Clone Information

BLAST Search Result

Clone Name	baal12c02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	YM3M_CAEEL (P91343) Hypothetical WD-repeat protein F55F8.5	37	0.037
2	L2DTL_DROME (Q24371) Protein lethal(2)denticleless (Protein DTL83)	36	0.063
3	APAF_RAT (Q9EPV5) Apoptotic protease-activating factor 1 (Apaf-1)	35	0.11
4	APAF_MOUSE (O88879) Apoptotic protease-activating factor 1 (Apaf-1)	34	0.18
5	ERCC8_BOVIN (Q5BIM8) DNA excision repair protein ERCC-8	33	0.31
6	ERCC8_HUMAN (Q13216) DNA excision repair protein ERCC-8 (Cockayn...	33	0.31
7	WD42_DICDI (P54686) WD-repeat protein 2	33	0.31
8	STRN_SORMA (Q70M86) Striatin Pro11	33	0.41
9	TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (...	33	0.53
10	Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163	33	0.53
11	BCN1_ARATH (Q9M367) Beclin-1-like protein	32	0.70
12	VE2_HPV04 (Q07849) Regulatory protein E2	32	0.91
13	Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124	32	1.2
14	RL3_SYNY3 (P73320) 50S ribosomal protein L3	32	1.2
15	ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayn...	31	1.6
16	TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)	31	1.6
17	WDR57_PONPY (Q5RF51) WD-repeat protein 57	31	1.6
18	WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein)...	31	1.6
19	TLE2_MOUSE (Q9WVB2) Transducin-like enhancer protein 2	31	1.6
20	WDR57_MOUSE (Q6PE01) WD-repeat protein 57	31	1.6
21	TAF5_DROME (P49846) Transcription initiation factor TFIID subuni...	31	2.0
22	ICP4_GAHVG (Q02362) Trans-acting transcriptional activator prote...	31	2.0
23	UNC37_CAEEL (O02482) Transcription factor unc-37 (Uncoordinated ...	30	2.7
24	YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4	30	2.7
25	TLE1_XENLA (O42469) Enhancer of split groucho-like protein 1	30	3.5
26	TLE2_BRARE (O13166) Groucho 2 protein	30	3.5
27	UCP4_HUMAN (O95847) Mitochondrial uncoupling protein 4 (UCP 4) (...	30	3.5
28	AAC3_DICDI (P14197) AAC-rich mRNA clone AAC3 protein (Fragment)	30	3.5
29	TLE4_MOUSE (Q62441) Transducin-like enhancer protein 4 (Groucho-...	30	4.5
30	TLE4_HUMAN (Q04727) Transducin-like enhancer protein 4	30	4.5
31	TLE3_RAT (Q9JIT3) Transducin-like enhancer protein 3 (rTLE3)	30	4.5
32	TLE1_BRARE (O13168) Groucho 1 protein (Fragment)	30	4.5
33	TLE1_MOUSE (Q62440) Transducin-like enhancer protein 1 (Groucho-...	30	4.5
34	TLE1_HUMAN (Q04724) Transducin-like enhancer protein 1 (ESG1) (E...	30	4.5
35	TLE2_XENLA (O42478) Enhancer of split groucho-like protein 2 (Fr...	30	4.5
36	SYM_AERPE (Q9YCY3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Meth...	30	4.5
37	TLE3_HUMAN (Q04726) Transducin-like enhancer protein 3 (ESG3)	30	4.5
38	TLE3_MOUSE (Q08122) Transducin-like enhancer protein 3 (ESG) (Gr...	30	4.5
39	PLD2_MOUSE (P97813) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choli...	30	4.5
40	WDR50_ARATH (Q9FMU5) WD-repeat protein At5g14050	29	5.9
41	YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C	29	5.9
42	GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 pro...	29	5.9
43	PCX1_MOUSE (Q9QYC1) Pecanex-like protein 1 (Pecanex homolog) (Fr...	29	5.9
44	TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12	29	5.9
45	KCNQ4_MOUSE (Q9JK97) Potassium voltage-gated channel subfamily K...	29	5.9
46	YDEM_CAEEL (Q19124) Hypothetical WD-repeat protein F02E8.5	29	7.7
47	MMP15_HUMAN (P51511) Matrix metalloproteinase-15 precursor (EC 3...	29	7.7
48	SYK3_BUCBP (Q89A27) Putative lysyl-tRNA synthetase (EC 6.1.1.6) ...	29	7.7

