ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal11m17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192178.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 369 bits (186), Expect = 7e-99 Identities = 276/306 (90%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgttga 372 |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 45 ggaggagaggaaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcga 104 Query: 373 ggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgagatact 432 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | Sbjct: 105 ggccatgatgctcgactcccgcgccgccgatctcgacaaggaggagcgccccgagatatt 164 Query: 433 gtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaataggtcg 492 ||||||||||||| | || |||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 165 gtctttacttcctccttacgaaggaaaatcagtactggaacttggtgctggaataggtcg 224 Query: 493 ctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcattggaag 552 ||| ||||||||||| | || |||||||||||||||||||||||||||||||||| ||| Sbjct: 225 cttcactggagaactagtgaaaacagctgggcatgttcttgcaatggatttcattgaaag 284 Query: 553 tgtgattaaaaagaatgaaagcataaatggccattacgaaaatgcatccttcatgtgtgc 612 ||||||||| ||||||||||||||||| || || || | ||||||||||| |||||||| Sbjct: 285 tgtgattaagaagaatgaaagcataaacggtcaccacaagaatgcatcctttatgtgtgc 344 Query: 613 tgatgt 618 ||||| Sbjct: 345 ggatgt 350
>gb|AY551100.1| Oryza sativa (indica cultivar-group) phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1986 Score = 369 bits (186), Expect = 7e-99 Identities = 276/306 (90%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgttga 372 |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 243 ggaggagaggaaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcga 302 Query: 373 ggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgagatact 432 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | Sbjct: 303 ggccatgatgctcgactcccgcgccgccgatctcgacaaggaggagcgccccgagatatt 362 Query: 433 gtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaataggtcg 492 ||||||||||||| | || |||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 363 gtctttacttcctccttacgaaggaaaatcagtactggaacttggtgctggaataggtcg 422 Query: 493 ctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcattggaag 552 ||| ||||||||||| | || |||||||||||||||||||||||||||||||||| ||| Sbjct: 423 cttcactggagaactagtgaaaacagctgggcatgttcttgcaatggatttcattgaaag 482 Query: 553 tgtgattaaaaagaatgaaagcataaatggccattacgaaaatgcatccttcatgtgtgc 612 ||||||||| ||||||||||||||||| || || || | ||||||||||| |||||||| Sbjct: 483 tgtgattaagaagaatgaaagcataaacggtcaccacaagaatgcatcctttatgtgtgc 542 Query: 613 tgatgt 618 ||||| Sbjct: 543 ggatgt 548 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 63 cgtgatcccgtcgtggatgcagccgcgtgggaggtcgttcaaccgccgctcccgcagctt 122 |||||||| || |||||||||||| |||||| | || ||||||||||||||||| ||||| Sbjct: 12 cgtgatccggtggtggatgcagcctcgtgggcgatccttcaaccgccgctcccggagctt 71 Query: 123 ctcccgcgcccgcctcgccgtcgagggatcctaatctcgcccgcctcc 170 ||||||||||||||||||| ||||||| || |||||||||| |||||| Sbjct: 72 ctcccgcgcccgcctcgccatcgaggggtcttaatctcgccggcctcc 119
>dbj|AK069137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008P07, full insert sequence Length = 2069 Score = 369 bits (186), Expect = 7e-99 Identities = 276/306 (90%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgttga 372 |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 328 ggaggagaggaaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcga 387 Query: 373 ggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgagatact 432 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | Sbjct: 388 ggccatgatgctcgactcccgcgccgccgatctcgacaaggaggagcgccccgagatatt 447 Query: 433 gtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaataggtcg 492 ||||||||||||| | || |||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 448 gtctttacttcctccttacgaaggaaaatcagtactggaacttggtgctggaataggtcg 507 Query: 493 ctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcattggaag 552 ||| ||||||||||| | || |||||||||||||||||||||||||||||||||| ||| Sbjct: 508 cttcactggagaactagtgaaaacagctgggcatgttcttgcaatggatttcattgaaag 567 Query: 553 tgtgattaaaaagaatgaaagcataaatggccattacgaaaatgcatccttcatgtgtgc 612 ||||||||| ||||||||||||||||| || || || | ||||||||||| |||||||| Sbjct: 568 tgtgattaagaagaatgaaagcataaacggtcaccacaagaatgcatcctttatgtgtgc 627 Query: 613 tgatgt 618 ||||| Sbjct: 628 ggatgt 633
>dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081D06, full insert sequence Length = 3221 Score = 327 bits (165), Expect = 3e-86 Identities = 228/249 (91%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgttga 372 |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 295 ggaggagaggaaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcga 354 Query: 373 ggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgagatact 432 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | Sbjct: 355 ggccatgatgctcgactcccgcgccgccgatctcgacaaggaggagcgccccgagatatt 414 Query: 433 gtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaataggtcg 492 ||||||||||||| | || |||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 415 gtctttacttcctccttacgaaggaaaatcagtactggaacttggtgctggaataggtcg 474 Query: 493 ctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcattggaag 552 ||| ||||||||||| | || |||||||||||||||||||||||||||||||||| ||| Sbjct: 475 cttcactggagaactagtgaaaacagctgggcatgttcttgcaatggatttcattgaaag 534 Query: 553 tgtgattaa 561 ||||||||| Sbjct: 535 tgtgattaa 543 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 63 cgtgatcccgtcgtggatgcagccgcgtgggaggtcgttcaaccgccgctcccgcagctt 122 |||||||| || |||||||||||| |||||| | || ||||||||||||||||| ||||| Sbjct: 64 cgtgatccggtggtggatgcagcctcgtgggcgatccttcaaccgccgctcccggagctt 123 Query: 123 ctcccgcgcccgcctcgccgtcgagggatcctaatctcgcccgcctcc 170 ||||||||||||||||||| ||||||| || |||||||||| |||||| Sbjct: 124 ctcccgcgcccgcctcgccatcgaggggtcttaatctcgccggcctcc 171 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 564 agaatgaaagcataaatggccattacgaaaatgcatccttcatgtgtgctgatgt 618 |||||||||||||||| || || || | ||||||||||| |||||||| ||||| Sbjct: 691 agaatgaaagcataaacggtcaccacaagaatgcatcctttatgtgtgcggatgt 745
