ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal11l09 |
|---|---|
| Clone Library Name | barley_pub |
>ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)| Length = 859 Score = 254 bits (650), Expect(2) = 3e-70 Identities = 125/169 (73%), Positives = 141/169 (83%), Gaps = 2/169 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRLVAGDAFIFLRGE+GELRVGVRRAMRQ MHLGVLATAWHAI+T TM Sbjct: 240 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 299 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 FTVYYKPRTS SEFI+P+D+Y ESVKN YSIG RFKMRFEGEEAPEQRFTGTIVG + D Sbjct: 300 FTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESD 359 Query: 438 QL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPP-VNPLPLSR 578 WP+S WRSLKVRWDE+S+IPRPDRVSPW++EPA +PP ++P+P+ R Sbjct: 360 PTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPR 408 Score = 30.4 bits (67), Expect(2) = 3e-70 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLLQ 49 R IFRGQPRRHLLQ Sbjct: 217 RHIFRGQPRRHLLQ 230
>ARFA_ARATH (Q8L7G0) Auxin response factor 1| Length = 665 Score = 203 bits (516), Expect(2) = 3e-54 Identities = 103/171 (60%), Positives = 125/171 (73%), Gaps = 4/171 (2%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K+LVAGDAFIFLRGE+ ELRVGVRR MRQ MH+GVLATA HAI T T+ Sbjct: 200 KKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTI 259 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVG-SDNL 434 F+V+YKPRTSRSEFI+ ++Y E+ S+G RFKMRFEGEEAPE+RF+GTIVG +N Sbjct: 260 FSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENK 319 Query: 435 DQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEPA---SSPPVNPLPLSR 578 +W +S WRSLKV+WDE S++ RP+RVSPWE+EP S+P P P R Sbjct: 320 SSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQR 370 Score = 28.5 bits (62), Expect(2) = 3e-54 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R IFRGQPRRHLL Sbjct: 177 RHIFRGQPRRHLL 189
>ARFR_ARATH (Q9C5W9) Auxin response factor 18| Length = 602 Score = 202 bits (513), Expect(2) = 2e-53 Identities = 99/164 (60%), Positives = 123/164 (75%), Gaps = 2/164 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRLVAGDAF+FLRGE+G+LRVGVRR R MHLGVLATA HA+ T T+ Sbjct: 204 KRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTI 263 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V+YKPR S +FI+ +KY E++K+ +S+GTRF+MRFEGEE+PE+ FTGTIVGS +L Sbjct: 264 FVVFYKPRIS--QFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLS 321 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP--ASSPPVNP 563 WP S WRSL+V+WDE +T+ RPD+VSPWEIEP A+SP P Sbjct: 322 SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTP 365 Score = 27.3 bits (59), Expect(2) = 2e-53 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +2 Query: 14 IFRGQPRRHLL 46 IFRGQPRRHLL Sbjct: 183 IFRGQPRRHLL 193
>ARFK_ARATH (Q9ZPY6) Auxin response factor 11| Length = 601 Score = 196 bits (497), Expect(2) = 1e-51 Identities = 94/164 (57%), Positives = 120/164 (73%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRLVAGDAF+FLRGE+G+LRVGVRR +Q M LGVLATA HA+ T T+ Sbjct: 200 KRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTI 259 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V+YKPR S +FII +KY ++KN +S+G R++MRFEGEE+PE+ FTGTI+GS +L Sbjct: 260 FVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLS 317 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPPVNPLP 569 WP S WRSL+++WDE S+I RP++VSPWEIEP S + P P Sbjct: 318 SQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTP 361 Score = 27.3 bits (59), Expect(2) = 1e-51 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +2 Query: 14 IFRGQPRRHLL 46 IFRGQPRRHLL Sbjct: 179 IFRGQPRRHLL 189