>YM3M_CAEEL (P91343) Hypothetical WD-repeat protein F55F8.5|
          Length = 439

 Score = 36.6 bits (83), Expect = 0.037
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEMFFSKDVTT 197
           G  +A+   S+ SD    IS  +D+N+ IWN D         + +   S +    K+  T
Sbjct: 209 GHERAVECVSVNSDSTRAISGSVDTNLKIWNLDASDEATTYEKEEEEESAKKRRKKETKT 268

Query: 198 AVPWP--GVHRDR 230
            VP    G HRD+
Sbjct: 269 KVPMVTIGGHRDK 281

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>L2DTL_DROME (Q24371) Protein lethal(2)denticleless (Protein DTL83)|
          Length = 769

 Score = 35.8 bits (81), Expect = 0.063
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +3

Query: 9   KGLGKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTL 134
           KGL  S       L+ DG+YL+S   D   YIWN D+    L
Sbjct: 316 KGLLNSTFYIKSCLSPDGKYLLSGSSDERAYIWNLDHAEEPL 357

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>APAF_RAT (Q9EPV5) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1249

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 12   GLGKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVR 161
            G+G  KA+     T+DG+ LIS+  DS + +WN+        +   ++V+
Sbjct: 999  GIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQETVK 1048

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>APAF_MOUSE (O88879) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1249

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +3

Query: 12   GLGKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVR 161
            G+G  KA+     T+DG+ LIS+  DS + +WN+        +   ++V+
Sbjct: 999  GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVK 1048

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>ERCC8_BOVIN (Q5BIM8) DNA excision repair protein ERCC-8|
          Length = 397

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 51  TSDGRYLISTGMDSNVYIWNFDNPSNTL 134
           TSDG +L++ G D+ + +WN  N  NTL
Sbjct: 254 TSDGLHLLTVGTDNRMRLWNSSNGENTL 281

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>ERCC8_HUMAN (Q13216) DNA excision repair protein ERCC-8 (Cockayne syndrome WD|
           repeat protein CSA)
          Length = 396

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 51  TSDGRYLISTGMDSNVYIWNFDNPSNTL 134
           TSDG +L++ G D+ + +WN  N  NTL
Sbjct: 254 TSDGLHLLTVGTDNRMRLWNSSNGENTL 281

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>WD42_DICDI (P54686) WD-repeat protein 2|
          Length = 597

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +3

Query: 51  TSDGRYLISTGMDSNVYIWNFDNPS 125
           ++D +++ S  +DS +YIWN +NP+
Sbjct: 532 SNDSKFVASASLDSQIYIWNVENPT 556

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>STRN_SORMA (Q70M86) Striatin Pro11|
          Length = 845

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +3

Query: 30  ALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRS---CEMFFSKD 188
           ++S+ SL+ DGR L+S G D ++  W+ +  S T +    +S+R    C + +S+D
Sbjct: 772 SVSSLSLSPDGRELVSAGHDMSLRFWSLETRSCTQEMTCHRSMRGEGVCAVVWSQD 827

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>TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (Flocculation|
           suppressor protein) (Repressor AER2)
          Length = 713

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +3

Query: 12  GLGKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRS--CEMFF 179
           G G   ++ +   T DG+ ++S  +D +V +WN  N +N   K ++K+  S  CE+ +
Sbjct: 572 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANN---KSDSKTPNSGTCEVTY 626

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>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 63   RYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCE 170
            ++L+++G D+   IWNF     TL +G A  VR+ E
Sbjct: 1109 QFLVTSGQDNTARIWNFAGEQLTLCQGHADWVRNAE 1144

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>BCN1_ARATH (Q9M367) Beclin-1-like protein|
          Length = 443

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 464 ARRHYHHVPGSRYRRQTVG*PGAIYG-LRRGSEFLLWPRHRPPHAVGEEPCPRGTA 300
           A + ++  P S  +  ++    ++ G  R  + F++ PRH+PP + G  P PRG +
Sbjct: 40  AGKFFNDPPPSATQGSSIHGANSVLGSTRMDNSFVVLPRHKPPQSQGIPPRPRGAS 95

