ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal11k11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1225 bits (618), Expect = 0.0 Identities = 634/638 (99%), Gaps = 1/638 (0%) Strand = Plus / Plus Query: 2 gctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacag 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 gctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacag 269 Query: 62 gttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagtggaaggg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagtggaaggg 329 Query: 122 tcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggcatcgtgga 181 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 tcttgctaccgatatctccgacgaccagcaggacatcaccagagggaagggcatcgtgga 389 Query: 182 ctcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 ctcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacga 449 Query: 242 gtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggcttctacat 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 gtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggcttctacat 509 Query: 302 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 569 Query: 362 caacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaaggaaaatcat 421 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 570 caacatcaagatcccactcatcttgggtatct-ggggaggcaagggtcaaggaaaatcat 628 Query: 422 tccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggag 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 tccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggag 688 Query: 482 agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 748 Query: 542 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 808 Query: 602 gtgcgggtaggatgggcggaaccacgcagtacaccgtc 639 |||||||||||||||||||||||||||||||||||||| Sbjct: 809 gtgcgggtaggatgggcggaaccacgcagtacaccgtc 846
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 1134 bits (572), Expect = 0.0 Identities = 588/592 (99%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 48 tccaaggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacacc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccaaggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacacc 60 Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 gacaagtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagaggg 120 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 180 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 240 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 300 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggcaaggg 359 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 419 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 479 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 539 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 639 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 591
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 1106 bits (558), Expect = 0.0 Identities = 619/638 (97%), Gaps = 1/638 (0%) Strand = Plus / Plus Query: 2 gctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacag 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 gctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacag 189 Query: 62 gttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagtggaaggg 121 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 190 gttcacggtcatggcagcggaaaacatcgacgagaagaggaacaccgacaagtggaaggg 249 Query: 122 tcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggcatcgtgga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 tcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggcatcgtgga 309 Query: 182 ctcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacga 241 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 310 ctccctcttccaggcgcccactggcgacggcacccacgaggccgtcctcagctcatacga 369 Query: 242 gtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggcttctacat 301 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 370 gtacgtcagccagggactcaagaagtacgacttcgacaacaccatgggaggcttctacat 429 Query: 302 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 361 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 430 cgctcctgctttcatggacaagcttgttgtccatctctccaagaacttcatgaccctgcc 489 Query: 362 caacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaaggaaaatcat 421 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 490 caacatcaagatcccactcatcttgggtatct-ggggaggcaagggtcaaggaaaatcct 548 Query: 422 tccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggag 481 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 549 tccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgatgagtgccggag 608 Query: 482 agctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgagg 541 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 609 agctggagagtggcaacgccggagagccagccaagctcatcaggcagcggtaccgtgagg 668 Query: 542 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctg 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 669 ctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgccg 728 Query: 602 gtgcgggtaggatgggcggaaccacgcagtacaccgtc 639 ||||||||||||||||||| ||||| |||||||||||| Sbjct: 729 gtgcgggtaggatgggcgggaccacacagtacaccgtc 766
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 735 bits (371), Expect = 0.0 Identities = 492/531 (92%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || Sbjct: 257 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 316 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| ||||| ||||| || ||||||||||||| |||||| |||||||||||||||||| Sbjct: 317 aagggtatcgtcgactccctgttccaggcgcccatgggcgatggcacccacgaggccgtc 376 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 377 ctcagctcctacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 436 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||| Sbjct: 437 ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 496 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 497 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggaaaggg 555 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 556 tcaggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcat 615 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 616 gatgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggca 675 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 676 gcggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaa 735 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 638 ||| || ||||| || |||||| |||||||||| ||||| ||||||||||| Sbjct: 736 cgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgt 786 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 2 gctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacag 61 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 148 gctcaagaagcaggtgacctcggcagtgaactaccatggcaagagcttcaaggccaacag 207 Query: 62 gttcacagtcatggc 76 |||||| |||||||| Sbjct: 208 gttcaccgtcatggc 222
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 718 bits (362), Expect = 0.0 Identities = 368/370 (99%) Strand = Plus / Plus Query: 2 gctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacag 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5551 gctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacag 5610 Query: 62 gttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagtggaaggg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5611 gttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagtggaaggg 5670 Query: 122 tcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggcatcgtgga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5671 tcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggcatcgtgga 5730 Query: 182 ctcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacga 241 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5731 ctcgctcttccaggcgcccacggggcacggcacccacgaggccgtcctcagctcctacga 5790 Query: 242 gtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggcttctacat 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5791 gtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggcttctacat 5850 Query: 302 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5851 cgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcc 5910 Query: 362 caacatcaag 371 |||||||||| Sbjct: 5911 caacatcaag 5920 Score = 486 bits (245), Expect = e-134 Identities = 455/523 (86%), Gaps = 4/523 (0%) Strand = Plus / Plus Query: 113 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 172 |||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||| || Sbjct: 2939 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 2998 Query: 173 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 232 |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| || Sbjct: 2999 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 3058 Query: 233 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 292 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3059 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 3118 Query: 293 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 352 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 3119 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 3178 Query: 353 gaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaag 412 ||| || |||||||||||| | || |||||| ||||||||| ||||||||||||| || | Sbjct: 3179 gacactccccaacatcaaggttcctctcatcctgggtatct-ggggaggcaagggacagg 3237 Query: 413 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 472 | || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 3238 gcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatga 3297 Query: 473 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 532 | ||||| ||||||||||| || ||| || ||||| |||||||| ||| ||||| ||| Sbjct: 3298 gcgccggtgagctggagagcggcaac---ggcgagccggccaagctgatccggcagaggt 3354 Query: 533 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 592 |||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| | Sbjct: 3355 accgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacc 3414 Query: 593 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 | ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 3415 tggacgccggcgcgggccggatgggcgggacgacgcagtacac 3457 Score = 359 bits (181), Expect = 7e-96 Identities = 181/181 (100%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 6587 Query: 639 c 639 | Sbjct: 6588 c 6588 Score = 161 bits (81), Expect = 3e-36 Identities = 88/89 (98%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 370 agatcccactcatcttgggtatctgggggaggcaagggtcaaggaaaatcattccagtgt 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 6070 agatcccactcatcttgggtatctgggg-aggcaagggtcaaggaaaatcattccagtgt 6128 Query: 430 gagcttgtgttcgccaagatgggcatcaa 458 ||||||||||||||||||||||||||||| Sbjct: 6129 gagcttgtgttcgccaagatgggcatcaa 6157
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 716 bits (361), Expect = 0.0 Identities = 489/531 (92%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || Sbjct: 247 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 306 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| ||||| ||||| | ||||||||||||| |||||| || ||||||||||||||| Sbjct: 307 aagggtatcgtcgactccttgttccaggcgcccatgggcgatggnacccacgaggccgtc 366 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 367 ctcagctcntacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 426 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||| Sbjct: 427 ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 486 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 487 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggaaaggg 545 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 546 tcaggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcat 605 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 606 gatgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggca 665 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 666 gcggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaa 725 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 638 ||| || ||||| || |||||| |||||||||| ||||| ||||||||||| Sbjct: 726 cgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgt 776 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 2 gctcaagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacag 61 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 138 gctcaagaagcaggtgacctcggcagtgaactaccatggcaagagcttcaaggccaacag 197 Query: 62 gttcacagtcatggc 76 |||||| |||||||| Sbjct: 198 gttcaccgtcatggc 212
