ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal11k05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY105027.1| Zea mays PCO081602 mRNA sequence 60 5e-06
2gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 56 9e-05
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
4dbj|AK122063.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 56 9e-05
6ref|XM_483588.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
8dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
9dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
10emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 ... 44 0.32
11gb|AC007018.7| Arabidopsis thaliana chromosome 2 clone F5G3 map ... 44 0.32
12gb|AY740087.1| Ostreococcus tauri CONSTANS-like protein gene, co... 44 0.32
13gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.3
14ref|XM_473485.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
15ref|XM_387331.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 1.3
16emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chr... 42 1.3
17emb|AL035701.13|HS8B1 Human DNA sequence from clone RP1-8B1 on c... 42 1.3
18emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
19dbj|D50659.1| Homo sapiens ACTGP9 pseudogene, gamma-actin mRNA-c... 42 1.3
20gb|AC012492.9| Homo sapiens BAC clone RP11-224B10 from 2, comple... 42 1.3
21ref|NG_001069.1| Homo sapiens actin, gamma pseudogene 9 (ACTGP9)... 42 1.3
22gb|AF350318.1| Amaranthus tricolor copia-like retrotransposon C1... 42 1.3
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
24gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.1
25ref|XM_705513.1| Candida albicans SC5314 putative U3 snoRNP prot... 40 5.1
26ref|XM_705499.1| Candida albicans SC5314 putative U3 snoRNP prot... 40 5.1
27emb|AL772143.31| Zebrafish DNA sequence from clone CH211-158B22 ... 40 5.1
28emb|CR658347.2|CNS0F6Y9 Tetraodon nigroviridis full-length cDNA 40 5.1
29ref|XM_661129.1| Cryptosporidium hominis TU502 hypothetical prot... 40 5.1
30emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 5.1
31emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
32emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 5.1
33emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 5.1
34gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, com... 40 5.1
35gb|AE005919.1| Caulobacter crescentus CB15 section 245 of 359 of... 40 5.1
36gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
37gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
38dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
39gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, r... 40 5.1
40gb|AC084537.1|CBRG26I17 Caenorhabditis briggsae cosmid G26I17, c... 40 5.1
41gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102... 40 5.1
42dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.1
43emb|AL162507.1|ATT12C14 Arabidopsis thaliana DNA chromosome 3, B... 40 5.1
44gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37... 40 5.1
45gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.1
46emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.1
47gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
48emb|AL954371.6| Zebrafish DNA sequence from clone CH211-207O15, ... 40 5.1
49gb|AC145948.5| Gallus gallus BAC clone CH261-24O17 from chromoso... 40 5.1

>gb|AY105027.1| Zea mays PCO081602 mRNA sequence
          Length = 1570

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 301 gatgatgatgatgcacaagtggatggtccatctgaagatggagcag 346
           ||||||||||| |||||||  |||||||||||| ||||||||||||
Sbjct: 372 gatgatgatgaagcacaagctgatggtccatctcaagatggagcag 417



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 182 caaccaaggagatgggggcattgcatgttgggcaaa 217
           |||||||||||||||  ||| |||||||||| ||||
Sbjct: 241 caaccaaggagatggatgcactgcatgttggacaaa 276



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>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone
             OSJNBb0003F09, complete sequence
          Length = 159600

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 51/58 (87%), Gaps = 3/58 (5%)
 Strand = Plus / Plus

                                                                       
Query: 289   tcaccaccagcagatgatgatgat---gcacaagtggatggtccatctgaagatggag 343
             |||||||||| |||||||||||||   || |||| ||||||||||||| |||||||||
Sbjct: 65753 tcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggag 65810



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 51/58 (87%), Gaps = 3/58 (5%)
 Strand = Plus / Plus

                                                                          
Query: 289      tcaccaccagcagatgatgatgat---gcacaagtggatggtccatctgaagatggag 343
                |||||||||| |||||||||||||   || |||| ||||||||||||| |||||||||
Sbjct: 26940786 tcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggag 26940843



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>dbj|AK122063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115K11, full
           insert sequence
          Length = 1791

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 51/58 (87%), Gaps = 3/58 (5%)
 Strand = Plus / Plus