>gb|AY626156.3| Zea mays putative phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1806 Score = 293 bits (148), Expect = 3e-76 Identities = 265/304 (87%) Strand = Plus / Plus Query: 317 gagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgttgaggcc 376 |||||| ||||||||||||| |||||||||||||||||| |||| |||| | |||||| Sbjct: 189 gagaggaaggcgcagaagagctactgggaggagcactccggggagctcaacctcgaggcc 248 Query: 377 atgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgagatactgtct 436 || ||||||||||||||||||||||| || ||||||||||||||||||||| | |||||| Sbjct: 249 attatgctcgactcccgtgccgccgaactcgacaaggaggagcgccccgaggttctgtct 308 Query: 437 ttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaataggtcgcttt 496 |||||||||||||||||||| ||||| | |||||||| || || |||||||| |||||| Sbjct: 309 ttacttccttcatatgaagggaaatctatactggagctgggagctggaataggccgcttt 368 Query: 497 actggagaactggctaagacagctgggcatgttcttgcaatggatttcattggaagtgtg 556 ||||| ||||||||||| ||| ||||||||||| ||||| |||||||| ||| ||||||| Sbjct: 369 actggtgaactggctaaaacatctgggcatgtttttgcagtggatttcgttgaaagtgtg 428 Query: 557 attaaaaagaatgaaagcataaatggccattacgaaaatgcatccttcatgtgtgctgat 616 ||||||||||||| ||| ||||||| || || | || ||||||| |||||||||||| Sbjct: 429 attaaaaagaatggaagtataaatgatcactatggcaacacatcctttatgtgtgctgat 488 Query: 617 gtta 620 |||| Sbjct: 489 gtta 492 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 113 cccgcagcttctcccgcgcccgcctcgccgtcgaggg 149 |||| |||||||||| |||||| ||||||||||||| Sbjct: 61 cccggagcttctcccaagcccgcgtcgccgtcgaggg 97
>ref|XM_475841.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 232 bits (117), Expect = 1e-57 Identities = 234/273 (85%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgt 369 ||||| ||||||| |||||||| ||| ||||||||||||||||||| ||||||||| || Sbjct: 30 ggaggtggagaggaaggcgcagcggagctactgggaggagcactccaaggacctcaccgt 89 Query: 370 tgaggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgagat 429 ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| | Sbjct: 90 cgaggccatgatgctcgactcccgcgccgccgacctcgacaaggaggagcgccccgaggt 149 Query: 430 actgtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaatagg 489 |||||| |||| ||||| || |||| |||||||| ||||||||||| || |||||||| Sbjct: 150 cctgtctgtactcccttcttacaaagggaaatcagtactggagcttggtgctggaatagg 209 Query: 490 tcgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcattgg 549 ||||||||||| |||||||| || |||||| |||||| | || | || ||||||| Sbjct: 210 acgctttactggggaactggcaaaagaagctggccatgttttagccctagacttcattga 269 Query: 550 aagtgtgattaaaaagaatgaaagcataaatgg 582 |||||||||||| |||||||| | ||||||||| Sbjct: 270 aagtgtgattaagaagaatgagaacataaatgg 302
>gb|AY103779.1| Zea mays PCO126548 mRNA sequence Length = 2333 Score = 180 bits (91), Expect = 4e-42 Identities = 214/255 (83%) Strand = Plus / Plus Query: 328 gcagaagaggtactgggaggagcactccagggacctcactgttgaggccatgatgctcga 387 ||||||||| ||||||||||||||||||| | ||||||||| ||| ||||||||||||| Sbjct: 466 gcagaagagctactgggaggagcactccaagtgcctcactgtcgagtccatgatgctcga 525 Query: 388 ctcccgtgccgccgatctggacaaggaggagcgccccgagatactgtctttacttccttc 447 |||||| |||||||| || |||||||| ||||| |||||||| |||||||| ||||| || Sbjct: 526 ctcccgcgccgccgacctcgacaaggaagagcgacccgagatcctgtctttgcttccctc 585 Query: 448 atatgaaggaaaatcagtgctggagcttggcgcgggaataggtcgctttactggagaact 507 || |||| |||||||| || || || || || ||||| || |||||||||||||| || Sbjct: 586 ttacaaagggaaatcagttctagaactcggtgctggaattggacgctttactggagatct 645 Query: 508 ggctaagacagctgggcatgttcttgcaatggatttcattggaagtgtgattaaaaagaa 567 ||| || ||||||||| ||||| ||| | || || |||| |||||||||||| ||||| Sbjct: 646 ggcaaaagaagctgggcacgttctggcactagactttattgaaagtgtgattaagaagaa 705 Query: 568 tgaaagcataaatgg 582 ||||||||||||| Sbjct: 706 ccaaagcataaatgg 720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 102 caaccgccgctcccgcagcttctcccgcgcccgcctcgccgtcgaggg 149 |||| ||||||||||| ||||||||||| |||||| ||| |||||||| Sbjct: 181 caactgccgctcccgcggcttctcccgctcccgccgcgcagtcgaggg 228
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 172 bits (87), Expect = 9e-40 Identities = 108/115 (93%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgttga 372 |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 28733756 ggaggagaggaaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcga 28733815 Query: 373 ggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgag 427 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 28733816 ggccatgatgctcgactcccgcgccgccgatctcgacaaggaggagcgccccgag 28733870 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Plus Query: 426 agatactgtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaa 485 ||||| |||||||||||||| | || |||||||||||||| ||||| ||||| || |||| Sbjct: 28735072 agatattgtctttacttcctccttacgaaggaaaatcagtactggaacttggtgctggaa 28735131 Query: 486 taggtcgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttca 545 |||||||||| ||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 28735132 taggtcgcttcactggagaactagtgaaaacagctgggcatgttcttgcaatggatttca 28735191 Query: 546 ttggaagtgtgattaa 561 ||| |||||||||||| Sbjct: 28735192 ttgaaagtgtgattaa 28735207 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 63 cgtgatcccgtcgtggatgcagccgcgtgggaggtcgttcaaccgccgctcccgcagctt 122 |||||||| || |||||||||||| |||||| | || ||||||||||||||||| ||||| Sbjct: 28733306 cgtgatccggtggtggatgcagcctcgtgggcgatccttcaaccgccgctcccggagctt 28733365 Query: 123 ctcccgcgcccgcctcgccgtcgagggatcctaatctcgcccgcctcc 170 ||||||||||||||||||| ||||||| || |||||||||| |||||| Sbjct: 28733366 ctcccgcgcccgcctcgccatcgaggggtcttaatctcgccggcctcc 28733413 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 564 agaatgaaagcataaatggccattacgaaaatgcatccttcatgtgtgctgatgt 618 |||||||||||||||| || || || | ||||||||||| |||||||| ||||| Sbjct: 28735355 agaatgaaagcataaacggtcaccacaagaatgcatcctttatgtgtgcggatgt 28735409 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ccgccgctcccgcagcttctcccgcgccc 133 |||||||||||||||| || ||||||||| Sbjct: 10722038 ccgccgctcccgcagcctcgcccgcgccc 10722066 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 36482965 ggaggaggagagggaggcgc 36482946 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 ccgccgctcccgcagcttctcccgcgcc 132 ||||||||||||| || ||||||||||| Sbjct: 20143333 ccgccgctcccgccgcctctcccgcgcc 20143360