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 618 bits (312), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 204 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 263 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 264 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 323 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 324 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 383 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 384 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 443 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 444 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatct-ggggaggcaaggg 502 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 503 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 562 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 563 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 622 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 623 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 682 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 683 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 730 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 99 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 158 Query: 66 a 66 | Sbjct: 159 a 159
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 618 bits (312), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 241 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 300 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 301 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 360 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 361 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 420 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 421 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 480 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 481 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatct-ggggaggcaaggg 539 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 540 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 599 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 600 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 659 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 660 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 719 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 720 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 767 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 136 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 195 Query: 66 a 66 | Sbjct: 196 a 196
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 618 bits (312), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 300 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 359 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 360 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 419 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 420 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 479 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 480 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatct-ggggaggcaaggg 538 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 539 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 598 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 599 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 658 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 659 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 718 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 719 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 766 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 135 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 194 Query: 66 a 66 | Sbjct: 195 a 195
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 618 bits (312), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 24 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 83 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 84 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 143 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 144 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 203 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 204 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 263 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 264 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatct-ggggaggcaaggg 322 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 323 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 382 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 383 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 442 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 443 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 502 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 503 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 550
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 618 bits (312), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 245 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 304 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 305 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 364 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 365 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 424 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 425 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 484 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 485 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatct-ggggaggcaaggg 543 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 544 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 603 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 604 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 663 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 664 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 723 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 724 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 771 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 9 aagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttca 66 ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 143 aagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttca 200
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 618 bits (312), Expect = e-174 Identities = 475/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 239 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 298 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 299 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 358 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 359 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 418 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 419 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 478 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 479 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatct-ggggaggcaaggg 537 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 538 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 597 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 598 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 657 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 658 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 717 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 718 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 765 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 134 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 193 Query: 66 a 66 | Sbjct: 194 a 194
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 611 bits (308), Expect = e-171 Identities = 474/528 (89%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 252 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 311 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 312 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 371 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 372 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 431 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 432 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 491 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 ||||||||||| |||||||||||| ||||||||| | ||||||||| ||||||||||||| Sbjct: 492 ttcatgaccctccccaacatcaaggtcccactcaccctgggtatct-ggggaggcaaggg 550 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 551 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 610 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||| Sbjct: 611 gatgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggca 670 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 671 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 730 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 731 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 778 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 147 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 206 Query: 66 a 66 | Sbjct: 207 a 207
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 599 bits (302), Expect = e-168 Identities = 473/528 (89%), Gaps = 4/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 212 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 271 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 272 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 331 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 332 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 391 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 ||||||||||||||||| ||| |||||||||||||||| || ||||| ||||||| ||| Sbjct: 392 ggaggcttctacatcgccccttctttcatggacaagctcgtcgtccacatctccaagaac 451 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 452 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatct-ggggaggcaaggg 510 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 ||| |||||||| |||||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 511 tcagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcat 570 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||||||||||||||| || ||| |||||||| |||||||| |||||||| Sbjct: 571 gatgagcgccggagagctggagagcggcaac---ggagagccggccaagctgatcaggca 627 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 628 gcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaa 687 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 688 cgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 735 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 107 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 166 Query: 66 a 66 | Sbjct: 167 a 167
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 529 bits (267), Expect = e-147 Identities = 460/523 (87%), Gaps = 1/523 (0%) Strand = Plus / Plus Query: 113 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 172 |||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| || Sbjct: 217 gtggaagggtctcgcttacgacatctccgatgaccagcaggacatcacgagggggaaagg 276 Query: 173 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 232 |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| || Sbjct: 277 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctgag 336 Query: 233 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 292 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 337 ctcctacgagtacatcagccagggcctgcgcaagtacgacttcgacaacaccatggacgg 396 Query: 293 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 352 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 397 gctgtacatcgccccggcgttcatggacaagctcatcgtccacctcgccaagaacttcat 456 Query: 353 gaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaag 412 ||| || |||||||||||| |||| |||||| ||||||||||||| ||||||||| || | Sbjct: 457 gacactccccaacatcaaggtccctctcatcctgggtatctgggg-aggcaagggacagg 515 Query: 413 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 472 | || || |||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 516 gcaagtcgttccagtgcgagctggtgttcgccaagatgggcatcaaccccatcatgatga 575 Query: 473 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 532 | ||||||||||||||||| || ||||| || ||||| |||||||| ||| ||||| ||| Sbjct: 576 gcgccggagagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggt 635 Query: 533 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 592 |||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||| | Sbjct: 636 accgcgaggctgccgacattatcaagaagggcaagatgtgctgcctcttcatcaacgacc 695 Query: 593 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 | ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 696 tggacgccggcgcggggcggatgggcgggacgacgcagtacac 738
