| Clone Name | baal11l09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY902381.1| Triticum aestivum auxin response factor 2 mRNA, partial cds Length = 608 Score = 729 bits (368), Expect = 0.0 Identities = 435/456 (95%), Gaps = 1/456 (0%) Strand = Plus / Plus Query: 14 attttccgcgggcaacctaggaggcatctccttcagnagcggctggagtgtctttgtcag 73 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 150 attttccgcgggcaacctaggaggcatctccttcag-agcggctggagcgtctttgtcag 208 Query: 74 ttccaaaaggcttgtcgctggggacgccttcattttcctcagaggagagagcggtgagct 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 209 ttccaaaaggcttgtcgctggggacgccttcattttcctcagaggagagagcggcgagct 268 Query: 134 tcgtgttggtgtgaggcgggctatgagacagctttccaacatagcttcttcagtcatatc 193 |||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 269 tcgtgttggtgttaggcgggctatgagacagctctccaatatagcttcttcagtcatatc 328 Query: 194 tagtcatagtatgcaccttggagtccttgcaactgcatggcatgctatcaacacaaaaac 253 |||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 329 tagtcacagcatgcaccttggagtccttgcaactgcatggcacgctatcaacacaaaaac 388 Query: 254 catgttcactgtctactacaaacccaggacaagccgttcagagttcattataccatatga 313 ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| || Sbjct: 389 catgttcactgtctactacaagcctaggacaagccgttcagagttcattataccatacga 448 Query: 314 caagtatacggagtctgttaaaaacatttattctattgggacgaggttcaagatgaggtt 373 || |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 taaatatatggactctgttaaaaacatttattctattgggacgaggttcaagatgaggtt 508 Query: 374 tgaaggggaagaggcaccagagcaaaggtttactggtaccatagttggcagtgataatct 433 |||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 509 tgaaggggaagaggcaccagagcagaggtttactggcaccatagtgggcagtgataatct 568 Query: 434 tgaccaattgtggccagaatcaagctggagatccct 469 ||||||||||||||| |||||||| ||||||||||| Sbjct: 569 tgaccaattgtggcctgaatcaagttggagatccct 604
>ref|NM_189992.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 Score = 587 bits (296), Expect = e-164 Identities = 492/556 (88%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 20 cgcgggcaacctaggaggcatctccttcagnagcggctggagtgtctttgtcagttccaa 79 ||||||||||| |||||||||||||||||| || || |||||||| |||||||||||||| Sbjct: 541 cgcgggcaaccgaggaggcatctccttcag-agtggttggagtgtgtttgtcagttccaa 599 Query: 80 aaggcttgtcgctggggacgccttcattttcctcagaggagagagcggtgagcttcgtgt 139 ||||||||| |||||||| || |||||||||||||||||||||| ||||| || ||||| Sbjct: 600 aaggcttgttgctggggatgctttcattttcctcagaggagagaatggtgaactccgtgt 659 Query: 140 tggtgtgaggcgggctatgagacagctttccaacatagcttcttcagtcatatctagtca 199 |||||| || || |||||||| ||||| ||||| | ||||||||||||||||||| || Sbjct: 660 tggtgttagacgagctatgaggcagctgtccaatgtgccttcttcagtcatatctagcca 719 Query: 200 tagtatgcaccttggagtccttgcaactgcatggcatgctatcaacacaaaaaccatgtt 259 || |||||||| ||||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 720 aagcatgcacctgggagtccttgctactgcatggcatgctatcaacacgaagagtatgtt 779 Query: 260 cactgtctactacaaacccaggacaagccgttcagagttcattataccatatgacaagta 319 ||| |||||||||||||| ||||| |||| |||||||||||||||||||||||| |||| Sbjct: 780 caccgtctactacaaacctaggacgagcccttcagagttcattataccatatgatcagta 839 Query: 320 tacggagtctgttaaaaacatttattctattgggacgaggttcaagatgaggtttgaagg 379 || |||||| || ||||||| ||| ||| |||||| |||||||| ||||||||||||||| Sbjct: 840 tatggagtccgtcaaaaacaattactctgttgggatgaggttcaggatgaggtttgaagg 899 Query: 380 ggaagaggcaccagagcaaaggtttactggtaccatagttggcagtgataatcttgacca 439 ||||||||||||||||| |||||||||||||| ||| |||||||||| ||||| |||| Sbjct: 900 agaagaggcaccagagcagaggtttactggtactataattggcagtgagaatctcgaccc 959 Query: 440 attgtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactat 499 | ||||||| |||||||| ||||||||||| |||||||| |||||||| | |||||||| Sbjct: 960 agtgtggcctgaatcaagttggagatccctgaaggtgcggtgggatgaaccatcaactat 1019 Query: 500 tccacggcccgatagagtctctccttgggaaatagagcccgcttcatcacctcctgttaa 559 ||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1020 tccgcggccagatagagtctctccttggaaaatagagcctgcttcatcacctcctgttaa 1079 Query: 560 cccgcttcctctttct 575 ||| |||||||||||| Sbjct: 1080 cccccttcctctttct 1095
>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full insert sequence Length = 3151 Score = 587 bits (296), Expect = e-164 Identities = 492/556 (88%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 20 cgcgggcaacctaggaggcatctccttcagnagcggctggagtgtctttgtcagttccaa 79 ||||||||||| |||||||||||||||||| || || |||||||| |||||||||||||| Sbjct: 763 cgcgggcaaccgaggaggcatctccttcag-agtggttggagtgtgtttgtcagttccaa 821 Query: 80 aaggcttgtcgctggggacgccttcattttcctcagaggagagagcggtgagcttcgtgt 139 ||||||||| |||||||| || |||||||||||||||||||||| ||||| || ||||| Sbjct: 822 aaggcttgttgctggggatgctttcattttcctcagaggagagaatggtgaactccgtgt 881 Query: 140 tggtgtgaggcgggctatgagacagctttccaacatagcttcttcagtcatatctagtca 199 |||||| || || |||||||| ||||| ||||| | ||||||||||||||||||| || Sbjct: 882 tggtgttagacgagctatgaggcagctgtccaatgtgccttcttcagtcatatctagcca 941 Query: 200 tagtatgcaccttggagtccttgcaactgcatggcatgctatcaacacaaaaaccatgtt 259 || |||||||| ||||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 942 aagcatgcacctgggagtccttgctactgcatggcatgctatcaacacgaagagtatgtt 1001 Query: 260 cactgtctactacaaacccaggacaagccgttcagagttcattataccatatgacaagta 319 ||| |||||||||||||| ||||| |||| |||||||||||||||||||||||| |||| Sbjct: 1002 caccgtctactacaaacctaggacgagcccttcagagttcattataccatatgatcagta 1061 Query: 320 tacggagtctgttaaaaacatttattctattgggacgaggttcaagatgaggtttgaagg 379 || |||||| || ||||||| ||| ||| |||||| |||||||| ||||||||||||||| Sbjct: 1062 tatggagtccgtcaaaaacaattactctgttgggatgaggttcaggatgaggtttgaagg 1121 Query: 380 ggaagaggcaccagagcaaaggtttactggtaccatagttggcagtgataatcttgacca 439 ||||||||||||||||| |||||||||||||| ||| |||||||||| ||||| |||| Sbjct: 1122 agaagaggcaccagagcagaggtttactggtactataattggcagtgagaatctcgaccc 1181 Query: 440 attgtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactat 499 | ||||||| |||||||| ||||||||||| |||||||| |||||||| | |||||||| Sbjct: 1182 agtgtggcctgaatcaagttggagatccctgaaggtgcggtgggatgaaccatcaactat 1241 Query: 500 tccacggcccgatagagtctctccttgggaaatagagcccgcttcatcacctcctgttaa 559 ||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1242 tccgcggccagatagagtctctccttggaaaatagagcctgcttcatcacctcctgttaa 1301 Query: 560 cccgcttcctctttct 575 ||| |||||||||||| Sbjct: 1302 cccccttcctctttct 1317
>dbj|AB071293.1| Oryza sativa OsARF2 mRNA for auxin response factor 2, partial cds Length = 2376 Score = 587 bits (296), Expect = e-164 Identities = 492/556 (88%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 20 cgcgggcaacctaggaggcatctccttcagnagcggctggagtgtctttgtcagttccaa 79 ||||||||||| |||||||||||||||||| || || |||||||| |||||||||||||| Sbjct: 505 cgcgggcaaccgaggaggcatctccttcag-agtggttggagtgtgtttgtcagttccaa 563 Query: 80 aaggcttgtcgctggggacgccttcattttcctcagaggagagagcggtgagcttcgtgt 139 ||||||||| |||||||| || |||||||||||||||||||||| ||||| || ||||| Sbjct: 564 aaggcttgttgctggggatgctttcattttcctcagaggagagaatggtgaactccgtgt 623 Query: 140 tggtgtgaggcgggctatgagacagctttccaacatagcttcttcagtcatatctagtca 199 |||||| || || |||||||| ||||| ||||| | ||||||||||||||||||| || Sbjct: 624 tggtgttagacgagctatgaggcagctgtccaatgtgccttcttcagtcatatctagcca 683 Query: 200 tagtatgcaccttggagtccttgcaactgcatggcatgctatcaacacaaaaaccatgtt 259 || |||||||| ||||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 684 aagcatgcacctgggagtccttgctactgcatggcatgctatcaacacgaagagtatgtt 743 Query: 260 cactgtctactacaaacccaggacaagccgttcagagttcattataccatatgacaagta 319 ||| |||||||||||||| ||||| |||| |||||||||||||||||||||||| |||| Sbjct: 744 caccgtctactacaaacctaggacgagcccttcagagttcattataccatatgatcagta 803 Query: 320 tacggagtctgttaaaaacatttattctattgggacgaggttcaagatgaggtttgaagg 379 || |||||| || ||||||| ||| ||| |||||| |||||||| ||||||||||||||| Sbjct: 804 tatggagtccgtcaaaaacaattactctgttgggatgaggttcaggatgaggtttgaagg 863 Query: 380 ggaagaggcaccagagcaaaggtttactggtaccatagttggcagtgataatcttgacca 439 ||||||||||||||||| |||||||||||||| ||| |||||||||| ||||| |||| Sbjct: 864 agaagaggcaccagagcagaggtttactggtactataattggcagtgagaatctcgaccc 923 Query: 440 attgtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactat 499 | ||||||| |||||||| ||||||||||| |||||||| |||||||| | |||||||| Sbjct: 924 agtgtggcctgaatcaagttggagatccctgaaggtgcggtgggatgaaccatcaactat 983 Query: 500 tccacggcccgatagagtctctccttgggaaatagagcccgcttcatcacctcctgttaa 559 ||| ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 984 tccgcggccagatagagtctctccttggaaaatagagcctgcttcatcacctcctgttaa 1043 Query: 560 cccgcttcctctttct 575 ||| |||||||||||| Sbjct: 1044 cccccttcctctttct 1059