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 172 bits (87), Expect = 9e-40 Identities = 108/115 (93%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgttga 372 |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| || || Sbjct: 116830 ggaggagaggaaggcgcagaagagctactgggaggagcactccaaggacctcaccgtcga 116889 Query: 373 ggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgag 427 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 116890 ggccatgatgctcgactcccgcgccgccgatctcgacaaggaggagcgccccgag 116944 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Plus Query: 426 agatactgtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaa 485 ||||| |||||||||||||| | || |||||||||||||| ||||| ||||| || |||| Sbjct: 118146 agatattgtctttacttcctccttacgaaggaaaatcagtactggaacttggtgctggaa 118205 Query: 486 taggtcgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttca 545 |||||||||| ||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 118206 taggtcgcttcactggagaactagtgaaaacagctgggcatgttcttgcaatggatttca 118265 Query: 546 ttggaagtgtgattaa 561 ||| |||||||||||| Sbjct: 118266 ttgaaagtgtgattaa 118281 Score = 127 bits (64), Expect = 5e-26 Identities = 97/108 (89%) Strand = Plus / Plus Query: 63 cgtgatcccgtcgtggatgcagccgcgtgggaggtcgttcaaccgccgctcccgcagctt 122 |||||||| || |||||||||||| |||||| | || ||||||||||||||||| ||||| Sbjct: 116380 cgtgatccggtggtggatgcagcctcgtgggcgatccttcaaccgccgctcccggagctt 116439 Query: 123 ctcccgcgcccgcctcgccgtcgagggatcctaatctcgcccgcctcc 170 ||||||||||||||||||| ||||||| || |||||||||| |||||| Sbjct: 116440 ctcccgcgcccgcctcgccatcgaggggtcttaatctcgccggcctcc 116487 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 564 agaatgaaagcataaatggccattacgaaaatgcatccttcatgtgtgctgatgt 618 |||||||||||||||| || || || | ||||||||||| |||||||| ||||| Sbjct: 118429 agaatgaaagcataaacggtcaccacaagaatgcatcctttatgtgtgcggatgt 118483
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 147 bits (74), Expect = 5e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgt 369 ||||| ||||||| |||||||| ||| ||||||||||||||||||| ||||||||| || Sbjct: 18137 ggaggtggagaggaaggcgcagcggagctactgggaggagcactccaaggacctcaccgt 18078 Query: 370 tgaggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgag 427 ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 18077 cgaggccatgatgctcgactcccgcgccgccgacctcgacaaggaggagcgccccgag 18020 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 431 ctgtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaataggt 490 |||||| |||| ||||| || |||| |||||||| ||||||||||| || |||||||| Sbjct: 17131 ctgtctgtactcccttcttacaaagggaaatcagtactggagcttggtgctggaatagga 17072 Query: 491 cgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcattgga 550 ||||||||||| |||||||| || |||||| |||||| | || | || ||||||| | Sbjct: 17071 cgctttactggggaactggcaaaagaagctggccatgttttagccctagacttcattgaa 17012 Query: 551 agtgtgattaa 561 ||||||||||| Sbjct: 17011 agtgtgattaa 17001 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 102 caaccgccgctcccgcagcttctcccgcgcccgcctcgccgtcgaggg 149 |||||||||||||||| |||||||||| |||||| |||||||||||| Sbjct: 18466 caaccgccgctcccgcggcttctcccgatcccgccgcgccgtcgaggg 18419
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 147 bits (74), Expect = 5e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgt 369 ||||| ||||||| |||||||| ||| ||||||||||||||||||| ||||||||| || Sbjct: 43978 ggaggtggagaggaaggcgcagcggagctactgggaggagcactccaaggacctcaccgt 43919 Query: 370 tgaggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgag 427 ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 43918 cgaggccatgatgctcgactcccgcgccgccgacctcgacaaggaggagcgccccgag 43861 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 431 ctgtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaataggt 490 |||||| |||| ||||| || |||| |||||||| ||||||||||| || |||||||| Sbjct: 42972 ctgtctgtactcccttcttacaaagggaaatcagtactggagcttggtgctggaatagga 42913 Query: 491 cgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcattgga 550 ||||||||||| |||||||| || |||||| |||||| | || | || ||||||| | Sbjct: 42912 cgctttactggggaactggcaaaagaagctggccatgttttagccctagacttcattgaa 42853 Query: 551 agtgtgattaa 561 ||||||||||| Sbjct: 42852 agtgtgattaa 42842 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 102 caaccgccgctcccgcagcttctcccgcgcccgcctcgccgtcgaggg 149 |||||||||||||||| |||||||||| |||||| |||||||||||| Sbjct: 44307 caaccgccgctcccgcggcttctcccgatcccgccgcgccgtcgaggg 44260
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 147 bits (74), Expect = 5e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgcagaagaggtactgggaggagcactccagggacctcactgt 369 ||||| ||||||| |||||||| ||| ||||||||||||||||||| ||||||||| || Sbjct: 27011555 ggaggtggagaggaaggcgcagcggagctactgggaggagcactccaaggacctcaccgt 27011496 Query: 370 tgaggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgccccgag 427 ||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 27011495 cgaggccatgatgctcgactcccgcgccgccgacctcgacaaggaggagcgccccgag 27011438 Score = 77.8 bits (39), Expect = 4e-11 Identities = 108/131 (82%) Strand = Plus / Minus Query: 431 ctgtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcgggaataggt 490 |||||| |||| ||||| || |||| |||||||| ||||||||||| || |||||||| Sbjct: 27010549 ctgtctgtactcccttcttacaaagggaaatcagtactggagcttggtgctggaatagga 27010490 Query: 491 cgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcattgga 550 ||||||||||| |||||||| || |||||| |||||| | || | || ||||||| | Sbjct: 27010489 cgctttactggggaactggcaaaagaagctggccatgttttagccctagacttcattgaa 27010430 Query: 551 agtgtgattaa 561 ||||||||||| Sbjct: 27010429 agtgtgattaa 27010419 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 102 caaccgccgctcccgcagcttctcccgcgcccgcctcgccgtcgaggg 149 |||||||||||||||| |||||||||| |||||| |||||||||||| Sbjct: 27011884 caaccgccgctcccgcggcttctcccgatcccgccgcgccgtcgaggg 27011837
>gb|AY065971.1| Triticum aestivum phosphoethanolamine methyltransferase mRNA, complete cds Length = 1782 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 328 gcagaagaggtactgggaggagcactccagggacctcactgttgaggccatgatgctcga 387 ||||||||| ||||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 104 gcagaagagctactgggaggagcactccaaggacctcaccgtggagtccatgatgctcga 163 Query: 388 ctcccgtgccgccgatctggacaaggaggag 418 |||||| ||| || || |||||||||||| Sbjct: 164 ctcccgcgccaaggacctcgacaaggaggag 194
>gb|AY319479.1| Brassica napus phosphoethanolamine N-methyltransferase mRNA, complete cds Length = 1750 Score = 69.9 bits (35), Expect = 9e-09 Identities = 119/147 (80%) Strand = Plus / Plus Query: 365 actgttgaggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcgcccc 424 |||||||| || |||||||||||||| ||||| || ||||| |||||||| || ||||| Sbjct: 317 actgttgaagctatgatgctcgactctcgtgctgctgatctcgacaaggaagaacgccct 376 Query: 425 gagatactgtctttacttccttcatatgaaggaaaatcagtgctggagcttggcgcggga 484 ||| | || ||||| ||||| | || ||||| || || |||||||||||||| || || Sbjct: 377 gaggtgctctctttgcttccaccctacgaaggcaagtcggtgctggagcttggagctggt 436 Query: 485 ataggtcgctttactggagaactggct 511 || ||||| || ||||| ||| ||||| Sbjct: 437 attggtcgtttcactggtgaattggct 463
