Clone Information

BLAST Search Result

Clone Name	baal11m09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL18_ARATH (P42791) 60S ribosomal protein L18	297	1e-80
2	RL18_CICAR (O65729) 60S ribosomal protein L18 (Fragment)	278	1e-74
3	RL18_HUMAN (Q07020) 60S ribosomal protein L18	236	4e-62
4	RL18_RAT (P12001) 60S ribosomal protein L18	234	1e-61
5	RL18_MOUSE (P35980) 60S ribosomal protein L18	234	2e-61
6	RL18_ORENI (P69091) 60S ribosomal protein L18	233	3e-61
7	RL18_OREMO (P69090) 60S ribosomal protein L18	233	3e-61
8	RL18_ICTPU (Q90YV0) 60S ribosomal protein L18	231	1e-60
9	RL18B_XENLA (P02412) 60S ribosomal protein L18-B (L14B)	231	2e-60
10	RL18A_XENLA (P09897) 60S ribosomal protein L18-A (L14A)	226	3e-59
11	RL18B_SCHPO (Q8TFH1) 60S ribosomal protein L18-B	211	1e-54
12	RL18A_SCHPO (Q10192) 60S ribosomal protein L18-A	211	2e-54
13	RL18_YEAST (P07279) 60S ribosomal protein L18 (RP28)	207	3e-53
14	RL18_TRYBB (P50885) 60S ribosomal protein L18	185	1e-46
15	RL18_SALSA (P24558) 60S ribosomal protein L18	129	5e-30
16	RL18_PIG (Q95342) 60S ribosomal protein L18 (Fragment)	119	7e-27
17	RL18E_PYRAB (Q9V197) 50S ribosomal protein L18e	51	3e-06
18	RL18E_PYRKO (Q5JJF5) 50S ribosomal protein L18e	49	9e-06
19	RL18E_PYRHO (O59302) 50S ribosomal protein L18e	46	8e-05
20	RL18E_PYRFU (Q8U0E5) 50S ribosomal protein L18e	46	8e-05
21	RL18E_METJA (P54022) 50S ribosomal protein L18e	46	1e-04
22	RL18E_METTH (O26145) 50S ribosomal protein L18e	45	2e-04
23	RL18E_METKA (Q8TVB7) 50S ribosomal protein L18e	42	0.001
24	RL18E_ARCFU (O29138) 50S ribosomal protein L18e	36	0.10
25	RL18E_METMP (Q6LXM7) 50S ribosomal protein L18e	35	0.13
26	MCM1_YEAST (P11746) Pheromone receptor transcription factor (GRM...	35	0.23
27	RL18E_PYRAE (Q8ZYQ2) 50S ribosomal protein L18e	34	0.30
28	RL18E_METMA (Q8PW46) 50S ribosomal protein L18e	33	0.87
29	KCNN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassi...	32	1.1
30	RL18E_THEAC (Q9HL06) 50S ribosomal protein L18e	32	1.5
31	RL18E_METAC (Q8TT44) 50S ribosomal protein L18e	32	1.5
32	MURD_RHILO (Q98KB1) UDP-N-acetylmuramoylalanine--D-glutamate lig...	32	1.9
33	GDB0_WHEAT (P08079) Gamma-gliadin precursor (Fragment)	32	1.9
34	BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6...	32	1.9
35	GDBX_WHEAT (P21292) Gamma-gliadin precursor	31	2.5
36	GDBB_WHEAT (P06659) Gamma-gliadin B precursor	31	2.5
37	GDB2_WHEAT (P08453) Gamma-gliadin precursor	30	4.3
38	AMPA_CLOPE (Q8XHI3) Probable cytosol aminopeptidase (EC 3.4.11.1...	30	4.3
39	MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)	30	5.7
40	NPDC1_MOUSE (Q64322) Neural proliferation differentiation and co...	30	5.7
41	PO6F2_HUMAN (P78424) POU domain, class 6, transcription factor 2...	30	5.7
42	HOXV_AZOVI (P40597) Hydrogenase expression/formation protein hoxV	30	5.7
43	HUPK_AZOVI (P31878) Hydrogenase expression/formation protein hupK	30	5.7
44	TIM50_YARLI (Q6CDV7) Import inner membrane translocase subunit T...	30	7.4
45	SSH1_HUMAN (Q8WYL5) Protein phosphatase Slingshot homolog 1 (EC ...	30	7.4
46	CUT_DROME (P10180) Homeobox protein cut	30	7.4
47	PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101	30	7.4
48	LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 prote...	30	7.4
49	PACC_GIBMO (Q873X0) pH-response transcription factor pacC/RIM101	30	7.4
50	IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2	30	7.4
51	PHYK_MAIZE (Q2N2K4) Probable phytol kinase, chloroplast precurso...	30	7.4
52	PHYK2_SOYBN (Q2N2K2) Probable phytol kinase 2, chloroplast precu...	30	7.4
53	VID21_USTMA (Q4P209) Chromatin modification-related protein VID21	29	9.7
54	SE3AA_BRARE (Q9W7J1) Semaphorin-3aa precursor (Semaphorin-1A) (S...	29	9.7
55	DPLD_DROME (Q9V4M2) Protein dappled	29	9.7
56	KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase ty...	29	9.7
57	MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia p...	29	9.7
58	ISPD_ARATH (P69834) 2-C-methyl-D-erythritol 4-phosphate cytidyly...	29	9.7
59	TRHY_RABIT (P37709) Trichohyalin	29	9.7
60	NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleo...	29	9.7
61	NRX3A_RAT (Q07310) Neurexin-3-alpha precursor (Neurexin III-alpha)	29	9.7

