| Clone Name | baal11m13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 525 bits (265), Expect = e-146 Identities = 288/299 (96%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15701 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 15760 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaattctacctcn 120 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 15761 tggttgattgccagtatgctgtatgctctgtgaagataaatgggactgaattctacctcc 15820 Query: 121 tgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcag 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 15821 tgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcag 15880 Query: 181 caactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15881 caactggagcagcagctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 15940 Query: 241 taaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15941 taaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaacacttgcagag 15999
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 517 bits (261), Expect = e-144 Identities = 287/299 (95%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9716 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 9775 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaattctacctcn 120 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 9776 tggttgattgccagtatgctgtatgctctgtgaagataaatgagactgaattctacctcc 9835 Query: 121 tgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcag 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9836 tgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcag 9895 Query: 181 caactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9896 caactggagcagcagctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 9955 Query: 241 taaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9956 taaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaacacttgcagag 10014
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 517 bits (261), Expect = e-144 Identities = 287/299 (95%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61438 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 61497 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaattctacctcn 120 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 61498 tggttgattgccagtatgctgtatgctctgtgaagataaatgagactgaattctacctcc 61557 Query: 121 tgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcag 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61558 tgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcag 61617 Query: 181 caactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61618 caactggagcagcagctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 61677 Query: 241 taaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61678 taaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaacacttgcagag 61736
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 517 bits (261), Expect = e-144 Identities = 287/299 (95%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10487 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 10546 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaattctacctcn 120 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 10547 tggttgattgccagtatgctgtatgctctgtgaagataaatgagactgaattctacctcc 10606 Query: 121 tgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcag 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10607 tgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcag 10666 Query: 181 caactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10667 caactggagcagcagctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 10726 Query: 241 taaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10727 taaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaacacttgcagag 10785
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 474 bits (239), Expect = e-131 Identities = 263/272 (96%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2435 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 2494 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaattctacctcn 120 ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2495 tggttgatttcaagtatgctgtatgctctgtgaagataaatgggactgaattctacctcc 2554 Query: 121 tgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcag 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2555 tgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcag 2614 Query: 181 caactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 240 |||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2615 caactggagcagcagctggaaagctcactgaaagatatcagatccaggaaggtagtgatt 2674 Query: 241 taaatgagttgatacagcagcacaatttatat 272 ||||||| |||||||||||||||||||||||| Sbjct: 2675 taaatgaattgatacagcagcacaatttatat 2706
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 474 bits (239), Expect = e-131 Identities = 263/272 (96%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2483 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 2542 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaattctacctcn 120 ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2543 tggttgatttcaagtatgctgtatgctctgtgaagataaatgggactgaattctacctcc 2602 Query: 121 tgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcag 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2603 tgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcag 2662 Query: 181 caactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgatt 240 |||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2663 caactggagcagcagctggaaagctcactgaaagatatcagatccaggaaggtagtgatt 2722 Query: 241 taaatgagttgatacagcagcacaatttatat 272 ||||||| |||||||||||||||||||||||| Sbjct: 2723 taaatgaattgatacagcagcacaatttatat 2754
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 410 bits (207), Expect = e-111 Identities = 256/272 (94%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11016 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 11075 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| |||| || Sbjct: 11076 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctacatc 11135 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 11136 ctgcatctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 11195 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 11196 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 11255 Query: 240 ttaaatgagttgatacagcagcacaatttata 271 |||||||| |||||||||||||||||| |||| Sbjct: 11256 ttaaatgatttgatacagcagcacaatatata 11287
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 410 bits (207), Expect = e-111 Identities = 256/272 (94%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10785 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 10844 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| |||| || Sbjct: 10845 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctacatc 10904 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10905 ctgcatctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 10964 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 10965 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 11024 Query: 240 ttaaatgagttgatacagcagcacaatttata 271 |||||||| |||||||||||||||||| |||| Sbjct: 11025 ttaaatgatttgatacagcagcacaatatata 11056
>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete cds; and gypsy retrotransposon Sukkula, complete sequence Length = 6730 Score = 410 bits (207), Expect = e-111 Identities = 276/300 (92%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5280 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 5339 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| |||| || Sbjct: 5340 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctacatc 5399 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5400 ctgcatctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 5459 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 5460 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 5519 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 5520 ttaaatgatttgatacagcagcacaat--atataaaaaaacaagaaaaacacttgcagag 5577
>gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256C17 VRN-A1 (VRN-A1) gene, complete cds Length = 5065 Score = 410 bits (207), Expect = e-111 Identities = 276/300 (92%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3615 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 3674 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| |||| || Sbjct: 3675 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctacatc 3734 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3735 ctgcatctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 3794 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 3795 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 3854 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 3855 ttaaatgatttgatacagcagcacaat--atataaaaaaacaagaaaaacacttgcagag 3912