>dbj|AB196771.1| Atriplex nummularia AnPEAMT mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 1989 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 488 ggtcgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcatt 547 ||||| |||||||| ||| |||| ||| |||||| || ||| |||| ||||||||||| Sbjct: 474 ggtcgttttactggtgaattggccgagaaagctggacaggttattgctctggatttcatt 533 Query: 548 ggaagtgtgattaaaaagaatgaaagcataaatggccattacgaaaatg 596 | ||||| || || ||||||||| |||||||||| |||||| |||||| Sbjct: 534 gagagtgttataaagaagaatgaatgcataaatgggcattacaaaaatg 582
>gb|AF237633.1|AF237633 Spinacia oleracea phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 2252 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 537 tggatttcattggaagtgtgattaaaaagaatgaaagcataaatggccattacgaaaatg 596 |||||||||||| ||||| || || |||||||||||||||||||| |||||| |||||| Sbjct: 504 tggatttcattgagagtgttataaagaagaatgaaagcataaatgggcattacaaaaatg 563
>emb|AJ234432.1|HVU234432 Hordeum vulgare partial mRNA; clone cMWG0706 Length = 724 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 361 cctcactgttgaggccatgatgctcgactcccgtgccgccgatctggacaaggaggagcg 420 |||||| || ||| ||||||||||||||||||| ||| || || |||||||||||||| Sbjct: 3 cctcaccgtcgagtccatgatgctcgactcccgcgccaaggacctcgacaaggaggagcg 62 Query: 421 ccc 423 ||| Sbjct: 63 ccc 65
>gb|BT014099.1| Lycopersicon esculentum clone 133203F, mRNA sequence Length = 1992 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 362 ctcactgttgaggccatgatgctcgactc 390 |||||||| |||||||||||||||||||| Sbjct: 398 ctcactgtcgaggccatgatgctcgactc 426
>gb|AF328858.1|AF328858 Lycopersicon esculentum phosphoethanolamine N-methyltransferase mRNA, complete cds Length = 1794 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 362 ctcactgttgaggccatgatgctcgactc 390 |||||||| |||||||||||||||||||| Sbjct: 172 ctcactgtcgaggccatgatgctcgactc 200
>dbj|AB090883.1| Aster tripolium mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 1870 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 539 gatttcattggaagtgtgattaaaaagaatgaaagcataaa 579 |||||||||| ||||||| | ||||||||||| |||||||| Sbjct: 437 gatttcattgaaagtgtggtaaaaaagaatgagagcataaa 477
>dbj|AB221008.1| Beta vulgaris BvPEAMT1 mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 2030 Score = 46.1 bits (23), Expect = 0.14 Identities = 104/131 (79%) Strand = Plus / Plus Query: 488 ggtcgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcatt 547 ||||| |||||||| || |||| |||| |||||| || || |||| ||||||||||| Sbjct: 471 ggtcgttttactggtgatttggccaagaaagctggccaggtgattgctctggatttcatt 530 Query: 548 ggaagtgtgattaaaaagaatgaaagcataaatggccattacgaaaatgcatccttcatg 607 | |||| || || ||||||||| || ||||||| |||||| |||||| |||||| Sbjct: 531 gagagtgctataaagaagaatgaatgcgtaaatgggcattacaaaaatgtgaagttcatg 590 Query: 608 tgtgctgatgt 618 ||||||||||| Sbjct: 591 tgtgctgatgt 601
>gb|U87316.1|MEU87316 Methylobacterium extorquens putative glycerate kinase and pyruvate kinase (pykA) genes, complete cds Length = 7883 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 32 tccgcgctcctccccctccccgc 54 ||||||||||||||||||||||| Sbjct: 3252 tccgcgctcctccccctccccgc 3274
>gb|AY819649.1| Eimeria tenella 5401 antigen mRNA, partial cds Length = 864 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 ggggtgctggcgaagctggagg 314 |||||||||||||||||||||| Sbjct: 149 ggggtgctggcgaagctggagg 170
>ref|NM_019622.1| Rattus norvegicus espin (Espn), mRNA Length = 2786 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 2356 gaagctggaggaggagagggag 2377
>ref|XM_425734.1| PREDICTED: Gallus gallus similar to putative sweet taste receptor T1R1 (LOC428176), mRNA Length = 2286 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 33 gaagctggaggaggagagggag 54
>ref|XM_417532.1| PREDICTED: Gallus gallus espin (LOC395461), mRNA Length = 1343 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1219 gaagctggaggaggagagggag 1240
>gb|BC044723.1| Mus musculus espin, transcript variant 6, mRNA (cDNA clone IMAGE:6395900), complete cds Length = 1134 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 704 gaagctggaggaggagagggag 725
>gb|AY587571.1| Mus musculus espin isoform 3B mRNA, complete cds, alternatively spliced Length = 985 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 811 gaagctggaggaggagagggag 832
>gb|AY587570.1| Mus musculus espin isoform 3A mRNA, complete cds, alternatively spliced Length = 895 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 721 gaagctggaggaggagagggag 742
>gb|AY587569.1| Rattus norvegicus espin isoform 3B mRNA, complete cds, alternatively spliced Length = 985 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 811 gaagctggaggaggagagggag 832
>gb|AY587568.1| Rattus norvegicus espin isoform 3A mRNA, complete cds, alternatively spliced Length = 895 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 721 gaagctggaggaggagagggag 742
>ref|NM_019585.2| Mus musculus espin (Espn), transcript variant 6, mRNA Length = 1134 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 704 gaagctggaggaggagagggag 725
>ref|NM_207690.1| Mus musculus espin (Espn), transcript variant 5, mRNA Length = 1642 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1201 gaagctggaggaggagagggag 1222
>ref|NM_207691.1| Mus musculus espin (Espn), transcript variant 3, mRNA Length = 1885 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1444 gaagctggaggaggagagggag 1465
>ref|NM_207689.1| Mus musculus espin (Espn), transcript variant 4, mRNA Length = 1669 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1228 gaagctggaggaggagagggag 1249
>ref|NM_207687.1| Mus musculus espin (Espn), transcript variant 1, mRNA Length = 2883 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 2442 gaagctggaggaggagagggag 2463
>ref|NM_207688.1| Mus musculus espin (Espn), transcript variant 2, mRNA Length = 1912 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1471 gaagctggaggaggagagggag 1492
>emb|AJ306453.1|ETE306453 Eimeria tenella mRNA for microneme protein 4 (mic4 gene) Length = 7053 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 ggggtgctggcgaagctggagg 314 |||||||||||||||||||||| Sbjct: 5855 ggggtgctggcgaagctggagg 5876
>emb|BX511123.10| Zebrafish DNA sequence from clone DKEY-201I6 in linkage group 16, complete sequence Length = 159464 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 448 atatgaaggaaaatcagtgctg 469 |||||||||||||||||||||| Sbjct: 18856 atatgaaggaaaatcagtgctg 18835