>ARFI_ARATH (Q9XED8) Auxin response factor 9| Length = 638 Score = 192 bits (487), Expect(2) = 2e-50 Identities = 92/154 (59%), Positives = 114/154 (74%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRLVAGD F+FLRGE+GELRVGVRRA Q MHLGVLATA HA TKTM Sbjct: 192 KRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTM 251 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F VYYKPRTS +FII +KY E++ N +S+G RFKMRFEGE++PE+R++GT++G + Sbjct: 252 FIVYYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCS 309 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP 539 W +S WR L+V WDE ++I RP++VSPWEIEP Sbjct: 310 PHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEP 343 Score = 27.3 bits (59), Expect(2) = 2e-50 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = +2 Query: 14 IFRGQPRRHLL 46 IFRGQPRRHLL Sbjct: 171 IFRGQPRRHLL 181
>ARFO_ARATH (Q9LQE3) Putative auxin response factor 15| Length = 593 Score = 159 bits (401), Expect(2) = 5e-39 Identities = 78/162 (48%), Positives = 109/162 (67%), Gaps = 3/162 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K+LV GD +F+RGE+GELRVG+RRA Q M GV+A+A HA + + M Sbjct: 202 KKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCM 261 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V YKPR+S +FI+ YDK+ ++V N +++G+RF MRFEG++ E+R+ GTI+G N Sbjct: 262 FIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSNFS 319 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIE---PASSPP 554 W S WRSL+V+WDE ++ RP++VSPWEIE PA + P Sbjct: 320 PHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVP 361 Score = 21.9 bits (45), Expect(2) = 5e-39 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 2 SARGIFRGQPRRHLL 46 S R +RG P+RHLL Sbjct: 177 SFRHSYRGTPQRHLL 191
>ARFM_ARATH (Q9FX25) Putative auxin response factor 13| Length = 623 Score = 157 bits (398), Expect(2) = 1e-38 Identities = 74/153 (48%), Positives = 104/153 (67%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRL+ GD F+ LRGE+GELR G+RRA Q M GV+A+ +A TK M Sbjct: 204 KRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCM 263 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V YKP S S+F+I YDK+ +++ N Y +G+RF+M+FEG++ E+R+ GTI+G +++ Sbjct: 264 FNVVYKP--SSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDMS 321 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIE 536 W +S WRSLKV+WDE S RP++VSPW+IE Sbjct: 322 PHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 354 Score = 21.6 bits (44), Expect(2) = 1e-38 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = +2 Query: 2 SARGIFRGQPRRHL 43 S + +FRG P+RH+ Sbjct: 177 SFKHVFRGTPQRHM 190
>ARFV_ARATH (Q9C8N7) Putative auxin response factor 22| Length = 598 Score = 158 bits (399), Expect(2) = 2e-38 Identities = 77/162 (47%), Positives = 110/162 (67%), Gaps = 3/162 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K+LVAGD +F+RGE+GELRVG+RRA Q M GV+A+A HA + + M Sbjct: 200 KKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQCM 259 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V YKPR+S +FI+ YDK+ ++V N +++G+RF MRFEG++ E+R+ GTI+G + Sbjct: 260 FIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFS 317 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIE---PASSPP 554 W S WR+L+V+WDE ++ RP++VSPWEIE PA + P Sbjct: 318 PHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPALNVP 359 Score = 20.8 bits (42), Expect(2) = 2e-38 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +2 Query: 17 FRGQPRRHLL 46 +RG P+RHLL Sbjct: 180 YRGTPQRHLL 189