>gb|AF159711.1|AF159711 Secale cereale cultivar Petkus MADS-box transcription factor (MADS2) gene, partial cds Length = 485 Score = 396 bits (200), Expect = e-107 Identities = 255/272 (93%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggaaactgaaggcgaaggttgaaacaatacagaaatgtcaaaagtaatttgtaacgattt 82 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 |||||||||||||||||| || || ||||| ||||| |||||||||||||| |||| || Sbjct: 83 tggttgattgccagtatgttgtatactctg--aagatgaatgggactgaatttctacatc 140 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 ctggacctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 200 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 201 gcaactggagcagcagctggaaagctcactaaaacatatcagatccaggaaggtagtgat 260 Query: 240 ttaaatgagttgatacagcagcacaatttata 271 ||| |||| ||||||||||||||||||||||| Sbjct: 261 ttagatgatttgatacagcagcacaatttata 292
>gb|AY055115.1| Triticum aestivum MADS-box transcription factor (MADS) gene, partial cds Length = 474 Score = 392 bits (198), Expect = e-106 Identities = 274/300 (91%), Gaps = 2/300 (0%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 82 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| |||| || Sbjct: 83 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctacatc 142 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgcatctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 202 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 203 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 262 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| ||| ||||||| ||||||||| | |||||||||||||||||||| Sbjct: 263 ttaaatgatttg-tacagcaacacaatttaaaaaataaaacaagaaaaacacttgcagag 321
>gb|AY055113.1| Triticum aestivum subsp. compactum MADS-box transcription factor (MADS) gene, partial cds Length = 486 Score = 392 bits (198), Expect = e-106 Identities = 274/300 (91%), Gaps = 2/300 (0%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 82 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| |||| || Sbjct: 83 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctacatc 142 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgcatctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 202 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 203 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 262 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| ||| ||||||| ||||||||| | |||||||||||||||||||| Sbjct: 263 ttaaatgatttg-tacagcaacacaatttaaaaaataaaacaagaaaaacacttgcagag 321
>gb|AY055112.1| Triticum aestivum subsp. spelta MADS-box transcription factor (MADS) gene, partial cds Length = 485 Score = 391 bits (197), Expect = e-106 Identities = 276/302 (91%), Gaps = 4/302 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 79 Query: 61 tggttgattgccagtatgctgnatgc--tctgtgaagataaatgggactgaatt-ctacc 117 ||||||||||||||||| | || | |||||||||||||||||||||||||| |||| Sbjct: 80 tggttgattgccagtatattatatacactctgtgaagataaatgggactgaatttctaca 139 Query: 118 tcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttg 177 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tcctgcacctgcaggcatctgatgggagaggatcttgaatctttgaatctcaaggagttg 199 Query: 178 cagcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtg 237 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || Sbjct: 200 cagcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactg 259 Query: 238 atttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcag 297 |||||||||| ||| ||||||| ||||||||| | |||||||||||||||||| Sbjct: 260 atttaaatgatttg-tacagcaacacaatttaaaaaataaaacaagaaaaacacttgcag 318 Query: 298 ag 299 || Sbjct: 319 ag 320
>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 391 bits (197), Expect = e-106 Identities = 276/302 (91%), Gaps = 4/302 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11700 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 11759 Query: 61 tggttgattgccagtatgctgnatgc--tctgtgaagataaatgggactgaatt-ctacc 117 ||||||||||||||||| | || | |||||||||||||||||||||||||| |||| Sbjct: 11760 tggttgattgccagtatattatatacactctgtgaagataaatgggactgaatttctaca 11819 Query: 118 tcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttg 177 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 11820 tcctgcacctgcaggcatctgatgggagaggatcttgaatctttgaatctcaaggagttg 11879 Query: 178 cagcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtg 237 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || Sbjct: 11880 cagcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactg 11939 Query: 238 atttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcag 297 |||||||||| ||| ||||||| ||||||||| | |||||||||||||||||| Sbjct: 11940 atttaaatgatttg-tacagcaacacaatttaaaaaataaaacaagaaaaacacttgcag 11998 Query: 298 ag 299 || Sbjct: 11999 ag 12000
>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene, complete cds Length = 6297 Score = 391 bits (197), Expect = e-106 Identities = 276/302 (91%), Gaps = 4/302 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4856 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 4915 Query: 61 tggttgattgccagtatgctgnatgc--tctgtgaagataaatgggactgaatt-ctacc 117 ||||||||||||||||| | || | |||||||||||||||||||||||||| |||| Sbjct: 4916 tggttgattgccagtatattatatacactctgtgaagataaatgggactgaatttctaca 4975 Query: 118 tcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttg 177 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4976 tcctgcacctgcaggcatctgatgggagaggatcttgaatctttgaatctcaaggagttg 5035 Query: 178 cagcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtg 237 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || Sbjct: 5036 cagcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactg 5095 Query: 238 atttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcag 297 |||||||||| ||| ||||||| ||||||||| | |||||||||||||||||| Sbjct: 5096 atttaaatgatttg-tacagcaacacaatttaaaaaataaaacaagaaaaacacttgcag 5154 Query: 298 ag 299 || Sbjct: 5155 ag 5156
>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 391 bits (197), Expect = e-106 Identities = 276/302 (91%), Gaps = 4/302 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11700 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 11759 Query: 61 tggttgattgccagtatgctgnatgc--tctgtgaagataaatgggactgaatt-ctacc 117 ||||||||||||||||| | || | |||||||||||||||||||||||||| |||| Sbjct: 11760 tggttgattgccagtatattatatacactctgtgaagataaatgggactgaatttctaca 11819 Query: 118 tcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttg 177 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 11820 tcctgcacctgcaggcatctgatgggagaggatcttgaatctttgaatctcaaggagttg 11879 Query: 178 cagcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtg 237 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| || Sbjct: 11880 cagcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactg 11939 Query: 238 atttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcag 297 |||||||||| ||| ||||||| ||||||||| | |||||||||||||||||| Sbjct: 11940 atttaaatgatttg-tacagcaacacaatttaaaaaataaaacaagaaaaacacttgcag 11998 Query: 298 ag 299 || Sbjct: 11999 ag 12000
>gb|AF159712.1|AF159712 Secale strictum subsp. kuprijanovii MADS-box transcription factor (MADS2) gene, partial cds Length = 485 Score = 389 bits (196), Expect = e-105 Identities = 254/272 (93%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggaaactgaaggcgaaggttgaaacaatacagaaatgtcaaaagtaatttgtaacgattt 82 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 |||||||||||||||||| || || ||||| ||||| |||||||||||||| |||| || Sbjct: 83 tggttgattgccagtatgttgtatactctg--aagatgaatgggactgaatttctacatc 140 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 ctggacctgcaggcatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 200 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| |||||||||||||| |||||||||||| | |||||||||||||| Sbjct: 201 gcaactggagcagcagctggaaagctcactaaaacatatcagatctaggaaggtagtgat 260 Query: 240 ttaaatgagttgatacagcagcacaatttata 271 ||| |||| ||||||||||||||||||||||| Sbjct: 261 ttagatgatttgatacagcagcacaatttata 292
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 387 bits (195), Expect = e-104 Identities = 273/300 (91%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14367 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtagcgattt 14426 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| ||| || Sbjct: 14427 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctatatc 14486 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14487 ctgcatctgcagacatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 14546 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 14547 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 14606 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 14607 ttaaatgatttgatacagcagcacaat--atataaaaaaacaagaaaaacacttgcagag 14664
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 387 bits (195), Expect = e-104 Identities = 273/300 (91%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 13831 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtagcgattt 13890 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| ||| || Sbjct: 13891 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctatatc 13950 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 13951 ctgcatctgcagacatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 14010 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 14011 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 14070 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 14071 ttaaatgatttgatacagcagcacaat--atataaaaaaacaagaaaaacacttgcagag 14128