>dbj|AK146701.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920043M05 product:espin, full insert sequence Length = 1693 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 946 gaagctggaggaggagagggag 967
>dbj|AK165010.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130202O15 product:espin, full insert sequence Length = 2366 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1953 gaagctggaggaggagagggag 1974
>dbj|AK002284.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610007F01 product:espin, full insert sequence Length = 1075 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 665 gaagctggaggaggagagggag 686
>gb|AF540949.1| Rattus norvegicus Purkinje cell espin isoform 2+ mRNA, complete cds; alternatively spliced Length = 1335 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1161 gaagctggaggaggagagggag 1182
>gb|AF540948.1| Rattus norvegicus Purkinje cell espin isoform 2 mRNA, complete cds; alternatively spliced Length = 1308 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1134 gaagctggaggaggagagggag 1155
>gb|AF540947.1| Rattus norvegicus Purkinje cell espin isoform 1+ mRNA, complete cds; alternatively spliced Length = 1563 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1389 gaagctggaggaggagagggag 1410
>gb|AF540946.1| Rattus norvegicus Purkinje cell espin isoform 1 mRNA, complete cds; alternatively spliced Length = 1536 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1362 gaagctggaggaggagagggag 1383
>gb|AF540945.1| Mus musculus Purkinje cell espin isoform 2+ (Espn) mRNA, complete cds; alternatively spliced Length = 1402 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1228 gaagctggaggaggagagggag 1249
>gb|AF540944.1| Mus musculus Purkinje cell espin isoform 2 (Espn) mRNA, complete cds; alternatively spliced Length = 1375 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1201 gaagctggaggaggagagggag 1222
>gb|AF540943.1| Mus musculus Purkinje cell espin isoform 1+ (Espn) mRNA, complete cds; alternatively spliced Length = 1645 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1471 gaagctggaggaggagagggag 1492
>gb|AF540942.1| Mus musculus Purkinje cell espin isoform 1 (Espn) mRNA, complete cds; alternatively spliced Length = 1618 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 1444 gaagctggaggaggagagggag 1465
>gb|AF239886.1|AF239886 Mus musculus espin mRNA, complete cds Length = 2616 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 2442 gaagctggaggaggagagggag 2463
>gb|AF239885.1|AF239885 Gallus gallus espin mRNA, partial cds Length = 1222 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 630 gaagctggaggaggagagggag 651
>emb|BX119921.9| Zebrafish DNA sequence from clone CH211-198N10 in linkage group 16, complete sequence Length = 126091 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 448 atatgaaggaaaatcagtgctg 469 |||||||||||||||||||||| Sbjct: 55698 atatgaaggaaaatcagtgctg 55719
>gb|BC057888.1| Mus musculus espin, transcript variant 6, mRNA (cDNA clone IMAGE:4982096), complete cds Length = 1091 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 650 gaagctggaggaggagagggag 671
>gb|AF134857.1|AF134857 Mus musculus espin mRNA, partial cds Length = 333 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 177 gaagctggaggaggagagggag 198
>gb|AF076856.1|AF076856 Rattus norvegicus small espin mRNA, complete cds Length = 1080 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 650 gaagctggaggaggagagggag 671
>gb|U46007.1|RNU46007 Rattus norvegicus espin mRNA, complete cds Length = 2786 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagagggag 325 |||||||||||||||||||||| Sbjct: 2356 gaagctggaggaggagagggag 2377
>ref|NM_121215.3| Arabidopsis thaliana NADH dehydrogenase (ubiquinone) AT5G11770 mRNA, complete cds Length = 1070 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 121 tggaggaggagagggaggcgc 101
>gb|DQ214384.1| Taeniopygia guttata clone 0058P0001C07 solution structure of the Bola-like protein chain A variant 3-like mRNA, complete sequence Length = 453 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gccgctcccgcagcttctccc 127 ||||||||||||||||||||| Sbjct: 21 gccgctcccgcagcttctccc 1
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 ccactcgtccgcgctcctccccctc 49 |||| |||||||||||||||||||| Sbjct: 385672 ccacccgtccgcgctcctccccctc 385696
>gb|AY738117.1| Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) (MMP2) gene, complete cds Length = 31017 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 555 tgattaaaaagaatgaaagca 575 ||||||||||||||||||||| Sbjct: 13466 tgattaaaaagaatgaaagca 13446
>gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, complete sequence Length = 217156 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 ggagagggaggcgcagaagag 336 ||||||||||||||||||||| Sbjct: 96592 ggagagggaggcgcagaagag 96612
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 105 ccgccgctcccgcagcttctcccgcgccc 133 ||||||||||||| ||||| ||||||||| Sbjct: 148408 ccgccgctcccgccgcttcgcccgcgccc 148380
>ref|XM_572437.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH02610) partial mRNA Length = 2276 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 ccactcgtccgcgctcctccccctc 49 |||| |||||||||||||||||||| Sbjct: 87 ccacccgtccgcgctcctccccctc 111
>gb|AY056182.1| Arabidopsis thaliana putative NADH dehydrogenase (ubiquinone) (At5g11770) mRNA, complete cds Length = 950 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 122 tggaggaggagagggaggcgc 102
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 120 cttctcccgcgcccgcctcgccgtcgagg 148 |||| |||||||||||||||||| ||||| Sbjct: 33998 cttcgcccgcgcccgcctcgccgacgagg 33970
>emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P22 (ESSA project) Length = 93205 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 71862 tggaggaggagagggaggcgc 71882
>gb|AY128912.1| Arabidopsis thaliana NADH dehydrogenase / ubiquinone (At5g11770) mRNA, complete cds Length = 737 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 50 tggaggaggagagggaggcgc 30
>gb|AY099848.1| Arabidopsis thaliana NADH dehydrogenase / ubiquinone (At5g11770) mRNA, complete cds Length = 954 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 116 tggaggaggagagggaggcgc 96
>gb|AC092352.2| Homo sapiens chromosome 16 clone RP11-2M17, complete sequence Length = 176117 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 tgattaaaaagaatgaaagca 575 ||||||||||||||||||||| Sbjct: 45719 tgattaaaaagaatgaaagca 45739
