ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal11i18 |
|---|---|
| Clone Library Name | barley_pub |
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 293 bits (751), Expect = 2e-79 Identities = 141/199 (70%), Positives = 164/199 (82%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P V A S+ ++ Q+R+ ++TV+G ++P PI F EA FPDY +Q + GF +PTPI Sbjct: 94 EHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPI 153 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q QGWPMAL GRD+IGIA TGSGKTLSY LP +VH+ AQP+L+ GDGPIVL+LAPTRELA Sbjct: 154 QCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELA 213 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQ E +KFG SR R+TC+YGGAPKGPQIRDL RGVEI IATPGRLIDMLEAG TNL+ Sbjct: 214 VQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLK 273 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 274 RVTYLVLDEADRMLDMGFE 292
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 291 bits (746), Expect = 8e-79 Identities = 142/199 (71%), Positives = 163/199 (81%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P V A S+ EV ++R+ ++TV+GR+VP+P+ F EA FP Y + + GF +PT I Sbjct: 107 EHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAI 166 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q+QGWPMAL GRDV+GIAETGSGKTLSY LP +VH+ AQP L GDGPIVLILAPTRELA Sbjct: 167 QSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLILAPTRELA 226 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQAE +KFG SR R+TC+YGG PKGPQIRDL RGVE+ IATPGRLIDMLEAG TNLR Sbjct: 227 VQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLR 286 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 287 RVTYLVLDEADRMLDMGFE 305
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 291 bits (746), Expect = 8e-79 Identities = 142/199 (71%), Positives = 161/199 (80%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P V A SE EV ++R+ ++TV+GR VP+P+ F EA FP Y + + GF PT I Sbjct: 88 EHPDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAI 147 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q+QGWPMAL GRDV+GIAETGSGKTL+Y LP +VH+ AQP L GDGPIVLILAPTRELA Sbjct: 148 QSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELA 207 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQAE +KFG SR R+TC+YGG PKGPQIRDL RGVE+ IATPGRLIDMLEAG TNLR Sbjct: 208 VQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLR 267 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 268 RVTYLVLDEADRMLDMGFE 286
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 287 bits (734), Expect = 2e-77 Identities = 138/199 (69%), Positives = 162/199 (81%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P V MSE+EV ++R+ ++T+ G +VPKPIR F EA FP Y + + + GF +PT I Sbjct: 80 EHPDVAQMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEGFAKPTGI 139 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q QGWPMAL GRD+IG+A TGSGKTLSY LPG+VH+ AQP L GDGPIVL+LAPTRELA Sbjct: 140 QCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELA 199 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQ E +KFG+ SR R+TC+YGG PK QIRDL+RGVEI+IATPGRLIDMLE G TNL+ Sbjct: 200 VQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLK 259 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 260 RVTYLVLDEADRMLDMGFE 278
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 285 bits (729), Expect = 7e-77 Identities = 137/199 (68%), Positives = 160/199 (80%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P V S+ +V ++R+ +++V+G+ +P+P+ F EA FP Y + + GF PT I Sbjct: 97 EHPDVANRSQRDVDEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQGFERPTAI 156 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q+QGWPMAL GRDV+GIAETGSGKTLSY LP +VH+ AQP L GDGPIVL+LAPTRELA Sbjct: 157 QSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELA 216 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQAE TKFG SR R+TC+YGG PKGPQIRDL RGVE+ IATPGRLIDMLEAG TNLR Sbjct: 217 VQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLR 276 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 277 RVTYLVLDEADRMLDMGFE 295
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 282 bits (722), Expect = 5e-76 Identities = 137/200 (68%), Positives = 161/200 (80%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTP 193 VE V+ S+ EVAQ+R+ ++T+ G ++PKPI F EA FPDY ++ + GF +PT Sbjct: 76 VEHEVVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTS 135 Query: 194 IQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTREL 373 IQ QGWPMAL GRD++GIA TGSGKTLSY LPG+VH+ AQP L GDGPIVL+LAPTREL Sbjct: 136 IQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTREL 195 Query: 374 AVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL 553 AVQIQ E +KFG SR R+TC+YGG P+G QIR+L RG EIVIATPGRLIDMLEAG TNL Sbjct: 196 AVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTNL 255 Query: 554 RRVTYLVLDEADRMLDMGFE 613 +RVTYLVLDEADRMLDMGFE Sbjct: 256 KRVTYLVLDEADRMLDMGFE 275
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 282 bits (722), Expect = 5e-76 Identities = 137/200 (68%), Positives = 161/200 (80%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTP 193 VE VQ MS EV Q+R+ ++ + G +VPKPIR F EA FP+Y ++ + + GF +PT Sbjct: 80 VEHEDVQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEEGFEKPTA 139 Query: 194 IQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTREL 373 IQ QGWPMAL GRD+IG+A TGSGKTLSY LPG+VH+ AQP L GDGP+VL+LAPTREL Sbjct: 140 IQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDGPVVLVLAPTREL 199 Query: 374 AVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL 553 AVQIQ E +KFG SR R+TC+YGG PK QIRDL+RGVEI+IATPGRLIDMLE G TNL Sbjct: 200 AVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNL 259 Query: 554 RRVTYLVLDEADRMLDMGFE 613 +RVTYLVLDEADRMLDMGFE Sbjct: 260 KRVTYLVLDEADRMLDMGFE 279
>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 536 Score = 281 bits (719), Expect = 1e-75 Identities = 138/199 (69%), Positives = 158/199 (79%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P V A S +V +R+ D+ +G ++PKPI F EA FPDY ++ + + GF +PT I Sbjct: 72 EHPDVTARSVQDVNAFRKEHDMKCDGTDIPKPITSFDEAGFPDYVLKEVKQQGFPKPTSI 131 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q QGWPMAL GRD++GIA TGSGKTLSY LP +VH+ AQP L GDGPIVL+LAPTRELA Sbjct: 132 QCQGWPMALSGRDMVGIASTGSGKTLSYCLPSIVHINAQPLLSPGDGPIVLVLAPTRELA 191 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQ E +KFGS SR R+TC+YGGAPKG QIRDL RGVEI IATPGRLIDMLE G TNLR Sbjct: 192 VQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLR 251 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 252 RVTYLVLDEADRMLDMGFE 270
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 281 bits (719), Expect = 1e-75 Identities = 137/199 (68%), Positives = 155/199 (77%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P V+ S+ +V +R+ +T+ G VPKP+ F EA FP Y M + GF PT I Sbjct: 101 EHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAI 160 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q+QGWPMAL GRDV+GIAETGSGKTL+Y LP +VH+ AQP L GDGPIVL+LAPTRELA Sbjct: 161 QSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELA 220 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQ E KFG SR R+TC+YGG PKGPQIRDL RGVE+ IATPGRLIDMLEAG TNLR Sbjct: 221 VQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLR 280 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 281 RVTYLVLDEADRMLDMGFE 299
>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box| protein 2) (p68-like protein) Length = 546 Score = 281 bits (719), Expect = 1e-75 Identities = 136/200 (68%), Positives = 160/200 (80%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTP 193 VE +V+ S++E+AQ+R+ ++T+ G ++PKPI F EA FPDY + + GF +PT Sbjct: 79 VEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTG 138 Query: 194 IQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTREL 373 IQ QGWPMAL GRD++GIA TGSGKTLSY LPG+VH+ AQP L GDGPIVL+LAPTREL Sbjct: 139 IQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAPTREL 198 Query: 374 AVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL 553 AVQIQ E +KFG SR R+TC+YGG PK QIRDL RG EIVIATPGRLIDMLE G TNL Sbjct: 199 AVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNL 258 Query: 554 RRVTYLVLDEADRMLDMGFE 613 +RVTYLVLDEADRMLDMGFE Sbjct: 259 KRVTYLVLDEADRMLDMGFE 278
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 280 bits (717), Expect = 2e-75 Identities = 136/200 (68%), Positives = 159/200 (79%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTP 193 V+ P V A S+ EV +R +++ ++G+ VP+PI F EA FPDY M I + GF P+ Sbjct: 76 VQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSS 135 Query: 194 IQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTREL 373 IQ Q WPMAL GRD++ IAETGSGKT+S+ LP +VH+ AQP L GDGPIVLILAPTREL Sbjct: 136 IQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTREL 195 Query: 374 AVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL 553 AVQIQ EATKFG SR R+T IYGGAPKGPQIRDL+RGVEI +ATPGRLIDMLE G TNL Sbjct: 196 AVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNL 255 Query: 554 RRVTYLVLDEADRMLDMGFE 613 +RVTYLV+DEADRMLDMGFE Sbjct: 256 KRVTYLVMDEADRMLDMGFE 275
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 279 bits (713), Expect = 5e-75 Identities = 139/199 (69%), Positives = 154/199 (77%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P+V S EV ++R I V G VPKP+ F EA FP Y M + GF PT I Sbjct: 99 EHPSVANRSPAEVDKFRADHSIAVFGNNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAI 158 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q+QGWPMAL GRDV+GIAETGSGKTL+Y LP +VH+ AQP L GDGPIVLILAPTRELA Sbjct: 159 QSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELA 218 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQ E +KFG SR R+TC+YGG PKGPQIRDL RGVE+ IATPGRLIDMLE+G TNLR Sbjct: 219 VQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLR 278 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 279 RVTYLVLDEADRMLDMGFE 297
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 276 bits (707), Expect = 3e-74 Identities = 134/199 (67%), Positives = 157/199 (78%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E PAV ++ EV +R+ +T+ G +PKP+ F EA FP Y ++ + + GF +PT I Sbjct: 83 EDPAVTERTDEEVTAFRKENQMTLHGDGIPKPVTNFDEAGFPPYVLKEVKQQGFEKPTAI 142 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 Q QGWPMAL GRDVIGIA TGSGKTLSY LP +VH+ AQP L GDGPIVL+LAPTRELA Sbjct: 143 QCQGWPMALTGRDVIGIASTGSGKTLSYCLPAIVHINAQPMLSHGDGPIVLVLAPTRELA 202 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQIQ E +KFG S+ R+TC+YGG P+G QIRDL RGVEIVIATPGRL+DMLE+G TNLR Sbjct: 203 VQIQQECSKFGKSSKIRNTCVYGGVPRGQQIRDLARGVEIVIATPGRLLDMLESGKTNLR 262 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 263 RVTYLVLDEADRMLDMGFE 281
>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like| protein) Length = 550 Score = 275 bits (703), Expect = 8e-74 Identities = 131/195 (67%), Positives = 156/195 (80%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 V+ S+ EV +YR+ ++I V G VPKP+ F EA FP+Y ++ + + GF PTPIQ Q Sbjct: 93 VRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQA 152 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQ 388 WPMA+ GRD++GI+ TGSGKTLSY LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ Sbjct: 153 WPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQ 212 Query: 389 AEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTY 568 E TKFG SR R+TC+YGG P+GPQIRDL RGVEI IATPGRL+DML++ TNLRRVTY Sbjct: 213 QECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTY 272 Query: 569 LVLDEADRMLDMGFE 613 LVLDEADRMLDMGFE Sbjct: 273 LVLDEADRMLDMGFE 287
>DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 273 bits (698), Expect = 3e-73 Identities = 131/200 (65%), Positives = 156/200 (78%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTP 193 VE P V S++EV QYR + +T++G+ VPKP+ F EA FPDY + I K GF EP+ Sbjct: 96 VEDPRVSNRSDSEVQQYRASKQMTIQGQNVPKPVTSFDEAGFPDYILSEIKKMGFSEPSA 155 Query: 194 IQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTREL 373 IQ+Q WPMAL GRD++ IAETGSGKT+ + LP +VH+ AQP L+ GDGPI LILAPTREL Sbjct: 156 IQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQPLLKPGDGPIALILAPTREL 215 Query: 374 AVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL 553 A QIQ E +FG SR R+ +YGG PKGPQIRDL+RG EI IATPGRLIDM++AG TNL Sbjct: 216 ANQIQVECNRFGGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGRLIDMVDAGKTNL 275 Query: 554 RRVTYLVLDEADRMLDMGFE 613 RRVTYLV+DEADRMLDMGFE Sbjct: 276 RRVTYLVMDEADRMLDMGFE 295
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 269 bits (688), Expect = 4e-72 Identities = 133/201 (66%), Positives = 157/201 (78%), Gaps = 1/201 (0%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREV-PKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE P V ++ EV + R+ ++ITV G +V PKP+ FH ANFP Y M + F EPT Sbjct: 57 VEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPT 116 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQ QG+P+AL GRD++GIA+TGSGKTL+Y+LP +VH+ QP LE+GDGPI L+LAPTRE Sbjct: 117 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE 176 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTN 550 LA Q+Q A +G SR +STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+G TN Sbjct: 177 LAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTN 236 Query: 551 LRRVTYLVLDEADRMLDMGFE 613 LRR TYLVLDEADRMLDMGFE Sbjct: 237 LRRCTYLVLDEADRMLDMGFE 257
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 269 bits (688), Expect = 4e-72 Identities = 133/201 (66%), Positives = 157/201 (78%), Gaps = 1/201 (0%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREV-PKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE P V ++ EV + R+ ++ITV G +V PKP+ FH ANFP Y M + F EPT Sbjct: 57 VEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPT 116 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQ QG+P+AL GRD++GIA+TGSGKTL+Y+LP +VH+ QP LE+GDGPI L+LAPTRE Sbjct: 117 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE 176 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTN 550 LA Q+Q A +G SR +STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE+G TN Sbjct: 177 LAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTN 236 Query: 551 LRRVTYLVLDEADRMLDMGFE 613 LRR TYLVLDEADRMLDMGFE Sbjct: 237 LRRCTYLVLDEADRMLDMGFE 257
>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) Length = 614 Score = 265 bits (678), Expect = 6e-71 Identities = 130/199 (65%), Positives = 152/199 (76%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P + + EV YR+ ++ITV G PKP+ F+EANFP M IA+ F EPT I Sbjct: 61 EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI 120 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 QAQGWP+AL G D++G+A+TGSGKTLSY+LP +VH+ QP LE+GDGPI L+LAPTRELA Sbjct: 121 QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA 180 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 Q+Q A ++ R +STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE G TNLR Sbjct: 181 QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR 240 Query: 557 RVTYLVLDEADRMLDMGFE 613 R TYLVLDEADRMLDMGFE Sbjct: 241 RTTYLVLDEADRMLDMGFE 259
>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA helicase DEAD1) (mDEAD1) Length = 614 Score = 263 bits (671), Expect = 4e-70 Identities = 129/199 (64%), Positives = 151/199 (75%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P + + EV YR+ ++ITV G PKP+ F+EANFP M IA+ F EPT I Sbjct: 61 EHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARHNFTEPTAI 120 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 QAQGWP+AL G D++G+A+TGSGKTLSY+LP +VH+ P LE+GDGPI L+LAPTRELA Sbjct: 121 QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHHPFLERGDGPICLVLAPTRELA 180 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 Q+Q A ++ R +STCIYGGAPKGPQIRDL RGVEI IATPGRLID LE G TNLR Sbjct: 181 QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR 240 Query: 557 RVTYLVLDEADRMLDMGFE 613 R TYLVLDEADRMLDMGFE Sbjct: 241 RTTYLVLDEADRMLDMGFE 259
