ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal11m15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK068519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
2ref|XM_469743.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 131 3e-27
4gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genom... 131 3e-27
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
6gb|BT009098.1| Triticum aestivum clone wkm2c.pk006.d11:fis, full... 98 4e-17
7ref|XM_424398.1| PREDICTED: Gallus gallus similar to hypothetica... 46 0.12
8emb|BX469889.7| Zebrafish DNA sequence from clone DKEY-156P3 in ... 44 0.47
9ref|XM_703913.1| PREDICTED: Danio rerio similar to Si:ch211-238n... 44 0.47
10ref|XM_703912.1| PREDICTED: Danio rerio similar to Si:ch211-238n... 44 0.47
11ref|XM_703911.1| PREDICTED: Danio rerio similar to Si:ch211-238n... 44 0.47
12ref|XM_703910.1| PREDICTED: Danio rerio similar to Si:ch211-238n... 44 0.47
13ref|XM_682896.1| PREDICTED: Danio rerio similar to Si:ch211-238n... 44 0.47
14gb|M10217.1|XELMTCG Xenopus laevis mitochondrial DNA, complete g... 44 0.47
15emb|BX470166.11| Zebrafish DNA sequence from clone CH211-238N5 i... 44 0.47
16ref|XM_425794.1| PREDICTED: Gallus gallus similar to transmembra... 42 1.9
17emb|CR727277.2|CNS0GO43 Tetraodon nigroviridis full-length cDNA 42 1.9
18emb|CR718209.2|CNS0GH47 Tetraodon nigroviridis full-length cDNA 42 1.9
19gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.9
20gb|AC153575.5| Mus musculus 6 BAC RP23-157O3 (Roswell Park Cance... 42 1.9
21gb|DQ216379.1| Taeniopygia guttata clone 0058P0061H08 XP_424937-... 40 7.4
22gb|DQ216378.1| Taeniopygia guttata clone 0058P0061G10 XP_424937-... 40 7.4
23gb|DQ216377.1| Taeniopygia guttata clone 0058P0002C09 XP_424937-... 40 7.4
24gb|DQ216376.1| Taeniopygia guttata clone 0058P0006E11 XP_424937-... 40 7.4
25gb|DQ216375.1| Taeniopygia guttata clone 0063P0023C01 XP_424937-... 40 7.4
26gb|DQ216374.1| Taeniopygia guttata clone 0058P0007F09 XP_424937-... 40 7.4
27gb|DQ216373.1| Taeniopygia guttata clone 0065P0026H05 XP_424937-... 40 7.4
28gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosom... 40 7.4
29gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome... 40 7.4
30gb|AC109603.8| Mus musculus strain 129/Sv clone ct7-534h6 map 5,... 40 7.4
31gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosom... 40 7.4
32dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.4
33gb|AC008506.7|AC008506 Homo sapiens chromosome 5 clone CTC-447O6... 40 7.4
34emb|CR962122.2| Medicago truncatula chromosome 5 clone mte1-46l2... 40 7.4

>dbj|AK068519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156O10, full
            insert sequence
          Length = 1447

 Score =  159 bits (80), Expect = 1e-35
 Identities = 238/288 (82%), Gaps = 2/288 (0%)
 Strand = Plus / Plus

                                                                        
Query: 10   gacggagaggaggacgacaactacaagcacctgacggcggagctgtgccgggtctaccgg 69
            ||||| |||||||||||| |||||||||   |||| | |||| |||||||  ||||| | 
Sbjct: 1026 gacggcgaggaggacgacgactacaagcggatgaccgaggagatgtgccgcatctacagc 1085

                                                                        
Query: 70   cacgcgcccagggagttcaccgtcatcgacaggggccggaggaactcggtttgcctg-ag 128
            ||||| ||| |  | |||||| |||||||||||||  ||||||||||  ||||| || ||
Sbjct: 1086 cacgccccccgccaattcaccatcatcgacagggggaggaggaactccatttgcgtgcag 1145

                                                                        
Query: 129  caggagagggttcgaggagctgtacgtcttcagcccaggatccaagtacgagtggtacgg 188
            | ||||||||||||||||| ||||||| |||||||| || || |||||| ||||||||||
Sbjct: 1146 c-ggagagggttcgaggaggtgtacgtgttcagcccggggtcaaagtaccagtggtacgg 1204