>gb|AF428300.1|AF428300 Arabidopsis thaliana AT5g11770/T22P22_160 mRNA, complete cds Length = 1039 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 121 tggaggaggagagggaggcgc 101
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 105 ccgccgctcccgcagcttctcccgcgccc 133 ||||||||||||| ||||| ||||||||| Sbjct: 15155444 ccgccgctcccgccgcttcgcccgcgccc 15155416
>emb|BX833732.1|CNS0A1ZR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZC01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 870 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 99 tggaggaggagagggaggcgc 79
>emb|BX832695.1|CNS0A0ZX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH90ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1049 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 101 tggaggaggagagggaggcgc 81
>emb|BX831393.1|CNS0A0OP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 881 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 99 tggaggaggagagggaggcgc 79
>gb|AC007336.6| Homo sapiens chromosome 16 clone RP11-212I21, complete sequence Length = 193963 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 555 tgattaaaaagaatgaaagca 575 ||||||||||||||||||||| Sbjct: 106142 tgattaaaaagaatgaaagca 106122
>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702D12 Length = 137332 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 ccgccgctcccgcagcttctcccgcgccc 133 |||||||||||||||| || ||||||||| Sbjct: 44852 ccgccgctcccgcagcctcgcccgcgccc 44880
>gb|AY085120.1| Arabidopsis thaliana clone 13161 mRNA, complete sequence Length = 937 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 99 tggaggaggagagggaggcgc 79
>emb|X96679.1|ATPSST A.thaliana PSST gene Length = 1855 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 1758 tggaggaggagagggaggcgc 1738
>emb|X84078.1|ATNADHUO A.thaliana mRNA for NADH:ubiquinone oxidoreductase (complex I) Length = 951 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tggaggaggagagggaggcgc 329 ||||||||||||||||||||| Sbjct: 92 tggaggaggagagggaggcgc 72
>gb|AC147616.3| Mus musculus BAC clone RP23-433L22 from 8, complete sequence Length = 182152 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 tcctccccctccccgcagccc 59 ||||||||||||||||||||| Sbjct: 145418 tcctccccctccccgcagccc 145398
>dbj|AB080186.1| Suaeda japonica PEAMT mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 1779 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 488 ggtcgctttactggagaactggctaagacagctgggcatgttcttgcaatggatttcatt 547 ||||| |||||||| ||| ||||| ||| |||||| || ||| |||| ||||||||||| Sbjct: 316 ggtcgttttactggtgaattggctgagaaagctggccaggttattgctctggatttcatt 375 Query: 548 g 548 | Sbjct: 376 g 376
>gb|AC139846.4| Mus musculus BAC clone RP23-385F3 from 8, complete sequence Length = 191571 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 tcctccccctccccgcagccc 59 ||||||||||||||||||||| Sbjct: 17188 tcctccccctccccgcagccc 17168
>gb|AC163661.4| Mus musculus BAC clone RP23-288B18 from chromosome 10, complete sequence Length = 210846 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggctaagacagctgggcatg 527 |||||||||||||||||||| Sbjct: 104803 ggctaagacagctgggcatg 104822
>ref|XM_507693.1| PREDICTED: Pan troglodytes similar to FLJ00409 protein (LOC450349), mRNA Length = 2973 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gctggaggaggagagggagg 326 |||||||||||||||||||| Sbjct: 2363 gctggaggaggagagggagg 2382
>ref|NM_190609.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 12 ggaggaggagagggaggcgc 31
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tgctggcgaagctggaggag 316 |||||||||||||||||||| Sbjct: 3326867 tgctggcgaagctggaggag 3326886
>gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, complete sequence Length = 204724 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tgctggcgaagctggaggag 316 |||||||||||||||||||| Sbjct: 183763 tgctggcgaagctggaggag 183782
>gb|AC147611.1| Pan troglodytes BAC clone RP43-115B5 from 7, complete sequence Length = 172956 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 538 ggatttcattggaagtgtgattaa 561 ||||||||||||||||| |||||| Sbjct: 136804 ggatttcattggaagtgggattaa 136827
>gb|AY458643.1| Uncultured bacterium 561 clone EBAC000-47H08 genomic sequence Length = 63692 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 293 ggggtgctggcgaagctggaggaggaga 320 ||||||||||||||||| || ||||||| Sbjct: 57826 ggggtgctggcgaagctcgaagaggaga 57799
>ref|XM_742300.1| Aspergillus fumigatus Af293 pectate lyase (Afu8g05910) partial mRNA Length = 765 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 gaggaggagagggaggcgcagaagaggt 338 |||||||||||||||| | ||||||||| Sbjct: 36 gaggaggagagggaggagaagaagaggt 9
>gb|AC121926.3| Mus musculus BAC clone RP24-202B3 from chromosome 10, complete sequence Length = 185398 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 ggctaagacagctgggcatg 527 |||||||||||||||||||| Sbjct: 30554 ggctaagacagctgggcatg 30573
>gb|AC006003.4| Homo sapiens PAC clone RP4-782K24 from 7, complete sequence Length = 123255 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgcagaagagg 337 ||||||||||||||||||| || ||||| Sbjct: 79200 ggaggaggagagggaggcggaggagagg 79173
>gb|AC138199.22| Medicago truncatula clone mth2-15g10, complete sequence Length = 109479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 tcatatgaaggaaaatcagt 465 |||||||||||||||||||| Sbjct: 74753 tcatatgaaggaaaatcagt 74772
>emb|AL606753.12| Human DNA sequence from clone RP11-2P2 on chromosome 1 Contains the 5' end of the PLXNA2 gene for plexin A2 and a heterogeneous nuclear ribonucleoprotein D-like (HNRPDL) pseudogene, complete sequence Length = 66984 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 gcttctcccgcgcccgcctc 138 |||||||||||||||||||| Sbjct: 24049 gcttctcccgcgcccgcctc 24030
>emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chromosome 1 Contains a novel gene, the LHX9 gene for LIM homeobox 9 and a CpG island, complete sequence Length = 182527 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 agctggaggaggagagggag 325 |||||||||||||||||||| Sbjct: 136129 agctggaggaggagagggag 136110
>emb|AL513128.11| Human DNA sequence from clone RP11-301N24 on chromosome 10 Contains the 3' end of the SPAG6 gene for sperm associated antigen 6 (pf16, MGC26276, Repro-SA-1,DKFZp434I153), the 3' end of a novel gene, the 3' end of the PIP5K2A gene for phosphatidylinositol-4-phosphate 5-kinase type II alpha and two CpG islands, complete sequence Length = 184685 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gctggaggaggagagggagg 326 |||||||||||||||||||| Sbjct: 161574 gctggaggaggagagggagg 161555