>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)| Length = 719 Score = 254 bits (648), Expect = 2e-67 Identities = 127/199 (63%), Positives = 154/199 (77%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPI 196 E P V S EV +YR+ ++ITV G +VP PI+ F E + PDY M+ I + G+ PT I Sbjct: 249 EHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAI 307 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 QAQGWP+A+ G + +GIA+TGSGKTL YILP +VH+ Q L++GDGPI L+LAPTRELA Sbjct: 308 QAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELA 367 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 QIQ AT+FGS S R+TC++GGAPKG Q+RDL+RG EIVIATPGRLID L AG TNL+ Sbjct: 368 QQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLK 427 Query: 557 RVTYLVLDEADRMLDMGFE 613 R TYLVLDEADRMLDMGFE Sbjct: 428 RCTYLVLDEADRMLDMGFE 446
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 219 bits (557), Expect = 6e-57 Identities = 107/191 (56%), Positives = 139/191 (72%) Frame = +2 Query: 41 SETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMA 220 S+ Y + +I+V G +VP P+ F FP ++ + ++GF PTPIQAQ WP+A Sbjct: 120 SDISQESYCRRNEISVTGGDVPAPLTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPIA 179 Query: 221 LKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEAT 400 L+GRD++ IA+TGSGKTL Y++P +H+ Q R GP +L+L+PTRELA QIQAEA Sbjct: 180 LQGRDIVAIAKTGSGKTLGYLMPAFIHL-QQRRKNPQLGPTILVLSPTRELATQIQAEAV 238 Query: 401 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 580 KFG SR TC+YGGAPKGPQ+R+L RGV+IV+ATPGRL D+LE +L +V+YLVLD Sbjct: 239 KFGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRVSLGQVSYLVLD 298 Query: 581 EADRMLDMGFE 613 EADRMLDMGFE Sbjct: 299 EADRMLDMGFE 309
>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)| Length = 568 Score = 206 bits (523), Expect = 6e-53 Identities = 104/199 (52%), Positives = 133/199 (66%), Gaps = 2/199 (1%) Frame = +2 Query: 23 PAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHE--ANFPDYCMQAIAKSGFVEPTPI 196 P +SE E ++R+ IT+ G + P P+ F P Y ++ + F PTP+ Sbjct: 69 PEAGQLSEEEATKWREEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPV 128 Query: 197 QAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELA 376 QAQ WP+ L GRD++G+A+TGSGKTL +++P L H+ Q L GDGP+V++LAPTRELA Sbjct: 129 QAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELA 188 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 QI+ E TK C+YGGAPKGPQ+ LRRGV I++ATPGRLID L+ NL Sbjct: 189 QQIE-EETKKVIPGDVYCGCVYGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLH 247 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRMLDMGFE Sbjct: 248 RVTYLVLDEADRMLDMGFE 266
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 198 bits (504), Expect = 9e-51 Identities = 102/204 (50%), Positives = 137/204 (67%), Gaps = 4/204 (1%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE P + MS+ EV +R ++ ITV+G+ PKPI+ + + + ++ K G+ +PT Sbjct: 337 VEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPT 396 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQ Q P + GRD+IGIA+TGSGKT++++LP H+ Q LE+G+GPI +I+ PTRE Sbjct: 397 PIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRE 456 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH-- 544 LA+QI E KF R C+YGG QI +L+RG EI++ TPGR+IDML A Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516 Query: 545 -TNLRRVTYLVLDEADRMLDMGFE 613 TNLRRVTY+VLDEADRM DMGFE Sbjct: 517 VTNLRRVTYVVLDEADRMFDMGFE 540
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 198 bits (504), Expect = 9e-51 Identities = 102/204 (50%), Positives = 137/204 (67%), Gaps = 4/204 (1%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE P + MS+ EV +R ++ ITV+G+ PKPI+ + + + ++ K G+ +PT Sbjct: 337 VEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPT 396 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQ Q P + GRD+IGIA+TGSGKT++++LP H+ Q LE+G+GPI +I+ PTRE Sbjct: 397 PIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRE 456 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH-- 544 LA+QI E KF R C+YGG QI +L+RG EI++ TPGR+IDML A Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516 Query: 545 -TNLRRVTYLVLDEADRMLDMGFE 613 TNLRRVTY+VLDEADRM DMGFE Sbjct: 517 VTNLRRVTYVVLDEADRMFDMGFE 540
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 198 bits (504), Expect = 9e-51 Identities = 102/204 (50%), Positives = 137/204 (67%), Gaps = 4/204 (1%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE P + MS+ EV +R ++ ITV+G+ PKPI+ + + + ++ K G+ +PT Sbjct: 337 VEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPT 396 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQ Q P + GRD+IGIA+TGSGKT++++LP H+ Q LE+G+GPI +I+ PTRE Sbjct: 397 PIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRE 456 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH-- 544 LA+QI E KF R C+YGG QI +L+RG EI++ TPGR+IDML A Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516 Query: 545 -TNLRRVTYLVLDEADRMLDMGFE 613 TNLRRVTY+VLDEADRM DMGFE Sbjct: 517 VTNLRRVTYVVLDEADRMFDMGFE 540
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 198 bits (504), Expect = 9e-51 Identities = 102/204 (50%), Positives = 137/204 (67%), Gaps = 4/204 (1%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE P + MS+ EV +R ++ ITV+G+ PKPI+ + + + ++ K G+ +PT Sbjct: 337 VEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPT 396 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQ Q P + GRD+IGIA+TGSGKT++++LP H+ Q LE+G+GPI +I+ PTRE Sbjct: 397 PIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRE 456 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH-- 544 LA+QI E KF R C+YGG QI +L+RG EI++ TPGR+IDML A Sbjct: 457 LALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGR 516 Query: 545 -TNLRRVTYLVLDEADRMLDMGFE 613 TNLRRVTY+VLDEADRM DMGFE Sbjct: 517 VTNLRRVTYVVLDEADRMFDMGFE 540
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 193 bits (491), Expect = 3e-49 Identities = 99/204 (48%), Positives = 137/204 (67%), Gaps = 4/204 (1%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE P + MS EV++YR +L I+V+G+ PKPI+ + + + A+ K + +PT Sbjct: 305 VEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPT 364 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQAQ P + GRD+IGIA+TGSGKT++++LP H+ Q + + +GP+ +I+ PTRE Sbjct: 365 PIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRE 424 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH-- 544 LA+QI E KF R C+YGG QI +L+RG EI++ TPGR+IDML A + Sbjct: 425 LALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGR 484 Query: 545 -TNLRRVTYLVLDEADRMLDMGFE 613 TNLRRVTY+V+DEADRM DMGFE Sbjct: 485 VTNLRRVTYVVIDEADRMFDMGFE 508
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 192 bits (489), Expect = 5e-49 Identities = 101/207 (48%), Positives = 135/207 (65%), Gaps = 4/207 (1%) Frame = +2 Query: 5 HEDVECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFV 181 HE E + ++E EVA R +L I V G++VPKP++ + + + + G+ Sbjct: 562 HEPAE---LSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYE 618 Query: 182 EPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAP 361 +PTPIQ Q P + GRDVIG+A+TGSGKT++++LP H+ QP L+ DGPI LI+ P Sbjct: 619 KPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTP 678 Query: 362 TRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAG 541 TRELAVQI + F R+ C YGGAP QI +L+RG EI++ TPGR+ID+L A Sbjct: 679 TRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAAN 738 Query: 542 H---TNLRRVTYLVLDEADRMLDMGFE 613 TNL+RVTY+VLDEADRM DMGFE Sbjct: 739 QGRVTNLKRVTYVVLDEADRMFDMGFE 765
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 190 bits (483), Expect = 2e-48 Identities = 99/199 (49%), Positives = 130/199 (65%), Gaps = 4/199 (2%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRD-ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQ 205 +Q MSE Q R D ITV GR+ PKP+ + P C+ I + G+ PTPIQ+Q Sbjct: 446 IQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQ 505 Query: 206 GWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQI 385 P + GRD+IG+A+TGSGKT++++LP H+ Q +E +GP+ +I+ PTRELAVQI Sbjct: 506 AMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQI 565 Query: 386 QAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLR 556 E F R+ C+YGGAP QI ++++ +IV+ATPGRLID+L A TNL Sbjct: 566 YREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLY 625 Query: 557 RVTYLVLDEADRMLDMGFE 613 RVTYLVLDEADRM DMGFE Sbjct: 626 RVTYLVLDEADRMFDMGFE 644
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 187 bits (476), Expect = 2e-47 Identities = 101/211 (47%), Positives = 143/211 (67%), Gaps = 12/211 (5%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQ---------LRDITVEGREVPKPIRFFHEAN--FPDYCMQAI 163 E A AMS+ E +R+ L+D E R +P P F +A +P+ M+ I Sbjct: 201 ESTATSAMSKVEADSWRKENFNITWDDLKD--GEKRPIPNPTCTFDDAFQCYPEV-MENI 257 Query: 164 AKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE-QGDGP 340 K+GF +PTPIQ+Q WP+ L+G D+IG+A+TG+GKTL Y++PG +H+ QP L+ Q + P Sbjct: 258 KKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRP 317 Query: 341 IVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 520 +L+L PTRELA+Q++ E K+ SY RS C+YGG + QI +L++GV+I+IATPGRL Sbjct: 318 GMLVLTPTRELALQVEGECCKY-SYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRL 376 Query: 521 IDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 D+ + NL+ +TYLVLDEAD+MLDMGFE Sbjct: 377 NDLQMSNFVNLKNITYLVLDEADKMLDMGFE 407
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 185 bits (470), Expect = 8e-47 Identities = 100/210 (47%), Positives = 144/210 (68%), Gaps = 10/210 (4%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLR-DITV------EGREVPKPIRFFHEA--NFPDYCMQAIA 166 +E A MSE +V +R+ +IT E R +PKP F +A +PD +++I Sbjct: 180 IESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPDL-LKSII 238 Query: 167 KSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQP-RLEQGDGPI 343 + G ++PTPIQ+Q WP+ L+G D+I +A+TG+GKTLSY++PG +H+ +QP EQ +GP Sbjct: 239 RVGILKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPG 298 Query: 344 VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLI 523 +L+L PTRELA+ ++AE +K+ SY +S CIYGG + QI D+ +GV+I+IATPGRL Sbjct: 299 MLVLTPTRELALHVEAECSKY-SYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLN 357 Query: 524 DMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 D+ NLR +TYLV+DEAD+MLDM FE Sbjct: 358 DLQMNNSVNLRSITYLVIDEADKMLDMEFE 387
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 185 bits (469), Expect = 1e-46 Identities = 99/197 (50%), Positives = 127/197 (64%), Gaps = 4/197 (2%) Frame = +2 Query: 35 AMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGW 211 AMSE E A R +L I V G EVP+P+ + + + I + G+ PT IQAQ Sbjct: 526 AMSEEEAASLRLELDGIKVRGVEVPRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAI 585 Query: 212 PMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQA 391 P + GRDVIG+A+TGSGKT+++++P H+ Q LE +GP+ LI+ PTRELA QI Sbjct: 586 PAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHK 645 Query: 392 EATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRV 562 + F R+ C YGGAP QI DL+RG EI++ TPGR+ID+L A TNLRRV Sbjct: 646 DCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRV 705 Query: 563 TYLVLDEADRMLDMGFE 613 TY+VLDEADRM DMGFE Sbjct: 706 TYVVLDEADRMFDMGFE 722
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 183 bits (464), Expect = 4e-46 Identities = 99/196 (50%), Positives = 126/196 (64%), Gaps = 4/196 (2%) Frame = +2 Query: 38 MSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWP 214 MSE E A R +L I V G +VPKP++ + + + I K GF T IQAQ P Sbjct: 514 MSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIP 573 Query: 215 MALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAE 394 + GRDVIG+A+TGSGKT+++++P H+ Q LE +GPI LI+ PTRELA QI + Sbjct: 574 AIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKD 633 Query: 395 ATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVT 565 F R+ C YGGAP QI +L+RG EI++ TPGR+ID+L A TNLRRVT Sbjct: 634 CKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVT 693 Query: 566 YLVLDEADRMLDMGFE 613 Y+VLDEADRM DMGFE Sbjct: 694 YVVLDEADRMFDMGFE 709
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 181 bits (459), Expect = 1e-45 Identities = 97/196 (49%), Positives = 126/196 (64%), Gaps = 4/196 (2%) Frame = +2 Query: 38 MSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWP 214 M++ E A R +L I V G +VPKP+ + + + I K G+ PT IQ+Q P Sbjct: 548 MTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQAIP 607 Query: 215 MALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAE 394 + GRDVIG+A+TGSGKT+++++P H+ Q LE +GPI LI+ PTRELA QI + Sbjct: 608 AIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKD 667 Query: 395 ATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRVT 565 F R+ C YGGAP QI +L+RG EIV+ TPGR+ID+L A TNLRRVT Sbjct: 668 CKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVT 727 Query: 566 YLVLDEADRMLDMGFE 613 Y+VLDEADRM DMGFE Sbjct: 728 YVVLDEADRMFDMGFE 743
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 180 bits (457), Expect = 3e-45 Identities = 96/196 (48%), Positives = 132/196 (67%), Gaps = 4/196 (2%) Frame = +2 Query: 38 MSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPM 217 M++ + +R+ IT +G ++P PIR + +++ P + ++ I K G+ EPTPIQ Q P+ Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424 Query: 218 ALKGRDVIGIAETGSGKTLSYILPGLVHVGAQP---RLEQGD-GPIVLILAPTRELAVQI 385 L+ RD+IG+AETGSGKT ++++P LV + P R+E+ D GP +ILAPTRELA QI Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQI 484 Query: 386 QAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVT 565 + E KFG R+ + GG + Q LR G EIVIATPGRLID+LE + L R T Sbjct: 485 EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCT 544 Query: 566 YLVLDEADRMLDMGFE 613 Y+VLDEADRM+DMGFE Sbjct: 545 YVVLDEADRMIDMGFE 560
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 179 bits (455), Expect = 4e-45 Identities = 98/204 (48%), Positives = 127/204 (62%), Gaps = 4/204 (1%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRD-ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE ++ +S EV + R D I + G + PKP+ + + + I G+ +PT Sbjct: 383 VEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPT 442 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 IQAQ P GRDVIG+A+TGSGKT++++LP H+ Q L+ G+GPI +I+ PTRE Sbjct: 443 SIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRE 502 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH-- 544 LAVQI E F R+ C YGGAP QI DL+RG EIV+ TPGR+ID+L A Sbjct: 503 LAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGR 562 Query: 545 -TNLRRVTYLVLDEADRMLDMGFE 613 TNL R TYLVLDEADRM D+GFE Sbjct: 563 VTNLHRCTYLVLDEADRMFDLGFE 586
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 179 bits (453), Expect = 7e-45 Identities = 98/204 (48%), Positives = 128/204 (62%), Gaps = 4/204 (1%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE + MSE E+A+ R +L I V G+ +PKP++ + + + I GF +PT Sbjct: 526 VEPYELSHMSEEELAELRLELDGIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPT 585 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQ Q P+ + GRDVIG+A+TGSGKT+++ LP L HV Q + DG I LI+ PTRE Sbjct: 586 PIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRHVKDQDPVTGDDGAIALIMTPTRE 645 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH-- 544 L QI ++ F + R YGG QI +L+RG EI++ATPGRLID+L A Sbjct: 646 LCTQIYSDLQPFAKALKLRVVAAYGGNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGR 705 Query: 545 -TNLRRVTYLVLDEADRMLDMGFE 613 TNL+R TYLVLDEADRM DMGFE Sbjct: 706 VTNLKRATYLVLDEADRMFDMGFE 729