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 486 bits (245), Expect = e-134 Identities = 455/523 (86%), Gaps = 4/523 (0%) Strand = Plus / Plus Query: 113 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 172 |||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||| || Sbjct: 370 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 429 Query: 173 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 232 |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| || Sbjct: 430 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 489 Query: 233 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 292 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 490 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 549 Query: 293 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 352 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 550 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 609 Query: 353 gaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaag 412 ||| || |||||||||||| | || |||||| ||||||||| ||||||||||||| || | Sbjct: 610 gacactccccaacatcaaggttcctctcatcctgggtatct-ggggaggcaagggacagg 668 Query: 413 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 472 | || || |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 669 gcaagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatga 728 Query: 473 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 532 | ||||| ||||||||||| || ||| || ||||| |||||||| ||| ||||| ||| Sbjct: 729 gcgccggtgagctggagagcggcaac---ggcgagccggccaagctgatccggcagaggt 785 Query: 533 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 592 |||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| | Sbjct: 786 accgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacc 845 Query: 593 ttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 | ||||| || ||||| |||||||||| || ||||||||||| Sbjct: 846 tggacgccggcgcgggccggatgggcgggacgacgcagtacac 888
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 484 bits (244), Expect = e-133 Identities = 365/404 (90%), Gaps = 1/404 (0%) Strand = Plus / Plus Query: 232 gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 291 |||||||||||||| |||||||||| || | | |||||||||||||||||||||||||| Sbjct: 327 gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgggag 386 Query: 292 gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 351 ||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||||||| Sbjct: 387 gcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaacttca 446 Query: 352 tgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaa 411 ||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||| Sbjct: 447 tgaccctccccaacatcaaggtcccactcatcctgggtatctgggg-aggcaagggtcag 505 Query: 412 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 471 |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 506 ggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgatg 565 Query: 472 agtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 531 || ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||||| Sbjct: 566 agcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcgg 625 Query: 532 taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 591 ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 626 taccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgat 685 Query: 592 cttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 || ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 686 ctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 729 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299 Query: 168 aagggcatcgtggactcgctcttccaggc 196 ||||| |||| ||||| || |||||||| Sbjct: 300 aagggtttcgtcgactcccttttccaggc 328 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 135 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 194 Query: 66 a 66 | Sbjct: 195 a 195
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 404 bits (204), Expect = e-109 Identities = 424/496 (85%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 144 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 203 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| | Sbjct: 235 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 294 Query: 204 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 263 |||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 295 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 354 Query: 264 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 323 || | |||| ||||||||| || || || ||||||||||| || |||||||||||| Sbjct: 355 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 414 Query: 324 cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 383 ||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 415 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 474 Query: 384 ttgggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgc 443 |||||||||||||| |||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 475 ttgggtatctgggg-aggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgc 533 Query: 444 caagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgg 503 ||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 534 caagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgg 593 Query: 504 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaaggg 563 |||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| Sbjct: 594 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaaggg 653 Query: 564 taagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 623 ||||||||||||||||||||||||||||| || || ||||| || |||||||||| || Sbjct: 654 gaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcac 713 Query: 624 cacgcagtacaccgtc 639 ||| |||||||||||| Sbjct: 714 cacccagtacaccgtc 729
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 404 bits (204), Expect = e-109 Identities = 424/496 (85%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 144 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 203 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| | Sbjct: 98 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 157 Query: 204 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 263 |||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 158 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 217 Query: 264 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 323 || | |||| ||||||||| || || || ||||||||||| || |||||||||||| Sbjct: 218 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 277 Query: 324 cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 383 ||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 278 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 337 Query: 384 ttgggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgc 443 |||||||||||||| |||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 338 ttgggtatctgggg-aggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgc 396 Query: 444 caagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgg 503 ||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 397 caagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgg 456 Query: 504 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaaggg 563 |||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| Sbjct: 457 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaaggg 516 Query: 564 taagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 623 ||||||||||||||||||||||||||||| || || ||||| || |||||||||| || Sbjct: 517 gaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcac 576 Query: 624 cacgcagtacaccgtc 639 ||| |||||||||||| Sbjct: 577 cacccagtacaccgtc 592
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 396 bits (200), Expect = e-107 Identities = 423/496 (85%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 144 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 203 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| | Sbjct: 128 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 187 Query: 204 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 263 |||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 188 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 247 Query: 264 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 323 || | |||| ||||||||| || || || ||||||||||| || |||||||||||| Sbjct: 248 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 307 Query: 324 cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 383 ||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 308 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 367 Query: 384 ttgggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgc 443 |||||||||||||| |||||| ||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 368 ttgggtatctgggg-aggcaaaggtcaggggaaatccttccaatgtgaacttgtgttcgc 426 Query: 444 caagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgg 503 ||||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| || Sbjct: 427 caagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgg 486 Query: 504 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaaggg 563 |||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| Sbjct: 487 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaaggg 546 Query: 564 taagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 623 ||||||||||||||||||||||||||||| || || ||||| || |||||||||| || Sbjct: 547 gaagatgtgctgcctcttcatcaacgatctcgatgccggtgccggccggatgggcggcac 606 Query: 624 cacgcagtacaccgtc 639 ||| |||||||||||| Sbjct: 607 cacccagtacaccgtc 622
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 389 bits (196), Expect = e-105 Identities = 446/528 (84%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 |||||| |||| ||| |||||||||||||| | ||| ||||||||||||| ||||| Sbjct: 273 aagggcctcgtcgacaacctcttccaggcgcctatgggggacggcacccacgtcgccgtg 332 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||| ||| |||||||||||| | ||| |||||||||||| ||| Sbjct: 333 ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 | ||||||||||| || | |||||||||||||| || ||||| |||||||| ||| Sbjct: 393 gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 |||||||||||||| ||||||||| | || |||||| ||||||||||||| |||||| || Sbjct: 453 ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatctgggg-aggcaaagg 511 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 || |||||||| ||||| || ||||| || ||||||||||||||||||| ||||||||| Sbjct: 512 ccagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcacccccatcat 571 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||| ||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 572 gatgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggca 631 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||| ||||||||||| | ||| | ||||||||||| ||||||| ||||||||||||||| Sbjct: 632 gcgctaccgtgaggcctccgacctcatcaagaagggcaagatgtcctgcctcttcatcaa 691 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||| | ||||| || |||||| | |||||||| ||||| |||||||| Sbjct: 692 cgacttggacgccggcgcgggtcgcatgggcggcaccacccagtacac 739 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 11 gcaggtgacctcggccgtgaactaccatggcaagagctcca 51 ||||||| || ||||||||| |||||||||||||||||||| Sbjct: 107 gcaggtgtccgcggccgtgacctaccatggcaagagctcca 147
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 345 bits (174), Expect = 1e-91 Identities = 438/528 (82%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 |||||| |||| ||| |||||||||||||| | |||||||||||| ||||| Sbjct: 273 aagggcctcgtcgacaacctcttccaggcgcctatnnnnnacggcacccacgtcgccgtg 332 Query: 228 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 287 |||||||||||||| ||| |||||||||||| | ||| |||||||||||| ||| Sbjct: 333 ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392 Query: 288 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 347 | ||||||||||| || | |||||||||||||| || ||||| |||||||| ||| Sbjct: 393 gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452 Query: 348 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaaggg 407 |||||||||||||| ||||||||| | || |||||| |||||||| | ||||||||| || Sbjct: 453 ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatc-gtgggaggcaaagg 511 Query: 408 tcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcat 467 || |||||||| ||||| || ||||| || ||||||||||||||||||| ||||| Sbjct: 512 ccagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcannnnnatcat 571 Query: 468 gatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggca 527 |||||| ||||| ||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct: 572 gatgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggca 631 Query: 528 gcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaa 587 ||| ||||||||||| | ||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 632 gcgctaccgtgaggcctccgacctcatcaagaagggcaagatgtgctgcctcttcatcaa 691 Query: 588 cgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||| | ||||| || |||||| | |||||||| ||||| |||||||| Sbjct: 692 cgacttggacgccggcgcgggtcgcatgggcggcaccacccagtacac 739 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 11 gcaggtgacctcggccgtgaactaccatggcaagagctcca 51 ||||||| || ||||||||| |||||||||||||||||||| Sbjct: 107 gcaggtgtccgcggccgtgacctaccatggcaagagctcca 147