>ARFD_ARATH (Q9ZTX9) Auxin response factor 4| Length = 788 Score = 150 bits (380), Expect(2) = 3e-38 Identities = 75/160 (46%), Positives = 103/160 (64%), Gaps = 1/160 (0%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K LV+GDA +FLR E GELR+G+RRA R +L+ +A++TK+M Sbjct: 253 KNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NILSLVANAVSTKSM 311 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V+Y PR + +EF+IPY+KY S+++ IGTRF+MRFE +++PE+R G + G +LD Sbjct: 312 FHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPERRCAGVVTGVCDLD 371 Query: 438 QL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPP 554 WP S WR L VRWDES +RVSPWEI+P+ S P Sbjct: 372 PYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP 411 Score = 27.3 bits (59), Expect(2) = 3e-38 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R I+RGQPRRHLL Sbjct: 230 RHIYRGQPRRHLL 242
>ARFU_ARATH (Q9C8N9) Putative auxin response factor 21| Length = 606 Score = 156 bits (394), Expect = 5e-38 Identities = 77/166 (46%), Positives = 111/166 (66%), Gaps = 3/166 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K+LV GD +F+RGE+GELRVG+RRA Q M GV+A+A HA + + + Sbjct: 202 KKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCI 261 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V YKPR+S +FI+ YDK+ ++V N +++G+RF MRFEG++ E+R+ GTI+G + Sbjct: 262 FIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFS 319 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIE---PASSPPVNPL 566 W S WRSL+V+WDE ++ RP++VSPWEIE PA + P + L Sbjct: 320 PHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSL 365
>ARFN_ARATH (Q9LQE8) Putative auxin response factor 14| Length = 605 Score = 155 bits (391), Expect = 1e-37 Identities = 73/153 (47%), Positives = 104/153 (67%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K+LV GD +F+RGE+GELRVG+RRA Q M G++A+A HA + + M Sbjct: 202 KKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCM 261 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V YKPR+S +FI+ YDK+ + V N +++G+RF MRFEG++ E+R GTI+G + Sbjct: 262 FIVVYKPRSS--QFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFS 319 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIE 536 W S WRSL+V+WDE ++ PRP++VSPW+IE Sbjct: 320 PHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIE 352
>ARFL_ARATH (Q9XID4) Putative auxin response factor 12| Length = 593 Score = 155 bits (392), Expect(2) = 1e-37 Identities = 77/162 (47%), Positives = 108/162 (66%), Gaps = 3/162 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K+LVAGD +F+RGE+GELRVG+RRA Q M GV+A+A HA + + M Sbjct: 202 KKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCM 261 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 FTV YKPR+S+ FI+ YDK+ ++V N +++G+RF MR EG++ E+R GTI+G + Sbjct: 262 FTVVYKPRSSK--FIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFS 319 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIE---PASSPP 554 W S WRSL+V+WDE ++ P P +VSPW+IE PA + P Sbjct: 320 PHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAINVP 361 Score = 20.8 bits (42), Expect(2) = 1e-37 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +2 Query: 17 FRGQPRRHLL 46 +RG P+RHLL Sbjct: 182 YRGTPQRHLL 191
>ARFT_ARATH (Q9C7I9) Putative auxin response factor 20| Length = 606 Score = 154 bits (389), Expect = 2e-37 Identities = 72/153 (47%), Positives = 106/153 (69%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K+LV GD +F+RGE+GELRVG+RRA Q M GV+A+A HA++ + + Sbjct: 202 KKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQCI 261 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F V YKPR+S +FI+ YDK+ +++ N + +G+RF MRFEG++ E+R+ GTI+G ++ Sbjct: 262 FIVVYKPRSS--QFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVNDFS 319 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIE 536 W S WRSL+V+WDE ++ RP++VSPWEIE Sbjct: 320 PHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 352