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>VE2_HPV04 (Q07849) Regulatory protein E2|
          Length = 402

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 91  PMSTYGILTIQATPYRKAKPNRFDRAKCSSPRT*QPRCHGR---GCIGTGMSSRP 246
           P ++Y  +T QA+P R+ KP + D    +SP T   R   R   G  G G    P
Sbjct: 218 PSTSYSEVTEQASPTRRRKPRKSDATSTTSPETEGVRLRRRRREGKSGPGSGETP 272

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>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 18   GKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEMFFSKDVTT 197
            G S  + + S + DGRY+ S   D  V IW  D    T        V S    FS D  T
Sbjct: 1570 GHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAGVMSA--IFSPDGKT 1627

Query: 198  AV 203
             +
Sbjct: 1628 LI 1629

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>RL3_SYNY3 (P73320) 50S ribosomal protein L3|
          Length = 213

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = -3

Query: 469 PWLAVTITMFQAADIAD--RQSASRGPFTGFAEEVSFSSGHVTDPLMPSAKNH-VPG 308
           P  AVT  +FQA D+ D   QS  RG F G+ +  +F  G++T      +KNH +PG
Sbjct: 94  PGDAVTADIFQAGDLVDVAGQSMGRG-FAGYQKRHNFRRGNMTH----GSKNHRLPG 145

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>ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayne syndrome WD|
           repeat protein CSA homolog)
          Length = 397

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 51  TSDGRYLISTGMDSNVYIWNFDNPSNTL 134
           TSDG +L++ G D+ + +WN  +  NTL
Sbjct: 254 TSDGLHLLTIGTDNRMRLWNSSSGDNTL 281

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>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)|
          Length = 743

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 54  SDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           S GR+ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 681 SCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 720

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>WDR57_PONPY (Q5RF51) WD-repeat protein 57|
          Length = 357

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWN 110
           G + +++  SL+S+G YL+S  MD+ V +W+
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263

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>WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5|
           snRNP-specific 40 kDa protein) (38 kDa splicing factor)
          Length = 357

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWN 110
           G + +++  SL+S+G YL+S  MD+ V +W+
Sbjct: 233 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 263

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>TLE2_MOUSE (Q9WVB2) Transducin-like enhancer protein 2|
          Length = 767

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 54  SDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           S GR+ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 705 SCGRWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 744

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>WDR57_MOUSE (Q6PE01) WD-repeat protein 57|
          Length = 358

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWN 110
           G + +++  SL+S+G YL+S  MD+ V +W+
Sbjct: 234 GHADSVTGLSLSSEGSYLLSNAMDNTVRVWD 264

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>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 85 kDa subunit)
           (p85) (TAFII-80)
          Length = 704

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPS 125
           G   ++S+ + ++ GRYL S  +D N+ IW+  N S
Sbjct: 574 GHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGS 609

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>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4|
            (Immediate-early protein IE175)
          Length = 1415

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
 Frame = +2

Query: 182  QGRDNRGAMAGGASGQACQAVPPDREI---CQHAGFTP--SWRRKPFPWDMVLRRRHEGV 346
            +GR +R A      G      PP   +   C +  F     + R P PW  VLR   E +
Sbjct: 949  RGRQDRAAFRQFPVGTVIGQTPPQSVLNAYCPNGAFVELVEFARIPEPWQEVLRYSPEAM 1008

Query: 347  CDVAR 361
             D+AR
Sbjct: 1009 ADIAR 1013

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>UNC37_CAEEL (O02482) Transcription factor unc-37 (Uncoordinated protein 37)|
          Length = 612

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEMFF 179
           G++ ISTG D+ +  W     ++  Q  E  SV SC++ F
Sbjct: 552 GKFFISTGKDNALNAWRTPYGASLFQLKENSSVLSCDISF 591

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>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4|
          Length = 376

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDN 119
           G +K++S+   +  G+YL ++  D  V IWN D+
Sbjct: 85  GHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDH 118

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>TLE1_XENLA (O42469) Enhancer of split groucho-like protein 1|
          Length = 767

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 54  SDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           S G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 705 SCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDV 744

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>TLE2_BRARE (O13166) Groucho 2 protein|
          Length = 761

