ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal11n05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 208 bits (105), Expect = 1e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 32 gatccgatgggggctgtggtgaccgctgtgatcgcgatcgcggcggtggtgctgggctgg 91 |||| ||||||||| |||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 2914518 gatcggatgggggcggtggtgacggcggtgatagccatcgcggcggtggtgctgggctgg 2914577 Query: 92 atcaccatcgagatggcctgcaagccctgcctcgagaccggccgccgcgccatggaccgt 151 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2914578 atcaccatcgagatggcctgcaagccctgcctcgactccggccgccgcgccatggaccgc 2914637 Query: 152 gccctcgaccccaactacgatcctgacga 180 |||||||||||||||||||| || ||||| Sbjct: 2914638 gccctcgaccccaactacgaccccgacga 2914666 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 238 cgacctctccgcctccgccgccgc 261 |||||||||||||||||||||||| Sbjct: 4107956 cgacctctccgcctccgccgccgc 4107933 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 246 ccgcctccgccgccgcgccagccaaggccatctgat 281 |||||||||||||||||| |||||| ||||||||| Sbjct: 2914720 ccgcctccgccgccgcgctggccaagaccatctgat 2914755 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cgccgacctctccgcctccgccgcc 259 |||||||||||||| |||||||||| Sbjct: 29189130 cgccgacctctccgtctccgccgcc 29189154 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 27895404 ctccgcctccgccgccgcgc 27895423
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 208 bits (105), Expect = 1e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 32 gatccgatgggggctgtggtgaccgctgtgatcgcgatcgcggcggtggtgctgggctgg 91 |||| ||||||||| |||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 84805 gatcggatgggggcggtggtgacggcggtgatagccatcgcggcggtggtgctgggctgg 84864 Query: 92 atcaccatcgagatggcctgcaagccctgcctcgagaccggccgccgcgccatggaccgt 151 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 84865 atcaccatcgagatggcctgcaagccctgcctcgactccggccgccgcgccatggaccgc 84924 Query: 152 gccctcgaccccaactacgatcctgacga 180 |||||||||||||||||||| || ||||| Sbjct: 84925 gccctcgaccccaactacgaccccgacga 84953 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 246 ccgcctccgccgccgcgccagccaaggccatctgat 281 |||||||||||||||||| |||||| ||||||||| Sbjct: 85007 ccgcctccgccgccgcgctggccaagaccatctgat 85042
>dbj|AK122093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124K14, full insert sequence Length = 504 Score = 208 bits (105), Expect = 1e-50 Identities = 138/149 (92%) Strand = Plus / Plus Query: 32 gatccgatgggggctgtggtgaccgctgtgatcgcgatcgcggcggtggtgctgggctgg 91 |||| ||||||||| |||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 96 gatcggatgggggcggtggtgacggcggtgatagccatcgcggcggtggtgctgggctgg 155 Query: 92 atcaccatcgagatggcctgcaagccctgcctcgagaccggccgccgcgccatggaccgt 151 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 156 atcaccatcgagatggcctgcaagccctgcctcgactccggccgccgcgccatggaccgc 215 Query: 152 gccctcgaccccaactacgatcctgacga 180 |||||||||||||||||||| || ||||| Sbjct: 216 gccctcgaccccaactacgaccccgacga 244 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 246 ccgcctccgccgccgcgccagccaaggccatctgat 281 |||||||||||||||||| |||||| ||||||||| Sbjct: 298 ccgcctccgccgccgcgctggccaagaccatctgat 333
>dbj|AK105386.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-H02, full insert sequence Length = 583 Score = 200 bits (101), Expect = 3e-48 Identities = 137/149 (91%) Strand = Plus / Plus Query: 32 gatccgatgggggctgtggtgaccgctgtgatcgcgatcgcggcggtggtgctgggctgg 91 |||| ||||||||| |||||||| || ||||| || |||||||||||||||||||||||| Sbjct: 100 gatcggatgggggcggtggtgacggcggtgatagccatcgcggcggtggtgctgggctgg 159 Query: 92 atcaccatcgagatggcctgcaagccctgcctcgagaccggccgccgcgccatggaccgt 151 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 160 atcaccatcgagatggcctacaagccctgcctcgactccggccgccgcgccatggaccgc 219 Query: 152 gccctcgaccccaactacgatcctgacga 180 |||||||||||||||||||| || ||||| Sbjct: 220 gccctcgaccccaactacgaccccgacga 248 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 246 ccgcctccgccgccgcgccagccaaggccatctgat 281 |||||||||||||||||| |||||| ||||||||| Sbjct: 302 ccgcctccgccgccgcgctggccaagaccatctgat 337