                                                                     
Query: 289 tcaccaccagcagatgatgatgat---gcacaagtggatggtccatctgaagatggag 343
           |||||||||| |||||||||||||   || |||| ||||||||||||| |||||||||
Sbjct: 322 tcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggag 379



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 51/58 (87%), Gaps = 3/58 (5%)
 Strand = Plus / Plus

                                                                          
Query: 289      tcaccaccagcagatgatgatgat---gcacaagtggatggtccatctgaagatggag 343
                |||||||||| |||||||||||||   || |||| ||||||||||||| |||||||||
Sbjct: 26868956 tcaccaccagaagatgatgatgatgaagcgcaaggggatggtccatctcaagatggag 26869013



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>ref|XM_483588.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1389

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                       
Query: 276 aggagctcagtcgtcaccaccagcagatgatgatgatgcacaagtggatggtccatctga 335
           |||||||| ||  |||||||||| | |||||||||||||| |||||||   ||| ||| |
Sbjct: 138 aggagctccgtactcaccaccagaaaatgatgatgatgcagaagtggactatccgtctca 197

                     
Query: 336 agatggagca 345
           ||||||||||
Sbjct: 198 agatggagca 207



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 276      aggagctcagtcgtcaccaccagcagatgatgatgatgcacaagtggatggtccatctga 335
                |||||||| ||  |||||||||| | |||||||||||||| |||||||   ||| ||| |
Sbjct: 27119283 aggagctccgtactcaccaccagaaaatgatgatgatgcagaagtggactatccgtctca 27119224

                          
Query: 336      agatggagca 345
                ||||||||||
Sbjct: 27119223 agatggagca 27119214



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>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1521_G02
          Length = 117964

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 276   aggagctcagtcgtcaccaccagcagatgatgatgatgcacaagtggatggtccatctga 335
             |||||||| ||  |||||||||| | |||||||||||||| |||||||   ||| ||| |
Sbjct: 20316 aggagctccgtactcaccaccagaaaatgatgatgatgcagaagtggactatccgtctca 20257

                       
Query: 336   agatggagca 345
             ||||||||||
Sbjct: 20256 agatggagca 20247



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>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 276   aggagctcagtcgtcaccaccagcagatgatgatgatgcacaagtggatggtccatctga 335
             |||||||| ||  |||||||||| | |||||||||||||| |||||||   ||| ||| |
Sbjct: 90370 aggagctccgtactcaccaccagaaaatgatgatgatgcagaagtggactatccgtctca 90311

                       
Query: 336   agatggagca 345
             ||||||||||
Sbjct: 90310 agatggagca 90301



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>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3,
             complete sequence
          Length = 194437

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 226   acaaacgatattctgaaaaatg 247
             ||||||||||||||||||||||
Sbjct: 33430 acaaacgatattctgaaaaatg 33451



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>gb|AC007018.7| Arabidopsis thaliana chromosome 2 clone F5G3 map RNS1, complete
            sequence
          Length = 124326

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 292  ccaccagcagatgatgatgatg 313
            ||||||||||||||||||||||
Sbjct: 3147 ccaccagcagatgatgatgatg 3126



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>gb|AY740087.1| Ostreococcus tauri CONSTANS-like protein gene, complete cds
          Length = 1475

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  ccgacggccgccgcgcgcgccg 104
           ||||||||||||||||||||||
Sbjct: 40  ccgacggccgccgcgcgcgccg 61



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 82      gccgacggccgccgcgcgcgc 102
               |||||||||||||||||||||
Sbjct: 3173612 gccgacggccgccgcgcgcgc 3173632



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>ref|XM_473485.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1554

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 89  gccgccgcgcgcgccgaaggt 109
           |||||||||||||||||||||
Sbjct: 418 gccgccgcgcgcgccgaaggt 438



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>ref|XM_387331.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07155.1)
            partial mRNA
          Length = 2034

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 195  gggggcattgcatgttgggca 215
            |||||||||||||||||||||
Sbjct: 1239 gggggcattgcatgttgggca 1219



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>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3'
              end of the PEX14 gene for peroxisomal biogenesis factor 14,
              the 3' end of the gene for a novel protein (FLJ34970,
              FLJ20321, FLJ12223) and two CpG islands, complete sequence
          Length = 143285