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 177 bits (450), Expect = 2e-44 Identities = 95/196 (48%), Positives = 131/196 (66%), Gaps = 4/196 (2%) Frame = +2 Query: 38 MSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPM 217 M++ + +R+ IT +G ++P PIR + +++ P + ++ I K G+ EPTPIQ Q P+ Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424 Query: 218 ALKGRDVIGIAETGSGKTLSYILPGLVHVGAQP---RLEQGD-GPIVLILAPTRELAVQI 385 L+ RD+IG+AETGSGKT ++++P LV + P R+E+ D GP +ILAPTRELA QI Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQI 484 Query: 386 QAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVT 565 + E KFG R+ + GG + Q LR G EIVIATPGRLID+LE + R T Sbjct: 485 EEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVPSRCT 544 Query: 566 YLVLDEADRMLDMGFE 613 Y+VLDEADRM+DMGFE Sbjct: 545 YVVLDEADRMIDMGFE 560
>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 913 Score = 174 bits (440), Expect = 2e-43 Identities = 96/197 (48%), Positives = 125/197 (63%), Gaps = 5/197 (2%) Frame = +2 Query: 38 MSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAI-AKSGFVEPTPIQAQGW 211 + E EVA R +L I V G +PI + + P M I + + P+ IQAQ Sbjct: 289 LPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAI 348 Query: 212 PMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQA 391 P + GRD+IG+A+TGSGKTLS++LP L H+ QP L +GDGPI LI+ PTRELA+QI Sbjct: 349 PAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHK 408 Query: 392 EATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLRRV 562 E F S C +GG+ QI +L++G +I++ TPGR+ID+L A TNL+RV Sbjct: 409 ELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRV 468 Query: 563 TYLVLDEADRMLDMGFE 613 TYLVLDEADRM DMGFE Sbjct: 469 TYLVLDEADRMFDMGFE 485
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 171 bits (434), Expect = 1e-42 Identities = 90/199 (45%), Positives = 124/199 (62%), Gaps = 4/199 (2%) Frame = +2 Query: 29 VQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQ 205 V M E E R ++ I + G++ PKP+R + P C+ I G+ PT IQAQ Sbjct: 373 VLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIKHQGWETPTSIQAQ 432 Query: 206 GWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQI 385 P + GRDVIGIA+TGSGKT++++LP L HV Q + +GPI ++++PTRELA QI Sbjct: 433 AIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQI 492 Query: 386 QAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH---TNLR 556 E F R++C GG+ I +++G E+VI TPGR+ID+L A + TN+R Sbjct: 493 YKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVR 552 Query: 557 RVTYLVLDEADRMLDMGFE 613 R TY+V+DEADRM DMGFE Sbjct: 553 RTTYIVMDEADRMFDMGFE 571
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 167 bits (423), Expect = 2e-41 Identities = 98/205 (47%), Positives = 130/205 (63%), Gaps = 6/205 (2%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQ-LRDITVEGREVPKPIRFFHEANFPDYCMQAIA-KSGFVEPT 190 E + A+S+ +V RQ L +I V+G +VP+PI + P I K F +P+ Sbjct: 259 EAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPS 318 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 IQ+Q P L GRDVIGIA+TGSGKTLSY+LP L H+ Q + GPI LIL+PTRE Sbjct: 319 AIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRE 378 Query: 371 LAVQIQAEATKFGSYSRT-RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH- 544 LA+QI+ E F + R C YGG+ QI +L++GVEI++ TPGR+ID+L A Sbjct: 379 LALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSG 438 Query: 545 --TNLRRVTYLVLDEADRMLDMGFE 613 NL+R T++VLDEADRM D+GFE Sbjct: 439 RVLNLKRCTFVVLDEADRMFDLGFE 463
>PRP5_ASHGO (Q754U8) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 166 bits (420), Expect = 5e-41 Identities = 100/203 (49%), Positives = 131/203 (64%), Gaps = 8/203 (3%) Frame = +2 Query: 29 VQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKS-GFVEPTPIQA 202 + +SE EVA R L ++ V GR+ P+PI + + M + + F PTPIQA Sbjct: 206 ISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLLTRELEFTVPTPIQA 265 Query: 203 QGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD--GPIVLILAPTRELA 376 Q P + GRDVIGI++TGSGKT+S+ILP L + AQ L GD GP+ LIL+PTRELA Sbjct: 266 QAIPAIMSGRDVIGISKTGSGKTVSFILPLLRQIKAQRPL-GGDETGPLGLILSPTRELA 324 Query: 377 VQIQAEATKFGSYSRT-RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL 553 +QI E TKF S + RS C GG+ QI D++RGVEIVIATPGR ID+L NL Sbjct: 325 LQIHEEVTKFTSGDPSIRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNL 384 Query: 554 ---RRVTYLVLDEADRMLDMGFE 613 +R+ ++V+DEADR+ D+GFE Sbjct: 385 INPKRIVFVVMDEADRLFDLGFE 407
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 164 bits (415), Expect = 2e-40 Identities = 99/207 (47%), Positives = 129/207 (62%), Gaps = 7/207 (3%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIA-KSGFVEP 187 +E V +MSE EV + R L +I ++G PKP+ + + M I K F Sbjct: 220 IESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSL 279 Query: 188 TPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQ-PRLEQGDGPIVLILAPT 364 TPIQ+Q P + GRDVIGI++TGSGKT+SY+LP L V AQ P + GP+ LILAPT Sbjct: 280 TPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPT 339 Query: 365 RELAVQIQAEATKFGSYSRT-RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAG 541 RELA+QI E TKF + RS C GG+ QI DL+RG EIV+ATPGR ID+L Sbjct: 340 RELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLN 399 Query: 542 HTNL---RRVTYLVLDEADRMLDMGFE 613 L +R+T++V+DEADR+ D+GFE Sbjct: 400 DGKLLSTKRITFVVMDEADRLFDLGFE 426
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 164 bits (414), Expect = 2e-40 Identities = 86/200 (43%), Positives = 125/200 (62%), Gaps = 5/200 (2%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 ++ M E + +++ +I+ +G VP P+R + E+ P M+ + K G+ EPTPIQ Sbjct: 338 LEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESGLPKRLMELVNKVGYKEPTPIQRAA 397 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQ-----GDGPIVLILAPTREL 373 P+A++ RD+IG+A TGSGKT S++LP LV++ PR+++ DGP ++LAPTREL Sbjct: 398 IPIAMQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTREL 457 Query: 374 AVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL 553 A QI+ EA KF I GG Q LR G EI+IATPGRL+D +E L Sbjct: 458 AQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVL 517 Query: 554 RRVTYLVLDEADRMLDMGFE 613 + Y+++DEADRM+D+GFE Sbjct: 518 SQCCYVIMDEADRMIDLGFE 537
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 162 bits (409), Expect = 9e-40 Identities = 85/200 (42%), Positives = 125/200 (62%), Gaps = 5/200 (2%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 ++ M E + +++ +I+ +G VP P+R + E+ P ++ + + G+ EPTPIQ Sbjct: 335 LEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPIQRAA 394 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQ-----GDGPIVLILAPTREL 373 P+AL+ RD+IG+A TGSGKT S++LP LV++ PR+++ DGP ++LAPTREL Sbjct: 395 IPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTREL 454 Query: 374 AVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL 553 A QI+ EA KF I GG Q LR G EI+IATPGRL+D +E L Sbjct: 455 AQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRLLVL 514 Query: 554 RRVTYLVLDEADRMLDMGFE 613 + Y+++DEADRM+D+GFE Sbjct: 515 SQCCYVIMDEADRMIDLGFE 534
>PRP5_KLULA (Q6CKI1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 812 Score = 160 bits (405), Expect = 3e-39 Identities = 92/197 (46%), Positives = 128/197 (64%), Gaps = 6/197 (3%) Frame = +2 Query: 38 MSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKS-GFVEPTPIQAQGW 211 MSE +V + R L +I + G++ PKP+ + + M I+ FV TPIQ Q Sbjct: 218 MSEKDVEELRLSLDNIKISGKDCPKPVTKWSQLGLSSEIMDLISNELQFVTLTPIQCQAI 277 Query: 212 PMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQ 388 P + GRDVIGI++TGSGKT++++LP + + AQP L + GPI LIL PTRELAVQIQ Sbjct: 278 PAIMSGRDVIGISKTGSGKTVAFLLPLVRQIKAQPPLAPDETGPIGLILTPTRELAVQIQ 337 Query: 389 AEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM--LEAGH-TNLRR 559 EA KF S S C GG+ QI +L+RGV+I++ATPGR ID+ L +GH + R Sbjct: 338 EEALKFCKGSGISSICCVGGSELKQQINELKRGVDIIVATPGRFIDLMTLNSGHLLSPTR 397 Query: 560 VTYLVLDEADRMLDMGF 610 ++++V+DEADR+ D+GF Sbjct: 398 ISFVVMDEADRLFDLGF 414
>PRP5_CANGA (Q6FML5) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 157 bits (396), Expect = 3e-38 Identities = 91/201 (45%), Positives = 125/201 (62%), Gaps = 6/201 (2%) Frame = +2 Query: 29 VQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKS-GFVEPTPIQA 202 +++ +E E+A R L +I +EG++ P+P+ + + P ++ I + TPIQ Sbjct: 221 IKSYTEDEIADLRLDLDNIKIEGKDCPRPVTKWSQLGIPYDIIRFIKDVFSYKSLTPIQT 280 Query: 203 QGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAV 379 Q P + GRDVIGI++TGSGKT+SY+LP + HV AQ +L G+ GPI +I APTRELAV Sbjct: 281 QTIPAIMSGRDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAV 340 Query: 380 QIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL-- 553 QI E K S S C GG+ QI L+ GVEI IATPGR ID+L NL Sbjct: 341 QINEEVQKLISDLDISSICCTGGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVS 400 Query: 554 -RRVTYLVLDEADRMLDMGFE 613 R++++V+DEADR+ D GFE Sbjct: 401 TLRISFVVMDEADRLFDFGFE 421
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 155 bits (393), Expect = 7e-38 Identities = 85/188 (45%), Positives = 113/188 (60%), Gaps = 10/188 (5%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + G++VP+PI F + M+ I + F +PTP+Q P+ KGRD++ A+TG Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTG 201 Query: 260 SGKTLSYILP---GLVHVGAQPRLEQGDG-------PIVLILAPTRELAVQIQAEATKFG 409 SGKT ++ P L G P E+ P L+LAPTRELA QI EA KF Sbjct: 202 SGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFT 261 Query: 410 SYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEAD 589 S R +YGGAP G Q+R++ RG ++++ATPGRL D+LE G +L + YLVLDEAD Sbjct: 262 YRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEAD 321 Query: 590 RMLDMGFE 613 RMLDMGFE Sbjct: 322 RMLDMGFE 329
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)| Length = 697 Score = 155 bits (393), Expect = 7e-38 Identities = 89/199 (44%), Positives = 116/199 (58%), Gaps = 15/199 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G P I FH+ + M I + + PTP+Q P+ ++ RD Sbjct: 201 FEKYDDIPVEATGSNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRD 260 Query: 236 VIGIAETGSGKTLSYILPGLVHV------GAQPRLEQGDG-------PIVLILAPTRELA 376 ++ A+TGSGKT +++LP L + A L++ P+ L+LAPTRELA Sbjct: 261 LMACAQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELA 320 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQI EA KF SR R +YGGA G QIRDL RG +++ATPGRL+DM+E G L Sbjct: 321 VQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 380 Query: 557 RVTYLVLDEADRMLDMGFE 613 YLVLDEADRMLDMGFE Sbjct: 381 FCKYLVLDEADRMLDMGFE 399
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 155 bits (392), Expect = 9e-38 Identities = 83/195 (42%), Positives = 120/195 (61%), Gaps = 3/195 (1%) Frame = +2 Query: 38 MSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPM 217 M E + +++ I +G +P P+R + E+N P + + G+ +P+PIQ P+ Sbjct: 262 MRERDWRIFKEDFGIATKGGMIPNPMRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPI 321 Query: 218 ALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQ---GDGPIVLILAPTRELAVQIQ 388 AL+ RD+IG+A TGSGKT +++LP LV++ P L++ DGP LI+APTREL QI+ Sbjct: 322 ALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEINKHDGPYALIMAPTRELVQQIE 381 Query: 389 AEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTY 568 EA KF R I GG Q +LR G EIV+ATPGRL+D +E L + Y Sbjct: 382 TEARKFAGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPGRLLDCIERRLLVLSQCCY 441 Query: 569 LVLDEADRMLDMGFE 613 +++DEADRM+D+GFE Sbjct: 442 VIMDEADRMIDLGFE 456
>PRP28_NEUCR (Q7SEL0) Pre-mRNA splicing ATP-dependent RNA helicase prp-28 (EC| 3.6.1.-) Length = 728 Score = 153 bits (387), Expect = 3e-37 Identities = 83/198 (41%), Positives = 117/198 (59%), Gaps = 3/198 (1%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 ++ M E + +++ I +G +P P+R + E+ P + + G+ EPTPIQ Sbjct: 264 LEDMKERDWRIFKENFGIATKGGAIPNPMRSWEESTLPRRLLDIVKNVGYDEPTPIQRAA 323 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQ---GDGPIVLILAPTRELAV 379 P+AL+ RD+IG+A TGSGKT +++LP LV++ P L + DGP LILAPTREL Sbjct: 324 IPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLTEYNKNDGPYALILAPTRELVQ 383 Query: 380 QIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRR 559 QI++EA KF + I GG Q LR G EI++ATPGRL+D LE + Sbjct: 384 QIESEAKKFATPLGFTVVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCLERRLLVFSQ 443 Query: 560 VTYLVLDEADRMLDMGFE 613 Y ++DEADRM+D GFE Sbjct: 444 CCYTIMDEADRMIDQGFE 461
>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related sequence 2) Length = 661 Score = 152 bits (385), Expect = 6e-37 Identities = 90/199 (45%), Positives = 115/199 (57%), Gaps = 15/199 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G P I F + + M I + + PTP+Q P+ + RD Sbjct: 159 FEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRD 218 Query: 236 VIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELA 376 ++ A+TGSGKT +++LP L + G R + +G PI L+LAPTRELA Sbjct: 219 LMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELA 278 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQI EA KF SR R +YGGA G QIRDL RG +++ATPGRL+DM+E G L Sbjct: 279 VQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 338 Query: 557 RVTYLVLDEADRMLDMGFE 613 YLVLDEADRMLDMGFE Sbjct: 339 FCKYLVLDEADRMLDMGFE 357
>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (Helicase-like protein 2) (HLP2) (DEAD box, X isoform) Length = 661 Score = 152 bits (385), Expect = 6e-37 Identities = 90/199 (45%), Positives = 115/199 (57%), Gaps = 15/199 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G P I F + + M I + + PTP+Q P+ + RD Sbjct: 159 FEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRD 218 Query: 236 VIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELA 376 ++ A+TGSGKT +++LP L + G R + +G PI L+LAPTRELA Sbjct: 219 LMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELA 278 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQI EA KF SR R +YGGA G QIRDL RG +++ATPGRL+DM+E G L Sbjct: 279 VQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 338 Query: 557 RVTYLVLDEADRMLDMGFE 613 YLVLDEADRMLDMGFE Sbjct: 339 FCKYLVLDEADRMLDMGFE 357
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 152 bits (385), Expect = 6e-37 Identities = 90/199 (45%), Positives = 115/199 (57%), Gaps = 15/199 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G P I F + + M I + + PTP+Q P+ + RD Sbjct: 159 FEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRD 218 Query: 236 VIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELA 376 ++ A+TGSGKT +++LP L + G R + +G PI L+LAPTRELA Sbjct: 219 LMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELA 278 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQI EA KF SR R +YGGA G QIRDL RG +++ATPGRL+DM+E G L Sbjct: 279 VQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 338 Query: 557 RVTYLVLDEADRMLDMGFE 613 YLVLDEADRMLDMGFE Sbjct: 339 FCKYLVLDEADRMLDMGFE 357