>ARFH_ARATH (Q9FGV1) Auxin response factor 8| Length = 811 Score = 147 bits (372), Expect(2) = 3e-37 Identities = 77/164 (46%), Positives = 104/164 (63%), Gaps = 2/164 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRLVAGD+ IF+R E +L +G+R A R MH+G+LA A HA T + Sbjct: 202 KRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSC 261 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNI-YSIGTRFKMRFEGEEAPEQRFTGTIVGSDNL 434 FTV++ PR S+SEF+I KY ++V + S+G RF+M FE EE+ +R+ GTI G +L Sbjct: 262 FTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDL 321 Query: 435 DQL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPPVNP 563 D + WP S WRS+KV WDES+ R RVS WEIEP ++ P+ P Sbjct: 322 DSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 365 Score = 27.3 bits (59), Expect(2) = 3e-37 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R IFRGQP+RHLL Sbjct: 179 RHIFRGQPKRHLL 191
>ARFF_ARATH (Q9ZTX8) Auxin response factor 6| Length = 933 Score = 145 bits (367), Expect(2) = 9e-37 Identities = 77/166 (46%), Positives = 103/166 (62%), Gaps = 2/166 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRLVAGD+ +F+ + +L +G+RRA R MHLG+LA A HA T + Sbjct: 203 KRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSR 262 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNI-YSIGTRFKMRFEGEEAPEQRFTGTIVGSDNL 434 FT++Y PR S SEF+IP KY ++V + S+G RF+M FE EE+ +R+ GTI G +L Sbjct: 263 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDL 322 Query: 435 DQL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPPVNPLP 569 D W S WRS+KV WDES+ R RVS WEIEP ++ P+ P P Sbjct: 323 DPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSP 368 Score = 27.3 bits (59), Expect(2) = 9e-37 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R IFRGQP+RHLL Sbjct: 180 RHIFRGQPKRHLL 192
>ARFS_ARATH (Q8RYC8) Auxin response factor 19 (Auxin-responsive protein IAA22)| Length = 1086 Score = 145 bits (365), Expect(2) = 4e-36 Identities = 70/159 (44%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRL AGD+ +F+R E +L +G+RRA RQ MH+G+LA A HA + Sbjct: 202 KRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSP 261 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 FT+++ PR S SEF++P KY +++ S+G RF+M FE E+ +R+ GT+ G +LD Sbjct: 262 FTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLD 321 Query: 438 QL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSP 551 + W S WR+L+V WDES+ RP RVS WEIEP +P Sbjct: 322 PVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITP 360 Score = 26.2 bits (56), Expect(2) = 4e-36 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R I+RGQP+RHLL Sbjct: 179 RHIYRGQPKRHLL 191
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 144 bits (364), Expect(2) = 5e-36 Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 2/159 (1%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRL AGD+ +F+R E +L VGVRRA RQ MH+GVLA A HA +T Sbjct: 234 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 293 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESV-KNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNL 434 F ++Y PR +EF+IP KY +++ + S+G RF M FE E++ ++R+ GTIVG +L Sbjct: 294 FLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDL 353 Query: 435 DQL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASS 548 D L WP S WR+L+V WDE +P RVSPW+IE S Sbjct: 354 DPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPES 392 Score = 26.2 bits (56), Expect(2) = 5e-36 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R I+RGQP+RHLL Sbjct: 211 RHIYRGQPKRHLL 223