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 331 bits (167), Expect = 2e-87 Identities = 300/343 (87%), Gaps = 1/343 (0%) Strand = Plus / Plus Query: 297 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 356 ||||||||||| || ||||||||||||||||| || || || |||| |||||||||| | Sbjct: 87 tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146 Query: 357 ctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaaggaaa 416 |||||||||||||||| || ||||| |||||||||||||| |||||| ||||| || || Sbjct: 147 ttgcccaacatcaagattcctctcattttgggtatctgggg-aggcaaaggtcaggggaa 205 Query: 417 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 476 ||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 206 atccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgc 265 Query: 477 cggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccg 536 ||| ||||||||||| || ||||| |||||||| || ||||| ||| ||||||||||||| Sbjct: 266 cggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccg 325 Query: 537 tgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttga 596 |||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||| || Sbjct: 326 tgaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcga 385 Query: 597 cgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 639 || ||||| || |||||||||| ||||| |||||||||||| Sbjct: 386 tgccggtgccggccggatgggcggcaccacccagtacaccgtc 428
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 321 bits (162), Expect = 2e-84 Identities = 433/522 (82%), Gaps = 1/522 (0%) Strand = Plus / Plus Query: 114 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggc 173 |||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| || Sbjct: 280 tggaagggtcttgcttatgatatctccgatgaccaacaagacattaccagagggaaaggt 339 Query: 174 atcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagc 233 || || ||||| | ||||| || |||| | ||| || || ||| | || ||| | ||| Sbjct: 340 atggtcgactcattgttccaagctcccatgaacgatggtactcactatgctgtcatgagc 399 Query: 234 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 293 ||||| |||||| | ||||| ||||| || | |||||||| ||||||| ||||| || Sbjct: 400 tcctatgagtacattagccaaggccttcgcacatacgacttggacaacaacatggatgga 459 Query: 294 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 353 |||||||| || || ||||||||||||||||||||||| || || |||| |||| |||| Sbjct: 460 ttctacattgccccagctttcatggacaagcttgttgttcacatcaccaagaactacatg 519 Query: 354 accctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaagg 413 ||||| || ||||| ||| | || || ||||||||||| ||||| |||||| |||||||| Sbjct: 520 acccttcctaacattaaggttcctcttatcttgggtatttgggg-aggcaaaggtcaagg 578 Query: 414 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 473 |||||| ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 579 aaaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgatgag 638 Query: 474 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 533 ||||||||| |||| ||||||||||| ||||| ||||||||| | |||||||| |||| Sbjct: 639 tgccggagaattggaaagtgggaacgccggagaaccagccaagttgatcaggcaaaggta 698 Query: 534 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 593 ||||||||| || ||||| |||||||| || || ||||| |||||||| ||||||||||| Sbjct: 699 ccgtgaggccgccgacattatcaagaaagggaaaatgtgttgcctctttatcaacgatct 758 Query: 594 tgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||| || ||| | ||||| |||||||| || ||||| Sbjct: 759 cgacgctggagccggtcgtatgggaggaaccacacaatacac 800
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 674 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 675 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 734 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 735 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 794 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 795 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 854 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 855 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 905
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 674 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 675 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 734 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 735 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 794 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 795 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 854 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 855 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 905
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 703 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 704 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 763 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 764 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 823 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 824 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 883 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 884 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 934
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 585 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 586 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 645 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 646 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 705 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 706 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 765 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 766 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 816
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 588 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 589 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 648 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 649 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 708 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 709 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 768 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 769 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 819
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 399 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 458 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 459 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 518 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 519 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 577 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 578 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 637 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 638 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 697 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 698 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 757 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 758 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 808
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 585 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 586 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 645 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 646 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 705 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 706 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 765 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 766 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 816
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 588 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 589 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 648 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 649 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 708 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 709 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 768 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 769 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 819
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 315 bits (159), Expect = 1e-82 Identities = 349/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 703 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 704 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 763 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 764 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 823 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||| Sbjct: 824 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcat 883 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 884 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 934
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 307 bits (155), Expect = 2e-80 Identities = 348/411 (84%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 322 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 381 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 382 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 441 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||| |||||| Sbjct: 442 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatgggg-aggcaa 500 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 501 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 560 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcag 524 |||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 561 catgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccg 620 Query: 525 gcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcat 584 ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||| |||| Sbjct: 621 tcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcat 680 Query: 585 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 681 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 731
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 301 bits (152), Expect = 1e-78 Identities = 282/324 (87%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 312 ttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 371 |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 22 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81 Query: 372 atcccactcatcttgggtatctgggggaggcaagggtcaaggaaaatcattccagtgtga 431 | || |||||| ||||||||||||| |||||| || || |||||||| ||||| || || Sbjct: 82 gttcccctcatcctgggtatctgggg-aggcaaaggccagggaaaatcgttccaatgcga 140 Query: 432 gcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagag 491 ||| || ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 141 gctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagag 200 Query: 492 tgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacat 551 || ||||| |||||||| |||||||||||||||||||| ||||||||||| | ||| | Sbjct: 201 cggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacct 260 Query: 552 gatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtag 611 ||||||||||| ||||||| |||||||||||||||||| | ||||| || |||||| | Sbjct: 261 catcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgccggcgcgggtcg 320 Query: 612 gatgggcggaaccacgcagtacac 635 |||||||| ||||| |||||||| Sbjct: 321 catgggcggcaccacccagtacac 344
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 293 bits (148), Expect = 4e-76 Identities = 311/364 (85%), Gaps = 1/364 (0%) Strand = Plus / Plus Query: 276 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 335 ||||||| ||||| || |||||||| |||||||| |||||||||||||||||||| || Sbjct: 256 gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315 Query: 336 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 395 || |||| ||||||||| |||| || ||||| ||| | || || ||||||||||| ||| Sbjct: 316 atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375 Query: 396 gggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcat 455 || |||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| || Sbjct: 376 gg-aggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtat 434 Query: 456 caaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaa 515 ||||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 435 caaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaa 494 Query: 516 gctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctg 575 | | |||||||| |||||||||| ||||| ||||| ||||| ||||| || |||||| Sbjct: 495 gttgatcaggcaaaggtaccgtgaagctgccgacataatcaaaaagggcaaaatgtgcgc 554 Query: 576 cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||| |||||||| || |||||||| ||| | ||||| |||||||| || ||||| Sbjct: 555 cctcttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacac 614 Query: 636 cgtc 639 |||| Sbjct: 615 cgtc 618
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 291 bits (147), Expect = 1e-75 Identities = 307/359 (85%), Gaps = 1/359 (0%) Strand = Plus / Plus Query: 265 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 324 ||||| |||| ||||||| ||||| || |||||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 325 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 384 |||| ||||| || |||| |||||| ||| || || ||||||||||| || || |||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 385 tgggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 444 ||||||||||||| |||||| |||||||||||||| ||||| ||||| ||||| || ||| Sbjct: 551 tgggtatctgggg-aggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcc 609 Query: 445 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 504 |||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || ||| Sbjct: 610 aagatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcagga 669 Query: 505 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 564 || || |||||||| |||||||| |||||||||| ||||| ||||| |||||||||||| Sbjct: 670 gaacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatcaagaagggt 729 Query: 565 aagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 623 || ||||||||||| |||||||||||||| |||||||| || ||| | ||||| ||||| Sbjct: 730 aaaatgtgctgcctgttcatcaacgatctcgacgctggagctggtcgtatgggtggaac 788