>RL18_ARATH (P42791) 60S ribosomal protein L18|
          Length = 187

 Score =  297 bits (761), Expect = 1e-80
 Identities = 147/181 (81%), Positives = 164/181 (90%)
 Frame = +2

Query: 71  MGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRP 250
           MGIDL+AGG++K+TKR APKSDDVYLKL VKLYRFLVRRT SKFN VILKRLFMSK N+ 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 251 PLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGEC 430
           PLS+ RL  FM GKE+K IAV+VGTITDD+R+ EIPAMKVTALRFTE ARARI  AGGEC
Sbjct: 61  PLSLSRLVEFMTGKEDK-IAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGEC 119

Query: 431 LTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 610
           LTFDQLALRAP G+NT+LLRGPKN+REAV+HFG APGVPHSH+KPYVR+KGRKFEKARG+
Sbjct: 120 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGK 179

Query: 611 R 613
           R
Sbjct: 180 R 180

to top

>RL18_CICAR (O65729) 60S ribosomal protein L18 (Fragment)|
          Length = 183

 Score =  278 bits (710), Expect = 1e-74
 Identities = 139/178 (78%), Positives = 157/178 (88%)
 Frame = +2

Query: 80  DLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLS 259
           DL AGG+NK+TKR +PKS+D+YLKLLVKLYRFLVRRT S FNAVILKRLFMSK NRPPLS
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 260 MRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTF 439
           + RL  +M+GKE K I VVVG +TDD+R+ ++P +KVTAL+FTETARARI  AGGECLTF
Sbjct: 61  LSRLIKYMQGKEGK-IGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTF 119

Query: 440 DQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 613
           DQLALR P   +T+LLRGPKNAREAV+HFG APGVPHSHTKPYVRSKGRKFEKARGRR
Sbjct: 120 DQLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 176

to top

>RL18_HUMAN (Q07020) 60S ribosomal protein L18|
          Length = 187

 Score =  236 bits (602), Expect = 4e-62
 Identities = 119/182 (65%), Positives = 144/182 (79%), Gaps = 2/182 (1%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           G+D +   ++++ +R  PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1   GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59

Query: 254 LSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGE 427
           LS+ R+   MK  G+E K  AVVVGTITDD+R+QE+P +KV ALR T  AR+RI+ AGG+
Sbjct: 60  LSLSRMIRKMKLPGRENKT-AVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 118

Query: 428 CLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
            LTFDQLAL +P G  T+LL GP+  RE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 119 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 178

Query: 608 RR 613
           RR
Sbjct: 179 RR 180

to top

>RL18_RAT (P12001) 60S ribosomal protein L18|
          Length = 187

 Score =  234 bits (598), Expect = 1e-61
 Identities = 118/182 (64%), Positives = 143/182 (78%), Gaps = 2/182 (1%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           G+D +   ++++ +R  PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1   GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59

Query: 254 LSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGE 427
           LS+ R+   MK  G+E K  AVVVGTITDD+RI E+P +KV ALR +  AR+RI+ AGG+
Sbjct: 60  LSLSRMIRKMKLPGRENKT-AVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGK 118

Query: 428 CLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
            LTFDQLAL +P G  T+LL GP+  RE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 119 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 178

Query: 608 RR 613
           RR
Sbjct: 179 RR 180

to top

>RL18_MOUSE (P35980) 60S ribosomal protein L18|
          Length = 187

 Score =  234 bits (597), Expect = 2e-61
 Identities = 117/182 (64%), Positives = 143/182 (78%), Gaps = 2/182 (1%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           G+D +   ++++ +R  PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1   GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 59

Query: 254 LSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGE 427
           LS+ R+   MK  G+E K  AVVVGT+TDD+RI E+P +KV ALR +  AR+RI+ AGG+
Sbjct: 60  LSLSRMIRKMKLPGRENKT-AVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGK 118

Query: 428 CLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
            LTFDQLAL +P G  T+LL GP+  RE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 119 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 178

Query: 608 RR 613
           RR
Sbjct: 179 RR 180

to top

>RL18_ORENI (P69091) 60S ribosomal protein L18|
          Length = 187

 Score =  233 bits (595), Expect = 3e-61
 Identities = 115/182 (63%), Positives = 146/182 (80%), Gaps = 2/182 (1%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           G+D +   ++++  R  PKS D+YL+LLVKLYRFL RR+ + FN V+L+RLFMS+TNRPP
Sbjct: 1   GVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPP 59

Query: 254 LSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGE 427
           +++ RL   MK  G+E K IAVVVGT+TDD+RIQ+IP +K+ ALR T+ AR RI+ AGG+
Sbjct: 60  IAVSRLIRKMKLPGRENK-IAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQ 118

Query: 428 CLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
            +TFDQLAL +P G+ T+LL GP+ ARE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 119 VMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 178

Query: 608 RR 613
           RR
Sbjct: 179 RR 180

to top

>RL18_OREMO (P69090) 60S ribosomal protein L18|
          Length = 187

 Score =  233 bits (595), Expect = 3e-61
 Identities = 115/182 (63%), Positives = 146/182 (80%), Gaps = 2/182 (1%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           G+D +   ++++  R  PKS D+YL+LLVKLYRFL RR+ + FN V+L+RLFMS+TNRPP
Sbjct: 1   GVD-IRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPP 59

Query: 254 LSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGE 427
           +++ RL   MK  G+E K IAVVVGT+TDD+RIQ+IP +K+ ALR T+ AR RI+ AGG+
Sbjct: 60  IAVSRLIRKMKLPGRENK-IAVVVGTVTDDVRIQDIPKLKICALRVTDGARRRILKAGGQ 118

Query: 428 CLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
            +TFDQLAL +P G+ T+LL GP+ ARE  RHFGKAPG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 119 VMTFDQLALASPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 178