                                                                        
Query: 189  gaagtttgcctacgtgtgcatcgggcctgccatgctggagcccgtggtgctgccgccggg 248
            |||||  |||||||||||| | ||||| ||||||||||||||| | |||||| | || ||
Sbjct: 1205 gaagtacgcctacgtgtgcgtggggcccgccatgctggagcccatcgtgctgtcacctgg 1264

                                                            
Query: 249  agccacgtggcaaggggcgcagtgcatccgcaacccaaacctgtagat 296
             ||||| |||  |||||| |||| | | |||||||||||||| |||||
Sbjct: 1265 ggccacatggtcaggggctcagtacctgcgcaacccaaacctctagat 1312



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>ref|XM_469743.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1236

 Score =  155 bits (78), Expect = 2e-34
 Identities = 233/282 (82%), Gaps = 2/282 (0%)
 Strand = Plus / Plus

                                                                        
Query: 10   gacggagaggaggacgacaactacaagcacctgacggcggagctgtgccgggtctaccgg 69
            ||||| |||||||||||| |||||||||   |||| | |||| |||||||  ||||| | 
Sbjct: 952  gacggcgaggaggacgacgactacaagcggatgaccgaggagatgtgccgcatctacagc 1011

                                                                        
Query: 70   cacgcgcccagggagttcaccgtcatcgacaggggccggaggaactcggtttgcctg-ag 128
            ||||| ||| |  | |||||| |||||||||||||  ||||||||||  ||||| || ||
Sbjct: 1012 cacgccccccgccaattcaccatcatcgacagggggaggaggaactccatttgcgtgcag 1071

                                                                        
Query: 129  caggagagggttcgaggagctgtacgtcttcagcccaggatccaagtacgagtggtacgg 188
            | ||||||||||||||||| ||||||| |||||||| || || |||||| ||||||||||
Sbjct: 1072 c-ggagagggttcgaggaggtgtacgtgttcagcccggggtcaaagtaccagtggtacgg 1130

                                                                        
Query: 189  gaagtttgcctacgtgtgcatcgggcctgccatgctggagcccgtggtgctgccgccggg 248
            |||||  |||||||||||| | ||||| ||||||||||||||| | |||||| | || ||
Sbjct: 1131 gaagtacgcctacgtgtgcgtggggcccgccatgctggagcccatcgtgctgtcacctgg 1190

                                                      
Query: 249  agccacgtggcaaggggcgcagtgcatccgcaacccaaacct 290
             ||||| |||  |||||| |||| | | ||||||||||||||
Sbjct: 1191 ggccacatggtcaggggctcagtacctgcgcaacccaaacct 1232



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  131 bits (66), Expect = 3e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                            
Query: 131      ggagagggttcgaggagctgtacgtcttcagcccaggatccaagtacgagtggtacggga 190
                ||||||||||||||||| ||||||| |||||||| || || |||||| ||||||||||||
Sbjct: 30504321 ggagagggttcgaggaggtgtacgtgttcagcccggggtcaaagtaccagtggtacggga 30504262

                                                                            
Query: 191      agtttgcctacgtgtgcatcgggcctgccatgctggagcccgtggtgctgccgccgggag 250
                |||  |||||||||||| | ||||| ||||||||||||||| | |||||| | || || |
Sbjct: 30504261 agtacgcctacgtgtgcgtggggcccgccatgctggagcccatcgtgctgtcacctgggg 30504202

                                                              
Query: 251      ccacgtggcaaggggcgcagtgcatccgcaacccaaacctgtagat 296
                |||| |||  |||||| |||| | | |||||||||||||| |||||
Sbjct: 30504201 ccacatggtcaggggctcagtacctgcgcaacccaaacctctagat 30504156



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 76/94 (80%)
 Strand = Plus / Minus

                                                                            
Query: 10       gacggagaggaggacgacaactacaagcacctgacggcggagctgtgccgggtctaccgg 69
                ||||| |||||||||||| |||||||||   |||| | |||| |||||||  ||||| | 
Sbjct: 30504789 gacggcgaggaggacgacgactacaagcggatgaccgaggagatgtgccgcatctacagc 30504730

