ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal11m21 |
|---|---|
| Clone Library Name | barley_pub |
>PSL4_MOUSE (Q9CUS9) Signal peptide peptidase-like 3 (EC 3.4.23.-) (SPP-like 3| protein) (Intramembrane protease 2) (IMP2) (Presenilin-like protein 4) Length = 384 Score = 127 bits (319), Expect = 3e-29 Identities = 63/154 (40%), Positives = 93/154 (60%) Frame = +1 Query: 145 TLDRSQALMIPLASSCSLLLMFYLFSSVSHLVTAFTAVASVMALFFCLSPSIAYAKSQLN 324 T+D +QAL +P+ +S SLL+MF+ F SV + T TAV + +A F L P Y + Sbjct: 67 TIDSTQALFLPIGASVSLLVMFFFFDSVQVVFTICTAVLATIAFAFLLLPMCQYLTRPCS 126 Query: 325 LMDPFVSRCCSKSFTRLQGLLLTFCISTVAVWLVTGHWLLNNVLGISICIAFVSHVRLPN 504 + CC + FT + L + + V +W++TGHWLL + L + +C+A ++ RLP+ Sbjct: 127 PQNKISFGCCGR-FTAAELLSFSLSVMLVLIWVLTGHWLLMDALAMGLCVAMIAFDRLPS 185 Query: 505 IKICSLLLICLFVYDVFWVFFSERFFGANVMVSV 606 +K+ LLL L +YDVFWVFFS F +NVMV V Sbjct: 186 LKVSCLLLSGLLIYDVFWVFFSAYIFNSNVMVKV 219
>PSL4_HUMAN (Q8TCT6) Signal peptide peptidase-like 3 (EC 3.4.23.-) (SPP-like 3| protein) (Intramembrane protease 2) (IMP2) (Presenilin-like protein 4) Length = 385 Score = 122 bits (306), Expect = 8e-28 Identities = 60/153 (39%), Positives = 91/153 (59%) Frame = +1 Query: 148 LDRSQALMIPLASSCSLLLMFYLFSSVSHLVTAFTAVASVMALFFCLSPSIAYAKSQLNL 327 +D ++A +P+ + SLL+MF+ F SV + T TAV + +A F L P Y + Sbjct: 69 MDSTRARFLPMGACVSLLVMFFFFDSVQVVFTICTAVLATIAFAFLLLPMCQYLTRPCSP 128 Query: 328 MDPFVSRCCSKSFTRLQGLLLTFCISTVAVWLVTGHWLLNNVLGISICIAFVSHVRLPNI 507 + CC + FT + L + + V +W++TGHWLL + L + +C+A ++ VRLP++ Sbjct: 129 QNKISFGCCGR-FTAAELLSFSLSVMLVLIWVLTGHWLLMDALAMGLCVAMIAFVRLPSL 187 Query: 508 KICSLLLICLFVYDVFWVFFSERFFGANVMVSV 606 K+ LLL L +YDVFWVFFS F +NVMV V Sbjct: 188 KVSCLLLSGLLIYDVFWVFFSAYIFNSNVMVKV 220
>PSL1_CHICK (Q5F383) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein| SPP-like 2B) (Protein SPPL2b) Length = 596 Score = 77.8 bits (190), Expect = 2e-14 Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 9/148 (6%) Frame = +1 Query: 190 CSLLLMFYLF-SSVSHLVTAFTAVASVMALFFCLSPSIA-YAKSQLNLMDPFVSRCCSKS 363 CS+L++ Y F + +++ +A+ + L+ CLSP + + + + D + + Sbjct: 230 CSMLVLLYFFYDHLVYVIIGIFCLAASIGLYSCLSPFVRRFPLGKCRIPDNNLPYFHKRP 289 Query: 364 FTRLQGLLLTFCISTVAVWLVTGH-----WLLNNVLGISICIAFVSHVRLPNIKICSLLL 528 R+ LL FCIS VW V + W+L + LGI+ C+ + +RLP K C+LLL Sbjct: 290 QVRIL-LLAVFCISVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKGCTLLL 348 Query: 529 ICLFVYDVFWVFFSERF--FGANVMVSV 606 + LFVYDVF+VF + G ++MV V Sbjct: 349 LVLFVYDVFFVFITPFLTKTGESIMVEV 376
>PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein| SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4) (IMP4) (Presenilin-like protein 1) Length = 592 Score = 77.8 bits (190), Expect = 2e-14 Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 13/152 (8%) Frame = +1 Query: 190 CSLL-LMFYLFSSVSHLVTAFTAVASVMALFFCLSPSIA---YAKSQL--NLMDPFVSRC 351 CS+L L++Y + + ++V +AS L+ CL+P + + K ++ N + F R Sbjct: 234 CSMLVLLYYFYDLLVYVVIGIFCLASATGLYSCLAPCVRRLPFGKCRIPNNSLPYFHKRP 293 Query: 352 CSKSFTRLQGLLLTFCISTVAVWLVTGH-----WLLNNVLGISICIAFVSHVRLPNIKIC 516 ++ LL FC++ VW V + W+L + LGI+ C+ + +RLP K C Sbjct: 294 QARML-----LLALFCVAVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKAC 348 Query: 517 SLLLICLFVYDVFWVFFSERF--FGANVMVSV 606 +LLL+ LF+YD+F+VF + G+++MV V Sbjct: 349 TLLLLVLFLYDIFFVFITPFLTKSGSSIMVEV 380
>PSL1_RAT (Q5PQL3) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein| SPP-like 2B) (Protein SPPL2b) Length = 577 Score = 73.9 bits (180), Expect = 3e-13 Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 12/149 (8%) Frame = +1 Query: 196 LLLMFYLFSSVSHLVTAFTAVASVMALFFCLSPSI-----AYAKSQLNLMDPFVSRCCSK 360 L+L++Y + + +++ +AS L+ CL+P + + N + F R ++ Sbjct: 230 LVLLYYFYDRLVYVIIGIFCLASSTGLYSCLAPCVRKLPFCTCRVPDNNLPYFHKRPQAR 289 Query: 361 SFTRLQGLLLTFCISTVAVWLVTGH-----WLLNNVLGISICIAFVSHVRLPNIKICSLL 525 LL FC++ VW V + W+L + LGI+ C+ + +RLP K C+LL Sbjct: 290 ML-----LLALFCVTVSVVWGVFRNEDQWAWVLQDTLGIAFCLYMLRTIRLPTFKACTLL 344 Query: 526 LICLFVYDVFWVFFSERF--FGANVMVSV 606 L+ LFVYD+F+VF + G ++MV V Sbjct: 345 LLVLFVYDIFFVFITPYLTKSGNSIMVEV 373
>PSL1_MOUSE (Q3TD49) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein| SPP-like 2B) (Protein SPPL2b) Length = 578 Score = 72.8 bits (177), Expect = 7e-13 Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 12/149 (8%) Frame = +1 Query: 196 LLLMFYLFSSVSHLVTAFTAVASVMALFFCLSPSI-----AYAKSQLNLMDPFVSRCCSK 360 L+L++Y + + +++ +AS L+ CL+P + + N + F R ++ Sbjct: 230 LVLLYYFYDRLVYVIIGIFCLASSTGLYSCLAPFVRKLPFCTCRVPDNNLPYFHKRPQAR 289 Query: 361 SFTRLQGLLLTFCISTVAVWLVTGH-----WLLNNVLGISICIAFVSHVRLPNIKICSLL 525 LL FC++ VW + + W+L + LGI+ C+ + +RLP K C+LL Sbjct: 290 ML-----LLALFCVTVSVVWGIFRNEDQWAWVLQDTLGIAFCLYMLKTIRLPTFKACTLL 344 Query: 526 LICLFVYDVFWVFFSERF--FGANVMVSV 606 L+ LF+YD+F+VF + G ++MV V Sbjct: 345 LLVLFIYDIFFVFITPFLTKSGNSIMVEV 373