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ctcccgcgcccgcctcgccg 142 |||||||||||||||||||| Sbjct: 498321 ctcccgcgcccgcctcgccg 498302
>emb|AL391601.6| Human DNA sequence from clone RP11-551D9 on chromosome 13, complete sequence Length = 145871 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 attaaaaagaatgaaagcat 576 |||||||||||||||||||| Sbjct: 135670 attaaaaagaatgaaagcat 135689
>emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chromosome 9 Contains the 5'end of the protein tyrosine phosphatase (non-receptor type 3) gene, a novel pseudogene, apseudogene similar to mouse Ybox transcription factor and a CpG island, complete sequence Length = 189367 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 cagaagaggtactgggaggagcac 352 ||||||||||| |||||||||||| Sbjct: 55824 cagaagaggtagtgggaggagcac 55801
>gb|AC100801.4| Homo sapiens chromosome 8, clone CTA-392E5, complete sequence Length = 111708 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 ttaaaaagaatgaaagcata 577 |||||||||||||||||||| Sbjct: 68497 ttaaaaagaatgaaagcata 68478
>emb|Z48169.1|YEINVAFLX Y.enterocolitica invA gene and flagellar gene cluster Length = 9971 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 gcataaatggccattacgaa 592 |||||||||||||||||||| Sbjct: 9824 gcataaatggccattacgaa 9843
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 gtgattaaaaagaatgaaag 573 |||||||||||||||||||| Sbjct: 1873603 gtgattaaaaagaatgaaag 1873622
>emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0078D11, complete sequence Length = 115006 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 78063 ggaggaggagagggaggcgc 78082
>gb|BC048978.1| Homo sapiens cDNA clone IMAGE:4830713 Length = 2425 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ctcgtccgcgctcctccccc 47 |||||||||||||||||||| Sbjct: 3 ctcgtccgcgctcctccccc 22
>gb|BC035168.1| Homo sapiens cDNA clone IMAGE:5265732 Length = 3155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctcgtccgcgctcctccccc 47 |||||||||||||||||||| Sbjct: 269 ctcgtccgcgctcctccccc 250
>gb|AC090424.18| Homo sapiens 12q BAC RP11-428I12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158472 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctccccctccccgcagcccc 60 |||||||||||||||||||| Sbjct: 18202 ctccccctccccgcagcccc 18183
>gb|AC008481.9| Homo sapiens chromosome 19 clone CTC-398G3, complete sequence Length = 142645 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cctccccctccccgcagccc 59 |||||||||||||||||||| Sbjct: 63952 cctccccctccccgcagccc 63971
>dbj|AK131325.1| Homo sapiens cDNA FLJ16327 fis, clone SYNOV1000256, weakly similar to Human preferentially expressed antigen of melanoma (PRAME) mRNA Length = 3038 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagaggg 323 |||||||||||||||||||| Sbjct: 383 gaagctggaggaggagaggg 402
>gb|AC008180.15| Homo sapiens 3 BAC RP11-292L5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193035 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 agctggaggaggagagggag 325 |||||||||||||||||||| Sbjct: 71572 agctggaggaggagagggag 71553
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ccgcgcccgcctcgccgtcg 145 |||||||||||||||||||| Sbjct: 1991919 ccgcgcccgcctcgccgtcg 1991900
>gb|AC091020.10| Homo sapiens chromosome 18, clone RP11-701C7, complete sequence Length = 184164 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aagctggaggaggagaggga 324 |||||||||||||||||||| Sbjct: 31854 aagctggaggaggagaggga 31835
>gb|AC011804.6| Homo sapiens chromosome 18, clone RP11-71F23, complete sequence Length = 205174 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aagctggaggaggagaggga 324 |||||||||||||||||||| Sbjct: 65835 aagctggaggaggagaggga 65816
>ref|XM_938244.1| PREDICTED: Homo sapiens similar to leucine rich repeat containing 14 (LOC649179), mRNA Length = 3027 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gaagctggaggaggagaggg 323 |||||||||||||||||||| Sbjct: 377 gaagctggaggaggagaggg 396
>ref|XM_944370.1| PREDICTED: Homo sapiens hypothetical LOC440092 (LOC440092), mRNA Length = 3572 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctcgtccgcgctcctccccc 47 |||||||||||||||||||| Sbjct: 695 ctcgtccgcgctcctccccc 676
>ref|XM_498540.2| PREDICTED: Homo sapiens hypothetical LOC440092 (LOC440092), mRNA Length = 3572 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ctcgtccgcgctcctccccc 47 |||||||||||||||||||| Sbjct: 695 ctcgtccgcgctcctccccc 676
>gb|AF368464.1|AF368464 Homo sapiens carboxypeptidase M gene, exons 1 and 2 and partial cds Length = 353 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 107 ggaggaggagagggaggcgc 126
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 28191626 ggaggaggagagggaggcgc 28191645
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 25331906 ggaggaggagagggaggcgc 25331925
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ctcccgcgcccgcctcgccg 142 |||||||||||||||||||| Sbjct: 13137771 ctcccgcgcccgcctcgccg 13137790
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcaga 332 |||||||||||||||||||| Sbjct: 22771496 ggaggagagggaggcgcaga 22771515
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 7689439 ggaggaggagagggaggcgc 7689420
>emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chromosome 2, complete sequence Length = 163063 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 553 tgtgattaaaaagaatgaaa 572 |||||||||||||||||||| Sbjct: 79743 tgtgattaaaaagaatgaaa 79762
>gb|AC093725.3| Homo sapiens BAC clone RP11-4O3 from 4, complete sequence Length = 163796 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 aaagaatgaaagcataaatg 581 |||||||||||||||||||| Sbjct: 103552 aaagaatgaaagcataaatg 103533
>gb|AC068599.5| Homo sapiens BAC clone RP11-549J11 from 2, complete sequence Length = 144228 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 acttccttcatatgaaggaa 458 |||||||||||||||||||| Sbjct: 90790 acttccttcatatgaaggaa 90771
>gb|AC154850.2| Mus musculus BAC clone RP23-36B4 from chromosome 9, complete sequence Length = 247708 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tgctggcgaagctggaggag 316 |||||||||||||||||||| Sbjct: 233327 tgctggcgaagctggaggag 233308