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 285 bits (144), Expect = 9e-74 Identities = 348/412 (84%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 225 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 284 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 391 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 450 Query: 285 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 344 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 451 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 510 Query: 345 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaa 404 |||||| |||| ||||| ||||||||| | ||||| || ||||| ||| |||||||||| Sbjct: 511 aacttcttgactctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaa 569 Query: 405 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 464 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 570 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 629 Query: 465 catgatgagtgccggagagctggagagtgggaacgctggag-agccagccaagctcatca 523 |||||||||||| |||||||| |||||||| ||||| |||| || | | |||||| ||| Sbjct: 630 catgatgagtgctggagagcttgagagtggaaacgcaggagaagtccg-caagcttatcc 688 Query: 524 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 583 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||| Sbjct: 689 gtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttca 748 Query: 584 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 749 tcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 800
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 260 bits (131), Expect = 5e-66 Identities = 273/319 (85%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 294 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 353 |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| Sbjct: 476 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 535 Query: 354 accctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaagg 413 || || |||||||| ||| | || ||||| |||||||||||||| ||| || |||||||| Sbjct: 536 actctccccaacataaaggttcctctcattttgggtatctgggg-aggtaaaggtcaagg 594 Query: 414 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 473 ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 595 taaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgag 654 Query: 474 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 533 ||||||||| ||||||| || ||||| |||||||| || ||| | |||||||| |||| Sbjct: 655 tgccggagaattggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtg 714 Query: 534 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 593 |||||||| || ||||| ||||||||||| ||||||| ||||| || ||||| ||||| Sbjct: 715 tcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatct 774 Query: 594 tgacgctggtgcgggtagg 612 ||| || ||||| |||||| Sbjct: 775 tgatgcaggtgccggtagg 793
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 256 bits (129), Expect = 8e-65 Identities = 178/193 (92%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 266 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376 Query: 326 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 385 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316 Query: 386 gggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 445 |||||||| |||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 109315 gggtatct-ggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgcca 109257 Query: 446 agatgggcatcaa 458 ||||||| ||||| Sbjct: 109256 agatggggatcaa 109244 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 109039 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 109038 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 108982 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 109706 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 109647 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 109646 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 109587 Query: 228 ctcagctcctacgagtacgtcagccaggg 256 |||||||||||||||||| |||||||||| Sbjct: 109586 ctcagctcctacgagtacctcagccaggg 109558 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 113 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 172 ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 113205 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 113146 Query: 173 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 223 | |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 113145 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 113095 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 109811 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 109752 Query: 66 a 66 | Sbjct: 109751 a 109751 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 502 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 561 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719 Query: 562 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 599 || ||||||||| || ||||||||||| || ||||| Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 421 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 458 ||||||||||| || || |||||||||||||| ||||| Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 256 bits (129), Expect = 8e-65 Identities = 178/193 (92%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 266 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253 Query: 326 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 385 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193 Query: 386 gggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 445 |||||||| |||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 31192 gggtatct-ggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgcca 31134 Query: 446 agatgggcatcaa 458 ||||||| ||||| Sbjct: 31133 agatggggatcaa 31121 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 30916 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 30915 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 30859 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 31583 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 31524 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 31523 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 31464 Query: 228 ctcagctcctacgagtacgtcagccaggg 256 |||||||||||||||||| |||||||||| Sbjct: 31463 ctcagctcctacgagtacctcagccaggg 31435 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 113 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 172 ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 35082 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 35023 Query: 173 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 223 | |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 35022 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 34972 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 31688 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 31629 Query: 66 a 66 | Sbjct: 31628 a 31628 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 502 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 561 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596 Query: 562 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 599 || ||||||||| || ||||||||||| || ||||| Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 421 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 458 ||||||||||| || || |||||||||||||| ||||| Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 256 bits (129), Expect = 8e-65 Identities = 178/193 (92%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 266 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515 Query: 326 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 385 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455 Query: 386 gggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 445 |||||||| |||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 28304454 gggtatct-ggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgcca 28304396 Query: 446 agatgggcatcaa 458 ||||||| ||||| Sbjct: 28304395 agatggggatcaa 28304383 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28304178 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 28304177 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 28304121 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 28304845 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28304786 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 28304785 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28304726 Query: 228 ctcagctcctacgagtacgtcagccaggg 256 |||||||||||||||||| |||||||||| Sbjct: 28304725 ctcagctcctacgagtacctcagccaggg 28304697 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 113 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 172 ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 28308344 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28308285 Query: 173 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 223 | |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 28308284 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28308234 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 28304950 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 28304891 Query: 66 a 66 | Sbjct: 28304890 a 28304890 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 502 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 561 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858 Query: 562 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 599 || ||||||||| || ||||||||||| || ||||| Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 421 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 458 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 256 bits (129), Expect = 8e-65 Identities = 178/193 (92%), Gaps = 1/193 (0%) Strand = Plus / Minus Query: 266 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28287023 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28286964 Query: 326 tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 385 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 28286963 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28286904 Query: 386 gggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 445 |||||||| |||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 28286903 gggtatct-ggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgcca 28286845 Query: 446 agatgggcatcaa 458 ||||||| ||||| Sbjct: 28286844 agatggggatcaa 28286832 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Minus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28286746 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28286687 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 28286686 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28286627 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| Sbjct: 28286626 cttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacac 28286570 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 108 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 167 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 28287294 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28287235 Query: 168 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 227 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 28287234 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28287175 Query: 228 ctcagctcctacgagtacgtcagccaggg 256 |||||||||||||||||| |||||||||| Sbjct: 28287174 ctcagctcctacgagtacctcagccaggg 28287146 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 113 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 172 ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 28290793 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28290734 Query: 173 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 223 | |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 28290733 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28290683 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 6 aagaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttc 65 |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 28287399 aagaagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttc 28287340 Query: 66 a 66 | Sbjct: 28287339 a 28287339 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 502 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 561 |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| ||| Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28290307 Query: 562 ggtaagatgtgctgcctcttcatcaacgatcttgacgc 599 || ||||||||| || ||||||||||| || ||||| Sbjct: 28290306 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 421 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 458 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 254 bits (128), Expect = 3e-64 Identities = 306/364 (84%), Gaps = 1/364 (0%) Strand = Plus / Plus Query: 276 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 335 ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| || Sbjct: 257 gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316 Query: 336 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 395 || ||| ||||||||| |||| || ||||| ||| | || || ||| ||||||| ||| Sbjct: 317 atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376 Query: 396 gggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcat 455 || |||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| || Sbjct: 377 gg-aggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtat 435 Query: 456 caaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaa 515 ||||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 436 caaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaa 495 Query: 516 gctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctg 575 | | |||||||| |||||||||| || || ||||| ||||| ||||| || |||||| Sbjct: 496 gttgatcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggcaaaatgtgcgc 555 Query: 576 cctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 | | ||||| || ||||| || |||||||| ||| | ||||| |||||||| || ||||| Sbjct: 556 cttgttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacac 615 Query: 636 cgtc 639 |||| Sbjct: 616 cgtc 619