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 387 bits (195), Expect = e-104 Identities = 273/300 (91%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14352 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtagcgattt 14411 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| ||| || Sbjct: 14412 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctatatc 14471 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 14472 ctgcatctgcagacatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 14531 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 14532 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 14591 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 14592 ttaaatgatttgatacagcagcacaat--atataaaaaaacaagaaaaacacttgcagag 14649
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 387 bits (195), Expect = e-104 Identities = 273/300 (91%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 80903 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtagcgattt 80962 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| || || | || |||||||||||||||||||||| ||| || Sbjct: 80963 tggttgattgccagtatattgtatacactctgaagataaatgggactgaatttctatatc 81022 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 81023 ctgcatctgcagacatctcatgggagaggatcttgaatctttgaatctcaaggagttgca 81082 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 81083 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 81142 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 81143 ttaaatgatttgatacagcagcacaat--atataaaaaaacaagaaaaacacttgcagag 81200
>gb|AY055114.1| Triticum aestivum subsp. sphaerococcum MADS-box transcription factor (MADS) gene, partial cds Length = 486 Score = 361 bits (182), Expect = 8e-97 Identities = 270/300 (90%), Gaps = 2/300 (0%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 23 ggaaactgaaggcgaaggttgaaacaatacagaaatgtcaaaagtaatttgtaatgatta 82 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| | || | || |||||||||||||||||||||| |||| || Sbjct: 83 tggttgattgccagtatattatatacactctgaagataaatgggactgaatttctacatc 142 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgcacctgcaggcatctggtgggagaggatcttgaatctttgaatctcaaggagttgca 202 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 203 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 262 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| ||| ||||||| ||||||||| | |||||||||||||||||||| Sbjct: 263 ttaaatgatttg-tacagcaacacaatttaaaaaataaaacaagaaaaacacttgcagag 321
>gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN-D1 (VRN-D1) gene, complete cds Length = 12335 Score = 357 bits (180), Expect = 1e-95 Identities = 251/273 (91%), Gaps = 2/273 (0%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 10903 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaatgatta 10962 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| | || | || |||||||||||||||||||||| |||| || Sbjct: 10963 tggttgattgccagtatattatatacactctgaagataaatgggactgaatttctacatc 11022 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 11023 ctgcacctgcaggcatctgatgggagaggatcttgaatctttgaatctcaaggagttgca 11082 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 11083 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgac 11142 Query: 240 ttaaatgagttgatacagcagcacaatttatat 272 |||||||| ||| ||||||| ||| ||||||| Sbjct: 11143 ttaaatgatttg-tacagcaacactttttatat 11174
>gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, complete cds Length = 12224 Score = 357 bits (180), Expect = 1e-95 Identities = 251/273 (91%), Gaps = 2/273 (0%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 10792 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaatgatta 10851 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| | || | || |||||||||||||||||||||| |||| || Sbjct: 10852 tggttgattgccagtatattatatacactctgaagataaatgggactgaatttctacatc 10911 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10912 ctgcacctgcaggcatctgatgggagaggatcttgaatctttgaatctcaaggagttgca 10971 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 10972 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgac 11031 Query: 240 ttaaatgagttgatacagcagcacaatttatat 272 |||||||| ||| ||||||| ||| ||||||| Sbjct: 11032 ttaaatgatttg-tacagcaacactttttatat 11063
>gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN-D1 (VRN-D1) gene, complete cds Length = 8100 Score = 357 bits (180), Expect = 1e-95 Identities = 251/273 (91%), Gaps = 2/273 (0%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaacgattt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 6668 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatttgtaatgatta 6727 Query: 61 tggttgattgccagtatgctgnatgctctgtgaagataaatgggactgaatt-ctacctc 119 ||||||||||||||||| | || | || |||||||||||||||||||||| |||| || Sbjct: 6728 tggttgattgccagtatattatatacactctgaagataaatgggactgaatttctacatc 6787 Query: 120 ntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgca 179 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6788 ctgcacctgcaggcatctgatgggagaggatcttgaatctttgaatctcaaggagttgca 6847 Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 6848 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgac 6907 Query: 240 ttaaatgagttgatacagcagcacaatttatat 272 |||||||| ||| ||||||| ||| ||||||| Sbjct: 6908 ttaaatgatttg-tacagcaacactttttatat 6939
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 317 bits (160), Expect = 1e-83 Identities = 181/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 309 bits (156), Expect = 3e-81 Identities = 180/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacaacagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 309 bits (156), Expect = 3e-81 Identities = 180/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacaacagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 309 bits (156), Expect = 3e-81 Identities = 180/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacaacagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 309 bits (156), Expect = 3e-81 Identities = 180/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacaacagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 309 bits (156), Expect = 3e-81 Identities = 180/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacaacagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 309 bits (156), Expect = 3e-81 Identities = 180/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacaacagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 309 bits (156), Expect = 3e-81 Identities = 180/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcctgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcaactggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacaacagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 309 bits (156), Expect = 3e-81 Identities = 180/191 (94%) Strand = Plus / Plus Query: 109 aattctacctcntgcacctgcaggcatcttatgggagaggatcttgaatctttgaatctc 168 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 aattctacctcatgcacctgcaggcatctcatgggagaggatcttgaatctttgaatctc 60 Query: 169 aaggagttgcagcaactggagcagcanctggaaagctcactgaaacatatcagagccagg 228 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 aaggagttgcagcagctggagcagcagctggaaagctcactgaaacatatcagagccagg 120 Query: 229 aaggtagtgatttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaa 288 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aaggtagtgatttaaatgagttgatacagcagcacaatttatataaaaaaacaagaaaaa 180 Query: 289 cacttgcagag 299 ||||||||||| Sbjct: 181 cacttgcagag 191
>gb|AY244509.1| Triticum monococcum cultivar G2528 MADS-box transcriptional factor (AP1) gene, partial cds Length = 666 Score = 218 bits (110), Expect = 8e-54 Identities = 147/161 (91%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5 atgggagaggatcttgagtctttgaatctcaaggagttgcagcaactggagcagcagctg 64 Query: 199 gaaagctcactgaaacatatcagagccaggaaggtagtgatttaaatgagttgatacagc 258 |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||| Sbjct: 65 gaaagctcactgaaacatatcagatccaggaaggtactgatttaaatgatttgatacagc 124 Query: 259 agcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||| |||||||||||||||||||| Sbjct: 125 agcacaat--atataaaaaaacaagaaaaacacttgcagag 163
>gb|AY244508.1| Triticum monococcum cultivar G1777 MADS-box transcriptional factor (AP1) gene, partial cds Length = 667 Score = 210 bits (106), Expect = 2e-51 Identities = 146/161 (90%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 5 atgggagaggatcttgaatctctgaatctcaaggagttgcagcaactggagcagcagctg 64 Query: 199 gaaagctcactgaaacatatcagagccaggaaggtagtgatttaaatgagttgatacagc 258 |||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||| Sbjct: 65 gaaagctcactgaaacatatcagatccagggaggtactgatttaaatgatttgatacagc 124 Query: 259 agcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||| |||||||||||||||||||| Sbjct: 125 agcacaat--atataaaaaaacaagaaaaacacttgcagag 163