Query: 608 RR 613
           RR
Sbjct: 179 RR 180

to top

>RL18_ICTPU (Q90YV0) 60S ribosomal protein L18|
          Length = 187

 Score =  231 bits (590), Expect = 1e-60
 Identities = 117/182 (64%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           G+D +   ++++  R  PKS D+YL+LLVKLYRFL RR+ + FN V+LKRLFMSKTNRPP
Sbjct: 1   GVD-IRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRPP 59

Query: 254 LSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGE 427
           L++ RL   MK  G+E K IAVVVGTITDD+RI  IP +KV ALR T  AR RI+ AGG+
Sbjct: 60  LALSRLIRKMKLQGRENK-IAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQ 118

Query: 428 CLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
            +TFDQLA+  P G+ T+LL GP+ ARE  RHFGKAPG PHSHTKPY+RSKGRKFE+ARG
Sbjct: 119 VMTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYIRSKGRKFERARG 178

Query: 608 RR 613
           RR
Sbjct: 179 RR 180

to top

>RL18B_XENLA (P02412) 60S ribosomal protein L18-B (L14B)|
          Length = 187

 Score =  231 bits (588), Expect = 2e-60
 Identities = 118/182 (64%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           GID +   ++++ +R  PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1   GID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPP 59

Query: 254 LSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGE 427
           LSM RL   MK  G+E K  AVVVG ITDD+RI +IP +KV AL+ T   R+RI+ +GG+
Sbjct: 60  LSMSRLIRKMKLQGRENKT-AVVVGYITDDVRIHDIPKLKVCALKITSGDRSRILKSGGQ 118

Query: 428 CLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
            +TFDQLAL AP G+NT+LL GP+ ARE  RHFGKAPG PHS TKPYV SKGRKFE+ARG
Sbjct: 119 IMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARG 178

Query: 608 RR 613
           RR
Sbjct: 179 RR 180

to top

>RL18A_XENLA (P09897) 60S ribosomal protein L18-A (L14A)|
          Length = 187

 Score =  226 bits (577), Expect = 3e-59
 Identities = 115/181 (63%), Positives = 138/181 (76%), Gaps = 1/181 (0%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           GID +   ++++ +R  PKS D+YL+LLVKLYRFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1   GID-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPP 59

Query: 254 LSMRRLSNFMK-GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGEC 430
           LSM RL   MK  + E   AVVVG IT D+RI +IP + V AL+ T  AR+RI+ AGG+ 
Sbjct: 60  LSMSRLIRKMKLPRRENKTAVVVGCITADVRIHDIPKLTVCALKLTSGARSRILKAGGQI 119

Query: 431 LTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 610
           +TFDQLAL AP G+NT+LL GP+ ARE  RHFGKAP  PHS TKPYV SKGRKFE+ARGR
Sbjct: 120 MTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPSTPHSRTKPYVLSKGRKFERARGR 179

Query: 611 R 613
           R
Sbjct: 180 R 180

to top

>RL18B_SCHPO (Q8TFH1) 60S ribosomal protein L18-B|
          Length = 187

 Score =  211 bits (538), Expect = 1e-54
 Identities = 111/184 (60%), Positives = 136/184 (73%), Gaps = 3/184 (1%)
 Frame = +2

Query: 71  MGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRP 250
           MGID +     ++++R  P S++VYLKLLVKLYRFL RRT S+FN  ILKRLF SKTNRP
Sbjct: 1   MGID-IERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59

Query: 251 PLSMRRLSNFMKGKE---EKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAG 421
           P+S+ +++     K    E    V+VGT+TDD R+  +P + V ALRFT++ARARI+ AG
Sbjct: 60  PISISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTKSARARILKAG 119

Query: 422 GECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 601
           GE LT DQLALRAPTG NT+LLRG K+AREA RHFG     PH H  PYVRS+GRKFE+A
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERA 176

Query: 602 RGRR 613
           RGRR
Sbjct: 177 RGRR 180

to top

>RL18A_SCHPO (Q10192) 60S ribosomal protein L18-A|
          Length = 187

 Score =  211 bits (536), Expect = 2e-54
 Identities = 110/184 (59%), Positives = 136/184 (73%), Gaps = 3/184 (1%)
 Frame = +2

Query: 71  MGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRP 250
           MGID +     K+++R  P S++VYLKLLVKLYRFL RRT S+FN  ILKRLF SKTNRP
Sbjct: 1   MGID-IERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRP 59

Query: 251 PLSMRRLSNFMKGKE---EKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAG 421
           P+S+ +++     K    +    VVVGT+TDD R+  +P + + ALRFT++ARARI+ AG
Sbjct: 60  PISISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTKSARARILKAG 119

Query: 422 GECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 601
           GE LT DQLALRAPTG NT+L+RG K+AREA RHFG     PH H  PYVRS+GRKFE+A
Sbjct: 120 GEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERA 176

Query: 602 RGRR 613
           RGRR
Sbjct: 177 RGRR 180

to top

>RL18_YEAST (P07279) 60S ribosomal protein L18 (RP28)|
          Length = 186

 Score =  207 bits (526), Expect = 3e-53
 Identities = 108/182 (59%), Positives = 131/182 (71%), Gaps = 1/182 (0%)
 Frame = +2

Query: 71  MGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRP 250
           MGID  +    +   R APKSD+VYLKLLVKLY FL RRT + FN V+LK LF+SK NRP
Sbjct: 1   MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60

Query: 251 PLSMRRLSNFMKGKEEKN-IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGE 427
           P+S+ R++  +K +   N   VVVGT+TDD RI E P   V ALRFT  ARA+IV AGGE
Sbjct: 61  PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120