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W+    ++  Q  E+ SV SC++
Sbjct: 701 GKWFVSTGKDNLLNAWSTPYGASIFQSKESSSVLSCDI 738

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>UCP4_HUMAN (O95847) Mitochondrial uncoupling protein 4 (UCP 4) (Solute carrier|
           family 25 member 27)
          Length = 323

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 161 IVRNVLLQGRDNRGAMAGGASGQAC--QAVPPDREICQHAGFTPSWRRKPFPWDMVLRRR 334
           I   ++ Q RD +G      S   C  QAV  +  +  + GF PSW R   PW MV    
Sbjct: 252 IKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMT-PWSMVFWLT 310

Query: 335 HEGVCDVA 358
           +E + +++
Sbjct: 311 YEKIREMS 318

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>AAC3_DICDI (P14197) AAC-rich mRNA clone AAC3 protein (Fragment)|
          Length = 437

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +3

Query: 15  LGKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRS 164
           +G  K  ++ +  ++G  + S+G D  V +WNFD   N+     + +  S
Sbjct: 121 IGNKKKSTSVAWNANGTKIASSGSDGIVRVWNFDPLGNSNNNNNSNNTSS 170

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>TLE4_MOUSE (Q62441) Transducin-like enhancer protein 4 (Groucho-related|
           protein 4) (Grg-4)
          Length = 766

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 706 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 743

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>TLE4_HUMAN (Q04727) Transducin-like enhancer protein 4|
          Length = 766

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 706 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 743

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>TLE3_RAT (Q9JIT3) Transducin-like enhancer protein 3 (rTLE3)|
          Length = 764

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 704 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 741

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>TLE1_BRARE (O13168) Groucho 1 protein (Fragment)|
          Length = 535

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 475 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 512

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>TLE1_MOUSE (Q62440) Transducin-like enhancer protein 1 (Groucho-related|
           protein 1) (Grg-1)
          Length = 770

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 710 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 747

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>TLE1_HUMAN (Q04724) Transducin-like enhancer protein 1 (ESG1) (E(Sp1) homolog)|
          Length = 770

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 710 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 747

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>TLE2_XENLA (O42478) Enhancer of split groucho-like protein 2 (Fragment)|
          Length = 198

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 138 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 175

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>SYM_AERPE (Q9YCY3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 572

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
 Frame = +2

Query: 134 TERRSQIGSIVRNVLLQGRDNRGAMAGGASGQACQAVPPDREICQHAGFTPSWRRKPFPW 313
           TE    IG+ V  VL   R     +A           P   ++ +H GF    RR    W
Sbjct: 384 TELNDDIGNFVNRVLSLVRSRMSGVA-----------PEPEDLGEHQGFVERVRRAA--W 430

Query: 314 DMV-------LRRRHEGVCDVARGETHFLGEARKW 397
            +        ++R  EG+ ++AR    +L   + W
Sbjct: 431 AVAEDLEAIRIKRATEGILEIAREGNAYLNRTQPW 465

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>TLE3_HUMAN (Q04726) Transducin-like enhancer protein 3 (ESG3)|
          Length = 772

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 712 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 749

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>TLE3_MOUSE (Q08122) Transducin-like enhancer protein 3 (ESG) (Grg-3)|
          Length = 771

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E+ SV SC++
Sbjct: 711 GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDI 748

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>PLD2_MOUSE (P97813) Phospholipase D2 (EC 3.1.4.4) (PLD 2) (Choline phosphatase|
           2) (Phosphatidylcholine-hydrolyzing phospholipase D2)
           (PLD1C) (mPLD2)
          Length = 933

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +3

Query: 33  LSTPSLTSDGRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEMFFSKDVTTAVPWP 212
           L TP+L SD     +  +  N + W   + SN + K   +  R  E F  ++ T  +PW 
Sbjct: 484 LQTPTLGSDPA--ATPDLSHNQFFWLGKDYSNLITKDWVQLDRPFEDFIDRETTPRMPWR 541

Query: 213 GV 218
            V
Sbjct: 542 DV 543

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>WDR50_ARATH (Q9FMU5) WD-repeat protein At5g14050|
          Length = 546