>gb|AY105315.1| Zea mays PCO128127 mRNA sequence Length = 547 Score = 190 bits (96), Expect = 2e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 36 cgatgggggctgtggtgaccgctgtgatcgcgatcgcggcggtggtgctgggctggatca 95 |||||||||| |||||||| || |||||||||||||| ||||||||||| |||||||||| Sbjct: 115 cgatgggggcggtggtgacggcggtgatcgcgatcgccgcggtggtgctcggctggatca 174 Query: 96 ccatcgagatggcctgcaagccctgcctcgagaccggccgccgcgccatggaccgtgccc 155 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 175 ccatcgagatggcatgcaagccctgcctcgagaccggccgacgcgccatggaccgcgcgc 234 Query: 156 tcgaccccaactacga 171 ||||||||||| |||| Sbjct: 235 tcgaccccaaccacga 250 Score = 46.1 bits (23), Expect = 0.091 Identities = 41/47 (87%) Strand = Plus / Plus Query: 234 tcgccgacctctccgcctccgccgccgcgccagccaaggccatctga 280 |||||||||||||||||||| |||| | || || |||||||||||| Sbjct: 301 tcgccgacctctccgcctccaccgcgccacccgcaaaggccatctga 347
>ref|XM_475387.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||||||||| ||||| ||||||||| Sbjct: 559 cgccgtcgccgacctcgccgccgccgccgccg 528
>ref|XM_476829.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 238 cgacctctccgcctccgccgccgc 261 |||||||||||||||||||||||| Sbjct: 267 cgacctctccgcctccgccgccgc 290
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||||||||| ||||| ||||||||| Sbjct: 64337 cgccgtcgccgacctcgccgccgccgccgccg 64368
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||||||||| ||||| ||||||||| Sbjct: 18695 cgccgtcgccgacctcgccgccgccgccgccg 18726
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||||||||| ||||| ||||||||| Sbjct: 22709138 cgccgtcgccgacctcgccgccgccgccgccg 22709169 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccgcgccagcca 269 |||||||||||||||| ||||||| |||| Sbjct: 1644580 cctctccgcctccgcctccgcgcccgcca 1644608
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 238 cgacctctccgcctccgccgccgc 261 |||||||||||||||||||||||| Sbjct: 100814 cgacctctccgcctccgccgccgc 100791
>dbj|AK070343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052E24, full insert sequence Length = 1097 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||||||||| ||||| ||||||||| Sbjct: 674 cgccgtcgccgacctcgccgccgccgccgccg 643
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 tcgccgacctctccgcctccgccgcc 259 |||||||||||||||| ||||||||| Sbjct: 1562963 tcgccgacctctccgcttccgccgcc 1562988
>ref|NM_015710.3| Homo sapiens glioma tumor suppressor candidate region gene 2 (GLTSCR2), mRNA Length = 1567 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1182 ccgcctccgccgccgcgccagc 1161
>gb|AY535000.1| Homo sapiens preS1 binding protein mRNA, complete cds Length = 1437 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1173 ccgcctccgccgccgcgccagc 1152
>gb|BC014009.2| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone IMAGE:4039964), partial cds Length = 1525 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1167 ccgcctccgccgccgcgccagc 1146
>gb|BC013235.1| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone IMAGE:4154770) Length = 1499 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1168 ccgcctccgccgccgcgccagc 1147
>gb|BC021558.1| Homo sapiens cDNA clone IMAGE:5015020, **** WARNING: chimeric clone **** Length = 1874 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1522 ccgcctccgccgccgcgccagc 1501
>gb|BC013307.1| Homo sapiens, glioma tumor suppressor candidate region gene 2, clone IMAGE:2988686, mRNA Length = 1514 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1170 ccgcctccgccgccgcgccagc 1149
>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24 Length = 314450 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 tgggggctgtggtgaccgctgtgatc 64 |||||||| ||||||||||||||||| Sbjct: 131812 tgggggctttggtgaccgctgtgatc 131787
>gb|BC010095.2| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone MGC:19683 IMAGE:3501649), complete cds Length = 1601 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1216 ccgcctccgccgccgcgccagc 1195
>emb|AL122063.1|HSM801207 Homo sapiens mRNA; cDNA DKFZp434C031 (from clone DKFZp434C031) Length = 1762 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 524 ccgcctccgccgccgcgccagc 503
>gb|BC007248.1|BC007248 Homo sapiens, glioma tumor suppressor candidate region gene 2, clone IMAGE:2966906, mRNA, partial cds Length = 1530 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1161 ccgcctccgccgccgcgccagc 1140
>gb|AF182076.1|AF182076 Homo sapiens glioma tumor suppressor candidate region protein 2 (GLTSCR2) mRNA, complete cds Length = 1516 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1180 ccgcctccgccgccgcgccagc 1159