>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)| (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) Length = 1164 Score = 143 bits (361), Expect(2) = 1e-35 Identities = 69/159 (43%), Positives = 99/159 (62%), Gaps = 1/159 (0%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 KRL AGD+ +F+R +L +G+RRA RQ MH+GVLA A HA + Sbjct: 203 KRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSP 262 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 FT++Y PR + +EF++P KYT+++ S+G RF+M FE EE +R+ GT+ G +LD Sbjct: 263 FTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLD 322 Query: 438 QL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSP 551 + W S WR+L++ WDES+ RP RVS W+IEP +P Sbjct: 323 PVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP 361 Score = 26.2 bits (56), Expect(2) = 1e-35 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R I+RGQP+RHLL Sbjct: 180 RHIYRGQPKRHLL 192
>ARFC_ARATH (O23661) Auxin response factor 3 (Protein ETTIN)| Length = 608 Score = 132 bits (331), Expect(2) = 1e-32 Identities = 70/158 (44%), Positives = 94/158 (59%), Gaps = 1/158 (0%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTM 257 K+LV+GDA +FLRG+ G+LR+GVRRA + M+ + HAI+T ++ Sbjct: 235 KKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAHAISTHSV 294 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F++ Y P+ S S FIIP K+ + V + IG RFK R E E+A E+R G I G +LD Sbjct: 295 FSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGIISGISDLD 354 Query: 438 QL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASS 548 + WP S WR L VRWD+ RVSPWEIEP+ S Sbjct: 355 PIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGS 392 Score = 27.3 bits (59), Expect(2) = 1e-32 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R I+RGQPRRHLL Sbjct: 212 RHIYRGQPRRHLL 224
>ARFP_ARATH (Q93YR9) Auxin response factor 16| Length = 670 Score = 84.0 bits (206), Expect(2) = 1e-17 Identities = 64/202 (31%), Positives = 92/202 (45%), Gaps = 36/202 (17%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRAMRQ------------------------LXXXXXX 185 K+LVAGD+ +F+R E+G+L VG+RRA R L Sbjct: 196 KKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLREDESN 255 Query: 186 XXXXXXMHLG----------VLATAWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVK 335 L V+ A AI+ + VYY PR S SEF + +++ Sbjct: 256 SLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYY-PRASTSEFCVKALDARAAMR 314 Query: 336 NIYSIGTRFKMRFEGEEAPE-QRFTGTIVGSDNLDQL-WPESSWRSLKVRWDESSTIPRP 509 + G RFKM FE E++ F GT+ + D + WP S WR L+V WDE + Sbjct: 315 IPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNV 374 Query: 510 DRVSPWEIEPASSPPVNPLPLS 575 RV+PW +E S+ V+P+PL+ Sbjct: 375 KRVNPWLVELVSN--VHPIPLT 394 Score = 25.0 bits (53), Expect(2) = 1e-17 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R I+RG PRRHLL Sbjct: 173 RHIYRGTPRRHLL 185
>ARFJ_ARATH (Q9SKN5) Auxin response factor 10| Length = 693 Score = 82.8 bits (203), Expect(2) = 3e-17 Identities = 58/197 (29%), Positives = 82/197 (41%), Gaps = 38/197 (19%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRRA---------------------------------- 155 K+L+AGD+ +FLR ESG+L VG+RRA Sbjct: 191 KKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDESTTTTSKL 250 Query: 156 --MRQLXXXXXXXXXXXXMHLGVLATAWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTES 329 M++ + + +A A F V Y PR S EF + + Sbjct: 251 MMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCVKAADVRSA 310 Query: 330 VKNIYSIGTRFKMRFEGEEAPE-QRFTGTIVGSDNLDQL-WPESSWRSLKVRWDESSTIP 503 ++ + G RFKM FE E++ F GT+ D + WP S WR L+V WDE + Sbjct: 311 MRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQ 370 Query: 504 RPDRVSPWEIEPASSPP 554 RVSPW +E S+ P Sbjct: 371 NVKRVSPWLVELVSNMP 387 Score = 25.0 bits (53), Expect(2) = 3e-17 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R I+RG PRRHLL Sbjct: 168 RHIYRGTPRRHLL 180