>PSL2_MOUSE (Q9JJF9) Signal peptide peptidase-like 2A (EC 3.4.23.-) (SPP-like| 2A protein) (SPPL2a protein) (Intramembrane protease 3) (IMP3) (Presenilin-like protein 2) Length = 523 Score = 71.2 bits (173), Expect = 2e-12 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 6/131 (4%) Frame = +1 Query: 196 LLLMFYLFSSVSHLVTAFTAVASVMALFFCLSPSIAYAK-SQLNLMDPFVSRCCSKSFTR 372 ++L+++ + + +++ A +AS M+L+ CLS I Q ++ CC K+ Sbjct: 238 IVLLYFFYRWLVYVMIAIFCIASSMSLYNCLSALIHRMPCGQCTIL------CCGKNIKV 291 Query: 373 LQGLLLTFCISTVAVWLVTGH-----WLLNNVLGISICIAFVSHVRLPNIKICSLLLICL 537 L CIS VW V + W+L ++LGI+ C+ + ++LPN C +LL L Sbjct: 292 SLIFLSGLCISVAVVWAVFRNEDRWAWILQDILGIAFCLNLIKTMKLPNFMSCVILLGLL 351 Query: 538 FVYDVFWVFFS 570 +YDVF+VF + Sbjct: 352 LIYDVFFVFIT 362
>PSL2_HUMAN (Q8TCT8) Signal peptide peptidase-like 2A (EC 3.4.23.-) (Protein| SPP-like 2A) (Protein SPPL2a) (Intramembrane protease 3) (IMP3) (Presenilin-like protein 2) Length = 520 Score = 68.2 bits (165), Expect(2) = 2e-12 Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 8/164 (4%) Frame = +1 Query: 103 KEMERNLDFSEASITLDRSQALMIPLASSCSLLLMFYLFSSVSHLVTAFTAVASVMALFF 282 K+ E L FS ++ + + ++L+++ + + +++ A +AS M+L+ Sbjct: 210 KKKEEYLTFSPLTVVI-------FVVICCVMMVLLYFFYKWLVYVMIAIFCIASAMSLYN 262 Query: 283 CLSP---SIAYAKSQLNLMDPFVSRCCSKSFTRLQGLLLTFCISTVAVWLVTGH-----W 438 CL+ I Y + + C K+ L CI+ VW V + W Sbjct: 263 CLAALIHKIPYGQCTI--------ACRGKNMEVRLIFLSGLCIAVAVVWAVFRNEDRWAW 314 Query: 439 LLNNVLGISICIAFVSHVRLPNIKICSLLLICLFVYDVFWVFFS 570 +L ++LGI+ C+ + ++LPN K C +LL L +YDVF+VF + Sbjct: 315 ILQDILGIAFCLNLIKTLKLPNFKSCVILLGLLLLYDVFFVFIT 358 Score = 23.1 bits (48), Expect(2) = 2e-12 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +3 Query: 24 SSPSAFFLISAIFVLWVLSIARSGPWQG 107 S P+ + + IFV+ V ++A G W G Sbjct: 164 SWPNFDYTMVVIFVIAVFTVALGGYWSG 191
>HM13_HUMAN (Q8TCT9) Minor histocompatibility antigen H13 (EC 3.4.99.-) (Signal| peptide peptidase) (Presenilin-like protein 3) (hIMP1 protein) Length = 377 Score = 65.1 bits (157), Expect = 2e-10 Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 23/187 (12%) Frame = +1 Query: 115 RNLDFSEASITLDRSQALMIPLASSCSLL---LMFYLFSS--VSHLVTAFTAVASVMALF 279 R + S+ T+ A P+ +SC+LL L F +FS ++ L++ + V ++AL Sbjct: 59 RGKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALS 118 Query: 280 FCLSPSIAYAKSQLNLMDP--FVSRCCSKSFTRLQG---------------LLLTFCIST 408 +SP +N P F +R FT+ G L+ S Sbjct: 119 HTISPF-------MNKFFPASFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSI 171 Query: 409 VAVW-LVTGHWLLNNVLGISICIAFVSHVRLPNIKICSLLLICLFVYDVFWVFFSERFFG 585 V VW L+ HW+ NN+ G++ + V + L N+ +LL LF+YDVFWV FG Sbjct: 172 VGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWV------FG 225 Query: 586 ANVMVSV 606 NVMV+V Sbjct: 226 TNVMVTV 232