>dbj|AK024486.1| Homo sapiens mRNA for FLJ00085 protein, partial cds Length = 4186 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 3165 ccgcctccgccgccgcgccagc 3144
>gb|BC039869.1| Homo sapiens, Similar to glioma tumor suppressor candidate region gene 2, clone IMAGE:4179633, mRNA Length = 1500 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1169 ccgcctccgccgccgcgccagc 1148
>gb|BC006311.2| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone MGC:12572 IMAGE:4111480), complete cds Length = 1510 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1179 ccgcctccgccgccgcgccagc 1158
>emb|AL359336.1|IR2073509 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2073509 Length = 1476 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1140 ccgcctccgccgccgcgccagc 1119
>gb|BC013203.1| Homo sapiens glioma tumor suppressor candidate region gene 2, mRNA (cDNA clone IMAGE:4178912) Length = 1525 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccagc 267 |||||||||||||||||||||| Sbjct: 1185 ccgcctccgccgccgcgccagc 1164
>ref|XM_468549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 974 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 acctctccgcctccgccgccg 260 ||||||||||||||||||||| Sbjct: 105 acctctccgcctccgccgccg 125
>ref|XM_527245.1| PREDICTED: Pan troglodytes similar to PWWP domain containing 1; HDGF (hepatoma-derived growth factor) like (LOC471867), mRNA Length = 885 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 228 tcgccgtcgccgacctctccgcctccgcc 256 |||||| ||||| |||||||||||||||| Sbjct: 679 tcgccgccgccgccctctccgcctccgcc 651
>ref|XM_469558.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2094 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 108 cctctccgcctccgccgccgc 88
>ref|NM_185512.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1420 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cgccgacctctccgcctccgccgcc 259 |||||||||||||| |||||||||| Sbjct: 544 cgccgacctctccgtctccgccgcc 568
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 gccgacctctccgcctccgcc 256 ||||||||||||||||||||| Sbjct: 1287934 gccgacctctccgcctccgcc 1287914
>gb|AY728231.1| Hemidactylium scutatum mitochondrion, complete genome Length = 17421 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 ttccctttcatccttacttca 345 ||||||||||||||||||||| Sbjct: 14652 ttccctttcatccttacttca 14672
>gb|AY702091.1| Nonomuraea sp. ATCC 39727 atp operon, complete sequence Length = 7760 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 ctctccgcctccgccgccgcg 262 ||||||||||||||||||||| Sbjct: 2786 ctctccgcctccgccgccgcg 2766
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccgcgccagcca 269 |||||||||||||||| ||||||| |||| Sbjct: 96740 cctctccgcctccgcctccgcgcccgcca 96768
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 28696807 cctctccgcctccgccgccgc 28696827 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 10803444 cctctccgcctccgccgccgc 10803464 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tctccgcctccgccgccgcg 262 |||||||||||||||||||| Sbjct: 34962837 tctccgcctccgccgccgcg 34962856 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 4231275 ctccgcctccgccgccgcgc 4231294
>gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic sequence, complete sequence Length = 58734 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 5276 ctccgcctccgccgccgcgcc 5256
>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08, from chromosome 3, complete sequence Length = 108833 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 51443 cctctccgcctccgccgccgc 51423
>emb|AJ238116.1|OSA238116 Oryza sativa mRNA for putative phospholipase A2, isoform I Length = 804 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 acctctccgcctccgccgccg 260 ||||||||||||||||||||| Sbjct: 94 acctctccgcctccgccgccg 114
>gb|AY298999.1|AY298997S3 Gallus gallus chromosome Z chromo-helicase-DNA binding 1 gene, intron 9 Length = 512 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 tgtttggttcttttggctttg 400 ||||||||||||||||||||| Sbjct: 275 tgtttggttcttttggctttg 255
>gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16 genomic sequence, complete sequence Length = 129585 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 27890 ctccgcctccgccgccgcgcc 27910
>gb|AF161389.1|AF161389 Homo sapiens HSPC271 mRNA, partial cds Length = 614 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgccag 266 ||||||||||||||||||||| Sbjct: 263 ccgcctccgccgccgcgccag 243