>DBP3_YARLI (Q6C9P3) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 532 Score = 152 bits (384), Expect = 7e-37 Identities = 85/202 (42%), Positives = 121/202 (59%) Frame = +2 Query: 8 EDVECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEP 187 E +C + +S++ + Y + IT+EG ++ + F H P + + K F P Sbjct: 91 EYTQCDDLTNVSQSTIDNYFKEHTITIEGEQMRPTMEFSHVTLDPRIT-KVLTK--FPRP 147 Query: 188 TPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTR 367 TPIQA WP L G+D++G+AETGSGKT ++ +P L HV + G G VL+++PTR Sbjct: 148 TPIQAVSWPYLLAGKDMVGVAETGSGKTFTFAVPALEHVLS---TSGGKGVRVLVVSPTR 204 Query: 368 ELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHT 547 ELA+QI + + C+YGG PK Q DL+R VIATPGRL D+++ G Sbjct: 205 ELAMQIYDNIKELCDVVGLHAVCVYGGVPKEQQRSDLKR-ASFVIATPGRLCDLIDEGSC 263 Query: 548 NLRRVTYLVLDEADRMLDMGFE 613 +L +V+YLVLDEADRML+ GFE Sbjct: 264 DLSKVSYLVLDEADRMLEKGFE 285
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 151 bits (381), Expect = 2e-36 Identities = 81/198 (40%), Positives = 121/198 (61%), Gaps = 3/198 (1%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 ++AM + ++ +I+++G ++P P+R + EA P ++ + K + EP+ IQ Sbjct: 220 LEAMKPRDWRILKEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAA 279 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD---GPIVLILAPTRELAV 379 P+ L+ +D+IGIAETGSGKT ++I+P ++ + P L + + GP ++LAPTRELA Sbjct: 280 IPVLLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQ 339 Query: 380 QIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRR 559 QIQ E KF R + GG Q + +G IV+ATPGRL+D LE L + Sbjct: 340 QIQVEGNKFAEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQ 399 Query: 560 VTYLVLDEADRMLDMGFE 613 TY+V+DEADRMLDMGFE Sbjct: 400 CTYVVMDEADRMLDMGFE 417
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 150 bits (378), Expect = 4e-36 Identities = 86/212 (40%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPT 190 VE + M+E E + R L I + G++ PKPI + + P M + + +PT Sbjct: 343 VESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWTQLGLPGPTMGVLNDLRYDKPT 402 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE--------QGDGPIV 346 IQAQ P + GRDVI +A+TGSGKTL+++LP L H+ + +E P+ Sbjct: 403 SIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLG 462 Query: 347 LILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 526 +I+ PTREL VQI + F + + C YGG+P QI L++G I++ TPGR+ID Sbjct: 463 VIITPTRELCVQIYRDLRPFLAALELTAVCAYGGSPIKDQIAALKKGTHIIVCTPGRMID 522 Query: 527 MLEAGH---TNLRRVTYLVLDEADRMLDMGFE 613 +L A +L RVT+LV+DEADRM DMGFE Sbjct: 523 LLAANQGRVLSLSRVTFLVIDEADRMFDMGFE 554
>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 149 bits (377), Expect = 5e-36 Identities = 89/199 (44%), Positives = 115/199 (57%), Gaps = 15/199 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G P I F + + + M I + + PTP+Q P+ RD Sbjct: 158 FEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRD 217 Query: 236 VIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELA 376 ++ A+TGSGKT +++LP L + G + + +G PI L+LAPTRELA Sbjct: 218 LMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELA 277 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQI EA KF SR R +YGGA G QIRDL RG +++ATPGRL+DM+E G L Sbjct: 278 VQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 337 Query: 557 RVTYLVLDEADRMLDMGFE 613 YLVLDEADRMLDMGFE Sbjct: 338 FCKYLVLDEADRMLDMGFE 356
>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 658 Score = 149 bits (377), Expect = 5e-36 Identities = 89/199 (44%), Positives = 115/199 (57%), Gaps = 15/199 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G P I F + + + M I + + PTP+Q P+ RD Sbjct: 158 FEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRD 217 Query: 236 VIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELA 376 ++ A+TGSGKT +++LP L + G + + +G PI L+LAPTRELA Sbjct: 218 LMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELA 277 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQI EA KF SR R +YGGA G QIRDL RG +++ATPGRL+DM+E G L Sbjct: 278 VQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 337 Query: 557 RVTYLVLDEADRMLDMGFE 613 YLVLDEADRMLDMGFE Sbjct: 338 FCKYLVLDEADRMLDMGFE 356
>DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 674 Score = 149 bits (377), Expect = 5e-36 Identities = 85/195 (43%), Positives = 112/195 (57%), Gaps = 16/195 (8%) Frame = +2 Query: 77 DITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIA 250 DI VE G +VP+P+ F D+ + I + + PTP+Q P+ + GRD++ A Sbjct: 173 DIPVEASGHDVPEPVNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACA 232 Query: 251 ETGSGKTLSYILPGL---VHVGAQPRLEQGDG-----------PIVLILAPTRELAVQIQ 388 +TGSGKT ++ P L G P Q G P LILAPTREL QI Sbjct: 233 QTGSGKTGGFLFPILSQAFQTGPSPVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIF 292 Query: 389 AEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTY 568 EA KF S R +YGGA G Q+R + RG ++++ATPGRL+D++E G +L + Y Sbjct: 293 DEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKY 352 Query: 569 LVLDEADRMLDMGFE 613 LVLDEADRMLDMGFE Sbjct: 353 LVLDEADRMLDMGFE 367
>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 149 bits (376), Expect = 6e-36 Identities = 89/199 (44%), Positives = 115/199 (57%), Gaps = 15/199 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G P I F + + + M I + + PTP+Q P+ RD Sbjct: 158 FEKYDDIPVEATGSNCPPHIENFGDIDMGEIIMGNIQLTRYTRPTPVQKHAIPIIKGKRD 217 Query: 236 VIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELA 376 ++ A+TGSGKT +++LP L + G + + +G PI L+LAPTRELA Sbjct: 218 LMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELA 277 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQI EA KF SR R +YGGA G QIRDL RG +++ATPGRL+DM+E G L Sbjct: 278 VQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 337 Query: 557 RVTYLVLDEADRMLDMGFE 613 YLVLDEADRMLDMGFE Sbjct: 338 FCKYLVLDEADRMLDMGFE 356
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 149 bits (376), Expect = 6e-36 Identities = 81/188 (43%), Positives = 112/188 (59%), Gaps = 10/188 (5%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + G++VP+PI F ++ I + F +PTP+Q P+ GRD++ A+TG Sbjct: 130 VDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTG 189 Query: 260 SGKTLSYILPGLVH---VGAQPRLEQGDG-------PIVLILAPTRELAVQIQAEATKFG 409 SGKT ++ P L G P+ E P +I+APTRELA QI EA KF Sbjct: 190 SGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFT 249 Query: 410 SYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEAD 589 S ++ +YGG+P G Q+R++ RG ++++ATPGRL D+LE G +L V YLVLDEAD Sbjct: 250 YRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEAD 309 Query: 590 RMLDMGFE 613 RMLDMGFE Sbjct: 310 RMLDMGFE 317
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 149 bits (375), Expect = 8e-36 Identities = 80/195 (41%), Positives = 117/195 (60%), Gaps = 3/195 (1%) Frame = +2 Query: 38 MSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPM 217 M E + +R+ I G +P P+R + E+ P + I + G+ EP+PIQ Q P+ Sbjct: 289 MKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPI 348 Query: 218 ALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD---GPIVLILAPTRELAVQIQ 388 ++ RD+IG+A+TGSGKT ++++P L ++G P L + GP LI+APTRELA QI+ Sbjct: 349 GMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIE 408 Query: 389 AEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTY 568 E +F + I GG Q LR G EI+IATPGRL DM++ + + Y Sbjct: 409 TETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCRY 468 Query: 569 LVLDEADRMLDMGFE 613 +V+DEADRM+D+GFE Sbjct: 469 VVMDEADRMVDLGFE 483
>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 504 Score = 148 bits (374), Expect = 1e-35 Identities = 82/193 (42%), Positives = 119/193 (61%), Gaps = 2/193 (1%) Frame = +2 Query: 41 SETEVAQYRQLRDITVEGREVPKPIRF--FHEANFPDYCMQAIAKSGFVEPTPIQAQGWP 214 S++++ ++ + ++TV + + F + +F D + I+K F +PTPIQA WP Sbjct: 67 SQSDIDEFLKENEVTVSDPSGSNIVPYLDFSQVSFIDQIQKEISK--FPKPTPIQAVSWP 124 Query: 215 MALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAE 394 L G+DVIGIAETGSGKT ++ +P + ++ ++ VL+++PTRELA QI Sbjct: 125 YLLAGKDVIGIAETGSGKTFAFGVPAINNIVTSG--DKSSSVKVLVISPTRELASQIYDN 182 Query: 395 ATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLV 574 RS C+YGG PK Q DLRR ++V+ATPGRL+D++E G +L V YLV Sbjct: 183 LIVLTDACGLRSCCVYGGVPKDQQREDLRRS-QVVVATPGRLLDLIEEGSVDLSHVNYLV 241 Query: 575 LDEADRMLDMGFE 613 LDEADRML+ GFE Sbjct: 242 LDEADRMLEKGFE 254
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 148 bits (373), Expect = 1e-35 Identities = 88/199 (44%), Positives = 114/199 (57%), Gaps = 15/199 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G P I F + + M I + + PTP+Q P+ + RD Sbjct: 159 FEKYDDIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRD 218 Query: 236 VIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTRELA 376 ++ A+TGSGKT +++LP L + G + + +G PI L+LAPTRELA Sbjct: 219 LMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELA 278 Query: 377 VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 556 VQI EA KF SR R +YGGA QIRDL RG +++ATPGRL+DM+E G L Sbjct: 279 VQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 338 Query: 557 RVTYLVLDEADRMLDMGFE 613 YLVLDEADRMLDMGFE Sbjct: 339 FCKYLVLDEADRMLDMGFE 357
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 147 bits (372), Expect = 2e-35 Identities = 79/182 (43%), Positives = 117/182 (64%), Gaps = 4/182 (2%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEAN-FPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAET 256 +T G +P P+R ++E P I++ G+ EPTPIQ P+AL RDVIG+AET Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAET 209 Query: 257 GSGKTLSYILPGLVHVGAQPRLEQG---DGPIVLILAPTRELAVQIQAEATKFGSYSRTR 427 GSGKT S+++P + ++ P+L++ +GP LILAPTRELA+QI+ EA KF + + Sbjct: 210 GSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGFK 269 Query: 428 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMG 607 + GG Q ++ G E+++ATPGRL+D+++ L + Y+V+DEADRM+DMG Sbjct: 270 VVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMG 329 Query: 608 FE 613 FE Sbjct: 330 FE 331
>ABS_DROME (Q9V3C0) ATP-dependent RNA helicase abstrakt (EC 3.6.1.-) (DEAD box| protein abstrakt) Length = 619 Score = 147 bits (372), Expect = 2e-35 Identities = 88/204 (43%), Positives = 111/204 (54%), Gaps = 9/204 (4%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 ++ MSE E R I VEG PIR F E FP + +A G PTPIQ QG Sbjct: 148 IREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQG 207 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQP---RLEQGDGPIVLILAPTRELAV 379 P L GRD+IGIA TGSGKTL ++LP ++ Q E+ +GP LI+ P+RELA Sbjct: 208 LPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAK 267 Query: 380 QIQAEATKFGSYSRT------RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAG 541 Q + + + RS GG P + + RGV IV+ATPGRL+DML+ Sbjct: 268 QTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKK 327 Query: 542 HTNLRRVTYLVLDEADRMLDMGFE 613 L YL +DEADRM+DMGFE Sbjct: 328 ILTLDMCRYLCMDEADRMIDMGFE 351
>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)| Length = 688 Score = 147 bits (371), Expect = 2e-35 Identities = 84/198 (42%), Positives = 113/198 (57%), Gaps = 14/198 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G VP+P+ F ++ + I + + PTP+Q P+ + GRD Sbjct: 174 FEKYDDIPVEASGDNVPEPVLTFSNPPLDNHLISNIQLARYNVPTPVQKYSIPIVMGGRD 233 Query: 236 VIGIAETGSGKTLSYILPGL---VHVGAQPRLEQGDG---------PIVLILAPTRELAV 379 ++ A+TGSGKT ++ P L H G P G P LILAPTREL Sbjct: 234 LMACAQTGSGKTGGFLFPILSQSFHTGPSPIPASAAGAYGRQRKAYPTALILAPTRELVS 293 Query: 380 QIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRR 559 QI EA KF S R +YGGA G Q+R + RG ++++ATPGRL+D++E G +L Sbjct: 294 QIYDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCN 353 Query: 560 VTYLVLDEADRMLDMGFE 613 + YLVLDEADRMLDMGFE Sbjct: 354 IKYLVLDEADRMLDMGFE 371
>DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 503 Score = 147 bits (371), Expect = 2e-35 Identities = 88/203 (43%), Positives = 120/203 (59%), Gaps = 3/203 (1%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAK--SGFVEP 187 V+ PA+ +S+ E+ Q+ I V P+R + I S F P Sbjct: 49 VQSPALGDLSQIEIDQFLAKHCIKVTDSSEAPPLRPIMSFSHLPSSFSKIYDPLSSFSSP 108 Query: 188 TPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDG-PIVLILAPT 364 TPIQ+ WP+ GRDVIGIAETGSGKTL++ LP + + ++++ P +I++PT Sbjct: 109 TPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCIKKILDSGKVKRKHARPAAVIISPT 168 Query: 365 RELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH 544 RELA+QI + +KFG+ R TCIYGG K Q R+ + IV+ATPGRL D+ + G Sbjct: 169 RELAMQIYDQLSKFGASVDIRVTCIYGGVKKDEQ-REALKTAAIVVATPGRLKDLKDDGS 227 Query: 545 TNLRRVTYLVLDEADRMLDMGFE 613 +L +V YLVLDEADRMLD GFE Sbjct: 228 VDLGKVKYLVLDEADRMLDKGFE 250
>DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 675 Score = 147 bits (370), Expect = 3e-35 Identities = 83/195 (42%), Positives = 111/195 (56%), Gaps = 16/195 (8%) Frame = +2 Query: 77 DITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIA 250 DI VE G+ VP+P+ F D+ + I + + PTP+Q P+ + GRD++ A Sbjct: 171 DIPVEASGQNVPEPVNAFTNPPLDDHLIANITLAHYQTPTPVQKYSIPIVMNGRDLMACA 230 Query: 251 ETGSGKTLSYILPGLVHV---GAQPRLEQGDG-----------PIVLILAPTRELAVQIQ 388 +TGSGKT ++ P L G P G P LILAPTREL QI Sbjct: 231 QTGSGKTGGFLFPILSQAFQNGPSPTPAPASGQFSYGRQRKAYPTSLILAPTRELVSQIF 290 Query: 389 AEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTY 568 EA KF S R +YGGA G Q+R + RG ++++ATPGRL+D++E G +L + Y Sbjct: 291 DEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKY 350 Query: 569 LVLDEADRMLDMGFE 613 L+LDEADRMLDMGFE Sbjct: 351 LILDEADRMLDMGFE 365
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 145 bits (367), Expect = 7e-35 Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 10/194 (5%) Frame = +2 Query: 62 YRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKS-GFVEPTPIQAQGWPMALKGRDV 238 +++ +IT +G ++ P+R + E+ P + + K+ G+ PTPIQ P+AL GRD+ Sbjct: 136 FKEDYNITSKGGDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDI 195 Query: 239 IGIAETGSGKTLSYILPGLVHVGA---------QPRLEQGDGPIVLILAPTRELAVQIQA 391 +GIAETGSGKTL+++LP ++ + + + P+ LILAPTRELA+QI Sbjct: 196 VGIAETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQITK 255 Query: 392 EATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYL 571 EA FG I GG + +R GV IV+ATPGRLID LE G NL + Sbjct: 256 EAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFF 315 Query: 572 VLDEADRMLDMGFE 613 +DEAD+M+DMGFE Sbjct: 316 TMDEADKMIDMGFE 329
>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 145 bits (366), Expect = 9e-35 Identities = 83/191 (43%), Positives = 113/191 (59%), Gaps = 12/191 (6%) Frame = +2 Query: 77 DITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIA 250 DI VE G +VP+PI F + ++ I S F +PTP+Q P+ GRD++ A Sbjct: 171 DIPVEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACA 230 Query: 251 ETGSGKTLSYILPGLVHV---GAQPRLEQGDG-------PIVLILAPTRELAVQIQAEAT 400 +TGSGKT ++ P L G P E P +L++APTREL QI E+ Sbjct: 231 QTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESK 290 Query: 401 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 580 KF S R+ +YGGA G Q+R++ RG ++++ATPGRL D+L+ G +L + YLVLD Sbjct: 291 KFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLD 350 Query: 581 EADRMLDMGFE 613 EADRMLDMGFE Sbjct: 351 EADRMLDMGFE 361
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 145 bits (365), Expect = 1e-34 Identities = 84/191 (43%), Positives = 112/191 (58%), Gaps = 12/191 (6%) Frame = +2 Query: 77 DITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIA 250 DI VE G VP+PI F ++ + S F +PTP+Q P+ GRD++ A Sbjct: 141 DIPVEASGEGVPEPITAFTAPPLDPLLVENVKLSRFTKPTPVQKYSVPIVAAGRDLMACA 200 Query: 251 ETGSGKTLSYILPGLV--HVGAQPRLEQGDG--------PIVLILAPTRELAVQIQAEAT 400 +TGSGKT ++ P L ++ + + G P L++APTREL QI EA Sbjct: 201 QTGSGKTGGFLFPVLSESYMNGPAEVPETAGAFSSHKVYPTALVMAPTRELVSQIFDEAK 260 Query: 401 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 580 KF S R + +YGGA G QIR+L RG ++++ATPGRL D+LE G +L + YLVLD Sbjct: 261 KFAYRSWVRPSVVYGGADIGGQIRNLERGCDLLVATPGRLKDLLERGRVSLASIKYLVLD 320 Query: 581 EADRMLDMGFE 613 EADRMLDMGFE Sbjct: 321 EADRMLDMGFE 331