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 242 bits (122), Expect = 1e-60 Identities = 324/390 (83%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 234 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 293 |||||||| ||||||||||| || || || ||||| |||| ||||||| ||| || Sbjct: 396 tcctacgaatacgtcagccaaggtcttcgccagtacaacttggacaacaagttggacgga 455 Query: 294 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 353 |||||||||||||||||||||||||||||||||||||| || || |||| |||||| || Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515 Query: 354 accctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaagg 413 | |||||||||||||| | ||||| ||||||||||||||||| |||||| |||||||| Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctgggg-aggcaaaggtcaagg 574 Query: 414 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 473 ||||||||||||||||| ||||| ||| |||||||| ||||||||||| |||||||| Sbjct: 575 caaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgag 634 Query: 474 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 533 ||| ||||| |||| ||||| || || ||||||||||||||| | || ||||| |||| Sbjct: 635 tgctggagaattggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggta 694 Query: 534 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 593 | | || || ||||| || |||| ||||| || ||||| |||||||||||||||||||| Sbjct: 695 cagagaagcagcagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatct 754 Query: 594 tgacgctggtgcgggtaggatgggcggaac 623 || || || || ||||| ||||| ||||| Sbjct: 755 cgatgcaggagctggtagaatgggtggaac 784
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 240 bits (121), Expect = 5e-60 Identities = 278/329 (84%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 265 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 324 ||||| |||| ||||||| ||||| || |||||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 325 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 384 |||| ||||| || |||| |||||| ||| || || ||||||||||| || || |||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 385 tgggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 444 ||||||||||||| |||||| |||||||||||||| ||||| ||||| ||||| || ||| Sbjct: 551 tgggtatctgggg-aggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcc 609 Query: 445 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 504 |||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || ||| Sbjct: 610 aagatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcagga 669 Query: 505 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 564 ||||| || ||||| |||||||| |||| ||||| || || || || ||||||||||| Sbjct: 670 gagcccgcaaagctgatcaggcaaaggtatcgtgaagcagctgatatcatcaagaaggga 729 Query: 565 aagatgtgctgcctcttcatcaacgatct 593 || ||||||||||| || ||||||||||| Sbjct: 730 aaaatgtgctgcctgtttatcaacgatct 758
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 230 bits (116), Expect = 4e-57 Identities = 257/300 (85%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 295 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 354 ||||||| || ||||| || ||||||||||||||||| || || |||| |||||| ||| Sbjct: 630 tctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttcttga 689 Query: 355 ccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaagga 414 | |||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||| Sbjct: 690 acttgcccaacatcaagataccactcatcttgggtgtttgggg-aggcaagggtcaaggt 748 Query: 415 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 474 ||||| ||||| ||||||||||||||||||||| | || || |||||||||||||||||| Sbjct: 749 aaatccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagt 808 Query: 475 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 534 |||||||| |||| ||||| || || ||||||||||| ||| | |||||||| ||||| Sbjct: 809 gccggagaattggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtac 868 Query: 535 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 593 |||||||| |||||| |||| |||||||||||||| ||| || |||||||||||||| Sbjct: 869 cgtgaggcagcagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatct 927
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 222 bits (112), Expect = 1e-54 Identities = 259/304 (85%), Gaps = 3/304 (0%) Strand = Plus / Plus Query: 294 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 353 |||||||| ||||||||||| |||||||||||||||| || || |||| ||||||||| Sbjct: 469 ttctacattgctcctgcttttctggacaagcttgttgttcacatcaccaagaacttcatg 528 Query: 354 accctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaagg 413 ||| |||||||||||||| | || ||||| | ||||||||||| ||||||||| ||||| Sbjct: 529 accttgcccaacatcaaggttcctctcattcttggtatctgggg-aggcaagggacaagg 587 Query: 414 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 473 ||| || ||||| ||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 588 aaagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgag 647 Query: 474 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 533 ||| |||||| |||| ||||| || || ||||||||||| || | ||||||||| | || Sbjct: 648 tgctggagagttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagata 707 Query: 534 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatc 592 |||||| |||||||| ||||| ||||| |||||||| ||| || ||||||||||||| Sbjct: 708 ccgtgaagctgcagatttgatcgccaagggaaagatgtg-tgctctattcatcaacgatc 766 Query: 593 ttga 596 |||| Sbjct: 767 ttga 770 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 114 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 172 ||||||||||| || ||||||||||| || ||||| || |||||||| || |||||||| Sbjct: 295 tggaagggtctggcctacgatatctctgatgaccaacaagacatcacaagggggaaggg 353
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 220 bits (111), Expect = 4e-54 Identities = 291/347 (83%), Gaps = 3/347 (0%) Strand = Plus / Plus Query: 293 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 352 ||||||||| || ||| |||||||||||||| ||||||| || || |||| |||| | | Sbjct: 514 cttctacattgccccttctttcatggacaagattgttgttcacatcaccaagaactactt 573 Query: 353 gaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaag 412 || | |||| ||||||||| | || || ||||||||||| ||||| |||||| ||||||| Sbjct: 574 gaacttgcctaacatcaaggttcccctgatcttgggtatttgggg-aggcaaaggtcaag 632 Query: 413 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 472 | ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 633 gtaaatccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatga 692 Query: 473 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 532 |||| ||||| |||| ||||| ||||| ||||||||||| ||| | |||||||| ||| Sbjct: 693 gtgcgggagaattggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggt 752 Query: 533 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgat 591 |||||||||| |||||||| || ||||| |||||||| ||| || |||||||||||| Sbjct: 753 accgtgaggcagcagacataattgccaagggaaagatgtg-tgctctgttcatcaacgat 811 Query: 592 cttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 638 || ||||| ||||| || | ||||| || ||||| || |||||||| Sbjct: 812 ctcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgt 858
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 206 bits (104), Expect = 7e-50 Identities = 258/308 (83%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 265 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 324 ||||| |||| ||||||| || || || |||||||| ||||| ||||| ||||||||| Sbjct: 436 agtacaactttgacaacatcaaggatggtttctacattgctccagcttttttggacaagc 495 Query: 325 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 384 ||||||| || || |||| |||||||||||| |||||||||||||| | || ||||| Sbjct: 496 ttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttcctctcattc 555 Query: 385 tgggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 444 | ||| ||||||| ||||||||| ||||||||||| ||||| ||||||||||| || ||| Sbjct: 556 ttggtgtctgggg-aggcaagggacaaggaaaatctttccaatgtgagcttgtctttgcc 614 Query: 445 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 504 |||||||| ||||||||||||||||||||||| |||||| |||| ||||| || || ||| Sbjct: 615 aagatgggaatcaaccccatcatgatgagtgctggagagttggaaagtggaaatgccgga 674 Query: 505 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 564 |||||||| || | || |||||| | |||||||| || ||||| | ||||||||||| Sbjct: 675 gagccagcaaaattgattaggcagagataccgtgaagcctcagacttaatcaagaaggga 734 Query: 565 aagatgtg 572 |||||||| Sbjct: 735 aagatgtg 742
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 200 bits (101), Expect = 4e-48 Identities = 288/349 (82%), Gaps = 1/349 (0%) Strand = Plus / Plus Query: 291 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 350 ||||||||||| || ||||||||||||||||| |||||||| || || |||| |||||| Sbjct: 434 ggcttctacattgcccctgctttcatggacaaacttgttgttcacatcaccaagaacttc 493 Query: 351 atgaccctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtca 410 |||| |||||||||||||| | ||||||||||||||| | ||||| |||||| ||||| Sbjct: 494 ttgacattgcccaacatcaaggttccactcatcttgggtgtatgggg-aggcaaaggtca 552 Query: 411 aggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgat 470 ||| ||||||||||| ||||||||||| ||| |||||||| ||||||||||| ||||| Sbjct: 553 aggtaaatcattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgat 612 Query: 471 gagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcg 530 |||||| ||||| |||| ||||| || || ||||||||||| || | || ||||| | Sbjct: 613 gagtgctggagaattggaaagtggaaatgcaggagagccagctaaattgattaggcaaag 672 Query: 531 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 590 |||| | ||||| || || || |||| ||| || || ||||| || |||||||||||||| Sbjct: 673 gtacagagaggcagctgaaatcatcaggaaaggaaacatgtgttgtctcttcatcaacga 732 Query: 591 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 639 ||| || || || || ||||| ||||| ||||| || || ||||||||| Sbjct: 733 tctcgatgcaggagctggtagaatgggtggaactacccaatacaccgtc 781
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 196 bits (99), Expect = 6e-47 Identities = 249/295 (84%), Gaps = 3/295 (1%) Strand = Plus / Plus Query: 303 gctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgccc 362 ||||| ||||| ||||||||||||||||| || || |||| |||||||||||||| || Sbjct: 485 gctcccgcttttatggacaagcttgttgttcacatcaccaagaacttcatgacccttcct 544 Query: 363 aacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaaggaaaatcatt 422 ||||| ||| | || |||||||||||||| ||||| |||||| ||||| || || || || Sbjct: 545 aacatgaaggttcctctcatcttgggtatttgggg-aggcaaaggtcagggcaagtcttt 603 Query: 423 ccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggaga 482 |||||| |||||||| || ||||||||| | |||| ||| |||||||||||||||||||| Sbjct: 604 ccagtgcgagcttgtctttgccaagatgagaatcagccctatcatgatgagtgccggaga 663 Query: 483 gctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 542 |||| ||||| ||||| ||||| || || ||||| |||||||| |||||||||| || Sbjct: 664 attggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagc 723 Query: 543 tgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttga 596 || ||||| |||| ||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 724 agccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacgatcttga 777 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 137 ctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggc 196 |||||||||||| || |||||||| ||||| ||||| | |||||||| ||||||||||| Sbjct: 319 ctccgacgaccaacaagacatcacaagaggaaagggtaaggtggactccctcttccaggc 378