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 949490 ctccgcctccgccgccgcgcc 949470
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 18033143 ctccgcctccgccgccgcgcc 18033123 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 ccgacctctccgcctccgccgccgcgcc 264 |||||||||||||| |||||||| |||| Sbjct: 19200450 ccgacctctccgccgccgccgcctcgcc 19200477 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 2720780 ctccgcctccgccgccgcgc 2720799 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgcca 265 |||||||||||||||||||| Sbjct: 1838059 ccgcctccgccgccgcgcca 1838040
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 28788131 cctctccgcctccgccgccgc 28788151 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 10801545 cctctccgcctccgccgccgc 10801565 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tctccgcctccgccgccgcg 262 |||||||||||||||||||| Sbjct: 35052909 tctccgcctccgccgccgcg 35052928 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 4231384 ctccgcctccgccgccgcgc 4231403
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 acctctccgcctccgccgccg 260 ||||||||||||||||||||| Sbjct: 35790513 acctctccgcctccgccgccg 35790493 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccg 260 |||||||||||||||||||| Sbjct: 32841517 cctctccgcctccgccgccg 32841536 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||| ||||||||||| || |||||| Sbjct: 30787770 cgccgtcgcccacctctccgccgcctccgccg 30787801 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 22200319 ctccgcctccgccgccgcgc 22200338 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agaccggccgccgcgccatg 145 |||||||||||||||||||| Sbjct: 18477494 agaccggccgccgcgccatg 18477513
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 4890575 ctccgcctccgccgccgcgcc 4890595
>gb|AY691752.1| Hemidactylium scutatum voucher PC 2000_1 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 783 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 ttccctttcatccttacttca 345 ||||||||||||||||||||| Sbjct: 635 ttccctttcatccttacttca 655
>gb|AY691751.1| Hemidactylium scutatum voucher UTA 56604 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 783 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 ttccctttcatccttacttca 345 ||||||||||||||||||||| Sbjct: 635 ttccctttcatccttacttca 655
>gb|AC091532.13| Oryza sativa chromosome 3 BAC OSJNBa0078A17 genomic sequence, complete sequence Length = 147344 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 3788 cctctccgcctccgccgccgc 3808
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 2089 cctctccgcctccgccgccgc 2069
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 tcgcgatcgcggcggtggtgc 83 ||||||||||||||||||||| Sbjct: 1203974 tcgcgatcgcggcggtggtgc 1203994
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cgccgacctctccgcctccgccgcc 259 |||||||||||||| |||||||||| Sbjct: 29204 cgccgacctctccgtctccgccgcc 29228
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 135224 ctccgcctccgccgccgcgcc 135244
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccgcctccgccg 257 ||||| |||||||||||| |||||||||| Sbjct: 3978321 cgccggcgccgacctctcagcctccgccg 3978349
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cgccgacctctccgcctccgccgcc 259 |||||||||||||| |||||||||| Sbjct: 124248 cgccgacctctccgtctccgccgcc 124272
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 acctctccgcctccgccgccg 260 ||||||||||||||||||||| Sbjct: 61228 acctctccgcctccgccgccg 61208
>dbj|AK108450.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-C08, full insert sequence Length = 1083 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccgc 261 ||||||||||||||||||||| Sbjct: 686 cctctccgcctccgccgccgc 666
>dbj|AK108410.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-H01, full insert sequence Length = 973 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 acctctccgcctccgccgccg 260 ||||||||||||||||||||| Sbjct: 105 acctctccgcctccgccgccg 125
>dbj|AK103455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129J22, full insert sequence Length = 1421 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cgccgacctctccgcctccgccgcc 259 |||||||||||||| |||||||||| Sbjct: 545 cgccgacctctccgtctccgccgcc 569
>dbj|AK101865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070C14, full insert sequence Length = 1718 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 130 ctccgcctccgccgccgcgcc 110