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1151 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 523 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 524 gcagctggaaagctcactgaaacatatcagagccaggaag 563 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 464
>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1105 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 478 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 479 gcagctggaaagctcactgaaacatatcagagccaggaag 518 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 419
>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 486 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 487 gcagctggaaagctcactgaaacatatcagagccaggaag 526 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 427
>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 486 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 487 gcagctggaaagctcactgaaacatatcagagccaggaag 526 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 427
>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 486 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 487 gcagctggaaagctcactgaaacatatcagagccaggaag 526 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 427
>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 490 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 491 gcagctggaaagctcactgaaacatatcagagccaggaag 530 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 431
>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 486 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 487 gcagctggaaagctcactgaaacatatcagagccaggaag 526 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 427
>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 486 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 487 gcagctggaaagctcactgaaacatatcagagccaggaag 526 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 427
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 490 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 491 gcagctggaaagctcactgaaacatatcagagccaggaag 530 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 431
>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 486 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 487 gcagctggaaagctcactgaaacatatcagagccaggaag 526 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 427
>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 486 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 487 gcagctggaaagctcactgaaacatatcagagccaggaag 526 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 427
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 490 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 491 gcagctggaaagctcactgaaacatatcagagccaggaag 530 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 431
>gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, complete cds Length = 1153 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 519 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 520 gcagctggaaagctcactgaaacatatcagagccaggaag 559 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 460
>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds Length = 1157 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 523 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 524 gcagctggaaagctcactgaaacatatcagagccaggaag 563 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 464
>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete cds Length = 1145 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 511 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 512 gcagctggaaagctcactgaaacatatcagagccaggaag 551 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 452
>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete cds Length = 1153 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 519 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 520 gcagctggaaagctcactgaaacatatcagagccaggaag 559 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 460
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene) Length = 1196 Score = 184 bits (93), Expect = 1e-43 Identities = 98/100 (98%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 529 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 530 gcagctggaaagctcactgaaacatatcagagccaggaag 569 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 470
>gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, complete cds Length = 1210 Score = 176 bits (89), Expect = 3e-41 Identities = 97/100 (97%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 gcatctgatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 538 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| ||||||||||||||||||||||||||| |||||||| Sbjct: 539 gcagctggaaagctcactgaaacatatcagatccaggaag 578 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 479
>emb|AJ577374.1|TAE577374 Triticum aestivum partial mRNA for putative MADS-box transcription factor (mads#11 gene) Length = 770 Score = 176 bits (89), Expect = 3e-41 Identities = 97/100 (97%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 gcatctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 131 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| ||||||||||||||||||||||||||| |||||||| Sbjct: 132 gcagctggaaagctcactgaaacatatcagatccaggaag 171 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 72
>dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box transcription factor, complete cds Length = 1161 Score = 176 bits (89), Expect = 3e-41 Identities = 97/100 (97%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gcatctgatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 463 Query: 192 gcanctggaaagctcactgaaacatatcagagccaggaag 231 ||| ||||||||||||||||||||||||||| |||||||| Sbjct: 464 gcagctggaaagctcactgaaacatatcagatccaggaag 503 Score = 87.7 bits (44), Expect = 2e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 404
>gb|AY466448.1| Triticum turgidum subsp. durum clone BAC 1256C17 VRN-A1 gene, partial cds Length = 959 Score = 145 bits (73), Expect = 9e-32 Identities = 107/120 (89%), Gaps = 2/120 (1%) Strand = Plus / Plus Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 60 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| |||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 61 ttaaatgatttgatacagcagcacaat--atataaaaaaacaagaaaaacacttgcagag 118
>gb|AY198326.1| Lolium perenne MADS1 mRNA, complete cds Length = 1284 Score = 145 bits (73), Expect = 9e-32 Identities = 90/96 (93%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 493 gcatctaatgggagaggatcttgaatcattgaatctcaaggagttgcagcaactagagca 552 Query: 192 gcanctggaaagctcactgaaacatatcagagccag 227 ||| |||||||| |||||||||||||| |||||||| Sbjct: 553 gcagctggaaagttcactgaaacatattagagccag 588 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 450 ggaaactgaaggcgaaggttgagacaatacagagatgtcaaaag 493
>gb|AF035378.1|AF035378 Lolium temulentum MADS-box protein 1 (MADS1) mRNA, complete cds Length = 1207 Score = 137 bits (69), Expect = 2e-29 Identities = 89/96 (92%) Strand = Plus / Plus Query: 132 gcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagca 191 |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 469 gcatctaatgggagaggatcttgaatcattgaatctcaaggagttgcagcaactagagca 528 Query: 192 gcanctggaaagctcactgaaacatatcagagccag 227 ||| |||||||| |||||||||||||| ||| |||| Sbjct: 529 gcagctggaaagttcactgaaacatattagatccag 564 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 426 ggaaactgaaggcgaaggttgagacaatacagagatgtcaaaag 469
>gb|AY395714.1| Dendrocalamus latiflorus MADS-box protein (Mads1) mRNA, complete cds Length = 735 Score = 131 bits (66), Expect = 1e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| Sbjct: 337 atgggagaggatcttgaatctttgaatctcaaggagctgcagcaactcgagcagcagctg 396 Query: 199 gaaagctcactgaaacatatcagagccag 227 ||||| ||| |||||||||||||| |||| Sbjct: 397 gaaagttcagtgaaacatatcagatccag 425 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 287 ggaaactgaaggcgaaggttgagacgatacagaaatgtcaaaag 330
>gb|AY466447.1| Triticum turgidum subsp. durum clone BAC 1225D16 VRN-B1 gene, partial cds Length = 965 Score = 127 bits (64), Expect = 2e-26 Identities = 105/120 (87%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgat 60 Query: 240 ttaaatgagttgatacagcagcacaatttatatnnnnnnncaagaaaaacacttgcagag 299 |||||||| ||| ||||||| ||||||||| | |||||||||||||||||||| Sbjct: 61 ttaaatgatttg-tacagcaacacaatttaaaaaataaaacaagaaaaacacttgcagag 119
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 123 bits (62), Expect = 3e-25 Identities = 97/109 (88%) Strand = Plus / Plus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 |||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 62808 cctgcaggcacctcatgggagaggatcttgaatctttgaatctcaaagagctgcagcagc 62867 Query: 185 tggagcagcanctggaaagctcactgaaacatatcagagccaggaaggt 233 |||||||||| ||||||| || |||||||||||||| |||| ||||| Sbjct: 62868 tggagcagcagctggaaaattcgttgaaacatatcagatccagaaaggt 62916 Score = 89.7 bits (45), Expect = 5e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatt 49 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 62684 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaagtaatt 62732