                                                  
Query: 70       cacgcgcccagggagttcaccgtcatcgacaggg 103
                ||||| ||| |  | |||||| ||||||||||||
Sbjct: 30504729 cacgccccccgccaattcaccatcatcgacaggg 30504696



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>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
             sequence
          Length = 139872

 Score =  131 bits (66), Expect = 3e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                         
Query: 131   ggagagggttcgaggagctgtacgtcttcagcccaggatccaagtacgagtggtacggga 190
             ||||||||||||||||| ||||||| |||||||| || || |||||| ||||||||||||
Sbjct: 35894 ggagagggttcgaggaggtgtacgtgttcagcccggggtcaaagtaccagtggtacggga 35835

                                                                         
Query: 191   agtttgcctacgtgtgcatcgggcctgccatgctggagcccgtggtgctgccgccgggag 250
             |||  |||||||||||| | ||||| ||||||||||||||| | |||||| | || || |
Sbjct: 35834 agtacgcctacgtgtgcgtggggcccgccatgctggagcccatcgtgctgtcacctgggg 35775

                                                           
Query: 251   ccacgtggcaaggggcgcagtgcatccgcaacccaaacctgtagat 296
             |||| |||  |||||| |||| | | |||||||||||||| |||||
Sbjct: 35774 ccacatggtcaggggctcagtacctgcgcaacccaaacctctagat 35729



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 76/94 (80%)
 Strand = Plus / Minus

                                                                         
Query: 10    gacggagaggaggacgacaactacaagcacctgacggcggagctgtgccgggtctaccgg 69
             ||||| |||||||||||| |||||||||   |||| | |||| |||||||  ||||| | 
Sbjct: 36362 gacggcgaggaggacgacgactacaagcggatgaccgaggagatgtgccgcatctacagc 36303

                                               
Query: 70    cacgcgcccagggagttcaccgtcatcgacaggg 103
             ||||| ||| |  | |||||| ||||||||||||
Sbjct: 36302 cacgccccccgccaattcaccatcatcgacaggg 36269



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  131 bits (66), Expect = 3e-27
 Identities = 141/166 (84%)
 Strand = Plus / Minus

                                                                            
Query: 131      ggagagggttcgaggagctgtacgtcttcagcccaggatccaagtacgagtggtacggga 190
                ||||||||||||||||| ||||||| |||||||| || || |||||| ||||||||||||
Sbjct: 30595743 ggagagggttcgaggaggtgtacgtgttcagcccggggtcaaagtaccagtggtacggga 30595684

                                                                            
Query: 191      agtttgcctacgtgtgcatcgggcctgccatgctggagcccgtggtgctgccgccgggag 250
                |||  |||||||||||| | ||||| ||||||||||||||| | |||||| | || || |
Sbjct: 30595683 agtacgcctacgtgtgcgtggggcccgccatgctggagcccatcgtgctgtcacctgggg 30595624

                                                              
Query: 251      ccacgtggcaaggggcgcagtgcatccgcaacccaaacctgtagat 296
                |||| |||  |||||| |||| | | |||||||||||||| |||||
Sbjct: 30595623 ccacatggtcaggggctcagtacctgcgcaacccaaacctctagat 30595578



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 76/94 (80%)
 Strand = Plus / Minus

                                                                            
Query: 10       gacggagaggaggacgacaactacaagcacctgacggcggagctgtgccgggtctaccgg 69
                ||||| |||||||||||| |||||||||   |||| | |||| |||||||  ||||| | 
Sbjct: 30596211 gacggcgaggaggacgacgactacaagcggatgaccgaggagatgtgccgcatctacagc 30596152

                                                  
Query: 70       cacgcgcccagggagttcaccgtcatcgacaggg 103
                ||||| ||| |  | |||||| ||||||||||||
Sbjct: 30596151 cacgccccccgccaattcaccatcatcgacaggg 30596118



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>gb|BT009098.1| Triticum aestivum clone wkm2c.pk006.d11:fis, full insert mRNA
           sequence
          Length = 772

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                       
Query: 408 taatacaatgtgtgctggagaagtgcagatgctgctgcaccttcagctcagcagaggaga 467
           ||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 680 taatacaatgtgtgccggagaagtgcatatgctgccgcaccttcagctcagcagaggaga 621