Query: 428 CLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
           C+T DQLA+RAP G+NT++LRGP+N+REAVRHFG     PH    P + S GRKFE+ARG
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFERARG 177

Query: 608 RR 613
           RR
Sbjct: 178 RR 179

to top

>RL18_TRYBB (P50885) 60S ribosomal protein L18|
          Length = 193

 Score =  185 bits (469), Expect = 1e-46
 Identities = 96/189 (50%), Positives = 135/189 (71%), Gaps = 7/189 (3%)
 Frame = +2

Query: 71  MGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRP 250
           MG+DL    + KR  R    S + Y+KLL+KLY+FL +RT S FN +I KRL  S+ NR 
Sbjct: 1   MGVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLGKRTNSPFNKLIHKRLLKSRNNRA 60

Query: 251 PLS-------MRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARI 409
           P+S       MRR + ++K  ++  IAV+VG + DD+R+  IPA+++ ALRF+++AR RI
Sbjct: 61  PISLSRIAVCMRRRTVWLKKGKKSPIAVIVGDVLDDVRMTRIPALRICALRFSKSARERI 120

Query: 410 VNAGGECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRK 589
             AGGECLTFDQLA+ APTG+NT+LLRG K+ RE+V+HFG A GVP SH KP+V S+G++
Sbjct: 121 TGAGGECLTFDQLAMMAPTGKNTMLLRGRKSGRESVKHFG-AAGVPGSHAKPHVSSRGKE 179

Query: 590 FEKARGRRN 616
            +++  RR+
Sbjct: 180 RQRSSKRRH 188

to top

>RL18_SALSA (P24558) 60S ribosomal protein L18|
          Length = 179

 Score =  129 bits (325), Expect = 5e-30
 Identities = 78/172 (45%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
 Frame = +2

Query: 71  MGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRR-TKSKFNAVILKRLFMSKTNR 247
           MGI ++   +++  +   P S+D+   LLVK+YR    + + + FN V+L+RLFMS+T+R
Sbjct: 1   MGI-VIQHNKDRLVRPKQPLSEDI--TLLVKIYRLPGSKCSTAPFNKVVLRRLFMSRTHR 57

Query: 248 PPLSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAG 421
           PP+S+ R+   MK  G+E +  AVVVGT+TDD+RI EIP +KV+AL+ T   R RI+   
Sbjct: 58  PPMSVSRMIRKMKLPGRENRT-AVVVGTVTDDVRIHEIPNLKVSALKITRRNRTRILKF- 115

Query: 422 GECLTFDQLALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHTKPYVRS 577
            + + F  LAL AP  + ++LL  P+NAR+  RHF  AP +P  HTKPYV S
Sbjct: 116 VQIMRFVGLALAAPNRQKSVLLSAPRNARDVSRHFANAPSIP--HTKPYVLS 165

to top

>RL18_PIG (Q95342) 60S ribosomal protein L18 (Fragment)|
          Length = 103

 Score =  119 bits (298), Expect = 7e-27
 Identities = 63/105 (60%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
 Frame = +2

Query: 74  GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 253
           G+D +   ++++ +R  PKS D+YL+LLVKL RFL RRT S FN V+LKRLFMS+TNRPP
Sbjct: 1   GVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLXRFLARRTNSTFNQVVLKRLFMSRTNRPP 59

Query: 254 LSMRRLSNFMK--GKEEKNIAVVVGTITDDMRIQEIPAMKVTALR 382
           LS+ R+   MK  G+E K  AVVVGTITDD+R QE+P +KV ALR
Sbjct: 60  LSLSRMXRKMKLPGREGKT-AVVVGTITDDVRFQEVPKLKVCALR 103

to top

>RL18E_PYRAB (Q9V197) 50S ribosomal protein L18e|
          Length = 120

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 37/125 (29%), Positives = 64/125 (51%)
 Frame = +2

Query: 113 KRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGK 292
           KR  P   D  L+ L++  R      K K    I  RL   +  R  +++ R++ + K  
Sbjct: 2   KRTGPT--DPNLRRLIRYLRKKSNEEKVKIWKDIAWRLERPRRQRAEVNVSRINRYAK-- 57

Query: 293 EEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGE 472
            + ++ VV G++    +I++   + V A +F+ETAR +I  AGGE +T ++L  R P G 
Sbjct: 58  -DGDMIVVPGSVLGAGKIEK--KVIVAAWKFSETARRKIEEAGGEAITIEELIKRNPKGS 114

Query: 473 NTILL 487
             I++
Sbjct: 115 GVIIM 119

to top

>RL18E_PYRKO (Q5JJF5) 50S ribosomal protein L18e|
          Length = 121

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 33/125 (26%), Positives = 63/125 (50%)
 Frame = +2

Query: 113 KRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGK 292
           KR  P   D+ L+ L++  R        K    I  RL   +  R  +++ +++ + K  
Sbjct: 3   KRTGPT--DINLRRLIRTLRKKSNEEGVKIWKDIAWRLERPRRQRAEVNISKINRYTK-- 58

Query: 293 EEKNIAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGE 472
            E ++ +V G++    R++    + V A +F+E AR +I+ AGGE ++ ++L  R P G 
Sbjct: 59  -EGDVVIVPGSVLGAGRLEH--KVVVAAWKFSEAARRKIIEAGGEAISIEELMERNPKGS 115

Query: 473 NTILL 487
             I++
Sbjct: 116 GVIIM 120

to top

>RL18E_PYRHO (O59302) 50S ribosomal protein L18e|
          Length = 120

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
 Frame = +2

Query: 170 RFLVRRTKSKFNAVILK-------RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTI 328
           R L+R  K K N   +K       RL   +  R  +++ +++ + K   + ++ VV G++
Sbjct: 12  RRLIRFLKKKSNEEGVKIWKDLAWRLERPRRQRAEVNVSKINRYAK---DGDMIVVPGSV 68