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 194 bits (98), Expect = 2e-46 Identities = 273/330 (82%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 294 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 353 |||||||||||||||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 473 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttctta 532 Query: 354 accctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaagg 413 || |||||||||||||| | ||||| || |||||| | ||||| ||| || |||||||| Sbjct: 533 acgttgcccaacatcaaggttccacttattttgggtgtttgggg-aggaaaaggtcaagg 591 Query: 414 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 473 ||||||||||| ||||||||||| ||| |||||||| |||||||| || |||||||| Sbjct: 592 taaatcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgag 651 Query: 474 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 533 ||| ||||| | || ||||| || || ||||||||||| || | |||||||| |||| Sbjct: 652 tgctggagaattagaaagtggaaatgcaggagagccagctaaattgatcaggcaaaggta 711 Query: 534 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 593 | | ||||| || || || |||| |||||| || ||||| |||||||||||||||||||| Sbjct: 712 cagagaggccgcggaaatcatcaggaagggaaacatgtgttgcctcttcatcaacgatct 771 Query: 594 tgacgctggtgcgggtaggatgggcggaac 623 ||| || || || ||||| ||||| ||||| Sbjct: 772 tgatgcaggagccggtagaatgggtggaac 801
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 194 bits (98), Expect = 2e-46 Identities = 273/330 (82%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 294 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 353 ||||||||||||||| |||||||||||||||||||||| || || |||| |||||| || Sbjct: 426 ttctacatcgctccttctttcatggacaagcttgttgttcacatcaccaagaacttcttg 485 Query: 354 accctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaagg 413 | |||||||||||||| | |||||||| |||||| ||||||| |||||| |||||||| Sbjct: 486 aaattgcccaacatcaaggttccactcattttgggtgtctgggg-aggcaaaggtcaagg 544 Query: 414 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 473 ||||| ||||||||||||||||| ||| |||||||| |||||||| || |||||||| Sbjct: 545 taaatctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgag 604 Query: 474 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 533 ||||||||| |||| ||||| || || |||||||| || || | || ||||| |||| Sbjct: 605 tgccggagaattggaaagtggaaatgcaggagagcctgcaaaattgattaggcaaaggta 664 Query: 534 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 593 | | ||||| ||||| || |||| ||| || || || || |||||||||||||||||||| Sbjct: 665 cagagaggcagcagaaatcatcaggaaaggaaacatctgttgcctcttcatcaacgatct 724 Query: 594 tgacgctggtgcgggtaggatgggcggaac 623 || || || || ||||| ||||| ||||| Sbjct: 725 cgatgcaggagctggtagaatgggtggaac 754
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 184 bits (93), Expect = 2e-43 Identities = 192/221 (86%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 403 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 462 ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||| || Sbjct: 1 aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60 Query: 463 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 522 |||||||||||||||||||| | || ||||| ||||||| ||||||||| ||||||||| Sbjct: 61 atcatgatgagtgccggagaattagaaagtgg-aacgctg-agagccagctaagctcatc 118 Query: 523 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 582 || ||||| ||||||||||| || || || |||||||||||||| ||||||||| | ||| Sbjct: 119 agacagcg-taccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttc 177 Query: 583 atcaacgatcttgacgctggtgcgggtaggatgggcggaac 623 |||||||||||||| |||||||| ||||| ||||| ||||| Sbjct: 178 atcaacgatcttgatgctggtgcaggtagaatgggaggaac 218
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Minus Query: 463 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 522 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496 Query: 523 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 582 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||| Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 14436 Query: 583 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 14435 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 14383 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 297 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 356 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 14910 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 14851 Query: 357 ctgcccaacatcaag 371 ||||| ||||||||| Sbjct: 14850 ctgcctaacatcaag 14836 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 395 ggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggca 454 |||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||||| | Sbjct: 14714 ggggaggcaaaggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggta 14655 Query: 455 tcaa 458 |||| Sbjct: 14654 tcaa 14651
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 161 bits (81), Expect = 3e-36 Identities = 150/173 (86%) Strand = Plus / Plus Query: 463 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 522 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787 Query: 523 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 582 | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||| Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 2847 Query: 583 atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 ||||||||||||||||||||||||||| | ||||| || || || |||||||| Sbjct: 2848 atcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacac 2900 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 297 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 356 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 2373 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 2432 Query: 357 ctgcccaacatcaag 371 ||||| ||||||||| Sbjct: 2433 ctgcctaacatcaag 2447 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 395 ggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggca 454 |||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||||| | Sbjct: 2569 ggggaggcaaaggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggta 2628 Query: 455 tcaa 458 |||| Sbjct: 2629 tcaa 2632
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 153 bits (77), Expect = 8e-34 Identities = 228/277 (82%), Gaps = 1/277 (0%) Strand = Plus / Plus Query: 296 ctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgac 355 |||||| ||||||||||| ||||||||||||||||| || |||| ||||||||||||| Sbjct: 156 ctacattgctcctgcttttatggacaagcttgttgttcacatctcgaaaaacttcatgaa 215 Query: 356 cctgcccaacatcaagatcccactcatcttgggtatctgggggaggcaagggtcaaggaa 415 | |||| ||||||||| | || ||||| | ||||| ||||| ||||||||||||||||| Sbjct: 216 cttgcctaacatcaaggttcctctcattcttggtatttgggg-aggcaagggtcaaggaa 274 Query: 416 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 475 | || ||||| ||||||||||| || || || |||| |||||||| || |||||||||| Sbjct: 275 agtccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtg 334 Query: 476 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 535 |||| || ||||||||||| | || |||||||| || || | ||||| |||| |||| Sbjct: 335 ccggtgaactggagagtggagatgcaggagagcccgcaaaattgatcagaaagcgatacc 394 Query: 536 gtgaggctgcagacatgatcaagaagggtaagatgtg 572 |||| || || ||||| ||||||| || |||||||| Sbjct: 395 gtgaagcggccgacattgtcaagaaaggaaagatgtg 431
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 127 bits (64), Expect = 5e-26 Identities = 190/232 (81%) Strand = Plus / Plus Query: 404 agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 463 |||| ||||||||||| ||||| ||||||||| || ||||||||||| |||||||||| Sbjct: 7 agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66 Query: 464 tcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatca 523 ||||||||||||| |||||||| || ||||| || || ||||||||||| || | |||| Sbjct: 67 tcatgatgagtgctggagagcttgaaagtggaaatgcaggagagccagcaaaattgatca 126 Query: 524 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 583 | ||| | |||||||| || | ||||| |||| ||| || |||||||| || || |||| Sbjct: 127 gacagagataccgtgaagcctctgacattatcaggaaaggaaagatgtgttgtctgttca 186 Query: 584 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||| || || || || ||| | ||||| |||||||| || ||||| Sbjct: 187 tcaacgatctcgatgcaggagcaggtcgtatgggtggaaccacacaatacac 238
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 115 bits (58), Expect = 2e-22 Identities = 130/154 (84%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 |||||||||||||||||||||||| ||||||| || ||||| |||||||| || ||| | Sbjct: 467 ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 |||||||| |||| |||||||| || ||||| ||||||||||| ||||||| ||||| Sbjct: 527 gatcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcct 586 Query: 579 cttcatcaacgatcttgacgctggtgcgggtagg 612 || ||||| |||||||| || ||||| |||||| Sbjct: 587 atttatcaatgatcttgatgcaggtgccggtagg 620 Score = 81.8 bits (41), Expect = 3e-12 Identities = 72/81 (88%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 378 ctcatcttgggtatctgggggaggcaagggtcaaggaaaatcattccagtgtgagcttgt 437 ||||| |||||||||||||| ||| || |||||||| ||||| ||||||||||||||||| Sbjct: 186 ctcattttgggtatctgggg-aggtaaaggtcaaggtaaatctttccagtgtgagcttgt 244 Query: 438 gttcgccaagatgggcatcaa 458 || ||||||||||| ||||| Sbjct: 245 ctttgccaagatgggaatcaa 265 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 294 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 353 |||||||| ||||| |||||||||||||||||||| || || || |||||||||||||| Sbjct: 6 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 65 Query: 354 ac 355 || Sbjct: 66 ac 67
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 449 tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 508 ||||||||| ||||||| | ||| |||||| ||||||||| ||| ||||| || |||| Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502 Query: 509 cagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaaga 568 | |||||||||||| | ||||| ||||| |||||| | |||| | |||||||| |||| Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggcttccgacagcgtgaagaagggcaaga 1562 Query: 569 tgtgctgcctcttcatcaacgatcttgacgctggtgc 605 |||||| |||||||||||||||||| ||||||||||| Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgc 1599 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 291 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 350 |||||||||||| ||||||||||| |||| ||| | ||||| | |||| |||||| Sbjct: 1128 ggcttctacatctctcctgctttcctggataagatgaccatccatgttgccaagaacttc 1187 Query: 351 atgaccctgcccaacatcaagatcccactcatcttgggtatctgggg 397 ||| ||||||||| |||||| | || |||||| ||||||||||||| Sbjct: 1188 atggacctgcccaagatcaaggttcccctcatcctgggtatctgggg 1234
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 109 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| |||||| ||||||| |||||| Sbjct: 169 gatccgtcagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcct 228 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 229 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 285
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 117 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| |||||| ||||||| |||||| Sbjct: 177 gatccgtcagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcct 236 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 237 gttcatcaacgatctggacgccggcgcaggccgcatgggcggcaccacccagtacac 293
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 303
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 305
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 243 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 299
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 247 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 303
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 245 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 301
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 97.6 bits (49), Expect = 4e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 578 ||| | ||||| ||||||||||| || ||| ||||| ||||| ||||||| |||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248 Query: 579 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacac 635 |||||||||||||| ||||| || || || | |||||||| ||||| |||||||| Sbjct: 249 gttcatcaacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacac 305
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 95.6 bits (48), Expect = 2e-16 Identities = 116/136 (85%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 459 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 518 |||||||||||||||||||||||| |||| ||||| || || ||||||||||| ||| | Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480 Query: 519 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-c 577 |||||||| ||||||||||||| |||||| |||| |||||||||||||| ||| | Sbjct: 2481 gatcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctc 2539 Query: 578 tcttcatcaacgatct 593 | |||||||||||||| Sbjct: 2540 tattcatcaacgatct 2555 Score = 91.7 bits (46), Expect = 3e-15 Identities = 71/78 (91%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 370 agatcccactcatcttgggtatctgggggaggcaagggtcaaggaaaatcattccagtgt 429 |||| ||||||||||||||| | ||||| ||||||||||||||| ||||| ||||| ||| Sbjct: 2238 agataccactcatcttgggtgtttgggg-aggcaagggtcaaggtaaatccttccaatgt 2296 Query: 430 gagcttgtgttcgccaag 447 |||||||||||||||||| Sbjct: 2297 gagcttgtgttcgccaag 2314 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 293 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 352 ||||||||| || ||||| || ||||||||||||||||| || || |||| |||||| | Sbjct: 2067 cttctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttctt 2126 Query: 353 gaccctgcccaacatcaag 371 || | |||||||||||||| Sbjct: 2127 gaacttgcccaacatcaag 2145