>gb|AY104007.1| Zea mays PCO114881 mRNA sequence Length = 2029 Score = 299 bits (151), Expect = 5e-78 Identities = 301/351 (85%) Strand = Plus / Plus Query: 225 actgcatggcatgctatcaacacaaaaaccatgttcactgtctactacaaacccaggaca 284 ||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||| Sbjct: 9 actgcatggcacgctattaacacaaagtccatgttcactgtctactacaaacctaggacg 68 Query: 285 agccgttcagagttcattataccatatgacaagtatacggagtctgttaaaaacatttat 344 |||| |||||||||||| ||||||||||| | |||| |||||| || ||||||| |||| Sbjct: 69 agcccttcagagttcatcataccatatgatcaatatatggagtcagtaaaaaacaattat 128 Query: 345 tctattgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggttt 404 |||||||||| ||| |||| |||||||||||||||||||||||| || ||||| |||||| Sbjct: 129 tctattgggatgagattcaggatgaggtttgaaggggaagaggcccccgagcagaggttt 188 Query: 405 actggtaccatagttggcagtgataatcttgaccaattgtggccagaatcaagctggaga 464 |||||||| ||||||||| |||| |||||||||| | | ||||| || || || |||||| Sbjct: 189 actggtacaatagttggctgtgaaaatcttgacccactatggcctgattccagttggaga 248 Query: 465 tccctcaaggtgcgttgggatgagtcgtcaactattccacggcccgatagagtctctcct 524 | | | |||||||| ||||||||| | || ||||| || ||||| |||| |||||||| Sbjct: 249 tacttgaaggtgcgctgggatgagccttctactatcccgcggccagataaggtctctccc 308 Query: 525 tgggaaatagagcccgcttcatcacctcctgttaacccgcttcctctttct 575 ||| | |||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 309 tggaagatagagcctgcttcatcacctcctgttaatcctctccctctttct 359
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 145 bits (73), Expect = 2e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 113 cagaggagagagcggtgagcttcgtgttggtgtgaggcgggctatgagacagctttccaa 172 ||||||||||| ||||| || ||||||||||| || || |||||||| ||||| ||||| Sbjct: 40689810 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 40689869 Query: 173 catagcttcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatg 232 | ||||||||||||||||||| || || |||||||| ||||||||||| |||||||| Sbjct: 40689870 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 40689929 Query: 233 gcatgctatcaacacaaaaaccatgttcactgtctactacaaacc 277 ||||||||||||||| || | |||||||| |||||||||||||| Sbjct: 40689930 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacc 40689974 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 472 aggtgcgttgggatgagtcgtcaactattccacggcccgatagagtctctccttgggaaa 531 ||||||| |||||||| | ||||||||||| ||||| |||||||||||||||||| ||| Sbjct: 40690480 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 40690539 Query: 532 tagagcccgcttcatcacctcctgttaacccgcttcctctttct 575 ||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 40690540 tagagcctgcttcatcacctcctgttaacccccttcctctttct 40690583 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 279 aggacaagccgttcagagttcattataccatatgacaagtatacggagtctgttaaaaac 338 ||||| |||| |||||||||||||||||||||||| |||||| |||||| || |||||| Sbjct: 40690119 aggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaac 40690178 Query: 339 atttattctattgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaa 398 | ||| ||| |||||| |||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 40690179 aattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagcag 40690238 Query: 399 aggt 402 |||| Sbjct: 40690239 aggt 40690242 Score = 113 bits (57), Expect = 7e-22 Identities = 85/93 (91%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 23 gggcaacctaggaggcatctccttcagnagcggctggagtgtctttgtcagttccaaaag 82 |||||||| |||||||||||||||||| || || |||||||| ||||||||||||||||| Sbjct: 40689647 gggcaaccgaggaggcatctccttcag-agtggttggagtgtgtttgtcagttccaaaag 40689705 Query: 83 gcttgtcgctggggacgccttcattttcctcag 115 |||||| |||||||| || |||||||||||||| Sbjct: 40689706 gcttgttgctggggatgctttcattttcctcag 40689738 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 399 aggtttactggtaccatagttggcagtgataatcttgaccaattgtggccagaatcaagc 458 |||||||||||||| ||| |||||||||| ||||| |||| | ||||||| |||||||| Sbjct: 40690328 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 40690387 Query: 459 tggagatccctcaaggt 475 ||||||||||| ||||| Sbjct: 40690388 tggagatccctgaaggt 40690404 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 356 gaggttcaagatgaggtttgaaggggaaga 385 ||||||||||||||| |||||||||||||| Sbjct: 7548100 gaggttcaagatgagttttgaaggggaaga 7548129
>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0093F16 Length = 160925 Score = 145 bits (73), Expect = 2e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 113 cagaggagagagcggtgagcttcgtgttggtgtgaggcgggctatgagacagctttccaa 172 ||||||||||| ||||| || ||||||||||| || || |||||||| ||||| ||||| Sbjct: 131788 cagaggagagaatggtgaactccgtgttggtgttagacgagctatgaggcagctgtccaa 131847 Query: 173 catagcttcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatg 232 | ||||||||||||||||||| || || |||||||| ||||||||||| |||||||| Sbjct: 131848 tgtgccttcttcagtcatatctagccaaagcatgcacctgggagtccttgctactgcatg 131907 Query: 233 gcatgctatcaacacaaaaaccatgttcactgtctactacaaacc 277 ||||||||||||||| || | |||||||| |||||||||||||| Sbjct: 131908 gcatgctatcaacacgaagagtatgttcaccgtctactacaaacc 131952 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 472 aggtgcgttgggatgagtcgtcaactattccacggcccgatagagtctctccttgggaaa 531 ||||||| |||||||| | ||||||||||| ||||| |||||||||||||||||| ||| Sbjct: 132458 aggtgcggtgggatgaaccatcaactattccgcggccagatagagtctctccttggaaaa 132517 Query: 532 tagagcccgcttcatcacctcctgttaacccgcttcctctttct 575 ||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 132518 tagagcctgcttcatcacctcctgttaacccccttcctctttct 132561 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 279 aggacaagccgttcagagttcattataccatatgacaagtatacggagtctgttaaaaac 338 ||||| |||| |||||||||||||||||||||||| |||||| |||||| || |||||| Sbjct: 132097 aggacgagcccttcagagttcattataccatatgatcagtatatggagtccgtcaaaaac 132156 Query: 339 atttattctattgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaa 398 | ||| ||| |||||| |||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 132157 aattactctgttgggatgaggttcaggatgaggtttgaaggagaagaggcaccagagcag 132216 Query: 399 aggt 402 |||| Sbjct: 132217 aggt 132220 Score = 113 bits (57), Expect = 7e-22 Identities = 85/93 (91%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 23 gggcaacctaggaggcatctccttcagnagcggctggagtgtctttgtcagttccaaaag 82 |||||||| |||||||||||||||||| || || |||||||| ||||||||||||||||| Sbjct: 131625 gggcaaccgaggaggcatctccttcag-agtggttggagtgtgtttgtcagttccaaaag 131683 Query: 83 gcttgtcgctggggacgccttcattttcctcag 115 |||||| |||||||| || |||||||||||||| Sbjct: 131684 gcttgttgctggggatgctttcattttcctcag 131716 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 399 aggtttactggtaccatagttggcagtgataatcttgaccaattgtggccagaatcaagc 458 |||||||||||||| ||| |||||||||| ||||| |||| | ||||||| |||||||| Sbjct: 132306 aggtttactggtactataattggcagtgagaatctcgacccagtgtggcctgaatcaagt 132365 Query: 459 tggagatccctcaaggt 475 ||||||||||| ||||| Sbjct: 132366 tggagatccctgaaggt 132382
>gb|DQ340255.1| Lycopersicon esculentum auxin response factor 2 (ARF2) mRNA, complete cds Length = 2719 Score = 141 bits (71), Expect = 3e-30 Identities = 194/235 (82%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgctatcaacaca 248 ||||| |||||||| ||||| ||||| || |||||||| || |||||||| || | ||| Sbjct: 900 atatccagtcatagcatgcatcttggtgtacttgcaacagcttggcatgccattcaaaca 959 Query: 249 aaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttcattatacca 308 ||||| ||||||||||| || ||||| ||||||||||||| | | ||||| || | ||| Sbjct: 960 aaaacgatgttcactgtgtattacaagcccaggacaagccctgctgagtttatagttcca 1019 Query: 309 tatgacaagtatacggagtctgttaaaaacatttattctattgggacgaggttcaagatg 368 |||||| | |||| ||| ||||| || || | ||| |||||||| | |||||| |||||| Sbjct: 1020 tatgaccactatatggaatctgtgaagaataattactctattggaatgaggtttaagatg 1079 Query: 369 aggtttgaaggggaagaggcaccagagcaaaggtttactggtaccatagttggca 423 ||||| ||||| ||||| || |||||||||||||||||||| || || ||||||| Sbjct: 1080 aggttcgaaggtgaagaagctccagagcaaaggtttactggaactattgttggca 1134 Score = 97.6 bits (49), Expect = 4e-17 Identities = 116/137 (84%), Gaps = 1/137 (0%) Strand = Plus / Plus Query: 29 cctaggaggcatctccttcagnagcggctggagtgtctttgtcagttccaaaaggcttgt 88 |||||||||||||| |||||| || || |||||||||||||| ||||| || |||||||| Sbjct: 741 cctaggaggcatcttcttcag-agtggttggagtgtctttgttagttcgaagaggcttgt 799 Query: 89 cgctggggacgccttcattttcctcagaggagagagcggtgagcttcgtgttggtgtgag 148 |||||||| || ||||| || || ||||| |||| || ||||||||||||||||| || Sbjct: 800 tgctggggatgcattcatatttcttagaggtgagaatggggagcttcgtgttggtgttag 859 Query: 149 gcgggctatgagacagc 165 || || |||||||||| Sbjct: 860 acgtgccatgagacagc 876
>gb|AF140228.2| Oryza sativa (indica cultivar-group) putative auxin response factor 1 mRNA, partial cds Length = 2574 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctc 113 ||||||||||| ||||| ||| ||||| ||||||| |||||||| ||||| || || ||| Sbjct: 646 ggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatctttctc 705 Query: 114 agaggagagagcggtgagcttcgtgttggtgtgaggcgggctatgagacagctttccaac 173 ||||| |||| ||| || || |||||||| || ||||| || ||||| |||| | || Sbjct: 706 agaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaat 765 Query: 174 atagcttcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatgg 233 | | |||||||| ||||| || || || ||||| ||||| || ||||| || |||||| Sbjct: 766 gttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatgg 825 Query: 234 catgctatcaacacaaaaaccatgttcactgtctactacaaacccaggacaag 286 |||||| | |||||| ||||||||||||||||||||||| || |||||||| Sbjct: 826 catgctgttaacacagggaccatgttcactgtctactacaagcctaggacaag 878 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 348 attgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttact 407 ||||||| ||| || ||||||||||||||| | |||||||| ||||||||||| || ||| Sbjct: 940 attgggatgagatttaagatgaggtttgaaagtgaagaggctccagagcaaagattcact 999 Query: 408 gg 409 || Sbjct: 1000 gg 1001