>dbj|AK101856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O10, full insert sequence Length = 2012 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 60 ctccgcctccgccgccgcgcc 80
>dbj|AK071930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N24, full insert sequence Length = 1991 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 54 ctccgcctccgccgccgcgcc 74
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 cgcgatcgcggcggtggtgctgggc 88 ||||||||| ||||||||||||||| Sbjct: 3294459 cgcgatcgccgcggtggtgctgggc 3294435
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 18042396 ctccgcctccgccgccgcgcc 18042376 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 ccgacctctccgcctccgccgccgcgcc 264 |||||||||||||| |||||||| |||| Sbjct: 19211726 ccgacctctccgccgccgccgcctcgcc 19211753 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 2720731 ctccgcctccgccgccgcgc 2720750 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgcca 265 |||||||||||||||||||| Sbjct: 1838010 ccgcctccgccgccgcgcca 1837991
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 949490 ctccgcctccgccgccgcgcc 949470
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgcc 264 ||||||||||||||||||||| Sbjct: 87075 ctccgcctccgccgccgcgcc 87055
>gb|AE010315.1| Methanopyrus kandleri AV19 section 14 of 157 of the complete genome Length = 13428 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gatcgcggcggtggtgctgg 86 |||||||||||||||||||| Sbjct: 11565 gatcgcggcggtggtgctgg 11546
>ref|XM_512788.1| PREDICTED: Pan troglodytes LOC456171 (LOC456171), mRNA Length = 2139 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcctccgccgccgcgccagc 267 |||||||||||||||||||| Sbjct: 1822 gcctccgccgccgcgccagc 1803
>ref|NM_194832.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0030B02.6), mRNA Length = 1197 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 24 ctccgcctccgccgccgcgc 5
>ref|XM_468065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1320 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccg 260 |||||||||||||||||||| Sbjct: 726 cctctccgcctccgccgccg 707
>ref|XM_466404.1| Oryza sativa (japonica cultivar-group), mRNA Length = 849 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 94 ctccgcctccgccgccgcgc 75
>ref|XM_465945.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 agaccggccgccgcgccatg 145 |||||||||||||||||||| Sbjct: 722 agaccggccgccgcgccatg 703
>ref|NM_197315.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0055O03.4), mRNA Length = 921 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 237 ccgacctctccgcctccgccgccgcgcc 264 |||||||||||||| |||||||| |||| Sbjct: 367 ccgacctctccgccgccgccgcctcgcc 340
>ref|XM_470365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tctccgcctccgccgccgcg 262 |||||||||||||||||||| Sbjct: 455 tctccgcctccgccgccgcg 474
>ref|XM_470545.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 558 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 510 ctccgcctccgccgccgcgc 529
>ref|NM_186040.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1679 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 56 ctccgcctccgccgccgcgc 75
>gb|AC005531.2| Homo sapiens PAC clone RP4-701O16 from 7, complete sequence Length = 161910 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cctccgccgccgcgccagcc 268 |||||||||||||||||||| Sbjct: 130416 cctccgccgccgcgccagcc 130435
>gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03 genomic sequence, complete sequence Length = 82909 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 237 ccgacctctccgcctccgccgccgcgcc 264 |||||||||||||| |||||||| |||| Sbjct: 52794 ccgacctctccgccgccgccgcctcgcc 52821
>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete sequence Length = 205369 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccgcgcc 264 |||| ||||||||||||||||||| Sbjct: 30719 cctcgccgcctccgccgccgcgcc 30696
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccg 248 |||||||||||||||||||| Sbjct: 156275 cgccgtcgccgacctctccg 156294
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cgccgtcgccgacctctccg 248 |||||||||||||||||||| Sbjct: 53823 cgccgtcgccgacctctccg 53804
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgcca 265 |||||||||||||||||||| Sbjct: 1838059 ccgcctccgccgccgcgcca 1838040