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 145 bits (365), Expect = 1e-34 Identities = 81/192 (42%), Positives = 110/192 (57%), Gaps = 14/192 (7%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + V G+ VP+P+ F ++ + + + PTP+Q P+ GRD++ A+TG Sbjct: 148 VEVSGKGVPEPVTEFTNPPINPVLLENVKYARYATPTPVQKYSIPIVADGRDLMACAQTG 207 Query: 260 SGKTLSYILPGL----VHVGAQPRLEQGDG----------PIVLILAPTRELAVQIQAEA 397 SGKT ++ P L + + P +EQ G P L+LAPTREL QI EA Sbjct: 208 SGKTGGFLFPILSALFTYGPSTPPVEQDTGYGYRRTKKVYPTALVLAPTRELVSQIHEEA 267 Query: 398 TKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVL 577 KF S R +YGGA G Q+R L RG +++ ATPGRL+D++E G +L V YLVL Sbjct: 268 RKFAYRSWVRPAVVYGGADIGSQMRALDRGCDLLSATPGRLVDLIERGKISLANVKYLVL 327 Query: 578 DEADRMLDMGFE 613 DEADRMLDMGFE Sbjct: 328 DEADRMLDMGFE 339
>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 581 Score = 144 bits (363), Expect = 2e-34 Identities = 80/201 (39%), Positives = 129/201 (64%), Gaps = 6/201 (2%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 ++ M++ + +++ +IT +G+ +P P+R+++E + D + I++ G+ EPT +Q Sbjct: 139 LEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRAS 198 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGA----QPRLEQ-GDGPIVLILAPTREL 373 P+ALK RDV+G+AETGSGKTL++++P L ++ + + E+ + P+ LILAPTREL Sbjct: 199 IPLALKKRDVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLILAPTREL 258 Query: 374 AVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL-RRGVEIVIATPGRLIDMLEAGHTN 550 A+QI EA KF + I GG I + + GV +++ATPGRL+D +E + Sbjct: 259 ALQITKEAEKFCKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVD 318 Query: 551 LRRVTYLVLDEADRMLDMGFE 613 L + LV+DEADRM+DMGFE Sbjct: 319 LSKCYCLVMDEADRMIDMGFE 339
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 144 bits (362), Expect = 3e-34 Identities = 81/187 (43%), Positives = 107/187 (57%), Gaps = 9/187 (4%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + G +VP PI F + ++ I + F +PTP+Q P+ KGRD++ A+TG Sbjct: 134 VDASGEDVPDPITEFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTG 193 Query: 260 SGKTLSYILPGLVHVGAQPRLEQGDG---------PIVLILAPTRELAVQIQAEATKFGS 412 SGKT ++ P L + D P ++LAPTRELA QI EA KF Sbjct: 194 SGKTGGFLFPVLSQSFSNGPASTPDESGYYMRKAYPTAVVLAPTRELATQIFDEAKKFTY 253 Query: 413 YSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADR 592 S + +YGGA QIR+L RG ++++ATPGRL D+LE G +L V YLVLDEADR Sbjct: 254 RSWVKPCVVYGGADIRQQIRELERGCDLIVATPGRLNDLLERGKISLCSVKYLVLDEADR 313 Query: 593 MLDMGFE 613 MLDMGFE Sbjct: 314 MLDMGFE 320
>DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (VASA-like protein) Length = 722 Score = 143 bits (361), Expect = 3e-34 Identities = 79/181 (43%), Positives = 108/181 (59%), Gaps = 4/181 (2%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + V G + P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TG Sbjct: 274 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 333 Query: 260 SGKTLSYILPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTR 427 SGKT +++LP L H+ R ++ P +I+APTREL QI EA KF + R Sbjct: 334 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 393 Query: 428 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMG 607 + IYGG G IR + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDMG Sbjct: 394 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 453 Query: 608 F 610 F Sbjct: 454 F 454
>DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (rVLG) Length = 713 Score = 143 bits (361), Expect = 3e-34 Identities = 80/181 (44%), Positives = 108/181 (59%), Gaps = 4/181 (2%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + V G + P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TG Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 320 Query: 260 SGKTLSYILPGLVHVGAQ----PRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTR 427 SGKT +++LP L H+ R ++ P +I+APTREL QI EA KF + R Sbjct: 321 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 380 Query: 428 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMG 607 + IYGG G IR + +G I+ ATPGRL+D++ L++V YLVLDEADRMLDMG Sbjct: 381 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 440 Query: 608 F 610 F Sbjct: 441 F 441
>DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 724 Score = 143 bits (361), Expect = 3e-34 Identities = 79/181 (43%), Positives = 108/181 (59%), Gaps = 4/181 (2%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + V G + P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TG Sbjct: 276 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 335 Query: 260 SGKTLSYILPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTR 427 SGKT +++LP L H+ R ++ P +I+APTREL QI EA KF + R Sbjct: 336 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 395 Query: 428 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMG 607 + IYGG G IR + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDMG Sbjct: 396 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 455 Query: 608 F 610 F Sbjct: 456 F 456
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 143 bits (360), Expect = 4e-34 Identities = 84/191 (43%), Positives = 112/191 (58%), Gaps = 12/191 (6%) Frame = +2 Query: 77 DITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIA 250 DI VE G +VP+ I F ++ I + F +PTP+Q P+ KGRD++ A Sbjct: 130 DIPVEASGEDVPEAITEFTSPPLDSLLLENIKLARFTKPTPVQKYSVPIVSKGRDLMACA 189 Query: 251 ETGSGKTLSYILPGLVHVGAQPRLEQG--DG--------PIVLILAPTRELAVQIQAEAT 400 +TGSGKT ++ P L E+ DG P +++APTRELA QI EA Sbjct: 190 QTGSGKTGGFLFPVLSESFLTGPAEKAANDGYSYQRKAFPTAVVMAPTRELATQIFDEAK 249 Query: 401 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 580 KF S + +YGGAP G Q+R++ G ++++ATPGRL D+LE G +L V YLVLD Sbjct: 250 KFCYRSWVKPCVVYGGAPIGNQMREMDHGCDLLVATPGRLNDLLERGKVSLSNVKYLVLD 309 Query: 581 EADRMLDMGFE 613 EADRMLDMGFE Sbjct: 310 EADRMLDMGFE 320
>DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (Mvh) Length = 702 Score = 143 bits (360), Expect = 4e-34 Identities = 79/181 (43%), Positives = 108/181 (59%), Gaps = 4/181 (2%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + V G + P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TG Sbjct: 249 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 308 Query: 260 SGKTLSYILPGLVHVGAQ----PRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTR 427 SGKT +++LP L H+ R ++ P +I+APTREL QI EA KF + R Sbjct: 309 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 368 Query: 428 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMG 607 + IYGG G +R + +G I+ ATPGRL+D++ L++V YLVLDEADRMLDMG Sbjct: 369 AVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 428 Query: 608 F 610 F Sbjct: 429 F 429
>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) Length = 622 Score = 142 bits (359), Expect = 6e-34 Identities = 84/204 (41%), Positives = 115/204 (56%), Gaps = 9/204 (4%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 V +MSE + R+ I VEG +P PI+ F E FP ++ + K G + PTPIQ QG Sbjct: 152 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQG 211 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPR---LEQGDGPIVLILAPTRELA- 376 P L GRD+IGIA TGSGKTL + LP ++ Q + + +GP LI+ P+RELA Sbjct: 212 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELAR 271 Query: 377 -----VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAG 541 ++ + S R GG Q+ +R GV +++ATPGRL+D+L+ Sbjct: 272 QTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKK 331 Query: 542 HTNLRRVTYLVLDEADRMLDMGFE 613 +L YL LDEADRM+DMGFE Sbjct: 332 MVSLDICRYLALDEADRMIDMGFE 355
>DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 618 Score = 142 bits (358), Expect = 8e-34 Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 11/189 (5%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + G +VP+PI F ++ + I + + +PTP+Q P+ GRD++ A+TG Sbjct: 148 VEATGNDVPEPINAFTSPPLEEHLLTNIKLARYNKPTPVQKYSVPIVAAGRDLMACAQTG 207 Query: 260 SGKTLSYILPGLVHV---GAQP--------RLEQGDGPIVLILAPTRELAVQIQAEATKF 406 SGKT ++ P L G P + + P L+LAPTREL QI EA KF Sbjct: 208 SGKTGGFLFPVLSQSFFHGPSPTPQPTGPRHMHKKAYPTALVLAPTRELVSQIYDEAKKF 267 Query: 407 GSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEA 586 S R +YGGA G Q+R++ RG ++++A PGRL+D+++ G +L + YLVLDEA Sbjct: 268 AYRSWVRPCVVYGGADIGEQMRNIERGCDLLVAAPGRLVDLIDRGKVSLENIKYLVLDEA 327 Query: 587 DRMLDMGFE 613 DRMLDMGFE Sbjct: 328 DRMLDMGFE 336
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 141 bits (356), Expect = 1e-33 Identities = 84/194 (43%), Positives = 111/194 (57%), Gaps = 15/194 (7%) Frame = +2 Query: 77 DITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIA 250 DI VE GR+VP+P+ F + ++ I + + PTP+Q P+ GRD++G A Sbjct: 174 DIPVEATGRDVPEPVTTFTSPPIDAHLLENIKLARYTNPTPVQKYSIPIIKLGRDLMGCA 233 Query: 251 ETGSGKTLSYILP---GLVHVGAQP--RLEQGDG--------PIVLILAPTRELAVQIQA 391 +TGSGKT ++ P L G P E G P LILAPTREL QI Sbjct: 234 QTGSGKTGGFLFPILSALFTHGPPPPSAAEMAQGGYNRRKAYPSTLILAPTRELVSQIHD 293 Query: 392 EATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYL 571 EA KF S + +YGGA Q+R + RG +++ ATPGRL+D++E G +L V +L Sbjct: 294 EARKFTYRSWVKPAVVYGGADIVTQLRQIERGCDLLSATPGRLVDLMERGRISLSNVRFL 353 Query: 572 VLDEADRMLDMGFE 613 VLDEADRMLDMGFE Sbjct: 354 VLDEADRMLDMGFE 367
>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 675 Score = 141 bits (356), Expect = 1e-33 Identities = 80/198 (40%), Positives = 114/198 (57%), Gaps = 14/198 (7%) Frame = +2 Query: 62 YRQLRDITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 + + DI VE G +VP+P+ F ++ + I + + PTP+Q P+ GRD Sbjct: 166 FEKYDDIPVEASGTDVPEPVHQFTTPPLDEHLCRNIELAHYKVPTPVQKYSIPIVSGGRD 225 Query: 236 VIGIAETGSGKTLSYILPGL------------VHVGAQPRLEQGDGPIVLILAPTRELAV 379 ++ A+TGSGKT ++ P L + Q ++ P LILAPTREL Sbjct: 226 LMACAQTGSGKTGGFLFPILSQAFINGPSAVPANAAGQFGRQRKAYPTSLILAPTRELVS 285 Query: 380 QIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRR 559 QI E+ KF S R +YGGA G Q+R + RG ++++ATPGRL+D++E G +L+ Sbjct: 286 QIFDESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQN 345 Query: 560 VTYLVLDEADRMLDMGFE 613 + YLVLDEADRMLDMGFE Sbjct: 346 IKYLVLDEADRMLDMGFE 363
>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) (DEAD box protein abstrakt homolog) Length = 622 Score = 141 bits (355), Expect = 2e-33 Identities = 84/204 (41%), Positives = 114/204 (55%), Gaps = 9/204 (4%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQG 208 V +MSE + R+ I VEG +P PI+ F E FP ++ + K G PTPIQ QG Sbjct: 152 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQG 211 Query: 209 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPR---LEQGDGPIVLILAPTRELA- 376 P L GRD+IGIA TGSGKTL + LP ++ Q + + +GP LI+ P+RELA Sbjct: 212 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELAR 271 Query: 377 -----VQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAG 541 ++ + S R GG Q+ +R GV +++ATPGRL+D+L+ Sbjct: 272 QTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKK 331 Query: 542 HTNLRRVTYLVLDEADRMLDMGFE 613 +L YL LDEADRM+DMGFE Sbjct: 332 MVSLDICRYLALDEADRMIDMGFE 355
>DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 725 Score = 140 bits (353), Expect = 3e-33 Identities = 78/181 (43%), Positives = 107/181 (59%), Gaps = 4/181 (2%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + V G + P I F EAN IAK+G+ + TP+Q P+ L GRD++ A+TG Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336 Query: 260 SGKTLSYILPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTR 427 SGKT +++LP L H+ ++ P +I+APTREL QI EA KF + R Sbjct: 337 SGKTAAFLLPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 396 Query: 428 STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMG 607 + IYGG G IR + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDMG Sbjct: 397 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 456 Query: 608 F 610 F Sbjct: 457 F 457
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 140 bits (353), Expect = 3e-33 Identities = 82/191 (42%), Positives = 107/191 (56%), Gaps = 12/191 (6%) Frame = +2 Query: 77 DITVE--GREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIA 250 DI VE G +VP+PI FH + I + F +PTP+Q P+ GRD++ A Sbjct: 144 DIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACA 203 Query: 251 ETGSGKTLSYILPGLVHVGAQPRLEQGDG----------PIVLILAPTRELAVQIQAEAT 400 +TGSGKT ++ P L + + P +ILAPTRELA QI EA Sbjct: 204 QTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAK 263 Query: 401 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLD 580 KF S + +YGGA QI+ +R G +++ATPGRL D+LE + +L V YLVLD Sbjct: 264 KFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLVLD 323 Query: 581 EADRMLDMGFE 613 EADRMLDMGFE Sbjct: 324 EADRMLDMGFE 334
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 140 bits (352), Expect = 4e-33 Identities = 83/206 (40%), Positives = 113/206 (54%), Gaps = 7/206 (3%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKP-------IRFFHEANFPDYCMQAIAKSG 175 + PA+ + +TE+ ++ I + KP F +N Y G Sbjct: 37 QSPALDNVPQTEIDKFLSDHSIKITDASADKPSLRPIISFSFLPPSNKDLYA----PLDG 92 Query: 176 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLIL 355 F PT IQ+ WP+ GRDVIGIAETGSGKTL++ LP L V ++ P+ +++ Sbjct: 93 FASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVI 152 Query: 356 APTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 535 +PTRELA+QI + KF + CI+GG K Q R+ + +V+ATPGRL D+ Sbjct: 153 SPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ-REALKSAAVVVATPGRLKDLQN 211 Query: 536 AGHTNLRRVTYLVLDEADRMLDMGFE 613 G +L RV YLVLDEADRMLD GFE Sbjct: 212 DGSLDLGRVKYLVLDEADRMLDKGFE 237
>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 585 Score = 139 bits (351), Expect = 5e-33 Identities = 76/162 (46%), Positives = 100/162 (61%), Gaps = 9/162 (5%) Frame = +2 Query: 155 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL---- 322 + + GF PTPIQA WP+ L+ +DV+GIAETGSGKT ++ LP L H+ + ++ Sbjct: 172 KTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSG 231 Query: 323 ---EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRG-- 487 +G VL++APTRELA+Q + K G C+YGG K Q+R L + Sbjct: 232 KKKAKGAQVNVLVIAPTRELAIQTEENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQSPP 291 Query: 488 VEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 V IV+ TPGR++DM G +L VTYLVLDEADRMLD GFE Sbjct: 292 VRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDKGFE 333
>DBP3_YEAST (P20447) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) (DEAD box| protein 3) (Helicase CA3) Length = 523 Score = 139 bits (351), Expect = 5e-33 Identities = 79/202 (39%), Positives = 120/202 (59%), Gaps = 2/202 (0%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGRE--VPKPIRFFHEANFPDYCMQAIAKSGFVEP 187 V+ A+ ++ ++++ +Y + +I VE +P+ F + I+K F +P Sbjct: 78 VQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FPKP 135 Query: 188 TPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTR 367 TPIQA WP L G+DV+G+AETGSGKT ++ +P + H+ + G VL+++PTR Sbjct: 136 TPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTR 192 Query: 368 ELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHT 547 ELA QI + C+YGG PK Q L++ ++V+ATPGRL+D+L+ G Sbjct: 193 ELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSV 251 Query: 548 NLRRVTYLVLDEADRMLDMGFE 613 +L +V YLVLDEADRML+ GFE Sbjct: 252 DLSQVNYLVLDEADRMLEKGFE 273