Query: 329 TDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 487
               ++++   + V A +F+ETAR +I  AGGE +T ++L  R P G   I++
Sbjct: 69  LGAGKLEK--KVIVAAWKFSETARKKITEAGGEAITIEELIERNPKGSGVIIM 119

to top

>RL18E_PYRFU (Q8U0E5) 50S ribosomal protein L18e|
          Length = 120

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 32/115 (27%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
 Frame = +2

Query: 155 LVKLYRFLVRRTKSKFNAVILK----RLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVG 322
           L +L R+L R+  +++   I K    RL   +  R  +++ +++ +    E   + VV G
Sbjct: 11  LRRLIRYL-RKKSNEYGVKIWKDVAWRLERPRRQRAEVNVSKINRYANDGE---MIVVPG 66

Query: 323 TITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 487
           ++    ++++   + V A +F+ETAR +I+ AGGE +T ++L  R PTG    ++
Sbjct: 67  SVLGAGKLEK--KVIVAAWKFSETARRKIIEAGGEAITIEELIERNPTGSGVRIM 119

to top

>RL18E_METJA (P54022) 50S ribosomal protein L18e|
          Length = 121

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
 Frame = +2

Query: 155 LVKLYRFLVR---RTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGT 325
           LVKL   L +   + ++K    I +RL   +  R  +++ +++ + K   E ++ +V G 
Sbjct: 12  LVKLIEILKQESYKNQAKIWKDIARRLAKPRRRRAEVNLSKINRYTK---EGDVVLVPGK 68

Query: 326 ITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 487
           +    +++    + V A  F+ETA+  I  AGGE +T ++L  R P G N  ++
Sbjct: 69  VLGAGKLEH--KVVVAAFAFSETAKKLIKEAGGEAITIEELIKRNPKGSNVKIM 120

to top

>RL18E_METTH (O26145) 50S ribosomal protein L18e|
          Length = 121

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
 Frame = +2

Query: 155 LVKLYRFLVRRTKSKFNAV---ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAV---V 316
           L+KL R L +++  +  A+   + +RL     NR  +++ +++      E++ + V   V
Sbjct: 12  LIKLIRNLRKKSSQEGAAIWKDVARRLERPTRNRAAVNISKINRH--SDEDETVLVPGKV 69

Query: 317 VGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGEN 475
           +G+   D R+Q      V AL F++TAR +I  AGGECLT  ++    P  +N
Sbjct: 70  LGSGNLDHRVQ------VVALSFSQTARDKIERAGGECLTLGKIVEENPAIKN 116

to top

>RL18E_METKA (Q8TVB7) 50S ribosomal protein L18e|
          Length = 127

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
 Frame = +2

Query: 155 LVKLYRFLVRRTKSKFNAVILK----RLFMSKTNRPPLSMRRLSNFMKGK--EEKNIAVV 316
           L KL R L ++   ++NA + +    RL   +  R  +++ +L    +    +E+   +V
Sbjct: 13  LRKLIRDL-KKAACEYNAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLV 71

Query: 317 VGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTG 469
            G +  D  I +   ++V A RF+ TAR +I  AGGECLT  +L    P G
Sbjct: 72  PGKVLGDGVITQ--PLRVAAWRFSRTARMKIEAAGGECLTIRELLEENPEG 120

to top

>RL18E_ARCFU (O29138) 50S ribosomal protein L18e|
          Length = 117

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 24/92 (26%), Positives = 44/92 (47%)
 Frame = +2

Query: 212 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 391
           + +RL   +  +  +++ ++  + K  E     VV G +     I +   +KV AL F+E
Sbjct: 30  VAERLAKPRRLQAEVNVSKIEKYAKPNE---YVVVPGKVLGSGSITK--PVKVAALSFSE 84

Query: 392 TARARIVNAGGECLTFDQLALRAPTGENTILL 487
            A ++I  AGG C+  ++L    P G    L+
Sbjct: 85  KAASKIREAGGVCMKIEELLKENPKGSGVRLM 116

to top

>RL18E_METMP (Q6LXM7) 50S ribosomal protein L18e|
          Length = 120

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 368 VTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILL 487
           V A  F+ETA++ I   GG+CLT ++L    P G    ++
Sbjct: 80  VAAFSFSETAKSAIEAVGGKCLTIEELIAENPKGSKVTIM 119

to top

>MCM1_YEAST (P11746) Pheromone receptor transcription factor (GRM/PRTF protein)|
          Length = 286

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +1

Query: 97  EEQEDQARRAQVRRCVPQAPRQALPFPGE---EDQEQVQRRHPQEALHEQDQPPAALHAP 267
           ++Q+ Q + +Q +      P+Q +P P +   + Q+Q Q++  Q+   +Q QP   +H P
Sbjct: 194 QQQQPQQQMSQQQMSQHPRPQQGIPHPQQSQPQQQQQQQQQLQQQQQQQQQQPLTGIHQP 253

Query: 268 SLQ 276
             Q
Sbjct: 254 HQQ 256

to top

>RL18E_PYRAE (Q8ZYQ2) 50S ribosomal protein L18e|
          Length = 122

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 24/108 (22%), Positives = 52/108 (48%)
 Frame = +2

Query: 146 LKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGT 325
           L++L +  R   R   +    V+ + +   +  R  +++ +L+   K   E ++ VV G 
Sbjct: 13  LRMLARFLRKAARANSASIWRVVAEFVEKPRRQRVIVNVGKLNRVAK---EGDVVVVPGK 69