>HM13_MOUSE (Q9D8V0) Minor histocompatibility antigen H13 (EC 3.4.99.-) (Signal| peptide peptidase) (Presenilin-like protein 3) Length = 378 Score = 64.7 bits (156), Expect = 2e-10 Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 23/187 (12%) Frame = +1 Query: 115 RNLDFSEASITLDRSQALMIPLASSCSLL---LMFYLFSS--VSHLVTAFTAVASVMALF 279 R S+ T+ A P+ +SC+LL L F +FS ++ L++ + V ++AL Sbjct: 59 RGKSSSDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALS 118 Query: 280 FCLSPSIAYAKSQLNLMDP--FVSRCCSKSFTRLQG---------------LLLTFCIST 408 +SP +N P F +R FT+ G L+ S Sbjct: 119 HTISPF-------MNKFFPANFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSV 171 Query: 409 VAVW-LVTGHWLLNNVLGISICIAFVSHVRLPNIKICSLLLICLFVYDVFWVFFSERFFG 585 V VW L+ HW+ NN+ G++ + V + L N+ +LL LF+YD+FWV FG Sbjct: 172 VGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDIFWV------FG 225 Query: 586 ANVMVSV 606 NVMV+V Sbjct: 226 TNVMVTV 232
>YJ95_CAEEL (P49049) Hypothetical protein T05E11.5 in chromosome IV| Length = 468 Score = 60.5 bits (145), Expect = 4e-09 Identities = 31/81 (38%), Positives = 44/81 (54%) Frame = +1 Query: 364 FTRLQGLLLTFCISTVAVWLVTGHWLLNNVLGISICIAFVSHVRLPNIKICSLLLICLFV 543 F R + L C + L+ HW+ NN++G+S I + + L + K SLLL+ LF Sbjct: 245 FDRYDIIALLMCSPILISHLLKRHWITNNIIGVSFSILGIERLHLASFKAGSLLLVGLFF 304 Query: 544 YDVFWVFFSERFFGANVMVSV 606 YD+FWV FG +VM SV Sbjct: 305 YDIFWV------FGTDVMTSV 319
>YKK0_YEAST (P34248) Hypothetical 67.5 kDa protein in APE1/LAP4-CWP1 intergenic| region Length = 587 Score = 49.7 bits (117), Expect = 7e-06 Identities = 25/69 (36%), Positives = 44/69 (63%) Frame = +1 Query: 400 ISTVAVWLVTGHWLLNNVLGISICIAFVSHVRLPNIKICSLLLICLFVYDVFWVFFSERF 579 +STV +L WL++N + +++ I ++ ++L N+K +L+LI LF YD+ +V Sbjct: 317 VSTVYFYLSPNDWLISNAVSMNMAIWSIAQLKLKNLKSGALILIALFFYDICFV------ 370 Query: 580 FGANVMVSV 606 FG +VMV+V Sbjct: 371 FGTDVMVTV 379
>DEGP6_ARATH (Q9C691) Putative protease Do-like 6, chloroplast precursor (EC| 3.4.21.-) Length = 257 Score = 33.1 bits (74), Expect = 0.64 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = +1 Query: 214 LFSSVSHLVTAFTAVASVMALFFCLSPSIAYAKSQLNLMDPFVSRCCS 357 LF SV H+V F+ S F SPS+ +S N +SRCCS Sbjct: 2 LFRSVHHIVARFSNSTSTPIHRFFYSPSLLRRRSSFNA--SLISRCCS 47