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 139 bits (349), Expect = 8e-33 Identities = 76/177 (42%), Positives = 106/177 (59%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + V G +VP+PI+ F A+ D + + KSG+ PTPIQ P+ GRD++ A+TG Sbjct: 233 VKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTG 292 Query: 260 SGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCI 439 SGKT +++LP L + P + P V+I++PTRELA+QI EA KF S + + Sbjct: 293 SGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIV 352 Query: 440 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 YGG Q + RG +VIATPGRL+D ++ ++VLDEADRMLDMGF Sbjct: 353 YGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGF 409
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 138 bits (348), Expect = 1e-32 Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 1/154 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++A+A+ G+ EPTPIQ Q P L+GRD++ A+TG+GKT + LP L H+ + +G Sbjct: 13 LRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKG 72 Query: 332 DGPI-VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 P+ LIL PTRELA QI + Y RS ++GG PQ+ LR GV++++AT Sbjct: 73 RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVAT 132 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 PGRL+D+ L +V LVLDEADRMLDMGF Sbjct: 133 PGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGF 166
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 137 bits (344), Expect = 3e-32 Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 2/201 (0%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVP--KPIRFFHEANFPDYCMQAIAKSGFVEPT 190 + PA+ + ++E+ + Q ++TVE +P+ F + + I+K F PT Sbjct: 84 QSPALTKLPQSEIDSFLQENEVTVEDPHNLGLRPLLGFDQIDLDSRIASVISK--FPTPT 141 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRE 370 PIQA WP L G+DVIG+AETGSGKT ++ +P + ++ + G VL ++PTRE Sbjct: 142 PIQAVSWPYLLSGKDVIGVAETGSGKTFAFGVPAINNILTHDK----KGLKVLCISPTRE 197 Query: 371 LAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTN 550 LA+QI + + + +YGG K Q+ LR +V+ATPGRLID+L G + Sbjct: 198 LALQIYDNLVDLTANTPLKCVAVYGGVSKHEQVSSLRNA-SVVVATPGRLIDLLNDGALS 256 Query: 551 LRRVTYLVLDEADRMLDMGFE 613 L + YLVLDEADRML+ GFE Sbjct: 257 LDSIEYLVLDEADRMLEKGFE 277
>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 636 Score = 136 bits (343), Expect = 4e-32 Identities = 77/194 (39%), Positives = 109/194 (56%), Gaps = 16/194 (8%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + V G ++ +P+ F + +Q I SG+ +PTP+Q P+ GRD++ A+TG Sbjct: 158 VEVSGGDI-EPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTG 216 Query: 260 SGKTLSYILPGL----------------VHVGAQPRLEQGDGPIVLILAPTRELAVQIQA 391 SGKT ++ P L +G +PR P LILAPTREL QI Sbjct: 217 SGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAY---PTTLILAPTRELVCQIHE 273 Query: 392 EATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYL 571 E+ KF S R +YGGA QIR + +G +++ ATPGRL+D+++ G +L + +L Sbjct: 274 ESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFL 333 Query: 572 VLDEADRMLDMGFE 613 VLDEADRMLDMGFE Sbjct: 334 VLDEADRMLDMGFE 347
>DBP3_CRYNE (Q5KHB7) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 605 Score = 136 bits (342), Expect = 5e-32 Identities = 73/155 (47%), Positives = 101/155 (65%), Gaps = 9/155 (5%) Frame = +2 Query: 176 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL---EQGDGPI- 343 F +PTPIQA WP L +DV+GIAETGSGKTL++ +PG+ + P + ++G G + Sbjct: 193 FEKPTPIQACSWPALLSKKDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVP 252 Query: 344 ----VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL-RRGVEIVIAT 508 +L+LAPTRELA Q + FG +S CI+GG K Q R+L ++ +V+ T Sbjct: 253 GQIQMLVLAPTRELAQQSHEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGT 312 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 PGR +D+ ++G +L V+YLVLDEADRMLD GFE Sbjct: 313 PGRTLDLADSGELDLSSVSYLVLDEADRMLDAGFE 347
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 134 bits (338), Expect = 2e-31 Identities = 84/205 (40%), Positives = 116/205 (56%), Gaps = 5/205 (2%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITV---EGREVPKPI-RFFHEANFPDYCMQAIAKSGFV 181 V+ PA+ + ++E+ ++ I + V +PI F H D + S F Sbjct: 44 VQSPALGDVPQSEIEKFLTENSIKITDTSSENVMRPIISFSHLPPCKDDLYAPL--SSFK 101 Query: 182 EPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIVLILA 358 PT IQ+ WP+ GRDVIGIAETGSGKTL++ LP L + +Q P+ +I++ Sbjct: 102 SPTSIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKIQDSAMTKQKPYRPLAVIIS 161 Query: 359 PTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEA 538 PTRELA+QI + KF R C++GG K Q R+ + +V+ATPGRL D+ Sbjct: 162 PTRELAMQIYDQLLKFSGSVGVRVACVFGGVRKEEQ-REALKTAGVVVATPGRLKDLQND 220 Query: 539 GHTNLRRVTYLVLDEADRMLDMGFE 613 G +L +V YLVLDEADRMLD GFE Sbjct: 221 GSVDLGKVKYLVLDEADRMLDKGFE 245
>DBP3_CANAL (Q5APT8) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 564 Score = 134 bits (337), Expect = 2e-31 Identities = 76/197 (38%), Positives = 116/197 (58%), Gaps = 2/197 (1%) Frame = +2 Query: 29 VQAMSETEVAQYRQLRDITVEGREVP--KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQA 202 + ++S++++ ++ +ITVE +PI F + ++K F +PTPIQ+ Sbjct: 124 LSSVSQSDIDKFLSDNEITVEDPSSSSLRPILSFDQVQLTSAITSKLSK--FDKPTPIQS 181 Query: 203 QGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQ 382 WP L G+DVIG+AETGSGKT ++ +P + ++ + VL ++PTRELA+Q Sbjct: 182 VSWPFLLSGKDVIGVAETGSGKTFAFGVPAINNIITTGNTKTLS---VLCISPTRELALQ 238 Query: 383 IQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRV 562 I + + S +YGG K QIR ++ +V+ATPGRL+D++ G NL +V Sbjct: 239 IYDNLIELTADSGVNCVAVYGGVSKDDQIRKIKTA-NVVVATPGRLVDLINDGAINLGKV 297 Query: 563 TYLVLDEADRMLDMGFE 613 YLVLDEADRML+ GFE Sbjct: 298 NYLVLDEADRMLEKGFE 314
>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 535 Score = 134 bits (336), Expect = 3e-31 Identities = 78/202 (38%), Positives = 115/202 (56%), Gaps = 2/202 (0%) Frame = +2 Query: 14 VECPAVQAMSETEVAQYRQLRDITVEGREVP--KPIRFFHEANFPDYCMQAIAKSGFVEP 187 VE + ++ + +V + ++ VE E +P+ F N + I+K F +P Sbjct: 89 VESKELASVPQADVDTFFSENEVAVEDPESLGFRPLLSFSHLNLHSAIQKEISK--FPKP 146 Query: 188 TPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTR 367 TPIQA WP L G+DVIG+AETGSGKT ++ +P + + ++ +G L+++PTR Sbjct: 147 TPIQAVSWPYLLAGKDVIGVAETGSGKTFAFGVPAINSLMSEKSTPRGVK--CLVISPTR 204 Query: 368 ELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHT 547 ELA QI + C+YGG K Q L++ ++V+ATPGRL+D++E G Sbjct: 205 ELASQIYDNLVQLTDKVGLNCCCVYGGVQKDSQREQLKKA-QVVVATPGRLLDLIEEGSA 263 Query: 548 NLRRVTYLVLDEADRMLDMGFE 613 L V YLVLDEADRML+ GFE Sbjct: 264 KLAGVQYLVLDEADRMLEKGFE 285
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 133 bits (335), Expect = 4e-31 Identities = 80/209 (38%), Positives = 121/209 (57%), Gaps = 11/209 (5%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFV---EP 187 + A+ A+ E+E+ + + ++I ++ + + P I+K+ F P Sbjct: 145 QADALSALPESEIETFLKEKEIVIKDPSSSNLRPIMNFSQLPQ--SNLISKNPFAAYTNP 202 Query: 188 TPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPR-----LEQGDGPIVLI 352 TPIQ+ WP +L GRDVIGIAETGSGKT+++ LP + + ++P+ ++ P +I Sbjct: 203 TPIQSASWPFSLSGRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVI 262 Query: 353 LAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL---RRGVEIVIATPGRLI 523 ++PTRELA+Q A + S + CI+GG+ K Q R+L GV+I+ ATPGRL Sbjct: 263 VSPTRELAMQTHAALSGLASLVGLSAVCIFGGSDKNEQ-RNLLYKNNGVDIITATPGRLK 321 Query: 524 DMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 D L G +L V++ VLDEADRMLD GF Sbjct: 322 DFLSEGSISLANVSFAVLDEADRMLDRGF 350
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 132 bits (333), Expect = 6e-31 Identities = 72/163 (44%), Positives = 102/163 (62%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F+E N + I K+GFVE +PIQ Q P+AL+G+DVIG A+TG+GKT ++ LP L Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + Q L++APTRELAVQ Q E +FG + +YGG+ QI+ L+ Sbjct: 63 IRTEEATIQA-----LVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALK 117 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 G IV+ TPGRL+D+++ L+ + L+LDEAD ML+MGF Sbjct: 118 SGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGF 160
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 132 bits (333), Expect = 6e-31 Identities = 72/163 (44%), Positives = 102/163 (62%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F+E N + I K+GFVE +PIQ Q P+AL+G+DVIG A+TG+GKT ++ LP L Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + Q L++APTRELAVQ Q E +FG + +YGG+ QI+ L+ Sbjct: 63 IRTEEATIQA-----LVIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALK 117 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 G IV+ TPGRL+D+++ L+ + L+LDEAD ML+MGF Sbjct: 118 SGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGF 160
>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 578 Score = 132 bits (333), Expect = 6e-31 Identities = 68/146 (46%), Positives = 93/146 (63%) Frame = +2 Query: 176 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLIL 355 + EPTPIQA WP L GRDV+GIAETGSGKT+++ +P L ++ + P VL++ Sbjct: 185 YKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQYLNGLS--DNKSVPRVLVV 242 Query: 356 APTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 535 +PTRELA+Q + ++ +YGGAPK Q R + ++I TPGRL+D++ Sbjct: 243 SPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQAR-AAKNASVIIGTPGRLLDLIN 301 Query: 536 AGHTNLRRVTYLVLDEADRMLDMGFE 613 G + +V YLVLDEADRMLD GFE Sbjct: 302 DGSIDCSQVGYLVLDEADRMLDTGFE 327
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 132 bits (332), Expect = 8e-31 Identities = 85/198 (42%), Positives = 107/198 (54%), Gaps = 2/198 (1%) Frame = +2 Query: 23 PAVQAMSETEVAQYR-QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQ 199 P + SE E R +D T E P P + F E D +A G+ PTPIQ Sbjct: 14 PETNSDSEAESVSSRGSAKDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQ 73 Query: 200 AQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAV 379 +Q P+AL+GRDVIG+AETGSGKT ++ LP L + P+ G L+LAPTRELA Sbjct: 74 SQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALMEAPQTLFG-----LVLAPTRELAY 128 Query: 380 QIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLR 556 QI GS R I GG Q L + I++ATPGRL+D LE +LR Sbjct: 129 QISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLR 188 Query: 557 RVTYLVLDEADRMLDMGF 610 + YL +DEADR+LDM F Sbjct: 189 NLKYLAIDEADRLLDMDF 206
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 132 bits (332), Expect = 8e-31 Identities = 66/148 (44%), Positives = 91/148 (61%) Frame = +2 Query: 170 SGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVL 349 + + PTPIQ+ WP L GRDVIG+AETGSGKT+++ LP + + A + Sbjct: 179 ANYKAPTPIQSASWPFTLSGRDVIGVAETGSGKTMAFALPCVEAISALKHKHTK----AV 234 Query: 350 ILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 529 +++PTRELA+Q + + +R + C+YGGA K Q L RG +I++ATPGRL D Sbjct: 235 VVSPTRELAMQTYEQMASVAALNRMKCVCLYGGASKDDQRNLLNRGADIIVATPGRLKDF 294 Query: 530 LEAGHTNLRRVTYLVLDEADRMLDMGFE 613 + G +L + VLDEADRMLD GFE Sbjct: 295 MSDGTVDLSHSAFAVLDEADRMLDKGFE 322
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 130 bits (328), Expect = 2e-30 Identities = 66/164 (40%), Positives = 102/164 (62%), Gaps = 1/164 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F++ P++ ++A++ GF P+PIQ P L G DV+G+A+TGSGKT ++ LP L Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQ 66 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDL 478 + + P +L++APTRELA+Q+ F Y++ TR +YGG Q+R L Sbjct: 67 IDPSEK-----HPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRAL 121 Query: 479 RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++G ++V+ TPGR++D + G NL + ++VLDEAD ML MGF Sbjct: 122 KQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGF 165
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 130 bits (328), Expect = 2e-30 Identities = 71/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ + R Sbjct: 17 LEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLLNNIDPELR---- 72 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 P +L+LAPTRELAVQ+ T+F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 130 bits (327), Expect = 3e-30 Identities = 83/191 (43%), Positives = 107/191 (56%), Gaps = 2/191 (1%) Frame = +2 Query: 44 ETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMAL 223 E E +Q +D VE E F + N +QA F +PTPIQA+ P AL Sbjct: 49 EVERPAKKQAKDEKVEEPEEEVTFESFAQLNLVPELIQACQNLNFTKPTPIQARAIPPAL 108 Query: 224 KGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPI-VLILAPTRELAVQIQAEAT 400 G DVIG+A+TGSGKT ++ +P L +L + P +LAPTRELA QI+ Sbjct: 109 AGSDVIGLAQTGSGKTAAFAIPIL------NKLWEDQQPYYACVLAPTRELAQQIKETFD 162 Query: 401 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVL 577 GS R+TCI GG Q RDL R I+IATPGRL+D LE +L+ + +LV+ Sbjct: 163 SLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLKNLKFLVM 222 Query: 578 DEADRMLDMGF 610 DEADR+LDM F Sbjct: 223 DEADRLLDMEF 233
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 129 bits (324), Expect = 7e-30 Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 3/172 (1%) Frame = +2 Query: 107 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 286 +P+ F++ + IAK F +PTPIQA WP L G+DVIG+AETGSGKT ++ + Sbjct: 127 RPLLAFNQISLDKEVQNEIAK--FPKPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGV 184 Query: 287 PGLVHV---GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPK 457 P + ++ ++P+ G VL+++PTRELA QI +YGG PK Sbjct: 185 PAINNLLTSSSKPK-----GIKVLVISPTRELASQIYDNLVLLTQKVGIDCCVVYGGVPK 239 Query: 458 GPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 Q R + + +V+ATPGRL+D++E G +L V Y+VLDEADRML+ GFE Sbjct: 240 DDQRRQIAKS-NVVVATPGRLLDLIEEGSVDLSPVDYMVLDEADRMLEKGFE 290
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 129 bits (323), Expect = 9e-30 Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Frame = +2 Query: 8 EDVECPAVQAMSETEVAQYRQLRDI--TVEGREVPKPIRFFHEANFPDYCMQAIAKSGFV 181 E ++ A++ ++ E A+ + + TV + F+E ++AI + F Sbjct: 27 EKIKKNALKQQAQEEPAKEENVAENFDTVVDPTAELKFKSFNELKLIPELLEAIQQMKFT 86 Query: 182 EPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAP 361 +PTPIQ++ P AL+G+D+IG+A+TGSGKT ++ +P L + G L+LAP Sbjct: 87 KPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQALWEAQAAYYG-----LVLAP 141 Query: 362 TRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAG 541 TRELA QI+ GS RS CI GG Q RDL R I++ATPGR++D LE Sbjct: 142 TRELAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLE-- 199 Query: 542 HT---NLRRVTYLVLDEADRMLDMGF 610 HT +L+ + YLV+DEADR+LDM F Sbjct: 200 HTKGFSLKNLKYLVMDEADRLLDMDF 225
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 129 bits (323), Expect = 9e-30 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ P L+ Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL--DPELK-- 72 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 P +L+LAPTRELAVQ+ T F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 129 bits (323), Expect = 9e-30 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ P L+ Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL--DPELK-- 72 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 P +L+LAPTRELAVQ+ T F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 129 bits (323), Expect = 9e-30 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ P L+ Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL--DPELK-- 72 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 P +L+LAPTRELAVQ+ T F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 129 bits (323), Expect = 9e-30 Identities = 72/154 (46%), Positives = 102/154 (66%), Gaps = 1/154 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++A+ G+ +P+PIQA+ P L GRDV+G+A+TGSGKT ++ LP L ++ P L+ Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNL--DPELK-- 72 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSR-TRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 P +L+LAPTRELAVQ+ T F + R +YGG Q+R LR+G +IV+ T Sbjct: 73 -APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 131 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 PGRL+D L+ G +L +++ LVLDEAD ML MGF Sbjct: 132 PGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGF 165