>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0072F04, complete sequence Length = 137724 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgcca 265 |||||||||||||||||||| Sbjct: 56512 ccgcctccgccgccgcgcca 56493
>gb|AC012322.8| Homo sapiens chromosome 16 clone RP11-562N11, complete sequence Length = 186151 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggcttccctttcatcctta 340 |||||||||||||||||||| Sbjct: 125299 aggcttccctttcatcctta 125318
>gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0072F04, complete sequence Length = 133121 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ccgcctccgccgccgcgcca 265 |||||||||||||||||||| Sbjct: 89633 ccgcctccgccgccgcgcca 89614
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gtgatcgcgatcgcggcggtggtg 82 |||||||||||||||| ||||||| Sbjct: 1479607 gtgatcgcgatcgcggtggtggtg 1479584
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cgcgatcgcggcggtggtgc 83 |||||||||||||||||||| Sbjct: 2159501 cgcgatcgcggcggtggtgc 2159520 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cgccgccgcgccagccaagg 272 |||||||||||||||||||| Sbjct: 89469 cgccgccgcgccagccaagg 89488
>gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, complete sequence Length = 131548 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 gcctccgccgccgcgccagc 267 |||||||||||||||||||| Sbjct: 45672 gcctccgccgccgcgccagc 45653
>dbj|AK140132.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230310E12 product:Hypothetical protein (Microtubule-associated protein GLFND) homolog [Homo sapiens], full insert sequence Length = 1782 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccgcgcc 264 |||| ||||||||||||||||||| Sbjct: 55 cctcgccgcctccgccgccgcgcc 32
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 47556 ctccgcctccgccgccgcgc 47575
>emb|BX664625.12| Zebrafish DNA sequence from clone DKEY-286J17 in linkage group 22, complete sequence Length = 142350 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ttggttcttttggctttggt 402 |||||||||||||||||||| Sbjct: 105548 ttggttcttttggctttggt 105567
>gb|AC009109.9| Homo sapiens chromosome 16 clone RP11-467L24, complete sequence Length = 150086 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggcttccctttcatcctta 340 |||||||||||||||||||| Sbjct: 45282 aggcttccctttcatcctta 45301
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccg 248 |||||||||||||||||||| Sbjct: 24355166 cgccgtcgccgacctctccg 24355185
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||| ||||||||||| || |||||| Sbjct: 2398929 cgccgtcgcctacctctccgccgcctccgccg 2398960
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccg 260 |||||||||||||||||||| Sbjct: 23176278 cctctccgcctccgccgccg 23176259 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ctctccgcctccgccgccgc 261 |||||||||||||||||||| Sbjct: 6158129 ctctccgcctccgccgccgc 6158148
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tctccgcctccgccgccgcg 262 |||||||||||||||||||| Sbjct: 52643 tctccgcctccgccgccgcg 52624
>gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, complete sequence Length = 162101 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcctccgccgccgcgccagc 267 |||||||||||||||||||| Sbjct: 85881 gcctccgccgccgcgccagc 85900
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 131912 ctccgcctccgccgccgcgc 131931
>gb|AF399962.1| Austinograea sp. VG-2002 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 395 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 cttccctttcatccttactt 343 |||||||||||||||||||| Sbjct: 155 cttccctttcatccttactt 136
>gb|AF399961.1| Austinograea sp. VG-2002 cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 398 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 cttccctttcatccttactt 343 |||||||||||||||||||| Sbjct: 167 cttccctttcatccttactt 148
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 58762 ctccgcctccgccgccgcgc 58781
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||| ||||||||||| || |||||| Sbjct: 77339 cgccgtcgcctacctctccgccgcctccgccg 77370
>dbj|AP005538.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0013K01 Length = 139464 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cctctccgcctccgccgccg 260 |||||||||||||||||||| Sbjct: 99535 cctctccgcctccgccgccg 99554
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccgcctccgccgccg 260 |||||||||| ||||||||||| || |||||| Sbjct: 127917 cgccgtcgcccacctctccgccgcctccgccg 127948