>dbj|AK071997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091N24, full insert sequence Length = 3981 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctc 113 ||||||||||| ||||| ||| ||||| ||||||| |||||||| ||||| || || ||| Sbjct: 1689 ggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatctttctc 1748 Query: 114 agaggagagagcggtgagcttcgtgttggtgtgaggcgggctatgagacagctttccaac 173 ||||| |||| ||| || || |||||||| || ||||| || ||||| |||| | || Sbjct: 1749 agaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaat 1808 Query: 174 atagcttcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatgg 233 | | |||||||| ||||| || || || ||||| ||||| || ||||| || |||||| Sbjct: 1809 gttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatgg 1868 Query: 234 catgctatcaacacaaaaaccatgttcactgtctactacaaacccaggacaag 286 |||||| | |||||| ||||||||||||||||||||||| || |||||||| Sbjct: 1869 catgctgttaacacagggaccatgttcactgtctactacaagcctaggacaag 1921 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 348 attgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttact 407 ||||||| ||| || ||||||||||||||||| |||||||| ||||||||||| || ||| Sbjct: 1983 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaagattcact 2042 Query: 408 gg 409 || Sbjct: 2043 gg 2044
>dbj|AK065936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A03, full insert sequence Length = 3338 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctc 113 ||||||||||| ||||| ||| ||||| ||||||| |||||||| ||||| || || ||| Sbjct: 880 ggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctttatctttctc 939 Query: 114 agaggagagagcggtgagcttcgtgttggtgtgaggcgggctatgagacagctttccaac 173 ||||| |||| ||| || || |||||||| || ||||| || ||||| |||| | || Sbjct: 940 agaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaat 999 Query: 174 atagcttcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatgg 233 | | |||||||| ||||| || || || ||||| ||||| || ||||| || |||||| Sbjct: 1000 gttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatgg 1059 Query: 234 catgctatcaacacaaaaaccatgttcactgtctactacaaacccaggacaag 286 |||||| | |||||| ||||||||||||||||||||||| || |||||||| Sbjct: 1060 catgctgttaacacagggaccatgttcactgtctactacaagcctaggacaag 1112 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 363 aagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||||||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 1189 aagatgaggtttgaaggtgaagaggctccagagcaaagattcactgg 1235
>emb|AJ306306.1|OSA306306 Oryza sativa subsp. japonica mRNA for auxin response factor 1 (arf1 gene) Length = 2511 Score = 97.6 bits (49), Expect = 4e-17 Identities = 187/233 (80%) Strand = Plus / Plus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctc 113 ||||||||||| || || ||| ||||| ||||||| |||||||| ||||| || || ||| Sbjct: 598 ggctggagtgtgttcgttagtgccaaacggcttgttgctggggatgcctttatctttctc 657 Query: 114 agaggagagagcggtgagcttcgtgttggtgtgaggcgggctatgagacagctttccaac 173 ||||| |||| ||| || || |||||||| || ||||| || ||||| |||| | || Sbjct: 658 agaggtgagaacggggaactgcgtgttggagtcaggcgtgcaatgaggcagcaaactaat 717 Query: 174 atagcttcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatgg 233 | | |||||||| ||||| || || || ||||| ||||| || ||||| || |||||| Sbjct: 718 gttccatcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatgg 777 Query: 234 catgctatcaacacaaaaaccatgttcactgtctactacaaacccaggacaag 286 |||||| | |||||| ||||||||||||||||||||||| || |||||||| Sbjct: 778 catgctgttaacacagggaccatgttcactgtctactacaagcctaggacaag 830 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 348 attgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttact 407 ||||||| ||| || ||||||||||||||||| |||||||| ||||||||||| || ||| Sbjct: 892 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaagattcact 951 Query: 408 gg 409 || Sbjct: 952 gg 953
>ref|NM_125593.2| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor AT5G62000 (ARF2) transcript variant AT5G62000.2 mRNA, complete cds Length = 3384 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1195 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1254 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1255 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1314 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1315 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1374 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1375 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1424 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1461 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1520 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1521 tcgacctgatagagtatctccgtggaaagtagagcc 1556
>ref|NM_203251.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2) AT5G62000 (ARF2) transcript variant AT5G62000.3 mRNA, complete cds Length = 3387 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1195 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1254 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1255 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1314 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1315 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1374 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1375 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1424 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1461 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1520 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1521 tcgacctgatagagtatctccgtggaaagtagagcc 1556
>ref|NM_180913.1| Arabidopsis thaliana ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor AT5G62000 (ARF2) transcript variant AT5G62000.1 mRNA, complete cds Length = 3513 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1321 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1380 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1381 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1440 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1441 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1500 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1501 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1550 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1587 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1646 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1647 tcgacctgatagagtatctccgtggaaagtagagcc 1682
>gb|BT001072.1| Arabidopsis thaliana At5g62000/mtg10_20 mRNA, complete cds Length = 2037 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 820 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 879 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 880 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 939 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 940 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 999 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1000 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1049 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1086 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1145 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1146 tcgacctgatagagtatctccgtggaaagtagagcc 1181
>gb|BT000784.1| Arabidopsis thaliana clone RAFL07-10-G12 (R10939) auxin response factor (At5g62000) mRNA, complete cds Length = 3498 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1321 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1380 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1381 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1440 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1441 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1500 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1501 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1550 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1587 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1646 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1647 tcgacctgatagagtatctccgtggaaagtagagcc 1682
>dbj|AK221305.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-31-F22 Length = 3335 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1129 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1188 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1189 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1248 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1249 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1308 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1309 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1358 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1395 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1454 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1455 tcgacctgatagagtatctccgtggaaagtagagcc 1490