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 83     ccgacggccgccgcgcgcgcc 103
              |||||||||||||||||||||
Sbjct: 103531 ccgacggccgccgcgcgcgcc 103551



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>emb|AL035701.13|HS8B1 Human DNA sequence from clone RP1-8B1 on chromosome 6p11.2-21.1
            Contains the ENPP5 gene for ectonucleotide
            pyrophosphatase/phosphodiesterase 5 (putative function),
            the  ENPP4 gene for ectonucleotide
            pyrophosphatase/phosphodiesterase 4 (putative function)
            (NPP4, KIAA0879) and a novel gene, complete sequence
          Length = 126956

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 280  gctcagtcgtcaccaccagca 300
            |||||||||||||||||||||
Sbjct: 4391 gctcagtcgtcaccaccagca 4371



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>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
             complete sequence
          Length = 147806

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    gccgccgcgcgcgccgaaggt 109
             |||||||||||||||||||||
Sbjct: 54684 gccgccgcgcgcgccgaaggt 54664



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>dbj|D50659.1| Homo sapiens ACTGP9 pseudogene, gamma-actin mRNA-corresponding
           region
          Length = 2659

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 280 gctcagtcgtcaccaccagca 300
           |||||||||||||||||||||
Sbjct: 184 gctcagtcgtcaccaccagca 204



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>gb|AC012492.9| Homo sapiens BAC clone RP11-224B10 from 2, complete sequence
          Length = 183584

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   ataaaagcttttgagatttat 141
             |||||||||||||||||||||
Sbjct: 64999 ataaaagcttttgagatttat 65019



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>ref|NG_001069.1| Homo sapiens actin, gamma pseudogene 9 (ACTGP9) on chromosome 6
          Length = 2659

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 280 gctcagtcgtcaccaccagca 300
           |||||||||||||||||||||
Sbjct: 184 gctcagtcgtcaccaccagca 204



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>gb|AF350318.1| Amaranthus tricolor copia-like retrotransposon C10, partial
           sequence
          Length = 1284

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 305 atgatgatgcacaagtggatg 325
           |||||||||||||||||||||
Sbjct: 907 atgatgatgcacaagtggatg 927



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 89       gccgccgcgcgcgccgaaggt 109
                |||||||||||||||||||||
Sbjct: 28047458 gccgccgcgcgcgccgaaggt 28047438



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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 87      cggccgccgcgcgcgccgaa 106
               ||||||||||||||||||||
Sbjct: 3126092 cggccgccgcgcgcgccgaa 3126111



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>ref|XM_705513.1| Candida albicans SC5314 putative U3 snoRNP protein Utp30
           (CaO19.154), mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 caccaccagcagatgatgatgatg 313
           |||||||| |||||||||||||||
Sbjct: 110 caccaccaccagatgatgatgatg 133



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>ref|XM_705499.1| Candida albicans SC5314 putative U3 snoRNP protein Utp30
           (CaO19.7793), mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 290 caccaccagcagatgatgatgatg 313
           |||||||| |||||||||||||||
Sbjct: 110 caccaccaccagatgatgatgatg 133



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>emb|AL772143.31| Zebrafish DNA sequence from clone CH211-158B22 in linkage group 20,
             complete sequence
          Length = 73696

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   cagcagatgatgatgatgca 315
             ||||||||||||||||||||
Sbjct: 58816 cagcagatgatgatgatgca 58835



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>emb|CR658347.2|CNS0F6Y9 Tetraodon nigroviridis full-length cDNA
          Length = 810

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 79  gctgccgacggccgccgcgcgcgc 102
           ||||||| ||||||||||||||||
Sbjct: 471 gctgccgccggccgccgcgcgcgc 448



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>ref|XM_661129.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20231)
            partial mRNA
          Length = 4281

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  tgggcaaaccaaggaaacaa 229
            ||||||||||||||||||||
Sbjct: 1512 tgggcaaaccaaggaaacaa 1531



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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 186     caaggagatgggggcattgcatgt 209
               |||||||||||||||||| |||||
Sbjct: 1857214 caaggagatgggggcatttcatgt 1857237



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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     cgacggccgccgcgcgcgcc 103
              ||||||||||||||||||||
Sbjct: 200417 cgacggccgccgcgcgcgcc 200398