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 128 bits (322), Expect = 1e-29 Identities = 71/156 (45%), Positives = 102/156 (65%), Gaps = 1/156 (0%) Frame = +2 Query: 146 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 325 + +++++K G+V+P+PIQA P+ L+GRDV+G+A+TGSGKT ++ LP L ++ + Sbjct: 16 FIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLK-- 73 Query: 326 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTC-IYGGAPKGPQIRDLRRGVEIVI 502 P +L+LAPTRELAVQ+ + F Y +YGG Q+R LR+G +IV+ Sbjct: 74 ---APQILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRYEVQLRALRQGPQIVV 130 Query: 503 ATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 TPGRL+D L+ G NL + LVLDEAD ML MGF Sbjct: 131 GTPGRLLDHLKRGTLNLSNLYALVLDEADEMLRMGF 166
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 127 bits (320), Expect = 2e-29 Identities = 78/165 (47%), Positives = 99/165 (60%), Gaps = 2/165 (1%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E N +QA + +PTPIQ++ P AL+G D+IG+A+TGSGKT ++ +P L Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPIL-- 140 Query: 302 VGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 478 RL P ILAPTRELA QI+ GS RSTCI GG Q RDL Sbjct: 141 ----NRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDL 196 Query: 479 RRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 610 R I+IATPGRL+D LE +LR++ +LV+DEADR+LDM F Sbjct: 197 MRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEF 241
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 127 bits (319), Expect = 3e-29 Identities = 78/166 (46%), Positives = 99/166 (59%), Gaps = 3/166 (1%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E + ++A + +PTPIQ++ P ALKG D+IG+A+TGSGKT ++ +P L Sbjct: 69 FTELDLVPELIEACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQ 128 Query: 302 V--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 475 + QP ILAPTRELA QI+ GS RSTCI GG Q RD Sbjct: 129 LWHDQQPYY-------ACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARD 181 Query: 476 LRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 610 L R I+IATPGRL+D LE NLR++ YLV+DEADR+LDM F Sbjct: 182 LMRKPHIIIATPGRLMDHLENTKGFNLRKLKYLVMDEADRLLDMEF 227
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 127 bits (318), Expect = 3e-29 Identities = 83/197 (42%), Positives = 108/197 (54%), Gaps = 1/197 (0%) Frame = +2 Query: 23 PAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQA 202 P+ SE E A L + + E V P + F + D +A K + PTPIQ Sbjct: 32 PSSDEESEEESAT---LEEPSAEETAVDAPKKTFKDLGVNDALCEACEKLNYKYPTPIQE 88 Query: 203 QGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQ 382 + P+AL+GRD+IG+AETGSGKT ++ LP L Q L++ L+LAPTRELA Q Sbjct: 89 KSIPVALQGRDIIGLAETGSGKTAAFALPVL-----QALLDKPQPLFGLVLAPTRELATQ 143 Query: 383 IQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRR 559 I GS R I GG PQ L + IV+ATPGRL+D LE +LR Sbjct: 144 IGQAFEALGSLISLRCAVIVGGLDMVPQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRT 203 Query: 560 VTYLVLDEADRMLDMGF 610 + YL++DEADR+LDM F Sbjct: 204 LKYLIMDEADRLLDMDF 220
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 127 bits (318), Expect = 3e-29 Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 1/156 (0%) Frame = +2 Query: 146 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 325 + +Q++ + G+V+P+PIQA P+ L+GRDV+G+A+TGSGKT ++ LP L ++ + Sbjct: 16 FIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLK-- 73 Query: 326 QGDGPIVLILAPTRELAVQIQAEATKFGSYS-RTRSTCIYGGAPKGPQIRDLRRGVEIVI 502 P +L+LAPTRELAVQ+ + F Y +YGG Q+R LR+G +IV+ Sbjct: 74 ---APQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLRALRQGPQIVV 130 Query: 503 ATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 TPGRL+D L+ G NL + LVLDEAD ML MGF Sbjct: 131 GTPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMGF 166
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 126 bits (316), Expect = 6e-29 Identities = 81/205 (39%), Positives = 110/205 (53%), Gaps = 2/205 (0%) Frame = +2 Query: 2 RHEDVECPAVQAMSETEVAQYRQLR-DITVEGREVPKPIRFFHEANFPDYCMQAIAKSGF 178 + +D PA ++ T + + D+ E EV + F + D +A + G+ Sbjct: 51 KKQDAPEPAEESTPATNSTEEDSVTLDVAPEQEEVETVKKTFKDLGIVDALCEACERLGY 110 Query: 179 VEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILA 358 PTPIQ Q P+AL+ RD+IGIAETGSGKT ++ LP L Q L++ L+LA Sbjct: 111 KNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPIL-----QALLDKPAPLFALVLA 165 Query: 359 PTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE- 535 PTRELA QI GS R I GG Q L + +++ATPGRL+D LE Sbjct: 166 PTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRLLDHLEK 225 Query: 536 AGHTNLRRVTYLVLDEADRMLDMGF 610 +LR + YLV+DEADR+LDM F Sbjct: 226 TKGFSLRSMQYLVMDEADRLLDMDF 250
>RHLB_XYLFA (Q9PA24) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 126 bits (316), Expect = 6e-29 Identities = 73/156 (46%), Positives = 98/156 (62%), Gaps = 3/156 (1%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--E 325 + + ++GF TPIQA P+AL GRD+ G A+TG+GKTL++++ + + ++P L Sbjct: 21 LTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNR 80 Query: 326 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 505 + P LILAPTRELA+QI +A KFG R IYGG Q LR+G ++VIA Sbjct: 81 NPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIA 140 Query: 506 TPGRLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 610 TPGRLID L+ +LR VLDEADRM D+GF Sbjct: 141 TPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGF 176
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 126 bits (316), Expect = 6e-29 Identities = 84/206 (40%), Positives = 109/206 (52%), Gaps = 3/206 (1%) Frame = +2 Query: 2 RHEDVECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFV 181 R E SETE A + E E + F E + ++A F Sbjct: 35 REESQATEEANTASETEAA-------VIEETAEPEEGFSSFRELDLVPELIEACDNLNFT 87 Query: 182 EPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPI-VLILA 358 +PTPIQ++ P AL+G+D+IG+A+TGSGKT ++ +P L RL P ILA Sbjct: 88 KPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPIL------NRLWHDQQPYYACILA 141 Query: 359 PTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEA 538 PTRELA QI+ GS R+TCI GG Q RDL R I+IATPGRL+D LE Sbjct: 142 PTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLEV 201 Query: 539 GHTN--LRRVTYLVLDEADRMLDMGF 610 LR+ +LV+DEADR+L+M F Sbjct: 202 HKRGFALRKQQFLVMDEADRLLNMKF 227
>RHLB_XYLFT (Q879Y6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 125 bits (314), Expect = 1e-28 Identities = 73/156 (46%), Positives = 97/156 (62%), Gaps = 3/156 (1%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--E 325 + + ++GF TPIQA P+AL GRD+ G A+TG+GKTL++++ + + + P L Sbjct: 21 LTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSSPGLVNR 80 Query: 326 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 505 + P LILAPTRELA+QI +A KFG R IYGG Q LR+G ++VIA Sbjct: 81 NPEDPRALILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDRQREMLRKGADVVIA 140 Query: 506 TPGRLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 610 TPGRLID L+ +LR VLDEADRM D+GF Sbjct: 141 TPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGF 176
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 125 bits (314), Expect = 1e-28 Identities = 78/186 (41%), Positives = 108/186 (58%), Gaps = 7/186 (3%) Frame = +2 Query: 77 DITVEGREVPKPIRFFHEANF-PDYCMQAIAKS-GFVEPTPIQAQGWPMALKGRDVIGIA 250 +I+ +G V KP+R +HE P+ + I + EPT IQ P + RD IG+A Sbjct: 123 NISSKGGTVEKPLRNWHELKLIPEDLLNIITNDLHYNEPTSIQRSTIPNVINNRDFIGVA 182 Query: 251 ETGSGKTLSYILPGLVHVGAQPRLE---QGDGPIVLILAPTRELAVQIQAEATKFGSYSR 421 TGSGKTL+++LP L+ + P L + DGP+ L+LAPTRELA QIQ E + Sbjct: 183 STGSGKTLAFLLPILIKLHGIPPLNSITKHDGPLALVLAPTRELAQQIQHEGQSITKLWK 242 Query: 422 T--RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRM 595 I GG +LR G +I++ATPGRL+D L++ L++V LVLDEAD+M Sbjct: 243 RPCNIVSIVGGHSLEEISANLRDGCDILVATPGRLLDCLDSHLLFLKQVNTLVLDEADKM 302 Query: 596 LDMGFE 613 +D GFE Sbjct: 303 IDFGFE 308
>RHLB_PHOLL (Q7MYL2) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 125 bits (314), Expect = 1e-28 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ GF TPIQA P ++GRDV G A+TG+GKTL+++ Sbjct: 8 EKKFSDFALHPKVIEALDNKGFSNCTPIQALTLPFTVEGRDVAGQAQTGTGKTLAFLASA 67 Query: 293 LVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ P E Q + P LI+APTRELAVQI ++A + + YGG Q Sbjct: 68 FHYLLTHPAAEERQTNQPRALIMAPTRELAVQIYSDAEDLAQATGLKMGLAYGGDGYDKQ 127 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + GH NL V +VLDEADRM D+GF Sbjct: 128 LKILESGVDILIGTTGRLIDYTKQGHINLNAVQVVVLDEADRMYDLGF 175
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 125 bits (313), Expect = 1e-28 Identities = 79/175 (45%), Positives = 98/175 (56%), Gaps = 1/175 (0%) Frame = +2 Query: 89 EGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 268 E R PK F + D +A G+ PTPIQA+ P+AL+GRD+IG+AETGSGK Sbjct: 46 ESRPAPKS---FKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGK 102 Query: 269 TLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGG 448 T ++ LP L Q +E LILAPTRELA QI GS R I GG Sbjct: 103 TAAFALPIL-----QALMENPQSFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGG 157 Query: 449 APKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 610 Q L + I++ATPGRL+D LE +LR + YLV+DEADR+LDM F Sbjct: 158 MDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDF 212
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 125 bits (313), Expect = 1e-28 Identities = 67/154 (43%), Positives = 96/154 (62%), Gaps = 1/154 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++AI G+ PT IQA P + G DV+G+A+TG+GKT ++ +P L + ++ Q Sbjct: 25 LRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQA 84 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSY-SRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 L+L PTRELA+Q+ ++G+Y S+ IYGG+ Q+ LRRG ++V+ T Sbjct: 85 -----LVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGT 139 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 PGR+ID LE +L RV +LVLDEAD ML MGF Sbjct: 140 PGRMIDHLERATLDLSRVDFLVLDEADEMLTMGF 173
>RHLB_SALTY (P0A2P0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 124 bits (312), Expect = 2e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 293 LVHVGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ + P ++ + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYGGDGYDKQ 126 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RHLB_SALTI (P0A2P1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 124 bits (312), Expect = 2e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 293 LVHVGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ + P ++ + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYGGDGYDKQ 126 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)| Length = 444 Score = 123 bits (309), Expect = 4e-28 Identities = 69/163 (42%), Positives = 93/163 (57%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E + ++A+ GF PT IQA P AL GRDV+G A TG+GKT +Y+LP L H Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + PR + G P +LIL PTRELA+Q+ A + ++ I GG Sbjct: 66 LLDFPRKKSGP-PRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFS 124 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 +IV+AT GRL+ ++ + + R V L+LDEADRMLDMGF Sbjct: 125 ENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGF 167
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 123 bits (309), Expect = 4e-28 Identities = 71/150 (47%), Positives = 96/150 (64%), Gaps = 5/150 (3%) Frame = +2 Query: 176 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVL 349 F +PTPIQ++ P AL+G+D+IG+A+TGSGKT ++ +P L + QP L Sbjct: 3 FTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPYF-------AL 55 Query: 350 ILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 529 +LAPTRELA QI+ GS RS+CI GG Q RDL R +++ATPGR++D Sbjct: 56 VLAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDH 115 Query: 530 LEAGHT---NLRRVTYLVLDEADRMLDMGF 610 LE HT +L+ + YLV+DEADR+LDM F Sbjct: 116 LE--HTKGFSLKNLKYLVMDEADRLLDMDF 143
>RHLB_SHIFL (P0A8K0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 123 bits (308), Expect = 5e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 293 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ + P + + + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 126 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RHLB_ECOLI (P0A8J8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 123 bits (308), Expect = 5e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 293 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ + P + + + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 126 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RHLB_ECOL6 (P0A8J9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 123 bits (308), Expect = 5e-28 Identities = 70/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 293 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ + P + + + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 126 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 122 bits (306), Expect = 8e-28 Identities = 84/208 (40%), Positives = 117/208 (56%), Gaps = 16/208 (7%) Frame = +2 Query: 38 MSETEVAQYRQLRDITVEGREVPK-PIRFFHEAN-FPDYCMQAIAKS-GFVEPTPIQAQG 208 M E + R+ +IT +G+ K P+R + E N P ++A+ + GF EPT IQ Sbjct: 142 MDERDWRIMREEFNITSKGKGAVKHPLRNWSETNVIPTDLVRALTEGMGFDEPTAIQRIT 201 Query: 209 WPMALKG-----RDVIGIAETGSGKTLSYILPGLVHVGAQP----RLEQGDGPIVLILAP 361 P A+ RD++GIA TGSGKTL++ +P L + A P L+ DGP+ L+L P Sbjct: 202 IPNAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVP 261 Query: 362 TRELAVQIQAEATKFGSYSRTR----STCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 529 TRELA QI E + S + + I GG LR G +I+IATPGRL+D+ Sbjct: 262 TRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDV 321 Query: 530 LEAGHTNLRRVTYLVLDEADRMLDMGFE 613 L+ L ++ LVLDEADRM+D+GFE Sbjct: 322 LDNHLVVLNKIQSLVLDEADRMIDLGFE 349
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 122 bits (305), Expect = 1e-27 Identities = 77/176 (43%), Positives = 101/176 (57%), Gaps = 2/176 (1%) Frame = +2 Query: 89 EGREVPKPI-RFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSG 265 E E PK + F E + +A G+ PT IQA+ P+AL+GRD+IG+AETGSG Sbjct: 42 EPSEAPKQAPKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSG 101 Query: 266 KTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYG 445 KT ++ LP L Q +++ L+LAPTRELA QI GS RST + G Sbjct: 102 KTAAFALPIL-----QALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVG 156 Query: 446 GAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 610 G Q L + I++ATPGRL+D LE +LR + YLV+DEADR+LDM F Sbjct: 157 GMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDF 212
>RHLB_ECO57 (Q8XAT4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 121 bits (303), Expect = 2e-27 Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ K GF TPIQA P+ L GRDV G A+TG+GKT++++ Sbjct: 7 EQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTST 66 Query: 293 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 + + P + + + P LI+APTRELAVQI A+A + + YGG Q Sbjct: 67 FHCLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQ 126 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>RHLB_YERPS (Q66G19) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 121 bits (303), Expect = 2e-27 Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ GF TPIQA P+ L GRDV G A+TG+GKTL+++ Sbjct: 8 EQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLAST 67 Query: 293 LVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ + P E Q + P LI+APTRELAVQI ++A + + YGG Q Sbjct: 68 FHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYDKQ 127 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + + NL + +VLDEADRM D+GF Sbjct: 128 LKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGF 175