>dbj|AK221282.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-19-K22 Length = 3275 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1108 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1167 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1168 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1227 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1228 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1287 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1288 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1337 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1374 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1433 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1434 tcgacctgatagagtatctccgtggaaagtagagcc 1469
>dbj|AK221277.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-18-M11 Length = 3316 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1110 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1169 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1170 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1229 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1230 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1289 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1290 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1339 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1376 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1435 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1436 tcgacctgatagagtatctccgtggaaagtagagcc 1471
>dbj|AK221274.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-16-M02 Length = 3317 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1158 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1217 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1218 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1277 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1278 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1337 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1338 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1387 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1424 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1483 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1484 tcgacctgatagagtatctccgtggaaagtagagcc 1519
>dbj|AK221254.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-09-L23 Length = 3317 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1158 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1217 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1218 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1277 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1278 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1337 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1338 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1387 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1424 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1483 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1484 tcgacctgatagagtatctccgtggaaagtagagcc 1519
>dbj|AK221252.1| Arabidopsis thaliana mRNA for ARF1-binding protein, complete cds, clone: RAFL24-07-O11 Length = 3317 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1158 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1217 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1218 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1277 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1278 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1337 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1338 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1387 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1424 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1483 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1484 tcgacctgatagagtatctccgtggaaagtagagcc 1519
>gb|AF378862.1|AF378862 Arabidopsis thaliana AT5g62000/mtg10_20 mRNA, complete cds Length = 3171 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 1160 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 1219 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 1220 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 1279 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 1280 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 1339 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1340 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1389 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1426 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1485 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1486 tcgacctgatagagtatctccgtggaaagtagagcc 1521
>gb|AY669787.1| Arabidopsis thaliana clone C105342 ARF2 (At5g62000) mRNA, complete cds Length = 2772 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 820 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgcc 879 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttc 299 || ||| || ||||| || |||||||||||||||||||| |||| || ||||| Sbjct: 880 atttcaacagggactatgtttacagtctactacaaacccaggacgagcccatctgagttt 939 Query: 300 attataccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgagg 359 ||| | || | || |||||| |||||||||||| || | || |||||||| | ||| Sbjct: 940 attgttccgttcgatcagtatatggagtctgttaagaataactactctattggcatgaga 999 Query: 360 ttcaagatgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 1000 ttcaaaatgagatttgaaggcgaagaggctcctgagcagaggtttactgg 1049 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggtgcgttgggatgagtcgtcaactattcc 502 ||||||| |||||| |||||||||||||||||| | ||||||||| | || | |||||| Sbjct: 1086 gtggccaaaatcaaagtggagatccctcaaggtgagatgggatgagacttctagtattcc 1145 Query: 503 acggcccgatagagtctctccttgggaaatagagcc 538 || || |||||||| ||||| ||| || ||||||| Sbjct: 1146 tcgacctgatagagtatctccgtggaaagtagagcc 1181
>dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D19, full insert sequence Length = 3265 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| |||||||| || || |||||||| ||||| || |||||||||||||||||||| Sbjct: 1058 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 1117 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggac 283 | ||||| ||||||||||||||| |||||||| || ||||| Sbjct: 1118 gtgaacactggaaccatgttcactgtgtactacaagccaaggac 1161
>dbj|AK065254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J11, full insert sequence Length = 3100 Score = 79.8 bits (40), Expect = 9e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| |||||||| || || |||||||| ||||| || |||||||||||||||||||| Sbjct: 912 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 971 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggac 283 | ||||| ||||||||||||||| |||||||| || ||||| Sbjct: 972 gtgaacactggaaccatgttcactgtgtactacaagccaaggac 1015
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| |||||||| || || |||||||| ||||| || |||||||||||||||||||| Sbjct: 17615941 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 17615882 Query: 240 atcaacacaaaaaccatgttcactgtctactacaa 274 | ||||| ||||||||||||||| |||||||| Sbjct: 17615881 gtgaacactggaaccatgttcactgtgtactacaa 17615847 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Minus Query: 351 gggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 |||| ||| |||||||||| |||||||| |||||||| |||||||||||| Sbjct: 17615564 gggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaaggt 17615513 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 atgttcactgtctactacaaa 275 ||||||||||||||||||||| Sbjct: 11316071 atgttcactgtctactacaaa 11316051
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| |||||||| || || |||||||| ||||| || |||||||||||||||||||| Sbjct: 17570312 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 17570253 Query: 240 atcaacacaaaaaccatgttcactgtctactacaa 274 | ||||| ||||||||||||||| |||||||| Sbjct: 17570252 gtgaacactggaaccatgttcactgtgtactacaa 17570218 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Minus Query: 351 gggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 |||| ||| |||||||||| |||||||| |||||||| |||||||||||| Sbjct: 17569935 gggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaaggt 17569884 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 atgttcactgtctactacaaa 275 ||||||||||||||||||||| Sbjct: 11315742 atgttcactgtctactacaaa 11315722
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| |||||||| || || |||||||| ||||| || |||||||||||||||||||| Sbjct: 108277 tcttcggtcatatcaagccacagtatgcatcttggtgttcttgcaactgcatggcatgca 108218 Query: 240 atcaacacaaaaaccatgttcactgtctactacaa 274 | ||||| ||||||||||||||| |||||||| Sbjct: 108217 gtgaacactggaaccatgttcactgtgtactacaa 108183 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Minus Query: 351 gggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 |||| ||| |||||||||| |||||||| |||||||| |||||||||||| Sbjct: 107900 gggatgagattcaagatgacatttgaaggcgaagaggctgcagagcaaaggt 107849