>TTL12_HUMAN (Q14166) Tubulin--tyrosine ligase-like protein 12| Length = 644 Score = 31.6 bits (70), Expect = 1.9 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = +1 Query: 535 LFVYDVFWVFFSERFFGAN 591 LFVYDVFW+ FS R F N Sbjct: 485 LFVYDVFWLRFSNRAFALN 503
>CKLF5_MOUSE (Q9D6G9) CKLF-like MARVEL transmembrane domain-containing protein 5| (Chemokine-like factor superfamily member 5) Length = 156 Score = 30.8 bits (68), Expect = 3.2 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 9/117 (7%) Frame = +1 Query: 250 TAVASVMALFFCLSPSI----AYAKSQLNLMDPFVSRCCSK---SFTRLQGLLLTF--CI 402 T +A +F C + SI A A + + F+ C ++ F RL L F C+ Sbjct: 40 TELALTFIIFICFTASISAYMAAALLEFLITLAFLFLCATQYYQRFDRLNWPCLDFLRCL 99 Query: 403 STVAVWLVTGHWLLNNVLGISICIAFVSHVRLPNIKICSLLLICLFVYDVFWVFFSE 573 S + ++LV + + G +I AFV ++L+ +F YD F ++ +E Sbjct: 100 SAIVIFLVVSFAAVTSREGAAIA-AFVF----------GIILVSVFAYDAFKIYRTE 145
>PIT_BUCBP (Q89A24) Low-affinity inorganic phosphate transporter| Length = 499 Score = 30.8 bits (68), Expect = 3.2 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 5/126 (3%) Frame = +1 Query: 184 SSCSLLLMFYLFSSVSHLVTAFTAVASVMALFFCLSPSIAYAKSQL---NLMDPFVSRCC 354 S+ ++ L+ Y S + + + + + +FF SIAYA L NL+ + C Sbjct: 36 SANAIALIIYTRSMNEKMAILISGILNFLGVFFG-GLSIAYAIIYLLPSNLLLNINTSCG 94 Query: 355 SKSFTR--LQGLLLTFCISTVAVWLVTGHWLLNNVLGISICIAFVSHVRLPNIKICSLLL 528 K+ L +L C +++ + H L+ +++GI+ AF++ N I SL+ Sbjct: 95 LKAIFSILLSAILWNLCTWYLSLPTSSSHTLIGSIIGINFVNAFIN-----NFSILSLIS 149 Query: 529 ICLFVY 546 +Y Sbjct: 150 FNKIIY 155
>OR7G3_HUMAN (Q8NG95) Olfactory receptor 7G3 (OST085)| Length = 312 Score = 30.4 bits (67), Expect = 4.2 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Frame = +1 Query: 166 LMIPLASSCSLLLMFYLFSSVSHLVTAFTAVASVMALFFCLSPSIAYAKSQLNLMDPFVS 345 L + LA+ LL+ +S SHL T + S+++L S K +N+ + Sbjct: 32 LSMYLATMLGNLLIILAVNSDSHLHTPMYFLLSILSLVDICFTSTTMPKMLVNIQ----A 87 Query: 346 RCCSKSFTRLQGLLLTFCISTVAVWLVTGHWLLNNV-LGISICIAFVSHVRLPNIKICSL 522 + S ++T G L C V V L G ++ ++IC +V + N K+C L Sbjct: 88 QAQSINYT---GCLTQICFVLVFVGLENGILVMMAYDRFVAICHPLRYNV-IMNPKLCGL 143 Query: 523 LLICLFVYDV 552 LL+ F+ V Sbjct: 144 LLLLSFIVSV 153