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 123 bits (62), Expect = 3e-25 Identities = 97/109 (88%) Strand = Plus / Minus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 |||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 30740975 cctgcaggcacctcatgggagaggatcttgaatctttgaatctcaaagagctgcagcagc 30740916 Query: 185 tggagcagcanctggaaagctcactgaaacatatcagagccaggaaggt 233 |||||||||| ||||||| || |||||||||||||| |||| ||||| Sbjct: 30740915 tggagcagcagctggaaaattcgttgaaacatatcagatccagaaaggt 30740867 Score = 89.7 bits (45), Expect = 5e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatt 49 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 30741099 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaagtaatt 30741051
>gb|AY395715.1| Dendrocalamus latiflorus MADS-box protein (Mads2) mRNA, complete cds Length = 735 Score = 123 bits (62), Expect = 3e-25 Identities = 82/89 (92%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 ||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| ||| Sbjct: 337 atgggagaggatcctgaatctttgaatctcaaggagctgcagcaactcgagcagcagctg 396 Query: 199 gaaagctcactgaaacatatcagagccag 227 ||||| ||| |||||||||||||| |||| Sbjct: 397 gaaagttcagtgaaacatatcagatccag 425 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 287 ggaaactgaaggcgaaggttgagacgatacagaaatgtcaaaag 330
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 123 bits (62), Expect = 3e-25 Identities = 97/109 (88%) Strand = Plus / Plus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 |||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 21415 cctgcaggcacctcatgggagaggatcttgaatctttgaatctcaaagagctgcagcagc 21474 Query: 185 tggagcagcanctggaaagctcactgaaacatatcagagccaggaaggt 233 |||||||||| ||||||| || |||||||||||||| |||| ||||| Sbjct: 21475 tggagcagcagctggaaaattcgttgaaacatatcagatccagaaaggt 21523 Score = 89.7 bits (45), Expect = 5e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatt 49 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 21291 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaagtaatt 21339
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 123 bits (62), Expect = 3e-25 Identities = 97/109 (88%) Strand = Plus / Minus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 |||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 49676 cctgcaggcacctcatgggagaggatcttgaatctttgaatctcaaagagctgcagcagc 49617 Query: 185 tggagcagcanctggaaagctcactgaaacatatcagagccaggaaggt 233 |||||||||| ||||||| || |||||||||||||| |||| ||||| Sbjct: 49616 tggagcagcagctggaaaattcgttgaaacatatcagatccagaaaggt 49568 Score = 89.7 bits (45), Expect = 5e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatt 49 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 49800 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaagtaatt 49752
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 123 bits (62), Expect = 3e-25 Identities = 97/109 (88%) Strand = Plus / Minus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 |||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 30832399 cctgcaggcacctcatgggagaggatcttgaatctttgaatctcaaagagctgcagcagc 30832340 Query: 185 tggagcagcanctggaaagctcactgaaacatatcagagccaggaaggt 233 |||||||||| ||||||| || |||||||||||||| |||| ||||| Sbjct: 30832339 tggagcagcagctggaaaattcgttgaaacatatcagatccagaaaggt 30832291 Score = 89.7 bits (45), Expect = 5e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaagtaatt 49 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 30832523 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaagtaatt 30832475
>ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 107 bits (54), Expect = 2e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 360 atgggagaggatcttgaatctttgaatctcaaagagctgcagcagctggagcagcagctg 419 Query: 199 gaaagctcactgaaacatatcagagccag 227 |||| || |||||||||||||| |||| Sbjct: 420 gaaaattcgttgaaacatatcagatccag 448 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 310 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaag 353
>gb|AY466446.1| Aegilops tauschii clone BAC 22J2 VRN-D1 gene, partial cds Length = 957 Score = 107 bits (54), Expect = 2e-20 Identities = 84/93 (90%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 180 gcaactggagcagcanctggaaagctcactgaaacatatcagagccaggaaggtagtgat 239 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1 gcaactggagcagcagctggaaagctcactgaaacatatcagatccaggaaggtactgac 60 Query: 240 ttaaatgagttgatacagcagcacaatttatat 272 |||||||| ||| ||||||| ||| ||||||| Sbjct: 61 ttaaatgatttg-tacagcaacactttttatat 92
>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211 mRNA, complete cds Length = 1109 Score = 107 bits (54), Expect = 2e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 438 atgggagaggatcttgaatctttgaatctcaaagagctgcagcagctggagcagcagctg 497 Query: 199 gaaagctcactgaaacatatcagagccag 227 |||| || |||||||||||||| |||| Sbjct: 498 gaaaattcgttgaaacatatcagatccag 526 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 388 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaag 431
>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10) mRNA, complete cds Length = 964 Score = 107 bits (54), Expect = 2e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 425 atgggagaggatcttgaatctttgaatctcaaagagctgcagcagctggagcagcagctg 484 Query: 199 gaaagctcactgaaacatatcagagccag 227 |||| || |||||||||||||| |||| Sbjct: 485 gaaaattcgttgaaacatatcagatccag 513 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 375 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaag 418
>emb|AJ430641.1|ZMA430641 Zea mays mRNA for putative MADS-domain transcription factor (m4 gene) Length = 1280 Score = 107 bits (54), Expect = 2e-20 Identities = 83/93 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||| ||||||||||||| ||| | |||||||| |||||||| ||| Sbjct: 637 atgggagaggatcttgaaactttgaatctcaaagagcttcagcaactagagcagcagctg 696 Query: 199 gaaagctcactgaaacatatcagagccaggaag 231 || || |||||||||||||||||| | |||||| Sbjct: 697 gagagttcactgaaacatatcagaacaaggaag 729 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 3 aaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 589 aaactaaaggcgaaggtcgagacaatacagaaatgtcaaaag 630
>emb|AJ430632.1|ZMA430632 Zea mays mRNA for putative MADS-domain transcription factor (m15 gene) Length = 1216 Score = 107 bits (54), Expect = 2e-20 Identities = 83/93 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||| | ||||||||||| ||| | |||||||| |||||||| ||| Sbjct: 633 atgggagaggatcttgaaacgttgaatctcaaagagcttcagcaactagagcagcagctg 692 Query: 199 gaaagctcactgaaacatatcagagccaggaag 231 || || |||||||||||||||||| |||||||| Sbjct: 693 gagagttcactgaaacatatcagaaccaggaag 725 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 3 aaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 585 aaactaaaggcgaaggtcgagacaatacaaaaatgtcaaaag 626
>gb|AF139664.2|AF139664 Oryza sativa FDRMADS6 mRNA, complete cds Length = 1101 Score = 107 bits (54), Expect = 2e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 352 atgggagaggatcttgaatctttgaatctcaaagagctgcagcagctggagcagcagctg 411 Query: 199 gaaagctcactgaaacatatcagagccag 227 |||| || |||||||||||||| |||| Sbjct: 412 gaaaattcgttgaaacatatcagatccag 440 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 302 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaag 345
>gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complete cds Length = 1373 Score = 107 bits (54), Expect = 2e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 624 atgggagaggatcttgaatctttgaatctcaaagagctgcagcagctggagcagcagctg 683 Query: 199 gaaagctcactgaaacatatcagagccag 227 |||| || |||||||||||||| |||| Sbjct: 684 gaaaattcgttgaaacatatcagatccag 712 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 574 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaag 617
>dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N01, full insert sequence Length = 1284 Score = 107 bits (54), Expect = 2e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 644 atgggagaggatcttgaatctttgaatctcaaagagctgcagcagctggagcagcagctg 703 Query: 199 gaaagctcactgaaacatatcagagccag 227 |||| || |||||||||||||| |||| Sbjct: 704 gaaaattcgttgaaacatatcagatccag 732 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 594 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaag 637
>dbj|AB041020.1| Oryza sativa RAP1B mRNA for AP1-like MADS box protein, complete cds Length = 1124 Score = 107 bits (54), Expect = 2e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 342 atgggagaggatcttgaatctttgaatctcaaagagctgcagcagctggagcagcagctg 401 Query: 199 gaaagctcactgaaacatatcagagccag 227 |||| || |||||||||||||| |||| Sbjct: 402 gaaaattcgttgaaacatatcagatccag 430 Score = 79.8 bits (40), Expect = 5e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtcaaaag 44 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 292 ggaaactgaaggctaaggttgagacaatacagaaatgtcaaaag 335
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 101 bits (51), Expect = 1e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 ||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 12185458 cctgcagccatctcatgggagaggatcttgaatctctgaatctcaaagagctgcagcaac 12185399 Query: 185 tggagcagcanctggaaagctcactgaaacatatcagagccaggaaggta 234 ||||| |||| ||| ||| || ||||||||||||| |||| |||||| Sbjct: 12185398 tggagaagcagctgaaaaatacatcgaaacatatcagatccagaaaggta 12185349
>dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_D08 Length = 88854 Score = 101 bits (51), Expect = 1e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 ||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 8919 cctgcagccatctcatgggagaggatcttgaatctctgaatctcaaagagctgcagcaac 8860 Query: 185 tggagcagcanctggaaagctcactgaaacatatcagagccaggaaggta 234 ||||| |||| ||| ||| || ||||||||||||| |||| |||||| Sbjct: 8859 tggagaagcagctgaaaaatacatcgaaacatatcagatccagaaaggta 8810
>ref|XM_465188.1| Oryza sativa (japonica cultivar-group), mRNA Length = 868 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 ||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 525 cctgcagccatctcatgggagaggatcttgaatctctgaatctcaaagagctgcagcaac 466 Query: 185 tggagcagca 194 ||||| |||| Sbjct: 465 tggagaagca 456
>dbj|AK061899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H02, full insert sequence Length = 868 Score = 91.7 bits (46), Expect = 1e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 125 cctgcaggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac 184 ||||||| ||||| ||||||||||||||||||||| |||||||||| ||| ||||||||| Sbjct: 525 cctgcagccatctcatgggagaggatcttgaatctctgaatctcaaagagctgcagcaac 466 Query: 185 tggagcagca 194 ||||| |||| Sbjct: 465 tggagaagca 456
>gb|L46400.1|MZEMADSD Zea mays MADS-box protein (ZAP1) mRNA, complete cds Length = 1345 Score = 83.8 bits (42), Expect = 3e-13 Identities = 80/93 (86%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||| || |||||||||| ||| ||| | |||||||| |||||||| ||| Sbjct: 485 atgggagaggatctagagtctttgaatcccaaagagctccagcaactagagcagcagctg 544 Query: 199 gaaagctcactgaaacatatcagagccaggaag 231 || ||||||||||| || |||||| | |||||| Sbjct: 545 gatagctcactgaagcacatcagatcaaggaag 577
>gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box protein (SbMADS2) mRNA, partial cds Length = 1186 Score = 73.8 bits (37), Expect = 3e-10 Identities = 72/84 (85%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||| || |||||||||| ||| ||| | || ||||| |||||||| ||| Sbjct: 327 atgggagaggatctagagtctttgaatcccaaagagctccaacaactagagcagcagctg 386 Query: 199 gaaagctcactgaaacatatcaga 222 || ||||||||||| || |||||| Sbjct: 387 gagagctcactgaagcacatcaga 410
>gb|AY306190.1| Tradescantia virginiana FRUITFULL-like MADS-box (TvFL1) mRNA, partial cds Length = 723 Score = 67.9 bits (34), Expect = 2e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 130 aggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggag 189 |||||||||||||||||| | |||||| | ||||||||||| || ||||||||||| ||| Sbjct: 313 aggcatcttatgggagagcagcttgaaacattgaatctcaaagaattgcagcaactagag 372 Query: 190 ca 191 || Sbjct: 373 ca 374
>gb|AF112150.1|AF112150 Zea mays MADS box protein 3 (mads3) mRNA, complete cds Length = 1250 Score = 65.9 bits (33), Expect = 7e-08 Identities = 71/84 (84%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||| || |||||||||| || ||| | || ||||| |||||||| ||| Sbjct: 406 atgggagaggatctagagtctttgaatccaaaagagctccaacaactagagcagcagctg 465 Query: 199 gaaagctcactgaaacatatcaga 222 || ||||||||||| || |||||| Sbjct: 466 gagagctcactgaagcacatcaga 489
>gb|AY198327.1| Lolium perenne MADS2 mRNA, complete cds Length = 1083 Score = 56.0 bits (28), Expect = 7e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtca 40 ||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 369 ggaaactgaaggcgaagattgagactatacaaaaatgtca 408
>gb|AY306191.1| Tradescantia virginiana FRUITFULL-like MADS-box (TvFL2) mRNA, partial cds Length = 668 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 130 aggcatcttatgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggag 189 |||||||||||||||||| | || ||| | ||| ||||||| || ||||||||||| ||| Sbjct: 250 aggcatcttatgggagagcaactagaagcgttggatctcaaagaattgcagcaactagag 309 Query: 190 ca 191 || Sbjct: 310 ca 311
>emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box protein 8 (m8 gene) Length = 1203 Score = 50.1 bits (25), Expect = 0.004 Identities = 69/84 (82%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaaggagttgcagcaactggagcagcanctg 198 |||||||||||||| || ||| |||| ||||| || | || |||||||||||||| ||| Sbjct: 379 atgggagaggatctggattctctgaacctcaaagaactccaacaactggagcagcagctg 438 Query: 199 gaaagctcactgaaacatatcaga 222 || || ||| |||| || |||||| Sbjct: 439 gagagttcattgaagcacatcaga 462
>gb|AF035379.1|AF035379 Lolium temulentum MADS-box protein 2 (MADS2) mRNA, alternatively spliced product, complete cds Length = 1062 Score = 48.1 bits (24), Expect = 0.016 Identities = 36/40 (90%) Strand = Plus / Plus Query: 1 ggaaactgaaggcgaaggttgagacaatacagaaatgtca 40 |||| |||||||||||| ||||||| ||||| |||||||| Sbjct: 368 ggaagctgaaggcgaagattgagactatacaaaaatgtca 407
>gb|AY306138.1| Allium sp. AL-2003 FRUITFULL-like MADS-box (AlFL) mRNA, partial cds Length = 699 Score = 44.1 bits (22), Expect = 0.25 Identities = 28/30 (93%) Strand = Plus / Plus Query: 130 aggcatcttatgggagaggatcttgaatct 159 |||||||||||||||||| | ||||||||| Sbjct: 313 aggcatcttatgggagagcaacttgaatct 342
>ref|XM_475574.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3831 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 tgaatctcaaggagttgcagc 181 ||||||||||||||||||||| Sbjct: 1325 tgaatctcaaggagttgcagc 1345
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 tgaatctcaaggagttgcagc 181 ||||||||||||||||||||| Sbjct: 2107458 tgaatctcaaggagttgcagc 2107478
>dbj|AB111428.1| Potamotrygon motoro GARS-AIRS-GART mRNA for glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase, partial cds Length = 3298 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 gtagtgatttaaatgagttgataca 256 ||||||||||| ||||||||||||| Sbjct: 870 gtagtgatttatatgagttgataca 894
>gb|AC151340.2| Xenopus tropicalis clone ISB-362A3, complete sequence Length = 101442 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 aaaagtaatttgtaacgattt 60 ||||||||||||||||||||| Sbjct: 81804 aaaagtaatttgtaacgattt 81824
>gb|AY109034.1| Zea mays PCO141183 mRNA sequence Length = 659 Score = 42.1 bits (21), Expect = 0.99 Identities = 32/36 (88%) Strand = Plus / Plus Query: 187 gagcagcanctggaaagctcactgaaacatatcaga 222 |||||||| ||||| ||||||||||| || |||||| Sbjct: 5 gagcagcagctggagagctcactgaagcacatcaga 40
>emb|AJ535068.1|OSA535068 Oryza sativa (japonica cultivar-group) mdr3 gene for MDR-like ABC transporter, exons 1-10 Length = 5693 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 tgaatctcaaggagttgcagc 181 ||||||||||||||||||||| Sbjct: 2337 tgaatctcaaggagttgcagc 2357
>gb|AC151309.2| Xenopus tropicalis clone CH216-97A24, complete sequence Length = 103750 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 aaaagtaatttgtaacgattt 60 ||||||||||||||||||||| Sbjct: 100162 aaaagtaatttgtaacgattt 100142
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 tgaatctcaaggagttgcagc 181 ||||||||||||||||||||| Sbjct: 74299 tgaatctcaaggagttgcagc 74319
>gb|AC166346.5| Mus musculus BAC clone RP24-83P13 from chromosome 16, complete sequence Length = 199678 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tcagagccaggaaggtagtg 237 |||||||||||||||||||| Sbjct: 14980 tcagagccaggaaggtagtg 14999
>gb|AC166832.2| Mus musculus BAC clone RP23-220N17 from chromosome 16, complete sequence Length = 172644 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tcagagccaggaaggtagtg 237 |||||||||||||||||||| Sbjct: 45710 tcagagccaggaaggtagtg 45729
>ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 |||||||||||||| ||||| |||||||||| Sbjct: 337 atgggagaggatctagaatccctgaatctcaa 368
>gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS215 mRNA, complete cds Length = 1136 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 |||||||||||||| ||||| |||||||||| Sbjct: 504 atgggagaggatctagaatccctgaatctcaa 535
>emb|CR751605.10| Zebrafish DNA sequence from clone DKEY-25J15 in linkage group 14, complete sequence Length = 145610 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 93246 gaatctcaaggagttgcagc 93227
>emb|CR388005.16| Zebrafish DNA sequence from clone DKEY-162B23 in linkage group 1, complete sequence Length = 197480 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 123341 gaatctcaaggagttgcagc 123322
>emb|CR788254.10| Zebrafish DNA sequence from clone DKEY-82K12 in linkage group 2, complete sequence Length = 227206 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 100004 gaatctcaaggagttgcagc 99985
>emb|CR854931.8| Zebrafish DNA sequence from clone DKEY-30P2 in linkage group 14, complete sequence Length = 203332 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 145780 gaatctcaaggagttgcagc 145799
>emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in linkage group 14, complete sequence Length = 207245 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 151287 gaatctcaaggagttgcagc 151306
>emb|CR854933.8| Zebrafish DNA sequence from clone DKEY-48H17 in linkage group 14, complete sequence Length = 190712 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 61336 gaatctcaaggagttgcagc 61317