>gb|AY106228.1| Zea mays PCO137716 mRNA sequence Length = 910 Score = 73.8 bits (37), Expect = 6e-10 Identities = 184/233 (78%) Strand = Plus / Plus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctc 113 ||||||||||| ||||| ||| ||||| | ||||| ||||| || |||||||| || || Sbjct: 217 ggctggagtgtttttgttagtgccaaacgtcttgttgctggcgatgccttcatctttcta 276 Query: 114 agaggagagagcggtgagcttcgtgttggtgtgaggcgggctatgagacagctttccaac 173 ||||| || || || ||||||||||| || || ||||| || ||||| |||| | || Sbjct: 277 agaggtgatagtggggagcttcgtgtaggagtcaggcgtgccatgaggcagcaagcaaat 336 Query: 174 atagcttcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatgg 233 | | |||||||| ||||| || || || ||||| ||||| || ||||| || |||||| Sbjct: 337 gttccgtcttcagtaatatcaagccacagcatgcatcttggtgttcttgctacagcatgg 396 Query: 234 catgctatcaacacaaaaaccatgttcactgtctactacaaacccaggacaag 286 |||||| | ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 397 catgctgttaacactgggaccatgtttactgtctactacaagcctaggacaag 449 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 366 atgaggtttgaaggggaagaggcaccagagcaaaggtttactggtaccatagttgg 421 |||||||||||||| |||||||| ||||| |||||||| ||||| ||||| ||||| Sbjct: 529 atgaggtttgaaggtgaagaggctccagaacaaaggttcactgggaccattgttgg 584
>gb|BT024075.1| Zea mays clone EL01N0510B07 mRNA sequence Length = 2624 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 |||||||||||||| || || |||||||| ||||| || |||||||| ||||||||||| Sbjct: 568 tcttcagtcatatcaagccacagtatgcatcttggtgttcttgcaacagcatggcatgca 627 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggac 283 | ||||| | ||||||||||||||||||||||| ||||| Sbjct: 628 gtgaacactgggagtatgttcactgtctactacaaaccaaggac 671
>ref|XM_466220.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3110 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 183 tcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgctat 241 ||||| ||||| |||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 1019 tcagtaatatcaagtcatagtatgcatcttggagtcctagcaactgcatcacatgctat 1077
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 |||||||| ||||| || || || ||||| ||||| || ||||| || |||||||||||| Sbjct: 131491 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 131432 Query: 240 atcaacacaaaaaccatgttcactgtctactacaa 274 | |||||| ||||||||||||||||||||||| Sbjct: 131431 gttaacacagggaccatgttcactgtctactacaa 131397 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 348 attgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 ||||||| ||| || ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 131146 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 131092 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgcctt 103 ||||||||||| ||||| ||| ||||| ||||||| |||||||| ||||| Sbjct: 131705 ggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 131656
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 |||||||| ||||| || || || ||||| ||||| || ||||| || |||||||||||| Sbjct: 8260 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 8201 Query: 240 atcaacacaaaaaccatgttcactgtctactacaa 274 | |||||| ||||||||||||||||||||||| Sbjct: 8200 gttaacacagggaccatgttcactgtctactacaa 8166 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 348 attgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 ||||||| ||| || ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 7915 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 7861 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgcctt 103 ||||||||||| ||||| ||| ||||| ||||||| |||||||| ||||| Sbjct: 8474 ggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 8425
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 |||||||| ||||| || || || ||||| ||||| || ||||| || |||||||||||| Sbjct: 40154 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 40095 Query: 240 atcaacacaaaaaccatgttcactgtctactacaa 274 | |||||| ||||||||||||||||||||||| Sbjct: 40094 gttaacacagggaccatgttcactgtctactacaa 40060 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 348 attgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 ||||||| ||| || ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 39809 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 39755 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgcctt 103 ||||||||||| ||||| ||| ||||| ||||||| |||||||| ||||| Sbjct: 40368 ggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 40319
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 |||||||| ||||| || || || ||||| ||||| || ||||| || |||||||||||| Sbjct: 18272895 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 18272836 Query: 240 atcaacacaaaaaccatgttcactgtctactacaa 274 | |||||| ||||||||||||||||||||||| Sbjct: 18272835 gttaacacagggaccatgttcactgtctactacaa 18272801 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 348 attgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 ||||||| ||| || ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 18272550 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 18272496 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgcctt 103 ||||||||||| ||||| ||| ||||| ||||||| |||||||| ||||| Sbjct: 18273109 ggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 18273060 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 agtgtctttgtcagttccaa 79 |||||||||||||||||||| Sbjct: 25569078 agtgtctttgtcagttccaa 25569059
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 183 tcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgctat 241 ||||| ||||| |||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 21120345 tcagtaatatcaagtcatagtatgcatcttggagtcctagcaactgcatcacatgctat 21120403
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20 Length = 129595 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 183 tcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgctat 241 ||||| ||||| |||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 27061 tcagtaatatcaagtcatagtatgcatcttggagtcctagcaactgcatcacatgctat 27119
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 |||||||| ||||| || || || ||||| ||||| || ||||| || |||||||||||| Sbjct: 18432175 tcttcagtgatatcaagccacagcatgcatcttggggttcttgccacagcatggcatgct 18432116 Query: 240 atcaacacaaaaaccatgttcactgtctactacaa 274 | |||||| ||||||||||||||||||||||| Sbjct: 18432115 gttaacacagggaccatgttcactgtctactacaa 18432081 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 348 attgggacgaggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 ||||||| ||| || ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 18431830 attgggatgagatttaagatgaggtttgaaggtgaagaggctccagagcaaaggt 18431776 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 54 ggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgcctt 103 ||||||||||| ||||| ||| ||||| ||||||| |||||||| ||||| Sbjct: 18432389 ggctggagtgtgtttgttagtgccaaacggcttgttgctggggatgcctt 18432340 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 agtgtctttgtcagttccaa 79 |||||||||||||||||||| Sbjct: 25887748 agtgtctttgtcagttccaa 25887729
>gb|AY300808.1| Mangifera indica auxin response factor-like protein (ARF2) mRNA, complete cds Length = 1474 Score = 67.9 bits (34), Expect = 3e-08 Identities = 154/194 (79%) Strand = Plus / Plus Query: 186 gtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgctatcaac 245 |||||||| ||||| || ||||| ||||| |||||||| |||||||||||||| || | Sbjct: 1036 gtcatatccagtcacagcatgcatcttggtgtccttgccactgcatggcatgcagtctcc 1095 Query: 246 acaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttcattata 305 || ||||||||| || || |||||||| || |||| ||||| |||| |||||| | Sbjct: 1096 actggaaccatgtttacagtttactacaagcctaggataagcccggcagaattcattgtt 1155 Query: 306 ccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgaggttcaag 365 || | ||| |||| | ||| |||||||||| || |||||| ||||| | ||| ||||| Sbjct: 1156 ccctttgatcagtacatggaatctgttaaaagcaattattcaattggaatgagattcaaa 1215 Query: 366 atgaggtttgaagg 379 ||||| |||||||| Sbjct: 1216 atgagatttgaagg 1229
>ref|NM_118530.3| Arabidopsis thaliana ARF9 (AUXIN RESPONSE FACTOR 9); transcription factor AT4G23980 (ARF9) transcript variant AT4G23980.1 mRNA, complete cds Length = 2479 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 980 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 1038 Query: 248 aaaaaccatgttcactgtctactacaaacccaggacaagcc 288 ||||| ||||||| ||| ||||| ||||| |||||||||| Sbjct: 1039 gaaaactatgttcattgtatactataaaccaaggacaagcc 1079
>ref|NM_001036629.1| Arabidopsis thaliana ARF9 (AUXIN RESPONSE FACTOR 9) AT4G23980 (ARF9) transcript variant AT4G23980.2 mRNA, complete cds Length = 2835 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 1079 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 1137 Query: 248 aaaaaccatgttcactgtctactacaaacccaggacaagcc 288 ||||| ||||||| ||| ||||| ||||| |||||||||| Sbjct: 1138 gaaaactatgttcattgtatactataaaccaaggacaagcc 1178
>gb|DQ013802.1| Phyllostachys praecox ARF1 mRNA, partial cds Length = 1108 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 51 agcggctggagtgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttc 110 |||||||||||||| ||||| ||| ||||| | ||||| |||||||| |||||||| || Sbjct: 625 agcggctggagtgtttttgttagtgccaaacgccttgttgctggggatgccttcatattt 684 Query: 111 ctcagaggagaga 123 |||||||| |||| Sbjct: 685 ctcagaggtgaga 697 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| |||||||| ||||| |||||||| ||||| || |||||||| |||||||||| Sbjct: 754 tcttcggtcatatcaagtcacagtatgcatcttggtgttcttgcaacagcatggcatgtg 813 Query: 240 atcaacacaaaaaccatgttcactgtctactacaaacccaggac 283 ||||| || |||||||||||||||||||| || ||||| Sbjct: 814 gcgaacactgggactatgttcactgtctactacaagccaaggac 857