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 95.6 bits (48), Expect = 2e-16 Identities = 168/208 (80%) Strand = Plus / Plus Query: 395 ggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggca 454 ||||||| || ||||||||||| || ||||||||||| ||||| || || |||||||| | Sbjct: 571 ggggaggtaaaggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaa 630 Query: 455 tcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagcca 514 ||||||| || ||||||||||| || || | || |||||||| || ||||||||||| | Sbjct: 631 tcaaccctattatgatgagtgctggggaattagaaagtgggaatgcaggagagccagcaa 690 Query: 515 agctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgct 574 | | |||||||| | ||| | ||||| || || || |||||||| || || ||||| | Sbjct: 691 aattgatcaggcaaagatacagagaggcagctgatatcatcaagaaagggaaaatgtgtt 750 Query: 575 gcctcttcatcaacgatcttgacgctgg 602 | || || |||||||||||||| ||||| Sbjct: 751 gtctatttatcaacgatcttgatgctgg 778
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Minus Query: 466 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 525 ||||||||||||||||| |||| ||||| || || |||||||| || ||| | || ||| Sbjct: 7262 atgatgagtgccggagaattggaaagtggaaatgcaggagagcctgcaaagttgattagg 7203 Query: 526 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 585 || ||||||||||||| | ||||| |||| || || ||||||||||| ||||||||| Sbjct: 7202 caaaggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttcatc 7143 Query: 586 aacgatcttgacgctggtgcgggtaggatggg 617 || |||||||| || || || ||||| ||||| Sbjct: 7142 aatgatcttgatgcaggagctggtagaatggg 7111 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 395 ggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggca 454 |||||||||| ||||||||||| ||||| || ||||||||||| || ||||||||||| | Sbjct: 7516 ggggaggcaaaggtcaaggaaagtcatttcaatgtgagcttgtatttgccaagatgggaa 7457 Query: 455 tca 457 ||| Sbjct: 7456 tca 7454
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 395 ggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggca 454 ||||||| || |||||||||||||| ||||| ||||||||| || ||||||||||||| Sbjct: 104926 ggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaagatgggca 104867 Query: 455 tcaa 458 |||| Sbjct: 104866 tcaa 104863 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 463 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 512 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 104183 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 104134 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Minus Query: 568 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 627 ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019 Query: 628 cagtacac 635 |||||||| Sbjct: 104018 cagtacac 104011
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 395 ggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggca 454 ||||||| || |||||||||||||| ||||| ||||||||| || ||||||||||||| Sbjct: 83951 ggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaagatgggca 83892 Query: 455 tcaa 458 |||| Sbjct: 83891 tcaa 83888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 276 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgt 331 ||||||||||||| || || ||||| || |||||||| ||||||||||||||||| Sbjct: 84295 gacaacaccatggatggtttttacattgcacctgcttttatggacaagcttgttgt 84240 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 463 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 512 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 83208 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 83159 Score = 40.1 bits (20), Expect = 8.7 Identities = 56/68 (82%) Strand = Plus / Minus Query: 568 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 627 ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044 Query: 628 cagtacac 635 |||||||| Sbjct: 83043 cagtacac 83036
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Plus Query: 547 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 606 ||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||||| Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883 Query: 607 ggtaggatgggcggaaccacgcagtacaccgt 638 || | ||||||| ||||| ||||||||||| Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgt 1915
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 48.1 bits (24), Expect = 0.036 Identities = 48/56 (85%) Strand = Plus / Plus Query: 568 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaac 623 ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| Sbjct: 55 atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaac 110
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Plus Query: 547 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 606 ||||| ||||||||||| ||||||| || |||||||||||||| ||||| ||||| Sbjct: 612 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671 Query: 607 ggtaggatgggcggaaccacgcagtacaccgt 638 || | ||||||| ||||| ||||||||||| Sbjct: 672 ggccgcatgggcgacaccacccagtacaccgt 703 Score = 44.1 bits (22), Expect = 0.56 Identities = 49/58 (84%) Strand = Plus / Plus Query: 340 ccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgggg 397 |||| ||||||||| ||||||||| |||||| | || ||||| ||||||||||||| Sbjct: 406 ccaagaacttcatggacctgcccaagatcaaggtgcccctcattctgggtatctgggg 463
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 139 ccgacgaccagcaggacatcacc 161 ||||||||||||||||||||||| Sbjct: 1452088 ccgacgaccagcaggacatcacc 1452066
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 actcgctcttccaggcgcccac 202 |||||||||||||||||||||| Sbjct: 2553524 actcgctcttccaggcgcccac 2553503
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 tatctgggggaggcaagggtcaagga 414 ||||||||||||||||||| |||||| Sbjct: 3989436 tatctgggggaggcaagggccaagga 3989461
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 389 tatctgggggaggcaagggtcaagga 414 ||||||||||||||||||| |||||| Sbjct: 109932 tatctgggggaggcaagggccaagga 109907
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 389 tatctgggggaggcaagggtcaagga 414 ||||||||||||||||||| |||||| Sbjct: 3989547 tatctgggggaggcaagggccaagga 3989572
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 catggcagcggagaacatcg 90 |||||||||||||||||||| Sbjct: 1379894 catggcagcggagaacatcg 1379875
>gb|AE010322.1| Methanopyrus kandleri AV19 section 21 of 157 of the complete genome Length = 10732 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 atctccgacgaccagcaggacatc 158 |||||| ||||||||||||||||| Sbjct: 8676 atctcccacgaccagcaggacatc 8653
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 gcagcggagaacatcgacga 94 |||||||||||||||||||| Sbjct: 173412 gcagcggagaacatcgacga 173393
>ref|XM_520373.1| PREDICTED: Pan troglodytes LOC464867 (LOC464867), mRNA Length = 1685 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cccacgggcgacggcacccacgag 221 ||||||||||||| |||||||||| Sbjct: 1369 cccacgggcgacgtcacccacgag 1392
>ref|NM_001003053.1| Canis familiaris androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease) (AR), mRNA Length = 3577 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gcaagagctccaaggccaac 59 |||||||||||||||||||| Sbjct: 3271 gcaagagctccaaggccaac 3290
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ccctgcccaacatcaagatc 374 |||||||||||||||||||| Sbjct: 1130357 ccctgcccaacatcaagatc 1130376
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 catggcagcggagaacatcg 90 |||||||||||||||||||| Sbjct: 1380755 catggcagcggagaacatcg 1380736
>ref|NM_017617.2| Homo sapiens Notch homolog 1, translocation-associated (Drosophila) (NOTCH1), mRNA Length = 9312 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cccacgggcgacggcacccacgag 221 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 ttccagtgtgagcttgtgtt 440 |||||||||||||||||||| Sbjct: 97287 ttccagtgtgagcttgtgtt 97268
>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence Length = 193170 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggcttctacatcgctcctgctttc 314 ||||||| |||||||||||||||| Sbjct: 147044 ggcttctgcatcgctcctgctttc 147067
>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the 3' end of the gene for activator of G-protein signalling 3 (AGS3), two novel genes, the CARD9 gene for caspase recruitment domain family member 9, the SNAPC4 gene for a 190kDa small nuclear RNA activating complex polypeptide 4, the SDCCAG3 gene for serologically defined colon cancer antigen 3, the INPP5E gene for a 72kDa inositol polyphosphate-5-phosphatase, the gene for phosphatidylinositol polyphosphate 5-phosphatase type IV (PPI5PIV), a novel gene (KIAA0310), the 3' end of the NOTCH1 gene for Notch homolog 1 translocation-associated (Drosophila) and twenty CpG islands, complete sequence Length = 188462 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 cccacgggcgacggcacccacgag 221 ||||||||||||| |||||||||| Sbjct: 166513 cccacgggcgacgtcacccacgag 166490
>emb|AL136369.7| Human DNA sequence from clone RP1-251M9 on chromosome 10 Contains three novel genes, complete sequence Length = 110952 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gggtatctgggggaggcaag 405 |||||||||||||||||||| Sbjct: 7733 gggtatctgggggaggcaag 7752
>gb|AC104422.4| Homo sapiens chromosome 18, clone RP11-260B14, complete sequence Length = 147210 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ccagagggaagggcatcgtg 179 |||||||||||||||||||| Sbjct: 35948 ccagagggaagggcatcgtg 35967
>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence Length = 141442 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 gtccatctctccaaaaactt 349 |||||||||||||||||||| Sbjct: 63248 gtccatctctccaaaaactt 63229
>gb|AF197950.1| Canis familiaris androgen receptor (AR) mRNA, complete cds Length = 3577 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gcaagagctccaaggccaac 59 |||||||||||||||||||| Sbjct: 3271 gcaagagctccaaggccaac 3290
>gb|AC100806.2| Homo sapiens chromosome 18, clone CTB-2341H11, complete sequence Length = 81641 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ccagagggaagggcatcgtg 179 |||||||||||||||||||| Sbjct: 47211 ccagagggaagggcatcgtg 47230
>gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 of 195 of the complete sequence Length = 10900 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccctgcccaacatcaagatc 374 |||||||||||||||||||| Sbjct: 7760 ccctgcccaacatcaagatc 7741
>gb|AF308602.1|AF308602 Homo sapiens NOTCH 1 (N1) mRNA, complete cds Length = 7693 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cccacgggcgacggcacccacgag 221 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726
>gb|AC019012.4|AC019012 Genomic Sequence For Arabidopsis thaliana Clone T3J11 From Chromosome V, complete sequence Length = 130299 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 caaggccaacaggttcacagtcat 73 ||||||||||||||||| |||||| Sbjct: 13824 caaggccaacaggttcagagtcat 13847
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cgatatctccgacgaccagc 150 |||||||||||||||||||| Sbjct: 4182002 cgatatctccgacgaccagc 4181983
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ccctgcccaacatcaagatc 374 |||||||||||||||||||| Sbjct: 1147720 ccctgcccaacatcaagatc 1147739
>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 (ENSANGG00000011813), partial mRNA Length = 1773 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 tcgccaagatgggcatcaac 459 |||||||||||||||||||| Sbjct: 641 tcgccaagatgggcatcaac 660
>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete sequence Length = 219072 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 ggcttctacatcgctcctgctttc 314 ||||||| |||||||||||||||| Sbjct: 141825 ggcttctgcatcgctcctgctttc 141848
>gb|AC018660.1|AC018660 Genomic Sequence For Arabidopsis thaliana Clone F11P10, Chromosome V, complete sequence Length = 105589 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 caaggccaacaggttcacagtcat 73 ||||||||||||||||| |||||| Sbjct: 27506 caaggccaacaggttcagagtcat 27483
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 ccctgcccaacatcaagatc 374 |||||||||||||||||||| Sbjct: 1144872 ccctgcccaacatcaagatc 1144891
>gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltransferase (cdsA), group 1 outer membrane protein (omp1), LpxD (lpxD), FabZ (fabZ), and LpxA (lpxA) genes, complete cds Length = 8895 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ccctgcccaacatcaagatc 374 |||||||||||||||||||| Sbjct: 8238 ccctgcccaacatcaagatc 8219
>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 tggagagtgggaacgctgga 504 |||||||||||||||||||| Sbjct: 90247 tggagagtgggaacgctgga 90228
>gb|M73980.1|HUMTAN1 Human TAN-1 mRNA (homologue of Drosophila Notch gene), 5' end Length = 7332 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cccacgggcgacggcacccacgag 221 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,068,986 Number of Sequences: 3902068 Number of extensions: 5068986 Number of successful extensions: 90665 Number of sequences better than 10.0: 118 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89983 Number of HSP's gapped (non-prelim): 602 length of query: 639 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 616 effective length of database: 17,143,297,704 effective search space: 10560271385664 effective search space used: 10560271385664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