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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     cgacggccgccgcgcgcgcc 103
              ||||||||||||||||||||
Sbjct: 112444 cgacggccgccgcgcgcgcc 112425



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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    cgacggccgccgcgcgcgcc 103
             ||||||||||||||||||||
Sbjct: 33791 cgacggccgccgcgcgcgcc 33772



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>gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, complete sequence
          Length = 177962

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 174    ggatgcagcaaccaaggagatggg 197
              |||||| |||||||||||||||||
Sbjct: 151488 ggatgctgcaaccaaggagatggg 151511



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>gb|AE005919.1| Caulobacter crescentus CB15 section 245 of 359 of the complete genome
          Length = 12011

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    gccgacggccgccgcgcgcg 101
             ||||||||||||||||||||
Sbjct: 11061 gccgacggccgccgcgcgcg 11042



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>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0034B05, complete sequence
          Length = 125655

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 67    ccctgtgaccccgctgccgacggc 90
             ||||||||||||||| ||||||||
Sbjct: 33752 ccctgtgaccccgctcccgacggc 33775



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>gb|AC097446.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0034B05,
              complete sequence
          Length = 175061

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 67     ccctgtgaccccgctgccgacggc 90
              ||||||||||||||| ||||||||
Sbjct: 148813 ccctgtgaccccgctcccgacggc 148836



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 67      ccctgtgaccccgctgccgacggc 90
               ||||||||||||||| ||||||||
Sbjct: 3376968 ccctgtgaccccgctcccgacggc 3376991



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>gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, region 51B-51C, BAC clone
              BACR03K23, complete sequence
          Length = 160346

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 290    caccaccagcagatgatgatgatg 313
              |||||||||||||||| |||||||
Sbjct: 145815 caccaccagcagatgaggatgatg 145792



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>gb|AC084537.1|CBRG26I17 Caenorhabditis briggsae cosmid G26I17, complete sequence
          Length = 19144

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   cagcagatgatgatgatgca 315
             ||||||||||||||||||||
Sbjct: 11069 cagcagatgatgatgatgca 11050



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>gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102F19, complete sequence
          Length = 143619

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 174   ggatgcagcaaccaaggagatggg 197
             |||||| |||||||||||||||||
Sbjct: 23786 ggatgctgcaaccaaggagatggg 23809



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     cgacggccgccgcgcgcgcc 103
              ||||||||||||||||||||
Sbjct: 170993 cgacggccgccgcgcgcgcc 170974



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>emb|AL162507.1|ATT12C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T12C14
          Length = 77720

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   aaaagcttttgagatttatt 142
             ||||||||||||||||||||
Sbjct: 14273 aaaagcttttgagatttatt 14292



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>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete
              sequence
          Length = 266851

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 290    caccaccagcagatgatgatgatg 313
              |||||||||||||||| |||||||
Sbjct: 238158 caccaccagcagatgaggatgatg 238135



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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      cgacggccgccgcgcgcgcc 103
               ||||||||||||||||||||
Sbjct: 2540357 cgacggccgccgcgcgcgcc 2540338



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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 77      ccgctgccgacggccgccgcgcgc 100
               |||||||||||||| |||||||||
Sbjct: 1531118 ccgctgccgacggcggccgcgcgc 1531095



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 67      ccctgtgaccccgctgccgacggc 90
               ||||||||||||||| ||||||||
Sbjct: 3376889 ccctgtgaccccgctcccgacggc 3376912



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>emb|AL954371.6| Zebrafish DNA sequence from clone CH211-207O15, complete sequence
          Length = 124954

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   aaaaatgcgtcagatagcaa 260
             ||||||||||||||||||||
Sbjct: 77634 aaaaatgcgtcagatagcaa 77653



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>gb|AC145948.5| Gallus gallus BAC clone CH261-24O17 from chromosome unknown, complete
             sequence
          Length = 242530

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    gacggccgccgcgcgcgccg 104
             ||||||||||||||||||||
Sbjct: 74724 gacggccgccgcgcgcgccg 74705


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,708,802
Number of Sequences: 3902068
Number of extensions: 3708802
Number of successful extensions: 87472
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86554
Number of HSP's gapped (non-prelim): 918
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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