Query: 326 ITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTG 469
           +    ++ +   + V A++ +  A  +++ AGGE LT  +L  + P G
Sbjct: 70  LLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRG 115

to top

>RL18E_METMA (Q8PW46) 50S ribosomal protein L18e|
          Length = 126

 Score = 32.7 bits (73), Expect = 0.87
 Identities = 22/93 (23%), Positives = 45/93 (48%)
 Frame = +2

Query: 212 ILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPAMKVTALRFTE 391
           I KRL     N   +++ +++   +   E ++ +V G +     +     + V A+ F+E
Sbjct: 39  IAKRLEAPSRNYAAVNISKIN---RHTAENDVLLVPGKVLGAGLLDH--PVTVAAVTFSE 93

Query: 392 TARARIVNAGGECLTFDQLALRAPTGENTILLR 490
           +A  +I  AGG+CL+ +++    P G    + R
Sbjct: 94  SAVEKITEAGGKCLSVEEIMEANPKGSGIRIFR 126

to top

>KCNN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassium channel|
           protein 3 (SK3) (SKCa3)
          Length = 736

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = +1

Query: 97  EEQEDQARRAQVRRCVPQAPRQAL-----PFPGEEDQEQVQRRHPQEALHEQDQPPAAL 258
           ++Q+ Q ++       P AP+Q L     P P +  Q+Q Q++  Q+   +Q QPP  L
Sbjct: 32  QQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQQQQQQQQQQQQQQQPPHPL 90

to top

>RL18E_THEAC (Q9HL06) 50S ribosomal protein L18e|
          Length = 120

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 24/103 (23%), Positives = 50/103 (48%)
 Frame = +2

Query: 182 RRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIAVVVGTITDDMRIQEIPA 361
           R + SK    I +RL   +     +++ ++  + K   + +I VV G +    +I +   
Sbjct: 23  RESGSKLWRDIAERLASRRRGYASVNLSKIDKYAK---DGDIIVVPGYVLGVGKISK--K 77

Query: 362 MKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLR 490
           + V A +F++TA  ++ N+G   +   ++A   P G N  ++R
Sbjct: 78  VTVGAYKFSKTAMEKLSNSGCAFMNISEIAKDNPKGTNVKIMR 120

to top

>RL18E_METAC (Q8TT44) 50S ribosomal protein L18e|
          Length = 126

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +2

Query: 368 VTALRFTETARARIVNAGGECLTFDQLALRAPTGENTILLR 490
           + AL F+++A  +I  AGG+CL+ +++    P G    + R
Sbjct: 86  IAALTFSDSAFEKITEAGGKCLSLEEIMEANPKGSGIRIFR 126

to top

>MURD_RHILO (Q98KB1) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 466

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
 Frame = +2

Query: 392 TARARIVNAGGECLTFDQ----LALRAPTGENTILLRGPKNAREAVRHFGKAPGVPHSHT 559
           TARA ++  G + L +D     +A  A TG  T  LRG   A+ +   F  +PGVP +H 
Sbjct: 24  TARA-LIEGGAQVLAWDDNPDSVAKAAATGIATADLRGADWAKFSA--FVLSPGVPLTHP 80

Query: 560 KPY 568
           KP+
Sbjct: 81  KPH 83

to top

>GDB0_WHEAT (P08079) Gamma-gliadin precursor (Fragment)|
          Length = 251

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 97  EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALHEQDQPPAALHAPSLQ 276
           + Q+ Q +  Q ++  PQ P+Q  P+P +  Q   Q + PQ+   +  QP      P  Q
Sbjct: 69  QPQQPQQQFLQPQQPFPQQPQQ--PYPQQPQQPFPQTQQPQQLFPQSQQPQQQFSQPQQQ 126

to top

>BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6|
            (Ubiquitin-conjugating BIR-domain enzyme apollon)
          Length = 4829

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = +1

Query: 181  EEDQEQVQRRHPQEALHEQDQPPAALHAPSLQL 279
            E  QEQ QRRHPQ  LH+Q    AA H  + +L
Sbjct: 1020 EVQQEQQQRRHPQH-LHQQHHGDAAQHTRTWKL 1051

to top

>GDBX_WHEAT (P21292) Gamma-gliadin precursor|
          Length = 302

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +1

Query: 97  EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALHEQDQPPAALHAPSLQ 276
           + Q+ Q    Q ++  PQ P+  LPFP +  Q   Q + PQ+   +  QP      P  Q
Sbjct: 84  QTQQPQQPFPQPQQTFPQQPQ--LPFPQQPQQPFPQPQQPQQPFPQSQQPQQPFPQPQQQ 141

to top

>GDBB_WHEAT (P06659) Gamma-gliadin B precursor|
          Length = 291

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 97  EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALHEQDQPPAALHAP 267
           + Q+ Q +  Q R+  PQ P+Q  P+P +  Q   Q + PQ+   +  QP      P
Sbjct: 69  QPQQPQQQFLQPRQPFPQQPQQ--PYPQQPQQPFPQTQQPQQPFPQSKQPQQPFPQP 123

to top

>GDB2_WHEAT (P08453) Gamma-gliadin precursor|
          Length = 327

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +1

Query: 100 EQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALHEQDQPPAALHAPSLQL 279
           +Q  Q    Q ++  PQ  +   PFP +  Q   Q + PQ+   +  QP      P  QL
Sbjct: 96  QQPQQPFPQQPQQPFPQTQQPQQPFPQQPQQPFPQTQQPQQPFPQLQQPQQPFPQPQQQL 155

to top

>AMPA_CLOPE (Q8XHI3) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 493

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
 Frame = +2

Query: 164 LYRFLVRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNFMKGKEEKNIA---VVVGTITD 334
           +Y FLV+++K      +L   F  KTN P   +    N +K KE+   +   +   T T 
Sbjct: 1   MYNFLVKKSKCTETDALLIPYFEEKTNIPNEEINNKINILKKKEQFKGSYGEIFNITRTT 60