            
Query: 468 t 468
           |
Sbjct: 620 t 620



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>ref|XM_424398.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ13842
           (LOC426786), mRNA
          Length = 2115

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 418 tgtgctggagaagtgcagatgct 440
           |||||||||||||||||||||||
Sbjct: 87  tgtgctggagaagtgcagatgct 65



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>emb|BX469889.7| Zebrafish DNA sequence from clone DKEY-156P3 in linkage group 18,
             complete sequence
          Length = 177975

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 420   tgctggagaagtgcagatgctgctgc 445
             |||||||||||| |||||||||||||
Sbjct: 85143 tgctggagaagttcagatgctgctgc 85118



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>ref|XM_703913.1| PREDICTED: Danio rerio similar to Si:ch211-238n5.5 protein,
           transcript variant 5 (LOC559703), mRNA
          Length = 1922

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 420 tgctggagaagtgcagatgctgctgc 445
           |||||||||||| |||||||||||||
Sbjct: 147 tgctggagaagttcagatgctgctgc 122



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>ref|XM_703912.1| PREDICTED: Danio rerio similar to Si:ch211-238n5.5 protein,
           transcript variant 4 (LOC559703), mRNA
          Length = 1997

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 420 tgctggagaagtgcagatgctgctgc 445
           |||||||||||| |||||||||||||
Sbjct: 267 tgctggagaagttcagatgctgctgc 242



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>ref|XM_703911.1| PREDICTED: Danio rerio similar to Si:ch211-238n5.5 protein,
           transcript variant 3 (LOC559703), mRNA
          Length = 1904

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 420 tgctggagaagtgcagatgctgctgc 445
           |||||||||||| |||||||||||||
Sbjct: 129 tgctggagaagttcagatgctgctgc 104



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>ref|XM_703910.1| PREDICTED: Danio rerio similar to Si:ch211-238n5.5 protein,
           transcript variant 2 (LOC559703), mRNA
          Length = 1940

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 420 tgctggagaagtgcagatgctgctgc 445
           |||||||||||| |||||||||||||
Sbjct: 165 tgctggagaagttcagatgctgctgc 140



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>ref|XM_682896.1| PREDICTED: Danio rerio similar to Si:ch211-238n5.5 protein,
           transcript variant 1 (LOC559703), mRNA
          Length = 2042

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 420 tgctggagaagtgcagatgctgctgc 445
           |||||||||||| |||||||||||||
Sbjct: 267 tgctggagaagttcagatgctgctgc 242



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>gb|M10217.1|XELMTCG Xenopus laevis mitochondrial DNA, complete genome
          Length = 17553

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 424  ggagaagtgcagatgctgctgc 445
            ||||||||||||||||||||||
Sbjct: 6189 ggagaagtgcagatgctgctgc 6168



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>emb|BX470166.11| Zebrafish DNA sequence from clone CH211-238N5 in linkage group 18,
             complete sequence
          Length = 117241

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 420   tgctggagaagtgcagatgctgctgc 445
             |||||||||||| |||||||||||||
Sbjct: 62436 tgctggagaagttcagatgctgctgc 62461



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>ref|XM_425794.1| PREDICTED: Gallus gallus similar to transmembrane receptor
            Roundabout3 (LOC428235), mRNA
          Length = 3792

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  ggagcccgtggtgctgccgcc 245
            |||||||||||||||||||||
Sbjct: 1905 ggagcccgtggtgctgccgcc 1925



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>emb|CR727277.2|CNS0GO43 Tetraodon nigroviridis full-length cDNA
          Length = 1546

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 430 gtgcagatgctgctgcaccttcagc 454
           ||||||| |||||||||||||||||
Sbjct: 256 gtgcagaagctgctgcaccttcagc 232



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>emb|CR718209.2|CNS0GH47 Tetraodon nigroviridis full-length cDNA
          Length = 1025

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 430 gtgcagatgctgctgcaccttcagc 454
           ||||||| |||||||||||||||||
Sbjct: 103 gtgcagaagctgctgcaccttcagc 79



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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 427     gaagtgcagatgctgctgcac 447
               |||||||||||||||||||||
Sbjct: 1856438 gaagtgcagatgctgctgcac 1856458



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>gb|AC153575.5| Mus musculus 6 BAC RP23-157O3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215023