>NU5C_CARCG (Q9TL56) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 743 Score = 30.0 bits (66), Expect = 5.4 Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 21/158 (13%) Frame = +1 Query: 118 NLDFS-EASITLDRSQALMIPLASSCSLLLMFYLFSSVSH-------------------- 234 N DFS E +D ++M+ L ++ ++++ Y S +SH Sbjct: 78 NNDFSLELGYLIDPLTSIMLILITTVGIMVLIYSDSYMSHDQGYLRFFAYMSFFSTSMLG 137 Query: 235 LVTAFTAVASVMALFFCLSPSIAYAKSQLNLMDPFVSRCCSKSFTRLQGLLLTFCISTVA 414 LVT+ + + +F+ L +Y P + C K+F + L + + Sbjct: 138 LVTSSNLIQ--IYIFWELVGMCSYLLIGFWFTRPLAANACQKAFVTNRIGDLGLLLGILG 195 Query: 415 VWLVTGHWLLNNVLGISICIAFVSHVRLPNIKICSLLL 528 + +TG + ++ I + + + V L + IC++LL Sbjct: 196 FYWITGSFEFRDLFQIVTNLIYNNEVNLVFLTICAVLL 233
>CLC4E_RAT (Q67EQ1) C-type lectin domain family 4 member E (C-type lectin| superfamily member 9) (Macrophage-inducible C-type lectin) Length = 215 Score = 29.3 bits (64), Expect = 9.3 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -2 Query: 455 STLFSNQCPVTSHTATVLMQKVNSNPCNRVNDLEQHLDTNGSIRLSCDL 309 S F +C VT H+ + QK P + +L +L+ +GS++ C L Sbjct: 36 SVCFITRCVVTYHSFQIYGQK-KLQPHKTIKELSCYLEASGSVKNCCPL 83
>Y864_RICPR (Q9ZCA2) Hypothetical protein RP864 precursor| Length = 213 Score = 29.3 bits (64), Expect = 9.3 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +3 Query: 276 LLLSVSIYCLRQVAAQSNGSVRVEVLFQVIYPVARIAVDFLHKHG-GSVAGNRALVAK 446 L L+V +CL + A +N ++ + + + +A+DF + G + + L+ K Sbjct: 5 LFLTVICFCLSSIKAYANNNIHLSEFKNYLRTIKSVAIDFTQEDSYGKIVKGKLLIQK 62
>ESG2_TRYBB (P04478) VSG expression site-associated protein 221A precursor| (ESAG protein) Length = 329 Score = 29.3 bits (64), Expect = 9.3 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = -2 Query: 377 CNRVNDLEQHLDTNGSI---RLSCDLA*AIDGDRQKKSAITEATAVNAVTRCDTDENR*N 207 C RV D ++H ++ R D + + +KK +TE NA D E R Sbjct: 27 CTRVADHKEHAPVTEAVCYLRCLSDALNKLYSEGEKKLLVTEEVYANASLILDDMEGRAG 86 Query: 206 ISSRLHELARGIM 168 SS + RG+M Sbjct: 87 ESSTYLSVIRGVM 99
>MRAY_WOLSU (Q7M7X0) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 352 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +3 Query: 18 ISSSPSAFFLISAIFVLWVLS-IARSGPWQGDGEELGLLRGIHHT*SVTG 164 IS + FLI +IFV+ +S I + G ++ G+ + L+ IHH V G Sbjct: 275 ISKNEFLLFLIGSIFVIETVSVILQIGSYKTRGKRIFLMAPIHHHFEVKG 324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,394,895 Number of Sequences: 219361 Number of extensions: 1673801 Number of successful extensions: 4803 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4795 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