>gb|BT015544.1| Arabidopsis thaliana At4g23980 mRNA sequence Length = 1909 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 683 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 741 Query: 248 aaaaaccatgttcactgtctactacaaacccaggacaagcc 288 ||||| ||||||| ||| ||||| ||||| |||||||||| Sbjct: 742 gaaaactatgttcattgtatactataaaccaaggacaagcc 782
>gb|AF344312.1| Arabidopsis thaliana clone C00029 (e) auxin response factor 9 (At4g23980) mRNA, complete cds Length = 1917 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 685 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 743 Query: 248 aaaaaccatgttcactgtctactacaaacccaggacaagcc 288 ||||| ||||||| ||| ||||| ||||| |||||||||| Sbjct: 744 gaaaactatgttcattgtatactataaaccaaggacaagcc 784
>emb|BX828437.1|CNS0A2BW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZD05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2473 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 980 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 1038 Query: 248 aaaaaccatgttcactgtctactacaaacccaggacaagcc 288 ||||| ||||||| ||| ||||| ||||| |||||||||| Sbjct: 1039 gaaaactatgttcattgtatactataaaccaaggacaagcc 1079
>gb|AF082176.1|AF082176 Arabidopsis thaliana auxin response factor 9 (ARF9) mRNA, complete cds Length = 2292 Score = 65.9 bits (33), Expect = 1e-07 Identities = 86/101 (85%), Gaps = 2/101 (1%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 972 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 1030 Query: 248 aaaaaccatgttcactgtctactacaaacccaggacaagcc 288 ||||| ||||||| ||| ||||| ||||| |||||||||| Sbjct: 1031 gaaaactatgttcattgtatactataaaccaaggacaagcc 1071
>gb|AY255705.1| Mangifera indica auxin response factor-like protein (ARF1) mRNA, complete cds Length = 3272 Score = 63.9 bits (32), Expect = 5e-07 Identities = 185/236 (78%) Strand = Plus / Plus Query: 186 gtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgctatcaac 245 |||||||| ||||| || ||||| ||||| |||||||| |||||||||||||| || | Sbjct: 1036 gtcatatccagtcacagcatgcatcttggtgtccttgccactgcatggcatgcagtctcc 1095 Query: 246 acaaaaaccatgttcactgtctactacaaacccaggacaagccgttcagagttcattata 305 || ||||||||| || || |||||||| || |||| ||||| |||| |||||| | Sbjct: 1096 actggaaccatgtttacagtttactacaagcctaggataagcccggcagaattcattgtt 1155 Query: 306 ccatatgacaagtatacggagtctgttaaaaacatttattctattgggacgaggttcaag 365 || | ||| |||| | ||| |||||||||| || |||||| ||||| | | | ||| | Sbjct: 1156 ccctttgatcagtacatggaatctgttaaaagcaattattcaattggaatgggattcgaa 1215 Query: 366 atgaggtttgaaggggaagaggcaccagagcaaaggtttactggtaccatagttgg 421 ||||| |||||||| || || || || ||||| |||| |||||| ||||| ||||| Sbjct: 1216 atgagatttgaaggcgaggaagctcctgagcagaggtatactggcaccattgttgg 1271
>dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G16, full insert sequence Length = 3106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 183 tcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgctat 241 ||||| ||||| |||||||||||||| |||||| |||| |||||||||| |||||||| Sbjct: 1019 tcagtaatatcaagtcatagtatgcatcttggattcctagcaactgcatcacatgctat 1077
>gb|DQ153983.1| Gossypium barbadense auxin response factor 1 (ARF1) mRNA, complete cds Length = 2734 Score = 54.0 bits (27), Expect = 5e-04 Identities = 138/175 (78%) Strand = Plus / Plus Query: 57 tggagtgtctttgtcagttccaaaaggcttgtcgctggggacgccttcattttcctcaga 116 |||||||||||||| |||||||||| ||| || ||||| || || ||||| ||||| || Sbjct: 928 tggagtgtctttgttagttccaaaaagctagtagctggagatgctttcatattcctgagg 987 Query: 117 ggagagagcggtgagcttcgtgttggtgtgaggcgggctatgagacagctttccaacata 176 || | | || || || |||||||| |||||| || ||||||||| | | || || Sbjct: 988 ggtgctaatggggatctgcgtgttggagtgaggaggcttatgagacaacaggcaaatatg 1047 Query: 177 gcttcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcat 231 ||||||| || |||||||||||||| ||||| ||||| || ||||| ||||||| Sbjct: 1048 ccttcttctgttatatctagtcatagcatgcatcttggggtgcttgccactgcat 1102
>dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTG10 Length = 81284 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 316 agtatacggagtctgttaaaaacatttattctattgggacgaggttcaagatgaggtttg 375 |||||| |||||||||||| || | || |||||||| | ||| ||||| ||||| |||| Sbjct: 15350 agtatatggagtctgttaagaataactactctattggcatgagattcaaaatgagatttg 15409 Query: 376 aaggggaagaggcaccagagcaaaggt 402 |||| |||||||| || ||||| |||| Sbjct: 15410 aaggcgaagaggctcctgagcagaggt 15436 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 180 tcttcagtcatatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgc 238 ||||| || |||||||| ||||| ||||| |||||||| || || || ||||||||||| Sbjct: 15080 tcttctgttatatctagccatagcatgcatcttggagtactggccaccgcatggcatgc 15138 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 443 gtggccagaatcaagctggagatccctcaaggt 475 ||||||| |||||| ||||||||||||||||| Sbjct: 15573 gtggccaaaatcaaagtggagatccctcaaggt 15605
>ref|NM_188673.1| Oryza sativa (japonica cultivar-group), Ozsa8276 predicted mRNA Length = 1842 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 356 gaggttcaagatgaggtttgaaggggaaga 385 ||||||||||||||| |||||||||||||| Sbjct: 870 gaggttcaagatgagttttgaaggggaaga 899
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/90 (84%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 112355 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 112413 Query: 248 aaaaaccatgttcactgtctactacaaacc 277 ||||| ||||||| ||| ||||| ||||| Sbjct: 112414 gaaaactatgttcattgtatactataaacc 112443
>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project) Length = 89826 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/90 (84%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 62449 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 62507 Query: 248 aaaaaccatgttcactgtctactacaaacc 277 ||||| ||||||| ||| ||||| ||||| Sbjct: 62508 gaaaactatgttcattgtatactataaacc 62537
>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0708G02 Length = 168976 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 356 gaggttcaagatgaggtttgaaggggaaga 385 ||||||||||||||| |||||||||||||| Sbjct: 96892 gaggttcaagatgagttttgaaggggaaga 96921
>dbj|AK102521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095P08, full insert sequence Length = 2538 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 356 gaggttcaagatgaggtttgaaggggaaga 385 ||||||||||||||| |||||||||||||| Sbjct: 935 gaggttcaagatgagttttgaaggggaaga 964
>dbj|AK064007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G08, full insert sequence Length = 2518 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 356 gaggttcaagatgaggtttgaaggggaaga 385 ||||||||||||||| |||||||||||||| Sbjct: 901 gaggttcaagatgagttttgaaggggaaga 930
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/90 (84%), Gaps = 2/90 (2%) Strand = Plus / Minus Query: 189 atatctagtcatagtatgcaccttggagtccttgcaactgcatggcatgcta-tcaacac 247 ||||| |||||||||||||| || ||||| ||||| |||||| | ||||||| |||| || Sbjct: 100256 atatcaagtcatagtatgcatctgggagtgcttgctactgcacgccatgctactcaa-ac 100198 Query: 248 aaaaaccatgttcactgtctactacaaacc 277 ||||| ||||||| ||| ||||| ||||| Sbjct: 100197 gaaaactatgttcattgtatactataaacc 100168
>dbj|AB071300.1| Oryza sativa OsARF16 mRNA for auxin response factor 16, partial cds Length = 2088 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 356 gaggttcaagatgaggtttgaaggggaaga 385 ||||||||||||||| |||||||||||||| Sbjct: 858 gaggttcaagatgagttttgaaggggaaga 887
>gb|AC140551.8| Medicago truncatula clone mth2-80i8, complete sequence Length = 135244 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 57 tggagtgtctttgtcagttccaaaa 81 ||||||||||||||||||||||||| Sbjct: 42291 tggagtgtctttgtcagttccaaaa 42267
>gb|AC148097.7| Medicago truncatula clone mth2-15a20, complete sequence Length = 125098 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 57 tggagtgtctttgtcagttccaaaa 81 ||||||||||||||||||||||||| Sbjct: 42288 tggagtgtctttgtcagttccaaaa 42264
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 358 ggttcaagatgaggtttgaaggggaagaggcaccagagcaaaggt 402 ||||||| ||||||||||| || |||||||| || |||||||||| Sbjct: 48897 ggttcaaaatgaggtttgagggtgaagaggctcctgagcaaaggt 48853 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 192 tctagtcatagtatgcaccttggagtccttgcaactgcatggcatgct 239 ||||| ||||| ||||| ||||| || ||||||||||| ||||||||| Sbjct: 49186 tctagccatagcatgcatcttggtgttcttgcaactgcctggcatgct 49139 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 57 tggagtgtctttgtcagttccaaaaggcttgtcgctgggga 97 |||||||| ||||||||||| || ||||| || |||||||| Sbjct: 49406 tggagtgtttttgtcagttctaagaggctggttgctgggga 49366
>emb|AJ716227.1| Brassica napus mRNA for putative auxin response factor (ARF2 gene) Length = 2547 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 366 atgaggtttgaaggggaagaggcaccagagcaaaggtttactgg 409 ||||| |||||||| |||||||| || ||||| ||||||||||| Sbjct: 991 atgagatttgaaggcgaagaggctcccgagcagaggtttactgg 1034 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 459 tggagatccctcaaggtgcgttgggatgag 488 ||||||||||||||||| || ||||||||| Sbjct: 1087 tggagatccctcaaggtacggtgggatgag 1116