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 315   atatactgcagcaacaatact 335
             |||||||||||||||||||||
Sbjct: 93341 atatactgcagcaacaatact 93361



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>gb|DQ216379.1| Taeniopygia guttata clone 0058P0061H08 XP_424937-like mRNA,
           complete sequence
          Length = 1190

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 gtggtgctgccgccgggagc 251
           ||||||||||||||||||||
Sbjct: 37  gtggtgctgccgccgggagc 56



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>gb|DQ216378.1| Taeniopygia guttata clone 0058P0061G10 XP_424937-like mRNA,
           complete sequence
          Length = 1190

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 gtggtgctgccgccgggagc 251
           ||||||||||||||||||||
Sbjct: 37  gtggtgctgccgccgggagc 56



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>gb|DQ216377.1| Taeniopygia guttata clone 0058P0002C09 XP_424937-like mRNA,
           complete sequence
          Length = 1188

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 gtggtgctgccgccgggagc 251
           ||||||||||||||||||||
Sbjct: 17  gtggtgctgccgccgggagc 36



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>gb|DQ216376.1| Taeniopygia guttata clone 0058P0006E11 XP_424937-like mRNA,
           complete sequence
          Length = 1176

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 gtggtgctgccgccgggagc 251
           ||||||||||||||||||||
Sbjct: 20  gtggtgctgccgccgggagc 39



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>gb|DQ216375.1| Taeniopygia guttata clone 0063P0023C01 XP_424937-like mRNA,
           complete sequence
          Length = 1163

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 gtggtgctgccgccgggagc 251
           ||||||||||||||||||||
Sbjct: 7   gtggtgctgccgccgggagc 26



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>gb|DQ216374.1| Taeniopygia guttata clone 0058P0007F09 XP_424937-like mRNA,
           complete sequence
          Length = 1198

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 gtggtgctgccgccgggagc 251
           ||||||||||||||||||||
Sbjct: 45  gtggtgctgccgccgggagc 64



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>gb|DQ216373.1| Taeniopygia guttata clone 0065P0026H05 XP_424937-like mRNA,
           complete sequence
          Length = 1194

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 232 gtggtgctgccgccgggagc 251
           ||||||||||||||||||||
Sbjct: 38  gtggtgctgccgccgggagc 57



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>gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosome 7, complete sequence
          Length = 179746

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   aacaaggagatcagtaggct 386
             ||||||||||||||||||||
Sbjct: 69709 aacaaggagatcagtaggct 69690



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>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence
          Length = 242229

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 414   aatgtgtgctggagaagtgcagatgctg 441
             ||||||||||||||||  ||||||||||
Sbjct: 10334 aatgtgtgctggagaaaagcagatgctg 10307



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>gb|AC109603.8| Mus musculus strain 129/Sv clone ct7-534h6 map 5, complete sequence
          Length = 81390

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   acgtgtgaaacaaggagatc 378
             ||||||||||||||||||||
Sbjct: 32204 acgtgtgaaacaaggagatc 32223



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>gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosome 9, complete sequence
          Length = 185878

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 414   aatgtgtgctggagaagtgcagatgctg 441
             ||||||||||||||||  ||||||||||
Sbjct: 99100 aatgtgtgctggagaaaagcagatgctg 99073



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 135     agggttcgaggagctgtacg 154
               ||||||||||||||||||||
Sbjct: 4424654 agggttcgaggagctgtacg 4424635



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>gb|AC008506.7|AC008506 Homo sapiens chromosome 5 clone CTC-447O6, complete sequence
          Length = 191557

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    acaagataataatacaatgt 418
              ||||||||||||||||||||
Sbjct: 188535 acaagataataatacaatgt 188554



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>emb|CR962122.2| Medicago truncatula chromosome 5 clone mte1-46l20, COMPLETE SEQUENCE
          Length = 150486

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   caacaatactattgctcatg 345
             ||||||||||||||||||||
Sbjct: 22075 caacaatactattgctcatg 22056


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,483,604
Number of Sequences: 3902068
Number of extensions: 4483604
Number of successful extensions: 89481
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89300
Number of HSP's gapped (non-prelim): 174
length of query: 547
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 524
effective length of database: 17,143,297,704
effective search space: 8983087996896
effective search space used: 8983087996896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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