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gatcgcggcggtggtgctgg 86 |||||||||||||||||||| Sbjct: 6458979 gatcgcggcggtggtgctgg 6458998
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 tcgccgtcgccgacctctccgcct 251 ||||||||||||||||| |||||| Sbjct: 4639289 tcgccgtcgccgacctcaccgcct 4639266
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 ctctccgcctccgccgccgc 261 |||||||||||||||||||| Sbjct: 71948 ctctccgcctccgccgccgc 71967
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 96163 ctccgcctccgccgccgcgc 96182
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccg 260 |||||||||||||||||||| Sbjct: 126926 cctctccgcctccgccgccg 126907
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccg 260 |||||||||||||||||||| Sbjct: 11040 cctctccgcctccgccgccg 11021
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agaccggccgccgcgccatg 145 |||||||||||||||||||| Sbjct: 18633 agaccggccgccgcgccatg 18652
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 agaccggccgccgcgccatg 145 |||||||||||||||||||| Sbjct: 140418 agaccggccgccgcgccatg 140437
>dbj|AK120087.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020K01, full insert sequence Length = 938 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 715 ctccgcctccgccgccgcgc 734
>dbj|AK106855.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B07, full insert sequence Length = 1679 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 56 ctccgcctccgccgccgcgc 75
>emb|AJ332875.1|HSA332875 Homo sapiens genomic sequence surrounding NotI site, clone NL6-DH17R Length = 658 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 ctctccgcctccgccgccgc 261 |||||||||||||||||||| Sbjct: 20 ctctccgcctccgccgccgc 1
>dbj|AK073677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050I02, full insert sequence Length = 1699 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 96 ctccgcctccgccgccgcgc 77
>dbj|AK070503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054J12, full insert sequence Length = 1420 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 40 ctccgcctccgccgccgcgc 21
>dbj|AK067971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123K19, full insert sequence Length = 842 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 623 ctccgcctccgccgccgcgc 642
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gatcgcggcggtggtgctgg 86 |||||||||||||||||||| Sbjct: 5207920 gatcgcggcggtggtgctgg 5207939
>dbj|AK065544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030K22, full insert sequence Length = 1388 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 cctctccgcctccgccgccg 260 |||||||||||||||||||| Sbjct: 226 cctctccgcctccgccgccg 207
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cgccgtcgccgacctctccg 248 |||||||||||||||||||| Sbjct: 24666835 cgccgtcgccgacctctccg 24666854
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ctccgcctccgccgccgcgc 263 |||||||||||||||||||| Sbjct: 59890 ctccgcctccgccgccgcgc 59909
>emb|AL513143.3|CNS07EFO Human chromosome 14 DNA sequence BAC R-611H21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155584 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gtttggttcttttggctttg 400 |||||||||||||||||||| Sbjct: 105608 gtttggttcttttggctttg 105627
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cgcgatcgcggcggtggtgc 83 |||||||||||||||||||| Sbjct: 2157531 cgcgatcgcggcggtggtgc 2157512 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cgccgccgcgccagccaagg 272 |||||||||||||||||||| Sbjct: 1688498 cgccgccgcgccagccaagg 1688517
>emb|AL157690.7|CNS01RG2 Human chromosome 14 DNA sequence BAC R-565E24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163398 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gtttggttcttttggctttg 400 |||||||||||||||||||| Sbjct: 15151 gtttggttcttttggctttg 15132 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,260,999 Number of Sequences: 3902068 Number of extensions: 4260999 Number of successful extensions: 102186 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97357 Number of HSP's gapped (non-prelim): 4829 length of query: 419 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 397 effective length of database: 17,147,199,772 effective search space: 6807438309484 effective search space used: 6807438309484 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