>gb|AC125080.3| Mus musculus BAC clone RP24-68P23 from chromosome 16, complete sequence Length = 181087 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 aggtttactggtaccatagttg 420 |||||||||||||||||||||| Sbjct: 9810 aggtttactggtaccatagttg 9789
>gb|AY107195.1| Zea mays PCO096052 mRNA sequence Length = 2179 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/57 (85%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 14 attttccgcgggcaacctaggaggcatctccttcagnagcggctggagtgtctttgt 70 ||||| || |||||||| | ||||||||||||| | | |||||||||||||||||| Sbjct: 110 atttttcgagggcaacccaagaggcatctcctt-accaccggctggagtgtctttgt 165
>gb|AC108826.9| Mus musculus chromosome 16, clone RP23-109P11, complete sequence Length = 191894 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 399 aggtttactggtaccatagttg 420 |||||||||||||||||||||| Sbjct: 142888 aggtttactggtaccatagttg 142867
>ref|XM_472625.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5022 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 186 gtcatatctagtcatagtatgcaccttggagtccttgcaac 226 |||||||| || || || ||||| ||||||||||||||||| Sbjct: 700 gtcatatcaagccacagcatgcatcttggagtccttgcaac 740
>emb|AL138879.10| Human DNA sequence from clone RP11-397G17 on chromosome 6p11.2-21 Contains the 3' end of a novel gene, complete sequence Length = 164064 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 gataatcttgaccaattgtgg 446 ||||||||||||||||||||| Sbjct: 160007 gataatcttgaccaattgtgg 159987
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 186 gtcatatctagtcatagtatgcaccttggagtccttgcaac 226 |||||||| || || || ||||| ||||||||||||||||| Sbjct: 83316 gtcatatcaagccacagcatgcatcttggagtccttgcaac 83356
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 186 gtcatatctagtcatagtatgcaccttggagtccttgcaac 226 |||||||| || || || ||||| ||||||||||||||||| Sbjct: 22017394 gtcatatcaagccacagcatgcatcttggagtccttgcaac 22017434
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence Length = 99855 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 186 gtcatatctagtcatagtatgcaccttggagtccttgcaac 226 |||||||| || || || ||||| ||||||||||||||||| Sbjct: 89965 gtcatatcaagccacagcatgcatcttggagtccttgcaac 90005
>ref|XM_318849.2| Anopheles gambiae str. PEST ENSANGP00000014456 (ENSANGG00000011967), partial mRNA Length = 909 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 ggtgtgaggcgggctatgaga 161 ||||||||||||||||||||| Sbjct: 551 ggtgtgaggcgggctatgaga 571
>dbj|AK064925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N16, full insert sequence Length = 2973 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 186 gtcatatctagtcatagtatgcaccttggagtccttgcaac 226 |||||||| || || || ||||| ||||||||||||||||| Sbjct: 1107 gtcatatcaagccacagcatgcatcttggagtccttgcaac 1147
>gb|AY106140.1| Zea mays PCO128309 mRNA sequence Length = 1456 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 255 atgttcactgtctactacaaacccaggac 283 |||||||||||||||||||| || ||||| Sbjct: 41 atgttcactgtctactacaagccaaggac 69
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 atgttcactgtctactacaaa 275 ||||||||||||||||||||| Sbjct: 55983 atgttcactgtctactacaaa 56003
>ref|NM_019059.2| Homo sapiens translocase of outer mitochondrial membrane 7 homolog (yeast) (TOMM7), mRNA Length = 746 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 385 ctgttaaaaacatttattct 366
>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence Length = 218644 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atcaacacaaaaaccatgtt 259 |||||||||||||||||||| Sbjct: 45661 atcaacacaaaaaccatgtt 45642
>gb|AC107740.17| Mus musculus chromosome 9, clone RP23-340D4, complete sequence Length = 223066 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tatcaacacaaaaaccatgt 258 |||||||||||||||||||| Sbjct: 78098 tatcaacacaaaaaccatgt 78079
>gb|DQ064413.1| Influenza A virus (A/chicken/Guangdong/47/01(H9N2)) neuraminidase (NA) gene, complete cds Length = 1466 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 ccatagttggcagtgataat 431 |||||||||||||||||||| Sbjct: 1206 ccatagttggcagtgataat 1225
>gb|AC005682.2| Homo sapiens BAC clone RP11-84K19 from 7, complete sequence Length = 162139 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 154320 ctgttaaaaacatttattct 154301
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 agtgtctttgtcagttccaa 79 |||||||||||||||||||| Sbjct: 59125 agtgtctttgtcagttccaa 59106
>gb|AC132426.3| Mus musculus BAC clone RP23-312J19 from chromosome 2, complete sequence Length = 189633 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcactgtctactacaaaccc 278 |||||||||||||||||||| Sbjct: 30147 tcactgtctactacaaaccc 30166
>gb|AC122866.4| Mus musculus BAC clone RP23-145J18 from 8, complete sequence Length = 200136 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ttcttcagtcatatctagtc 198 |||||||||||||||||||| Sbjct: 130952 ttcttcagtcatatctagtc 130971
>emb|CR645292.2|CNS0EWVM Tetraodon nigroviridis full-length cDNA Length = 1068 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 378 aggttcaagatgaggtttga 397
>emb|CR734453.2|CNS0GTHG Tetraodon nigroviridis full-length cDNA Length = 1443 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 651 aggttcaagatgaggtttga 670
>emb|CR731417.2|CNS0GRB2 Tetraodon nigroviridis full-length cDNA Length = 1406 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 670 aggttcaagatgaggtttga 689
>emb|CR731393.2|CNS0GRAE Tetraodon nigroviridis full-length cDNA Length = 1409 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 670 aggttcaagatgaggtttga 689
>emb|CR730490.2|CNS0GQLB Tetraodon nigroviridis full-length cDNA Length = 1442 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 649 aggttcaagatgaggtttga 668
>emb|CR730233.2|CNS0GQE7 Tetraodon nigroviridis full-length cDNA Length = 1433 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 640 aggttcaagatgaggtttga 659
>emb|CR730190.2|CNS0GQD0 Tetraodon nigroviridis full-length cDNA Length = 1625 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 905 aggttcaagatgaggtttga 924
>emb|CR727798.2|CNS0GOIK Tetraodon nigroviridis full-length cDNA Length = 1115 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 378 aggttcaagatgaggtttga 397
>emb|CR727625.2|CNS0GODR Tetraodon nigroviridis full-length cDNA Length = 1422 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 676 aggttcaagatgaggtttga 695
>emb|CR727033.2|CNS0GNXB Tetraodon nigroviridis full-length cDNA Length = 1442 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 650 aggttcaagatgaggtttga 669
>emb|CR726978.2|CNS0GNVS Tetraodon nigroviridis full-length cDNA Length = 1585 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 882 aggttcaagatgaggtttga 901
>emb|CR726112.2|CNS0GN7Q Tetraodon nigroviridis full-length cDNA Length = 1363 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 671 aggttcaagatgaggtttga 690
>emb|CR724041.2|CNS0GLM7 Tetraodon nigroviridis full-length cDNA Length = 1646 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 912 aggttcaagatgaggtttga 931
>emb|CR724552.2|CNS0GM0E Tetraodon nigroviridis full-length cDNA Length = 1645 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 912 aggttcaagatgaggtttga 931
>gb|AC092427.2| Homo sapiens BAC clone RP11-30B1 from 7, complete sequence Length = 54396 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 atcaacacaaaaaccatgtt 259 |||||||||||||||||||| Sbjct: 30537 atcaacacaaaaaccatgtt 30556
>emb|CR656738.2|CNS0F5PK Tetraodon nigroviridis full-length cDNA Length = 1410 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 677 aggttcaagatgaggtttga 696
>emb|CR656486.2|CNS0F5IK Tetraodon nigroviridis full-length cDNA Length = 1364 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 654 aggttcaagatgaggtttga 673
>emb|CR655849.2|CNS0F50V Tetraodon nigroviridis full-length cDNA Length = 846 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 113 aggttcaagatgaggtttga 132
>emb|CR655524.2|CNS0F4RU Tetraodon nigroviridis full-length cDNA Length = 999 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 265 aggttcaagatgaggtttga 284
>emb|CR655501.2|CNS0F4R7 Tetraodon nigroviridis full-length cDNA Length = 1391 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 667 aggttcaagatgaggtttga 686
>emb|CR655375.2|CNS0F4NP Tetraodon nigroviridis full-length cDNA Length = 846 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 113 aggttcaagatgaggtttga 132
>emb|CR653572.1|CNS0F39M Tetraodon nigroviridis full-length cDNA Length = 1450 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 669 aggttcaagatgaggtttga 688
>emb|CR653180.2|CNS0F2YQ Tetraodon nigroviridis full-length cDNA Length = 1406 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 673 aggttcaagatgaggtttga 692
>emb|CR654741.2|CNS0F463 Tetraodon nigroviridis full-length cDNA Length = 747 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 18 aggttcaagatgaggtttga 37
>emb|CR654395.2|CNS0F3WH Tetraodon nigroviridis full-length cDNA Length = 1393 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 674 aggttcaagatgaggtttga 693
>emb|CR654059.2|CNS0F3N5 Tetraodon nigroviridis full-length cDNA Length = 1411 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 674 aggttcaagatgaggtttga 693