>gb|AC022079.16|AC022079 Homo sapiens 12 BAC RP11-425D17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181193 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ctcgtccgcgctcctccccc 47 |||||||||||||||||||| Sbjct: 174389 ctcgtccgcgctcctccccc 174408
>dbj|AB154532.1| Cucumis melo 7G07 mRNA for hypothetical protein, partial cds Length = 685 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 518 gctgggcatgttcttgcaatggatttcattggaagtgtgattaaaaagaatgaaag 573 |||||||| ||||| ||| |||| ||||| | |||||||| || ||||||||||| Sbjct: 292 gctgggcaggttctggcattggacttcatcgagagtgtgatcaagaagaatgaaag 347
>gb|AF206725.6| Homo sapiens chromosome 8 clone CTA-392E5 map q21-q23, complete sequence Length = 111702 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 ttaaaaagaatgaaagcata 577 |||||||||||||||||||| Sbjct: 43207 ttaaaaagaatgaaagcata 43226
>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0051H17 Length = 187471 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 105 ccgccgctcccgcagcttctcccgcgcc 132 ||||||||||||| || ||||||||||| Sbjct: 49711 ccgccgctcccgccgcctctcccgcgcc 49738
>gb|AC092093.34| Mus musculus strain C57BL/6J chromosome 10 clone rp23-168o8, complete sequence Length = 200124 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgcagaagagg 337 ||||||||||||||||| |||| ||||| Sbjct: 114362 ggaggaggagagggaggagcaggagagg 114389
>gb|AC025423.32| Homo sapiens 12 BAC RP11-611O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 16403 ggaggaggagagggaggcgc 16422
>gb|AC102797.5| Homo sapiens chromosome 18, clone RP11-157P23, complete sequence Length = 179632 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 aagctggaggaggagaggga 324 |||||||||||||||||||| Sbjct: 47089 aagctggaggaggagaggga 47108
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 134804 ggaggaggagagggaggcgc 134785
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 25704 ggaggaggagagggaggcgc 25685
>emb|BX322604.9| Zebrafish DNA sequence from clone DKEY-10N19 in linkage group 5, complete sequence Length = 175983 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 agctggaggaggagagggag 325 |||||||||||||||||||| Sbjct: 65877 agctggaggaggagagggag 65896
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ctcccgcgcccgcctcgccg 142 |||||||||||||||||||| Sbjct: 59861 ctcccgcgcccgcctcgccg 59880
>gb|AC151357.2| Xenopus tropicalis clone ISB-60L11, complete sequence Length = 108609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 aaaaagaatgaaagcataaa 579 |||||||||||||||||||| Sbjct: 5986 aaaaagaatgaaagcataaa 6005
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcaga 332 |||||||||||||||||||| Sbjct: 98138 ggaggagagggaggcgcaga 98157
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ggaggagagggaggcgcaga 332 |||||||||||||||||||| Sbjct: 140290 ggaggagagggaggcgcaga 140309
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cgcagcttctcccgcgcccg 134 |||||||||||||||||||| Sbjct: 1503368 cgcagcttctcccgcgcccg 1503349
>emb|CR942541.1| Xenopus tropicalis finished cDNA, clone TEgg109a17 Length = 2488 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccgccgctcccgcagcttctcccg 128 |||||||||| ||||||||||||| Sbjct: 43 ccgccgctccagcagcttctcccg 20
>emb|BX629356.1|CNS09SBW Tetraodon nigroviridis BAC sequence Length = 101385 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 15 cacacccgctccactcgtccgcgctcctccccctcc 50 |||||||||||| |||||||| ||||||| ||||| Sbjct: 34831 cacacccgctcctgtcgtccgccctcctccgcctcc 34866
>gb|BC089413.1| Homo sapiens cDNA clone MGC:104998 IMAGE:3059293, complete cds Length = 880 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gaagctggaggaggagaggg 323 |||||||||||||||||||| Sbjct: 43 gaagctggaggaggagaggg 24
>gb|AC113471.9| Mus musculus chromosome 7, clone RP23-268E17, complete sequence Length = 200878 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 560 aaaaagaatgaaagcataaatggc 583 ||||| |||||||||||||||||| Sbjct: 161940 aaaaaaaatgaaagcataaatggc 161963
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 25260082 ggaggaggagagggaggcgc 25260101
>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158927 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggaggaggagagggaggcgc 329 |||||||||||||||||||| Sbjct: 5284 ggaggaggagagggaggcgc 5265
>emb|CT030739.10| Mouse DNA sequence from clone RP24-496K8 on chromosome 13, complete sequence Length = 192075 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 cgaagctggaggaggagagggagg 326 |||||| ||||||||||||||||| Sbjct: 141773 cgaagcaggaggaggagagggagg 141750
>gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, complete sequence Length = 173965 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gctggaggaggagagggagg 326 |||||||||||||||||||| Sbjct: 80310 gctggaggaggagagggagg 80291
>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22 Length = 909203 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gaagctggaggaggagaggg 323 |||||||||||||||||||| Sbjct: 4493 gaagctggaggaggagaggg 4474
>emb|AL929534.12| Mouse DNA sequence from clone RP23-275L13 on chromosome 2, complete sequence Length = 190466 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 557 attaaaaagaatgaaagcataaat 580 |||||||||||||||| ||||||| Sbjct: 88268 attaaaaagaatgaaatcataaat 88291
>emb|BX005293.8| Mouse DNA sequence from clone RP23-53B21 on chromosome 4, complete sequence Length = 27935 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 gaaaatgcatccttcatgtg 609 |||||||||||||||||||| Sbjct: 18402 gaaaatgcatccttcatgtg 18421
>gb|AC091764.35| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202b12, complete sequence Length = 230848 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 310 ggaggaggagagggaggcgcagaagagg 337 ||||||||||||||||| |||| ||||| Sbjct: 23012 ggaggaggagagggaggagcaggagagg 23039
>dbj|D11023.1|HUMPINL Homo sapiens gene for immunoglobulin light chain Length = 650 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gaagctggaggaggagaggg 323 |||||||||||||||||||| Sbjct: 140 gaagctggaggaggagaggg 121
>dbj|D86993.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:23C6 Length = 39752 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gaagctggaggaggagaggg 323 |||||||||||||||||||| Sbjct: 11652 gaagctggaggaggagaggg 11633 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,178,533 Number of Sequences: 3902068 Number of extensions: 5178533 Number of successful extensions: 189232 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 187913 Number of HSP's gapped (non-prelim): 1314 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