Query: 335 DMRIQEIPAMKVTALRFTETARARIVNAGGECL 433
           D  IQ+I  + +   + TE  + +I  A G+ +
Sbjct: 61  DDNIQDIILLGLG--KETEITKEKIRRAFGKAV 91

to top

>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1980

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +1

Query: 112 QARRAQVRRCVPQAPRQALPFPG-------EEDQEQVQRRHPQEALHEQDQPPAALHAP 267
           QA +A VR+   +A  Q  P P        +EDQ++  RRH  E   + D      H P
Sbjct: 264 QASKAGVRQGCEEAVSQVEPLPSLMKGLKRKEDQDRSPRRHGHEPAEDSDPLSRGDHPP 322

to top

>NPDC1_MOUSE (Q64322) Neural proliferation differentiation and control protein 1|
           precursor (NPDC-1 protein)
          Length = 332

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/86 (27%), Positives = 32/86 (37%)
 Frame = -3

Query: 564 GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILALAVSV 385
           GL    GT   +P    +SRA  GP+      P G         RH      +L LA  +
Sbjct: 149 GLPSTHGTSSPIPHTSLSSRASSGPVQMSPLEPQG---------RHGNGLTLVLILAFCL 199

Query: 384 NLRAVTFIAGISWIRMSSVIVPTTTA 307
              A   +A + W R+   I  T  A
Sbjct: 200 ASSAALAVAALCWCRLQREIRLTQKA 225

to top

>PO6F2_HUMAN (P78424) POU domain, class 6, transcription factor 2|
           (Retina-derived POU-domain factor 1) (RPF-1)
          Length = 684

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 97  EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALHEQDQPPA 252
           ++Q+ Q ++ Q      Q P+ A   P +  Q+ +Q   PQ+      QPPA
Sbjct: 179 QQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPA 230

to top

>HOXV_AZOVI (P40597) Hydrogenase expression/formation protein hoxV|
          Length = 348

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -3

Query: 585 LPLERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPA 415
           +PLER   L+ LC    A  + LTA RA   P +  +   + A  A+W+ ++   PA
Sbjct: 111 VPLERLKALLALCRRAAARLQALTAFRAAPLPADAELEGTLAALAAAWADLQPPAPA 167

to top

>HUPK_AZOVI (P31878) Hydrogenase expression/formation protein hupK|
          Length = 342

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -3

Query: 585 LPLERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPA 415
           +PLER   L+ LC    A  + LTA RA   P +  +   + A  A+W+ ++   PA
Sbjct: 105 VPLERLKALLALCRRAAARLQALTAFRAAPLPADAELEGTLAALAAAWADLQPPAPA 161

to top

>TIM50_YARLI (Q6CDV7) Import inner membrane translocase subunit TIM50,|
           mitochondrial precursor
          Length = 466

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +2

Query: 491 GPKNAREAVRHFGKAPGVPHSHTKP 565
           GPKN  EAV   G  P VP   T+P
Sbjct: 440 GPKNLSEAVSSIGSLPPVPQQPTEP 464

to top

>SSH1_HUMAN (Q8WYL5) Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC|
           3.1.3.16) (SSH-1L) (hSSH-1L)
          Length = 1049

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 139 CVPQAPRQALPFPGEEDQEQVQRRHPQ-EALHEQDQPPAALHAPSLQ 276
           C  +     LP P +E    V    P+ EAL E+  PPA +H P+ Q
Sbjct: 510 CFRRLSDPLLPSPEDETGSLVHLEDPEREALLEEAAPPAEVHRPARQ 556

to top

>CUT_DROME (P10180) Homeobox protein cut|
          Length = 2175

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = +1

Query: 97   EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALHEQDQPPAALHAPSLQ 276
            ++Q  QA++AQ    + Q  +Q L    ++ Q   Q++HP +  H+     AALH  S+ 
Sbjct: 1490 QQQAQQAQQAQQH--LQQQAQQHL----QQQQHLAQQQHPHQQHHQAAAAAAALHHQSML 1543

Query: 277  L 279
            L
Sbjct: 1544 L 1544

to top

>PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101|
          Length = 618

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -1

Query: 554 GCAAHQEPCRSASPPHGHSWVPSTGSCSPQLEHGEQA 444
           G  A   P  S S   GHS  PS+ + SPQ  HG  A
Sbjct: 416 GTPAVTPPSSSMSYTSGHSPSPSSSAMSPQSRHGSTA 452

to top

>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
 Frame = +1

Query: 103 QEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQR------RHPQEALHEQDQPP 249
           Q  QA++AQ  +  PQAP+   P    + Q+  Q       + PQ+A   Q  PP
Sbjct: 692 QAQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQAPQAQQAQQPQQAQQPQQAPP 746

to top

>PACC_GIBMO (Q873X0) pH-response transcription factor pacC/RIM101|
          Length = 613

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -1

Query: 554 GCAAHQEPCRSASPPHGHSWVPSTGSCSPQLEHGEQA 444
           G  A   P  S S   GHS  PS+ + SPQ  HG  A
Sbjct: 411 GTPAVTPPSSSMSYTSGHSPSPSSSAMSPQSRHGSTA 447

to top

>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 533 PCRSASPPHGHSWVPSTGSCSPQLEHGEQAGQK*GTPHQH*Q 408
           P R ASP   H   P+ G+ +P+ + G + G    TP +H Q
Sbjct: 86  PARQASPASAHQQAPTPGAPTPRPQGGARPGMP--TPGRHGQ 125

to top

>PHYK_MAIZE (Q2N2K4) Probable phytol kinase, chloroplast precursor (EC 2.7.-.-)|
          Length = 303