>ARFQ_ARATH (Q84WU6) Auxin response factor 17| Length = 585 Score = 61.2 bits (147), Expect(2) = 6e-11 Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 30/186 (16%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVRR----------------------AMRQLXXXXXXXX 191 K+L+AGD+ +F+R + E+ +GVRR + + Sbjct: 195 KKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDDGSP 254 Query: 192 XXXXMHLG----VLATAWHAINTKTM---FTVYYKPRTSRSEFIIPYDKYTESVKNIYSI 350 G AIN + F V + P SEF++ + S+ ++ Sbjct: 255 KKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTP 314 Query: 351 GTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLKVRWDESSTIPRPDRVSPW 527 GTR KM E E++ + IV S + W S W+ L++ WDE + RV+PW Sbjct: 315 GTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQNVKRVNPW 374 Query: 528 EIEPAS 545 ++E A+ Sbjct: 375 QVEIAA 380 Score = 25.0 bits (53), Expect(2) = 6e-11 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +2 Query: 8 RGIFRGQPRRHLL 46 R I+RG PRRHLL Sbjct: 172 RHIYRGTPRRHLL 184
>ARFW_ARATH (Q9LP07) Putative auxin response factor 23| Length = 222 Score = 39.3 bits (90), Expect = 0.008 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +3 Query: 78 KRLVAGDAFIFLRGESGELRVGVR 149 K+LV GD +F RGE+GELRVG+R Sbjct: 199 KKLVVGDVIVFARGETGELRVGIR 222
>BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing protein 1| (WD-repeat protein 9) Length = 2304 Score = 37.4 bits (85), Expect = 0.032 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = +3 Query: 408 GTIVGSDNLDQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP 539 GT++ D +P+S ++ VRWD + T +++SPW++EP Sbjct: 1085 GTVLSQDPYQPQYPDSHFQCYIVRWDNTET----EKLSPWDMEP 1124
>BRWD1_HUMAN (Q9NSI6) Bromodomain and WD-repeat domain-containing protein 1| (WD-repeat protein 9) Length = 2320 Score = 35.8 bits (81), Expect = 0.092 Identities = 20/94 (21%), Positives = 45/94 (47%) Frame = +3 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLD 437 F++ Y +F++ Y E+ + + RF+ + + + GT++ + Sbjct: 1039 FSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCDRFRSIID-----DAWWFGTVLSQEPYQ 1093 Query: 438 QLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP 539 +P+S ++ VRWD + +++SPW++EP Sbjct: 1094 PQYPDSHFQCYIVRWDNTEI----EKLSPWDMEP 1123
>Y1099_STAAR (Q6GHW0) UPF0348 protein SAR1099| Length = 379 Score = 33.1 bits (74), Expect = 0.60 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Frame = +3 Query: 231 WHAINTKTMFTVYYKPRTSRSEFIIPYDKY------TESVKNIYSIGTRFKMRFE 377 WH + K + +Y P + ++ I PY KY TES+KNIY++ F+ R + Sbjct: 210 WHHVVPKDIQHLYVTPHITLNQ-IFPYLKYQIIAMTTESLKNIYTVTEGFENRLK 263
>M940_ARATH (P92530) Hypothetical mitochondrial protein AtMg00940 (ORF164)| Length = 164 Score = 33.1 bits (74), Expect = 0.60 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = +3 Query: 258 FTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPE-QRFTGTIVGSDNL 434 F V Y P S+F++ + S+ ++ GTR KM E E++ F G + + Sbjct: 80 FEVVYYPTAGWSDFVVKAEDVEASMAIFWTPGTRVKMAMETEDSSRITWFQGIVFYTYQE 139 Query: 435 DQLWPESSWRSLKVR 479 W S W S + + Sbjct: 140 TGPWRGSPWNSFRYK 154
