575 aacaacatctagcccaaagg 152556
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>gb|AC021760.9| Homo sapiens chromosome 8, clone RP11-433L7, complete sequence
          Length = 183059

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     cacgaggggattatagcagatcaa 28
             ||||||| ||||||||||||||||
Sbjct: 70655 cacgaggagattatagcagatcaa 70678
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>gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complete sequence
          Length = 178378

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    aagaaatgttctttcaaaaa 48
             ||||||||||||||||||||
Sbjct: 25740 aagaaatgttctttcaaaaa 25759
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>gb|AF159056.1|AF159056 Homo sapiens T-cell gamma receptor locus, complete sequence
          Length = 140691

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     ctttcaaaaagccacttgta 58
              ||||||||||||||||||||
Sbjct: 116712 ctttcaaaaagccacttgta 116693
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>gb|AC037433.6|AC037433 Homo sapiens chromosome 15, clone RP11-92C13, complete sequence
          Length = 164500

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     aaagaaatgttctttcaaaa 47
              ||||||||||||||||||||
Sbjct: 139385 aaagaaatgttctttcaaaa 139366
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>gb|AC023732.5| Drosophila melanogaster X BAC RP98-42M11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177820

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    aacaacatctagcccaaagg 239
              ||||||||||||||||||||
Sbjct: 152184 aacaacatctagcccaaagg 152203
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>gb|AC156989.3| Mus musculus chromosome 1, clone RP23-379L2, complete sequence
          Length = 188691

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    ctgtggaacaagcatatgtc 404
              ||||||||||||||||||||
Sbjct: 157955 ctgtggaacaagcatatgtc 157936
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>emb|AL670943.14| Mouse DNA sequence from clone RP23-233G6 on chromosome X, complete
              sequence
          Length = 197148

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    tcactcagtggtgctcttgt 294
              ||||||||||||||||||||
Sbjct: 190823 tcactcagtggtgctcttgt 190842
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>gb|AC119176.10| Mus musculus chromosome 1, clone RP24-359F24, complete sequence
          Length = 208009

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   ctgtggaacaagcatatgtc 404
             ||||||||||||||||||||
Sbjct: 52847 ctgtggaacaagcatatgtc 52828
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>gb|AC009399.5|AC009399 Homo sapiens chromosome 14 clone RP11-368K8 containing KIAA0998 gene,
              partial cds, complete sequence
          Length = 185964

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    agaagttcttggaaactggc 151
              ||||||||||||||||||||
Sbjct: 173862 agaagttcttggaaactggc 173881
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>gb|AF107885.2|DJ270M14 Homo sapiens chromosome 14q24.3 clone BAC270M14 transforming growth
             factor-beta 3 (TGF-beta 3) gene, complete cds; and unknown
             genes
          Length = 192126

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   agaagttcttggaaactggc 151
             ||||||||||||||||||||
Sbjct: 30798 agaagttcttggaaactggc 30817
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>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete
             sequence
          Length = 307201

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   aacaacatctagcccaaagg 239
             ||||||||||||||||||||
Sbjct: 70461 aacaacatctagcccaaagg 70480
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>gb|AC102548.11| Mus musculus chromosome 19, clone RP23-135H14, complete sequence
          Length = 227173

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     catacctgtgatccttcagc 93
              ||||||||||||||||||||
Sbjct: 158462 catacctgtgatccttcagc 158443


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,588,582
Number of Sequences: 3902068
Number of extensions: 3588582
Number of successful extensions: 65305
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 64807
Number of HSP's gapped (non-prelim): 495
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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