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 575 SAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGS 477
           +A  AW G A+      S SPPH  +  PS GS
Sbjct: 2   AAAAAWTGAASPNSLLLSRSPPHAAALAPSPGS 34

to top

>PHYK2_SOYBN (Q2N2K2) Probable phytol kinase 2, chloroplast precursor (EC|
           2.7.-.-)
          Length = 292

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 575 SAHRAWCGCAAHQEPCRSASPPHGHSWVPSTGS 477
           +A  AW G A+      S SPPH  +  PS GS
Sbjct: 2   AAAAAWTGAASPNSLLLSRSPPHAAALAPSPGS 34

to top

>VID21_USTMA (Q4P209) Chromatin modification-related protein VID21|
          Length = 1654

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 97   EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALHEQDQPP 249
            ++Q+ Q ++ Q ++   Q  +Q      ++ Q+Q Q++ PQ+    Q +PP
Sbjct: 1562 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPAPTQQRPP 1612

to top

>SE3AA_BRARE (Q9W7J1) Semaphorin-3aa precursor (Semaphorin-1A) (Semaphorin Z1A)|
           (Sema-Z1A)
          Length = 860

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 100 EQEDQARRAQVRRCV--PQAPRQALPFPGEEDQEQVQRRHPQEALHEQDQPPAAL 258
           ++  +++RAQ  +    PQ P++  P   +  Q Q  +R      HEQ +PP ++
Sbjct: 806 QKASESQRAQPNQAKKGPQTPQRGPPHTAKWKQLQENKRGRNRRTHEQQRPPRSV 860

to top

>DPLD_DROME (Q9V4M2) Protein dappled|
          Length = 832

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
 Frame = -2

Query: 400 PRCLCEPQSGNL-------HCWDLLDPHVICDCAXXXXXXXXXXXXHEVGETAHGERRAV 242
           PR +C   +GN+       HC  L+DP +                    G   H   R  
Sbjct: 695 PRGVCYTPTGNIIVSDFDNHCLYLIDPDI----------NDILSVKGHEGSGFHEFNRPS 744

Query: 241 GLAHEEPLEDDGVELALGPPHQETVELDEELEVHIVGLGRDALGPLVPPASDEVD 77
           GL      +D+G  +     +Q  +  ++ L+       R ++ PL+PP  DE D
Sbjct: 745 GLC----CDDEGRIIVADSKNQRILVFNQNLDFMWDIEVRPSINPLMPPTLDEKD 795

to top

>KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin)
          Length = 474

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 97  EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALH--EQDQPPAA 255
           EE+E++    +  R VPQ P   L     E  +Q  +R+ +E L   E++  P A
Sbjct: 403 EEEEEEEEEEETSRMVPQEPEDRL-----ETDDQEMKRNSEETLKSVEEEMDPKA 452

to top

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
            (Trithorax homolog 2)
          Length = 2715

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 11/72 (15%)
 Frame = +1

Query: 97   EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQE-----QVQRRHPQE------ALHEQDQ 243
            EEQ+   +R   RRCV Q P   + F   +D E       +RR P+E         EQ +
Sbjct: 1065 EEQDSLLQRKSARRCVKQRPSYDI-FEDSDDSEPGGPPAPRRRTPRENELPLPEPEEQSR 1123

Query: 244  PPAALHAPSLQL 279
            P      P LQL
Sbjct: 1124 PRKPTLQPVLQL 1135

to top

>ISPD_ARATH (P69834) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,|
           chloroplast precursor (EC 2.7.7.60)
           (4-diphosphocytidyl-2C-methyl-D-erythritol synthase)
           (MEP cytidylyltransferase) (MCT) (AtMEPCT) (AtMECT)
          Length = 302

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 23  SATPRGNPTAAAAEAAMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRF 175
           S+T   N      E ++ + L+AGG+ KR K   PK     L   + LY F
Sbjct: 63  SSTGFDNSNVVVKEKSVSVILLAGGQGKRMKMSMPKQYIPLLGQPIALYSF 113

to top

>TRHY_RABIT (P37709) Trichohyalin|
          Length = 1407

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +1

Query: 97  EEQEDQARRAQVRRCVPQAPRQALPFPGEEDQEQVQRRHPQEALHEQD 240
           EE+++Q +R +      +  RQ L F   E++EQ+QRR   + L E+D
Sbjct: 456 EERQEQEQRFREEEEQRRERRQELQFL--EEEEQLQRRERAQQLQEED 501

to top

>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (DNup214)
          Length = 1711

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = -3

Query: 546  GTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILALAVSVNLRAVT 367
            GT  A+PK   +S A          +P G   A+ +K  +S P  T+ +   ++  +   
Sbjct: 1108 GTAAAVPKSEPSSTATTSVATSASTAPFGIFSAALAKPSNSEPITTVTSNTTTITSKPTN 1167

Query: 366  FIAGISWIRMSSVIVPTTTAMFFSSFP 286
             IA  S     S  V TT A+  S+ P
Sbjct: 1168 VIASSSVTDAPS--VTTTNAVTSSTDP 1192

to top

>NRX3A_RAT (Q07310) Neurexin-3-alpha precursor (Neurexin III-alpha)|
          Length = 1578

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -2

Query: 460 STESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCA 320
           ++E +L+ S+++    + PC    CE  +G + C+ LLD H  CDC+
Sbjct: 183 NSEPRLLGSQSVQLEAEGPCGERPCE--NGGI-CF-LLDGHPTCDCS 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,753,847
Number of Sequences: 219361
Number of extensions: 1660462
Number of successful extensions: 7241
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 6561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7164
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result