>Y974_STAAN (Q7A658) UPF0348 protein SA0974| Length = 379 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Frame = +3 Query: 231 WHAINTKTMFTVYYKPRTSRSEFIIPYDKY------TESVKNIYSIGTRFKMRFE 377 WH + K + +Y P + ++ I PY KY T+S+KNIY++ F+ R + Sbjct: 210 WHHVVPKDIQHLYVTPHITLNQ-IFPYLKYQIIAMTTDSLKNIYTVTEGFENRLK 263
>Y1135_STAAC (Q5HGV8) UPF0348 protein SACOL1135| Length = 379 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Frame = +3 Query: 231 WHAINTKTMFTVYYKPRTSRSEFIIPYDKY------TESVKNIYSIGTRFKMRFE 377 WH + K + +Y P + ++ I PY KY T+S+KNIY++ F+ R + Sbjct: 210 WHHVVPKDIQHLYVTPHITLNQ-IFPYLKYQIIAMTTDSLKNIYTVTEGFENRLK 263
>Y1126_STAAM (Q99UX8) UPF0348 protein SAV1126| Length = 379 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Frame = +3 Query: 231 WHAINTKTMFTVYYKPRTSRSEFIIPYDKY------TESVKNIYSIGTRFKMRFE 377 WH + K + +Y P + ++ I PY KY T+S+KNIY++ F+ R + Sbjct: 210 WHHVVPKDIQHLYVTPHITLNQ-IFPYLKYQIIAMTTDSLKNIYTVTEGFENRLK 263
>Y1060_STAAS (Q6GA89) UPF0348 protein SAS1060| Length = 379 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Frame = +3 Query: 231 WHAINTKTMFTVYYKPRTSRSEFIIPYDKY------TESVKNIYSIGTRFKMRFE 377 WH + K + +Y P + ++ I PY KY T+S+KNIY++ F+ R + Sbjct: 210 WHHVVPKDIQHLYVTPHITLNQ-IFPYLKYQIIAMTTDSLKNIYTVTEGFENRLK 263
>Y1008_STAAW (Q7A154) UPF0348 protein MW1008| Length = 379 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Frame = +3 Query: 231 WHAINTKTMFTVYYKPRTSRSEFIIPYDKY------TESVKNIYSIGTRFKMRFE 377 WH + K + +Y P + ++ I PY KY T+S+KNIY++ F+ R + Sbjct: 210 WHHVVPKDIQHLYVTPHITLNQ-IFPYLKYQIIAMTTDSLKNIYTVTEGFENRLK 263
>NU2M_ANOAL (Q33636) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) (Fragment) Length = 170 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +3 Query: 252 TMFTVYYKPRTSRSEFIIPYDKYTESVKNIYSI 350 T+ T+Y+ R S S F++ Y K T +KNIYS+ Sbjct: 111 TLITLYFYLRLSYSIFMLNYQKNTWMLKNIYSM 143
>H15_DROME (Q94890) T-box protein H15| Length = 660 Score = 31.6 bits (70), Expect = 1.7 Identities = 17/40 (42%), Positives = 20/40 (50%) Frame = +3 Query: 369 RFEGEEAPEQRFTGTIVGSDNLDQLWPESSWRSLKVRWDE 488 R EE+P Q+ T IVGS N D L P K WD+ Sbjct: 250 RLSPEESPAQQPTPKIVGSCNCDDLTPVQCHLETKELWDK 289
>BYN_DROME (P55965) T-related protein (Trp) (Protein brachyenteron)| Length = 697 Score = 31.2 bits (69), Expect = 2.3 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Frame = -3 Query: 568 GSGLTGGDEAGSISQGETLSGRGIVDDSSQRTLRDLQLD---SGHNWSRLSLPTMVPVNL 398 G G+ G S SG VD S ++ +G+ W+ S+P +P+N+ Sbjct: 403 GGGIGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSSWQSNGNYWNATSVPGPMPMNV 462 Query: 397 CSGASSPSN 371 CSG + S+ Sbjct: 463 CSGRNISSH 471
>SEPR_MOUSE (P97321) Seprase (EC 3.4.21.-) (Fibroblast activation protein| alpha) (Integral membrane serine protease) Length = 761 Score = 30.0 bits (66), Expect = 5.0 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +2 Query: 203 YAPWSPCNCMACYQHKNHVHCLLQTQDKPFRVHYT 307 Y WSP Y ++N+++ + D PF++ YT Sbjct: 152 YLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITYT 186
>YCXE_CYAPA (P48335) Hypothetical 21.2 kDa protein in ycf23-apcF intergenic| region (ORF179) Length = 179 Score = 29.3 bits (64), Expect = 8.6 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = -3 Query: 574 ERGSGLTGGDEAGSISQGETLSGRGIVDDSSQRTLRDLQLDSGHN-WSRLSLPTMVPVNL 398 E+G +T G EAG + GE + + Q R +D HN W +L + V VNL Sbjct: 84 EKGHDITFGTEAGYVFFGEYI-------NMDQLRKRFFYMDHLHNLWREGNLFSEVHVNL 136 Query: 397 CSGASSPSNLILNLVPI 347 A +L N PI Sbjct: 137 TKSAHCYIDLTENKTPI 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,363,598 Number of Sequences: 219361 Number of extensions: 1706109 Number of successful extensions: 5599 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5556 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