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +3

Query: 45  SLTSDGRYLISTGMDSNVYIWN 110
           + + DG++L+S+G D  VY+W+
Sbjct: 381 AFSEDGKHLLSSGGDGQVYVWD 402

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>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C|
          Length = 515

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWN 110
           G  K ++  + + DGRY++S   D+++ +W+
Sbjct: 400 GHQKLVNHVAFSPDGRYIVSASFDNSIKLWD 430

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>GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 protein)|
           (E(spl)m9/10)
          Length = 719

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 60  GRYLISTGMDSNVYIWNFDNPSNTLQKGEAKSVRSCEM 173
           G++ +STG D+ +  W     ++  Q  E  SV SC++
Sbjct: 659 GKWFVSTGKDNLLNAWRTPYGASIFQSKETSSVLSCDI 696

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>PCX1_MOUSE (Q9QYC1) Pecanex-like protein 1 (Pecanex homolog) (Fragment)|
          Length = 1460

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 208  GRGCIGTGMSSRPA*PRNLPACRLYTVMEEKAVPLGHGSSPTA 336
            G GC+  G+ S  +  +++PAC+ +T++       G GS+  A
Sbjct: 1301 GMGCVQHGLPSSSSSSQSIPACKHHTLVAFLGAEGGQGSATEA 1343

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>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12|
          Length = 586

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDNPSN 128
           G  +++ + + + DG+YL+S  +D+ + +W     SN
Sbjct: 456 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSN 492

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>KCNQ4_MOUSE (Q9JK97) Potassium voltage-gated channel subfamily KQT member 4|
           (Voltage-gated potassium channel subunit Kv7.4)
           (Potassium channel alpha subunit KvLQT4) (KQT-like 4)
           (Fragment)
          Length = 276

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 481 RITPPWLAVTITMFQAA-DIADRQSASRGPFTGFAEEVSFSSGHVTDPLMPSAKNHVPGE 305
           ++   W     T F+A+  +  R SA  GP    AEE S+      D +MP+ K  +   
Sbjct: 75  KVQKSWSFNDRTRFRASLRLKPRSSAEEGPSEEVAEEKSYQCELTVDDVMPAVKTVIRSV 134

Query: 304 RL 299
           R+
Sbjct: 135 RI 136

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>YDEM_CAEEL (Q19124) Hypothetical WD-repeat protein F02E8.5|
          Length = 578

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 18  GKSKALSTPSLTSDGRYLISTGMDSNVYIWNFDN 119
           G + A +      D ++ I++  D NV IWN DN
Sbjct: 334 GSNAAFTRIDYERDRKHFIASSNDKNVRIWNLDN 367

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>MMP15_HUMAN (P51511) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)|
           (MMP-15) (Membrane-type matrix metalloproteinase 2)
           (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix
           metalloproteinase) (MT2-MMP) (MT2MMP) (SMCP-2)
          Length = 669

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 28/117 (23%), Positives = 41/117 (35%)
 Frame = +3

Query: 105 WNFDNPSNTLQKGEAKSVRSCEMFFSKDVTTAVPWPGVHRDRHVKPSRLTEKSASMPALH 284
           W FDN    ++ G  KS+    M   + V     WP V R                P  +
Sbjct: 535 WKFDNERLRMEPGYPKSILRDFMGCQEHVEPGPRWPDVAR----------------PPFN 578

Query: 285 RHGGESRSPGTWFFADGMRGSVTWPEEKLTSSAKPVNGPRLADCLSAISAAWNMVIV 455
            HGG    PG    AD   G V   +    +      G R+   +  ++   N+V+V
Sbjct: 579 PHGG--AEPG----ADSAEGDVGDGDGDFGAGVNKDGGSRVVVQMEEVARTVNVVMV 629

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>SYK3_BUCBP (Q89A27) Putative lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA|
           ligase) (LysRS) (GX)
          Length = 322

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 323 LRRRHEGVCDVARGETHFLGEARKWPPASRLSVG 424
           ++RRH+G+C V   +      +R  PP S +++G
Sbjct: 264 IQRRHKGICSVEVDQFFLKSLSRGLPPCSGIAIG 297


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,647,930
Number of Sequences: 219361
Number of extensions: 2143103
Number of successful extensions: 6565
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 6092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6562
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result