>emb|CR653278.1|CNS0F31G Tetraodon nigroviridis full-length cDNA Length = 1426 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 688 aggttcaagatgaggtttga 707
>emb|CR652691.2|CNS0F2L5 Tetraodon nigroviridis full-length cDNA Length = 1425 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 686 aggttcaagatgaggtttga 705
>emb|CR651975.2|CNS0F219 Tetraodon nigroviridis full-length cDNA Length = 1228 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 457 aggttcaagatgaggtttga 476
>emb|CR651868.2|CNS0F1YA Tetraodon nigroviridis full-length cDNA Length = 1408 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 671 aggttcaagatgaggtttga 690
>emb|CR651333.2|CNS0F1JF Tetraodon nigroviridis full-length cDNA Length = 1402 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 673 aggttcaagatgaggtttga 692
>emb|CR650480.2|CNS0F0VQ Tetraodon nigroviridis full-length cDNA Length = 1066 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 378 aggttcaagatgaggtttga 397
>emb|CR650012.2|CNS0F0IQ Tetraodon nigroviridis full-length cDNA Length = 881 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 148 aggttcaagatgaggtttga 167
>emb|CR650009.2|CNS0F0IN Tetraodon nigroviridis full-length cDNA Length = 1393 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 671 aggttcaagatgaggtttga 690
>emb|CR648795.2|CNS0EZKX Tetraodon nigroviridis full-length cDNA Length = 1095 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 303 aggttcaagatgaggtttga 322
>emb|CR648159.2|CNS0EZ39 Tetraodon nigroviridis full-length cDNA Length = 1388 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 669 aggttcaagatgaggtttga 688
>emb|CR648012.2|CNS0EYZ6 Tetraodon nigroviridis full-length cDNA Length = 1450 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 662 aggttcaagatgaggtttga 681
>emb|CR647119.2|CNS0EYAD Tetraodon nigroviridis full-length cDNA Length = 1160 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 378 aggttcaagatgaggtttga 397
>emb|CR647359.2|CNS0EYH1 Tetraodon nigroviridis full-length cDNA Length = 1111 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 377 aggttcaagatgaggtttga 396
>emb|CR647263.2|CNS0EYED Tetraodon nigroviridis full-length cDNA Length = 1374 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 667 aggttcaagatgaggtttga 686
>emb|CR645531.2|CNS0EX29 Tetraodon nigroviridis full-length cDNA Length = 1137 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 401 aggttcaagatgaggtttga 420
>emb|CR645769.1|CNS0EX8V Tetraodon nigroviridis full-length cDNA Length = 1434 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 660 aggttcaagatgaggtttga 679
>emb|CR645296.2|CNS0EWVQ Tetraodon nigroviridis full-length cDNA Length = 1408 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 671 aggttcaagatgaggtttga 690
>emb|CR643558.2|CNS0EVJG Tetraodon nigroviridis full-length cDNA Length = 1386 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 662 aggttcaagatgaggtttga 681
>emb|CR643446.2|CNS0EVGC Tetraodon nigroviridis full-length cDNA Length = 1409 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 673 aggttcaagatgaggtttga 692
>emb|CR642564.2|CNS0EURU Tetraodon nigroviridis full-length cDNA Length = 881 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 148 aggttcaagatgaggtttga 167
>emb|CR642916.1|CNS0EV1M Tetraodon nigroviridis full-length cDNA Length = 1375 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 663 aggttcaagatgaggtttga 682
>emb|CR640777.2|CNS0ETE7 Tetraodon nigroviridis full-length cDNA Length = 1099 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 376 aggttcaagatgaggtttga 395
>emb|CR640517.1|CNS0ET6Z Tetraodon nigroviridis full-length cDNA Length = 1328 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 558 aggttcaagatgaggtttga 577
>emb|CR640160.2|CNS0ESX2 Tetraodon nigroviridis full-length cDNA Length = 1071 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 378 aggttcaagatgaggtttga 397
>emb|CR637496.1|CNS0EQV2 Tetraodon nigroviridis full-length cDNA Length = 1453 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 741 aggttcaagatgaggtttga 760
>emb|CR636636.1|CNS0EQ76 Tetraodon nigroviridis full-length cDNA Length = 1382 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 668 aggttcaagatgaggtttga 687
>emb|CR634799.2|CNS0EOS5 Tetraodon nigroviridis full-length cDNA Length = 1469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcaagatgaggtttga 376 |||||||||||||||||||| Sbjct: 677 aggttcaagatgaggtttga 696
>emb|AL591625.8| Human DNA sequence from clone RP13-202B6 on chromosome Xp21.1-21.3 Contains the gene for a novel protein and a ferritin heavy polypeptide-like 17 (FTHL17) pseudogene, complete sequence Length = 142672 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ttcaagatgaggtttgaaggggaa 383 ||||||||||| |||||||||||| Sbjct: 7933 ttcaagatgagttttgaaggggaa 7956
>emb|AL358112.20| Human DNA sequence from clone RP11-311B1 on chromosome 6, complete sequence Length = 91161 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 acacaaaaaccatgttcact 263 |||||||||||||||||||| Sbjct: 54074 acacaaaaaccatgttcact 54055
>emb|AL356413.11| Human DNA sequence from clone RP11-498F10 on chromosome 13, complete sequence Length = 146278 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 tctgttaaaaacatttattc 346 |||||||||||||||||||| Sbjct: 122511 tctgttaaaaacatttattc 122492
>emb|AJ011007.1|HSA011007 Homo sapiens mRNA for 6.2 kd protein Length = 447 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 430 ctgttaaaaacatttattct 411
>dbj|AK027539.1| Homo sapiens cDNA FLJ14633 fis, clone NT2RP2000938 Length = 1831 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 1827 ctgttaaaaacatttattct 1808
>gb|AC150891.3| Medicago truncatula chromosome 2 BAC clone mth2-76a9, complete sequence Length = 142579 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 gatagagtctctccttggga 529 |||||||||||||||||||| Sbjct: 51123 gatagagtctctccttggga 51142
>emb|BX470131.7| Zebrafish DNA sequence from clone CH211-175M2 in linkage group 10, complete sequence Length = 143803 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tcaacacaaaaaccatgttc 260 |||||||||||||||||||| Sbjct: 12939 tcaacacaaaaaccatgttc 12920
>gb|U84106.1|IAU84106 Influenza A virus strain A/NWS/33HA-Tokyo/67NA neuraminidase pseudogene, partial sequence Length = 443 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 catagttggcagtgataatc 432 |||||||||||||||||||| Sbjct: 183 catagttggcagtgataatc 202
>gb|AC146149.2| Pan troglodytes BAC clone RP43-37G13 from chromosome 7, complete sequence Length = 197136 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atcaacacaaaaaccatgtt 259 |||||||||||||||||||| Sbjct: 6159 atcaacacaaaaaccatgtt 6140
>gb|AF150733.1|AF150733 Homo sapiens AD-014 protein mRNA, complete cds Length = 487 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 455 ctgttaaaaacatttattct 436
>dbj|AK026520.1| Homo sapiens cDNA: FLJ22867 fis, clone KAT02314 Length = 449 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 428 ctgttaaaaacatttattct 409
>gb|BT023965.1| Zea mays clone EL01N0409H12 mRNA sequence Length = 1813 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 204 atgcaccttggagtccttgcaactgcat 231 ||||| ||||||||||| |||||||||| Sbjct: 86 atgcatcttggagtcctagcaactgcat 113
>gb|BC071973.1| Homo sapiens translocase of outer mitochondrial membrane 7 homolog (yeast), mRNA (cDNA clone MGC:88669 IMAGE:6278846), complete cds Length = 746 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 385 ctgttaaaaacatttattct 366
>emb|CT573098.3| RP43-076G03, complete sequence Length = 175456 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ttcaagatgaggtttgaaggggaa 383 ||||||||||| |||||||||||| Sbjct: 170456 ttcaagatgagttttgaaggggaa 170479
>emb|CT573270.1| RP43-049F09, complete sequence Length = 165723 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 ttcaagatgaggtttgaaggggaa 383 ||||||||||| |||||||||||| Sbjct: 82418 ttcaagatgagttttgaaggggaa 82441
>gb|AF086336.1|HUMZD55G12 Homo sapiens full length insert cDNA clone ZD55G12 Length = 457 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 437 ctgttaaaaacatttattct 418
>gb|BC001732.1| Homo sapiens translocase of outer mitochondrial membrane 7 homolog (yeast), mRNA (cDNA clone MGC:1816 IMAGE:3355604), complete cds Length = 467 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ctgttaaaaacatttattct 347 |||||||||||||||||||| Sbjct: 431 ctgttaaaaacatttattct 412
>emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chromosome 2, complete sequence Length = 222061 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tcactgtctactacaaaccc 278 |||||||||||||||||||| Sbjct: 23694 tcactgtctactacaaaccc 23713 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,877,586 Number of Sequences: 3902068 Number of extensions: 4877586 Number of successful extensions: 90362 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 159 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 89837 Number of HSP's gapped (non-prelim): 507 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)