>gb|AC121807.3| Mus musculus BAC clone RP23-448N11 from chromosome 16, complete sequence Length = 178155 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 ctgcaggcatcttatgggagagga 149 |||||||| ||||||||||||||| Sbjct: 144771 ctgcaggcttcttatgggagagga 144794
>gb|AC131702.3| Mus musculus BAC clone RP24-177J5 from chromosome 7, complete sequence Length = 154632 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tggaaagctcactgaaacat 216 |||||||||||||||||||| Sbjct: 98546 tggaaagctcactgaaacat 98565
>emb|CR381650.15| Zebrafish DNA sequence from clone CH211-129F24 in linkage group 7, complete sequence Length = 137625 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 78391 gaatctcaaggagttgcagc 78372
>emb|CR846087.30| Zebrafish DNA sequence from clone DKEY-196N19 in linkage group 8, complete sequence Length = 232595 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 189142 gaatctcaaggagttgcagc 189161
>emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in linkage group 19, complete sequence Length = 237649 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 104006 gaatctcaaggagttgcagc 104025
>emb|CR936240.10| Zebrafish DNA sequence from clone DKEY-233K19 in linkage group 16, complete sequence Length = 169758 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 414 gaatctcaaggagttgcagc 433
>emb|CR533578.7| Zebrafish DNA sequence from clone CH211-216F21 in linkage group 16, complete sequence Length = 214872 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 48259 gaatctcaaggagttgcagc 48240
>emb|CR388143.6| Zebrafish DNA sequence from clone DKEY-189O20 in linkage group 21, complete sequence Length = 243457 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 28734 gaatctcaaggagttgcagc 28753
>emb|AL732562.8| Zebrafish DNA sequence from clone CH211-103D22 in linkage group 10 Contains the 3' part of the cxadr gene (coxsackie virus and adenovirus receptor), a novel gene similar to AUTS2 (autism-related protein 1) and four CpG islands, complete sequence Length = 187365 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 167314 gaatctcaaggagttgcagc 167333
>emb|CR790377.18| Zebrafish DNA sequence from clone CH211-260M3 in linkage group 3, complete sequence Length = 147590 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 27279 gaatctcaaggagttgcagc 27298
>emb|BX936382.9| Zebrafish DNA sequence from clone CH211-223A21 in linkage group 3, complete sequence Length = 162342 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 27695 gaatctcaaggagttgcagc 27714
>emb|BX640548.14| Zebrafish DNA sequence from clone CH211-198E12 in linkage group 11, complete sequence Length = 231587 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 199581 gaatctcaaggagttgcagc 199562
>emb|CR788302.6| Zebrafish DNA sequence from clone DKEYP-38A10, complete sequence Length = 172778 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 37709 gaatctcaaggagttgcagc 37728
>emb|CR391977.5| Zebrafish DNA sequence from clone DKEYP-73B11 in linkage group 25, complete sequence Length = 189510 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 70861 gaatctcaaggagttgcagc 70880
>emb|BX640406.9| Zebrafish DNA sequence from clone DKEY-187A3 in linkage group 13, complete sequence Length = 149208 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 134353 gaatctcaaggagttgcagc 134372
>emb|CR536621.7| Zebrafish DNA sequence from clone CH211-158M1, complete sequence Length = 155945 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 68641 gaatctcaaggagttgcagc 68622
>emb|CR749165.5| Zebrafish DNA sequence from clone DKEY-9F14 in linkage group 5, complete sequence Length = 61537 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 55561 gaatctcaaggagttgcagc 55580
>emb|BX465838.15| Zebrafish DNA sequence from clone DKEY-11J8 in linkage group 17, complete sequence Length = 229940 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 134647 gaatctcaaggagttgcagc 134628
>emb|BX571665.6| Zebrafish DNA sequence from clone CH211-276E8 in linkage group 20 Contains the 5' end of the gene for a novel protein similar to vertebrate ring finger protein 144 (RNF144), the gene for a novel radical SAM superfamily protein, the gene for a novel protein similar to mouse thymidylate kinase family LPS-inducible member (Tyki) and a CpG island, complete sequence Length = 166885 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 121983 gaatctcaaggagttgcagc 122002
>emb|AL672044.7| Zebrafish DNA sequence from clone BUSM1-209D10 in linkage group 17 Contains the 3' part of a novel gene and a CpG island, complete sequence Length = 60648 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 26212 gaatctcaaggagttgcagc 26193
>emb|AL929329.2| Zebrafish DNA sequence from clone BUSM1-44F21 in linkage group 7 Contains four CpG islands, complete sequence Length = 75828 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 44286 gaatctcaaggagttgcagc 44267
>emb|BX936461.17| Zebrafish DNA sequence from clone CH211-14A11 in linkage group 20, complete sequence Length = 103791 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 23695 gaatctcaaggagttgcagc 23714
>emb|BX571949.19| Zebrafish DNA sequence from clone DKEY-25F1 in linkage group 11, complete sequence Length = 149012 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 146488 gaatctcaaggagttgcagc 146507
>emb|BX530064.8| Zebrafish DNA sequence from clone CH211-232M19 in linkage group 16, complete sequence Length = 153572 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 39332 gaatctcaaggagttgcagc 39313
>emb|CR354432.6| Zebrafish DNA sequence from clone CH211-66E2 in linkage group 3, complete sequence Length = 193960 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 129461 gaatctcaaggagttgcagc 129480
>emb|BX572634.7| Zebrafish DNA sequence from clone DKEY-6H1 in linkage group 11, complete sequence Length = 202461 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 53395 gaatctcaaggagttgcagc 53414
>emb|BX936343.9| Zebrafish DNA sequence from clone CH211-51C14 in linkage group 3, complete sequence Length = 160177 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 53361 gaatctcaaggagttgcagc 53342
>emb|BX005438.16| Zebrafish DNA sequence from clone DKEY-3E9 in linkage group 9, complete sequence Length = 124192 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 71584 gaatctcaaggagttgcagc 71603
>emb|BX649488.9| Zebrafish DNA sequence from clone DKEY-21O6 in linkage group 22, complete sequence Length = 183230 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 85214 gaatctcaaggagttgcagc 85233
>emb|BX928757.9| Zebrafish DNA sequence from clone CH211-74M19 in linkage group 1, complete sequence Length = 152155 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 144110 gaatctcaaggagttgcagc 144091
>emb|BX323597.9| Zebrafish DNA sequence from clone CH211-227N13 in linkage group 11, complete sequence Length = 177773 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 49633 gaatctcaaggagttgcagc 49652
>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13, complete sequence Length = 193538 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 115432 gaatctcaaggagttgcagc 115413
>ref|XM_693963.1| PREDICTED: Danio rerio similar to thymidylate kinase family LPS-inducible member (LOC570478), mRNA Length = 3045 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 2367 gaatctcaaggagttgcagc 2386
>emb|BX548025.9| Zebrafish DNA sequence from clone DKEY-237J22 in linkage group 9, complete sequence Length = 134425 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 108367 gaatctcaaggagttgcagc 108348
>emb|CR388161.7| Zebrafish DNA sequence from clone CH211-288B17 in linkage group 18, complete sequence Length = 80508 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 58590 gaatctcaaggagttgcagc 58571
>ref|XM_693439.1| PREDICTED: Danio rerio similar to echinoderm microtubule associated protein like 5 (LOC570011), mRNA Length = 6162 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 1794 gaatctcaaggagttgcagc 1813
>emb|BX571983.11| Zebrafish DNA sequence from clone DKEY-18M7 in linkage group 11, complete sequence Length = 248929 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 246405 gaatctcaaggagttgcagc 246424
>emb|BX324182.13| Zebrafish DNA sequence from clone CH211-207F21 in linkage group 19, complete sequence Length = 132675 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 102047 gaatctcaaggagttgcagc 102066
>gb|AF345911.1|AF345911 Oryza sativa MADS-box protein FDRMADS3 mRNA, complete cds Length = 1347 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 |||||||||||||| ||||| |||||||||| Sbjct: 461 atgggagaggatctagaatccctgaatctcaa 492
>emb|BX510647.10| Zebrafish DNA sequence from clone CH211-87N9 in linkage group 5, complete sequence Length = 198695 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 76190 gaatctcaaggagttgcagc 76209
>emb|BX649265.5| Zebrafish DNA sequence from clone CH211-134G22 in linkage group 16, complete sequence Length = 178901 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 39066 gaatctcaaggagttgcagc 39047
>emb|BX571981.5| Zebrafish DNA sequence from clone DKEY-31J3 in linkage group 14, complete sequence Length = 258091 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 215554 gaatctcaaggagttgcagc 215535
>emb|BX548166.7| Zebrafish DNA sequence from clone CH211-280G5 in linkage group 10, complete sequence Length = 166449 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 107131 gaatctcaaggagttgcagc 107150
>emb|BX470178.13| Zebrafish DNA sequence from clone CH211-285K18, complete sequence Length = 166954 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 94204 gaatctcaaggagttgcagc 94223
>emb|BX649421.8| Zebrafish DNA sequence from clone DKEY-8O9 in linkage group 14, complete sequence Length = 184905 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 76735 gaatctcaaggagttgcagc 76716
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 |||||||||||||| ||||| |||||||||| Sbjct: 472239 atgggagaggatctagaatccctgaatctcaa 472208
>gb|AF345246.1|AF345246 Ipomoea batatas MADS box transcription factor (MADS3) mRNA, complete cds Length = 912 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 aggagttgcagcaactggag 189 |||||||||||||||||||| Sbjct: 365 aggagttgcagcaactggag 384
>emb|BX248401.10| Zebrafish DNA sequence from clone CH211-233P10, complete sequence Length = 144874 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 140159 gaatctcaaggagttgcagc 140178
>emb|BX855590.3| Zebrafish DNA sequence from clone CH211-245N8, complete sequence Length = 179373 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 29310 gaatctcaaggagttgcagc 29291
>emb|BX323067.11| Zebrafish DNA sequence from clone CH211-277B21 in linkage group 24, complete sequence Length = 152092 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 23725 gaatctcaaggagttgcagc 23706
>emb|BX649354.2| Zebrafish DNA sequence from clone DKEY-20C12 in linkage group 1, complete sequence Length = 35109 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 32588 gaatctcaaggagttgcagc 32607
>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22, complete sequence Length = 165445 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 118339 gaatctcaaggagttgcagc 118320
>emb|BX571825.6| Zebrafish DNA sequence from clone DKEY-158E13 in linkage group 18, complete sequence Length = 200814 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 126478 gaatctcaaggagttgcagc 126497
>emb|BX294131.7| Zebrafish DNA sequence from clone CH211-254O18, complete sequence Length = 164141 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 42575 gaatctcaaggagttgcagc 42594
>emb|BX119954.10| Zebrafish DNA sequence from clone CH211-286O14, complete sequence Length = 155287 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 72567 gaatctcaaggagttgcagc 72548
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 |||||||||||||| ||||| |||||||||| Sbjct: 74403 atgggagaggatctagaatccctgaatctcaa 74372
>emb|BX539310.9| Zebrafish DNA sequence from clone DKEY-19C16 in linkage group 20, complete sequence Length = 238530 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 161020 gaatctcaaggagttgcagc 161039
>emb|BX571948.8| Zebrafish DNA sequence from clone DKEY-185P13 in linkage group 22, complete sequence Length = 184751 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 135018 gaatctcaaggagttgcagc 135037
>emb|BX005026.10| Zebrafish DNA sequence from clone DKEY-11J5, complete sequence Length = 154034 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 75632 gaatctcaaggagttgcagc 75613
>emb|AL929090.4| Zebrafish DNA sequence from clone CH211-14A14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 15455 gaatctcaaggagttgcagc 15436
>gb|AF058698.1|AF058698 Oryza sativa MADS15 protein mRNA, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 ||||||||||||| |||||| |||||||||| Sbjct: 455 atgggagaggatcatgaatccctgaatctcaa 486
>dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K24, full insert sequence Length = 2563 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 |||||||||||||| ||||| |||||||||| Sbjct: 1853 atgggagaggatctagaatccctgaatctcaa 1884
>emb|BX248246.11| Zebrafish DNA sequence from clone CH211-122H15 in linkage group 20, complete sequence Length = 176239 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 43980 gaatctcaaggagttgcagc 43961
>emb|CR925763.5| Zebrafish DNA sequence from clone CH211-267K22 in linkage group 19, complete sequence Length = 109265 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 2755 gaatctcaaggagttgcagc 2774
>emb|BX510657.9| Zebrafish DNA sequence from clone CH211-142K18 in linkage group 20, complete sequence Length = 163967 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 78922 gaatctcaaggagttgcagc 78903
>emb|BX321877.7| Zebrafish DNA sequence from clone DKEYP-27B10 in linkage group 18, complete sequence Length = 127643 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 69179 gaatctcaaggagttgcagc 69160
>emb|BX284679.5| Zebrafish DNA sequence from clone CH211-13N20 in linkage group 20, complete sequence Length = 105328 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 84568 gaatctcaaggagttgcagc 84549
>emb|BX255967.4| Zebrafish DNA sequence from clone CH211-191G22 in linkage group 7, complete sequence Length = 146969 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 135857 gaatctcaaggagttgcagc 135838
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 |||||||||||||| ||||| |||||||||| Sbjct: 26151 atgggagaggatctagaatccctgaatctcaa 26120
>emb|CR556712.11| Zebrafish DNA sequence from clone DKEY-28E7 in linkage group 11, complete sequence Length = 112718 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 30592 gaatctcaaggagttgcagc 30611
>gb|AY109845.1| Zea mays CL2300_1 mRNA sequence Length = 1488 Score = 40.1 bits (20), Expect = 3.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatc 166 |||||||||||||| || |||||||||| Sbjct: 485 atgggagaggatctagagtctttgaatc 512
>emb|BX005103.4| Zebrafish DNA sequence from clone CH211-149O7 in linkage group 25, complete sequence Length = 150295 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 121958 gaatctcaaggagttgcagc 121939
>emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in linkage group 1, complete sequence Length = 272535 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 36673 gaatctcaaggagttgcagc 36692
>dbj|AB054255.1| Ipomoea batatas IbMADS3 mRNA , complete cds Length = 912 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 aggagttgcagcaactggag 189 |||||||||||||||||||| Sbjct: 365 aggagttgcagcaactggag 384
>emb|BX324126.12| Zebrafish DNA sequence from clone CH211-42I6 in linkage group 23, complete sequence Length = 60690 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 39003 gaatctcaaggagttgcagc 38984
>gb|AC147719.1| Gallus gallus BAC clone CH261-22J12 from chromosome unknown, complete sequence Length = 192198 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 atacagcagcacaatttata 271 |||||||||||||||||||| Sbjct: 126556 atacagcagcacaatttata 126537
>emb|CR450823.9| Zebrafish DNA sequence from clone CH211-241M2 in linkage group 11, complete sequence Length = 73433 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 48197 gaatctcaaggagttgcagc 48216
>emb|CR354395.20| Zebrafish DNA sequence from clone DKEYP-45G11 in linkage group 12, complete sequence Length = 160211 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 108358 gaatctcaaggagttgcagc 108377
>emb|CR376852.17| Zebrafish DNA sequence from clone CH211-181B18 in linkage group 21, complete sequence Length = 157717 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 45353 gaatctcaaggagttgcagc 45372
>emb|AL935140.6| Zebrafish DNA sequence from clone DKEYP-122E7 in linkage group 9, complete sequence Length = 83763 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 gaatctcaaggagttgcagc 181 |||||||||||||||||||| Sbjct: 4161 gaatctcaaggagttgcagc 4142
>emb|AL671913.10| Mouse DNA sequence from clone RP23-136P3 on chromosome 4, complete sequence Length = 220940 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 atttaaatgagttgatacag 257 |||||||||||||||||||| Sbjct: 213325 atttaaatgagttgatacag 213306
>dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like protein, complete cds, clone:E31864 Length = 1289 Score = 40.1 bits (20), Expect = 3.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 139 atgggagaggatcttgaatctttgaatctcaa 170 |||||||||||||| ||||| |||||||||| Sbjct: 461 atgggagaggatctagaatccctgaatctcaa 492 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,857,731 Number of Sequences: 3902068 Number of extensions: 2857731 Number of successful extensions: 52367 Number of sequences better than 10.0: 201 Number of HSP's better than 10.0 without gapping: 201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51923 Number of HSP's gapped (non-prelim): 393 length of query: 299 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 277 effective length of database: 17,147,199,772 effective search space: 4749774336844 effective search space used: 4749774336844 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)