>RHLB_YERPE (Q8ZAD8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 121 bits (303), Expect = 2e-27 Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ GF TPIQA P+ L GRDV G A+TG+GKTL+++ Sbjct: 8 EQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLAST 67 Query: 293 LVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ + P E Q + P LI+APTRELAVQI ++A + + YGG Q Sbjct: 68 FHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYDKQ 127 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I+I T GRLID + + NL + +VLDEADRM D+GF Sbjct: 128 LKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGF 175
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 120 bits (302), Expect = 2e-27 Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 3/153 (1%) Frame = +2 Query: 161 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGD 334 + +GF TPIQA P+AL G DV G A+TG+GKTL++++ + + +P L + + Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPE 83 Query: 335 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 514 P LILAPTRELA+QI +A KFG+ R +YGG Q L++GV+++IATPG Sbjct: 84 DPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPG 143 Query: 515 RLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 610 RLID ++ +L VLDEADRM D+GF Sbjct: 144 RLIDYVKQHKVVSLHACEICVLDEADRMFDLGF 176
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 120 bits (302), Expect = 2e-27 Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 3/153 (1%) Frame = +2 Query: 161 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGD 334 + +GF TPIQA P+AL G DV G A+TG+GKTL++++ + + +P L + + Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPE 83 Query: 335 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 514 P LILAPTRELA+QI +A KFG+ R +YGG Q L++GV+++IATPG Sbjct: 84 DPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPG 143 Query: 515 RLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 610 RLID ++ +L VLDEADRM D+GF Sbjct: 144 RLIDYVKQHKVVSLHACEICVLDEADRMFDLGF 176
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 120 bits (301), Expect = 3e-27 Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 3/153 (1%) Frame = +2 Query: 161 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGD 334 + +GF TPIQA P+AL G DV G A+TG+GKTL++++ + + +P L + + Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADRKPE 83 Query: 335 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 514 P LILAPTRELA+QI +A KFG+ R +YGG Q L++GV+++IATPG Sbjct: 84 DPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPG 143 Query: 515 RLIDMLEAGH-TNLRRVTYLVLDEADRMLDMGF 610 RLID ++ +L VLDEADRM D+GF Sbjct: 144 RLIDYVKQHKVVSLHACEICVLDEADRMFDLGF 176
>RHLB_SHEON (Q8EJQ5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 439 Score = 120 bits (301), Expect = 3e-27 Identities = 64/154 (41%), Positives = 98/154 (63%), Gaps = 2/154 (1%) Frame = +2 Query: 155 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQ 328 QA+A++GF TPIQA P+ L+ +D+ G A+TG+GKT+++++ H+ + P Q Sbjct: 22 QALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSSSIPEGRQ 81 Query: 329 GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 + P +I+APTRELA+QI +A ++R + +YGG Q + L +GV+I+I T Sbjct: 82 LNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGVDILIGT 141 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR+ID + G NL + +VLDEADRM D+GF Sbjct: 142 TGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGF 175
>RHLB_ERWCT (Q6CZD9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 429 Score = 120 bits (301), Expect = 3e-27 Identities = 69/168 (41%), Positives = 97/168 (57%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ + +A+ GF TPIQA P+ L GRDV G A+TG+GKTL+++ Sbjct: 7 EQKFSDFALHPQVIEALESKGFHYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLAST 66 Query: 293 LVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 ++ + P Q + P LI+APTRELAVQI ++A + + YGG Q Sbjct: 67 FHYLLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEALSHLTGLKLGLAYGGDGYDKQ 126 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ L GV+I++ T GRLID + H NL + +VLDEADRM D+GF Sbjct: 127 LKVLENGVDILVGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGF 174
>HAS1_CANAL (Q5AK59) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 565 Score = 120 bits (300), Expect = 4e-27 Identities = 64/164 (39%), Positives = 102/164 (62%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F A+F + M+AI + GF + T +QA+ P L GRDV+G A+TGSGKTL++++P + Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA-IE 168 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + +++ +G V+I+ PTRELA+QI A + + + GGA + + L Sbjct: 169 LLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLA 228 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 +GV +++ATPGRL+D L+ + LV+DEADR+L++GFE Sbjct: 229 KGVNLLVATPGRLLDHLKNTQFVFSNLKALVIDEADRILEIGFE 272
>RHLB_PASMU (Q9CJS1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 423 Score = 120 bits (300), Expect = 4e-27 Identities = 65/153 (42%), Positives = 95/153 (62%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 + A+ + GF TPIQA PM+L G+DV G A+TG+GKT++++ H+ Q + G Sbjct: 21 LAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAFLTATFHHLLTQQGDKGG 80 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 P LILAPTRELAVQI +A + ++ YGG Q++ + +GV+I+I T Sbjct: 81 RQPRALILAPTRELAVQINNDAALLTKATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTT 140 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR+ID ++ G L ++ +VLDEADRM D+GF Sbjct: 141 GRVIDYVKQGIVRLDKIQVVVLDEADRMFDLGF 173
>HAS1_NEUCR (Q7S2N9) ATP-dependent RNA helicase has-1 (EC 3.6.1.-)| Length = 578 Score = 119 bits (299), Expect = 5e-27 Identities = 65/164 (39%), Positives = 101/164 (61%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E N D M+AIA+ GF + T IQ +G P L G+DV+G A+TGSGKTL++++P + Sbjct: 109 FSELNLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM 168 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + R + +G +++ PTRELA+QI A + + GGA + + L Sbjct: 169 LSSL-RFKPRNGTGAIVVTPTRELALQIFGVARELMKNHSQTYGVVIGGANRRAEAEKLG 227 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 +GV ++IATPGRL+D L+ + + L++DEADR+L++GFE Sbjct: 228 KGVNLLIATPGRLLDHLQNTPFVFKNMRSLIIDEADRILEIGFE 271
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 119 bits (299), Expect = 5e-27 Identities = 74/165 (44%), Positives = 95/165 (57%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + D +A + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP L Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL-- 83 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 LE L+L PTRELA QI + GS +S I GG Q L Sbjct: 84 ---NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 140 Query: 482 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 613 + I+IATPGRLID LE NLR + YLV+DEADR+L+M FE Sbjct: 141 KKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 185
>RHLB_HAEIN (P44922) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 415 Score = 119 bits (298), Expect = 7e-27 Identities = 69/153 (45%), Positives = 94/153 (61%), Gaps = 2/153 (1%) Frame = +2 Query: 158 AIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQG 331 A+AK GF TPIQA P++L GRDV G A+TG+GKT++++ H+ P L+ Sbjct: 23 ALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAFLTATFHHLLTHQDPNLKYP 82 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 P LILAPTRELAVQI +A S ++ YGG Q++ + RGV+I+I T Sbjct: 83 H-PRALILAPTRELAVQISNDAEFLAKASGLKTALAYGGDGYDKQLQAIERGVDILIGTT 141 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR+ID ++ G L + +VLDEADRM D+GF Sbjct: 142 GRVIDYVKQGVIGLDEIQVVVLDEADRMFDLGF 174
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 119 bits (298), Expect = 7e-27 Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 1/154 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 M+ +A GF +PTPIQA+ P+AL G+DV+G AETGSGKT ++ILP L + +P+ + Sbjct: 268 MRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILERLLYRPK--KI 325 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 V++L PTRELA+Q A ATK +++ + T GG Q +L+ +++IATP Sbjct: 326 PTTRVVVLLPTRELAIQCHAVATKLAAFTDIKFTLAVGGLSLKAQELELKLRPDVIIATP 385 Query: 512 GRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR ID M + ++ V LVLDEADRML+ GF Sbjct: 386 GRFIDHMRNSASFSVDTVEILVLDEADRMLEDGF 419
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 118 bits (296), Expect = 1e-26 Identities = 67/155 (43%), Positives = 98/155 (63%), Gaps = 4/155 (2%) Frame = +2 Query: 158 AIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDG 337 A+ G+V+P+PIQA P +KG+DV+G+A+TGSGKT ++ LP L ++ R+ Q Sbjct: 20 ALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLHNIKLDVRVPQ--- 76 Query: 338 PIVLILAPTRELAVQIQAEATKFGSYSR----TRSTCIYGGAPKGPQIRDLRRGVEIVIA 505 +L+L PTRELAVQ+ A F ++S+ +YGG Q++ LR+G +I++ Sbjct: 77 --ILVLTPTRELAVQV---AEAFSNFSKKLIGVHVLALYGGQRYDLQLKSLRKGPQIIVG 131 Query: 506 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 TPGRL+D L+ +L + LVLDEAD ML MGF Sbjct: 132 TPGRLLDHLKRRTLSLSNLHSLVLDEADEMLRMGF 166
>HAS1_GIBZE (Q4IEK8) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 590 Score = 118 bits (296), Expect = 1e-26 Identities = 71/193 (36%), Positives = 114/193 (59%) Frame = +2 Query: 35 AMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWP 214 A + T++ QL V G E F E + M+AI + F + T IQ +G P Sbjct: 92 AENNTDLPNGGQLTLPPVAGAEAQS----FEELKLSEKTMKAINEMKFTKMTEIQRRGIP 147 Query: 215 MALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAE 394 +L GRDV+G A+TGSGKTL++++P ++ + + R + +G V++++PTRELA+QI Sbjct: 148 PSLAGRDVLGAAKTGSGKTLAFLIP-VIEMLSSLRFKPRNGTGVIVVSPTRELALQIFGV 206 Query: 395 ATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLV 574 A + ++ + GGA + + L +GV ++IATPGRL+D L+ + + LV Sbjct: 207 ARELMAHHSQTYGIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNTPFVFKNLKSLV 266 Query: 575 LDEADRMLDMGFE 613 +DEADR+L++GFE Sbjct: 267 IDEADRILEIGFE 279
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 118 bits (295), Expect = 2e-26 Identities = 74/165 (44%), Positives = 94/165 (56%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + D +A + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT ++ LP L Sbjct: 26 FKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL-- 83 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 LE L+L PTRELA QI + GS + I GG Q L Sbjct: 84 ---NALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALA 140 Query: 482 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 613 + IVIATPGRLID LE NLR + YLV+DEADR+L+M FE Sbjct: 141 KKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFE 185
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 117 bits (292), Expect = 3e-26 Identities = 70/158 (44%), Positives = 96/158 (60%), Gaps = 1/158 (0%) Frame = +2 Query: 140 PDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPR 319 P+ C +A A GF +P+ IQA+ P AL+G+D+IG+A+TGSGKT ++ LP L Q Sbjct: 47 PELC-RACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL-----QTL 100 Query: 320 LEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIV 499 E L+LAPTRELA QI + T GS R+ + GG Q L + I+ Sbjct: 101 WENPQPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPHII 160 Query: 500 IATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 610 +ATPGRL+D LE +L+ + YLV+DEADR+LD+ F Sbjct: 161 VATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDF 198
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 116 bits (291), Expect = 5e-26 Identities = 71/177 (40%), Positives = 99/177 (55%), Gaps = 1/177 (0%) Frame = +2 Query: 83 TVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGS 262 +VE E + + F + D + + F +PTPIQAQ P AL+GRD+IG+A+TGS Sbjct: 53 SVEVDESEEQTKTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGS 112 Query: 263 GKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIY 442 GKT ++ +P L Q E ++LAPTRELA QI GS R+ + Sbjct: 113 GKTAAFAIPVL-----QSLYENPQPLYCVVLAPTRELAYQISETFEALGSAMGLRTAVVV 167 Query: 443 GGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 610 GG Q L + +++ATPGRL+D LE +LR + +LV+DEADR+LDM F Sbjct: 168 GGMNMMTQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMDEADRLLDMEF 224
>DDX21_HUMAN (Q9NR30) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 783 Score = 115 bits (289), Expect = 8e-26 Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 5/207 (2%) Frame = +2 Query: 5 HEDVECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFP--DYCMQAIAKSGF 178 H + +C +A SE ++ Q +I VE +E +NFP + ++ + G Sbjct: 156 HPEPDCNPSEAASEESNSEIEQ--EIPVEQKEGAF-------SNFPISEETIKLLKGRGV 206 Query: 179 VEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGL--VHVGAQPRLEQGDGPIVLI 352 PIQA+ + G+D+I A TG+GKT S+ +P + +H Q R ++G P VL+ Sbjct: 207 TFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDR-KRGRAPQVLV 265 Query: 353 LAPTRELAVQIQAEATKFGSYSRTRST-CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 529 LAPTRELA Q+ + F ++ S C YGG P G Q +R G++I++ TPGR+ D Sbjct: 266 LAPTRELANQVSKD---FSDITKKLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDH 322 Query: 530 LEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ G +L ++ ++VLDE D+MLDMGF Sbjct: 323 IQNGKLDLTKLKHVVLDEVDQMLDMGF 349
>RHLB_PSESM (Q887N8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 115 bits (288), Expect = 1e-25 Identities = 71/166 (42%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 FH+ N M AI GF TPIQA LKG+D IG A+TG+GKT ++++ + Sbjct: 10 FHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQ 69 Query: 302 VG-AQPRLEQGDG-PIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 475 + P E+ G P LI+APTREL VQI +A Y+ GG Q++ Sbjct: 70 LTQTPPPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTNLNVMTFVGGMDFDKQLKQ 129 Query: 476 LR-RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 L R +I++ATPGRL+D + G +L V +VLDEADRMLDMGF Sbjct: 130 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGF 175
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 115 bits (288), Expect = 1e-25 Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 3/166 (1%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 FH+ N M AI GF TPIQAQ L+G+D IG A+TG+GKT ++++ + Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70 Query: 302 V--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 475 + P+ P LI+APTREL VQI +A Y+ GG Q++ Sbjct: 71 LLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQ 130 Query: 476 LR-RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 L R +I++ATPGRL+D + G +L V +VLDEADRMLDMGF Sbjct: 131 LEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGF 176
>DDX21_MOUSE (Q9JIK5) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 851 Score = 115 bits (287), Expect = 1e-25 Identities = 76/203 (37%), Positives = 116/203 (57%), Gaps = 5/203 (2%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEANFP--DYCMQAIAKSGFVEPT 190 + P ++ SETE ++I VE +E +NFP + ++ + G Sbjct: 237 DAPGEESSSETE-------KEIPVEQKEGAF-------SNFPISEETVKLLKARGVNFLF 282 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVLILAPT 364 PIQA+ + G+D+I A TG+GKT S+ +P + + G Q R ++G P VL+LAPT Sbjct: 283 PIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLQGGLQER-KRGRAPQVLVLAPT 341 Query: 365 RELAVQIQAEATKFGSYSRTRST-CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAG 541 RELA Q+ + F ++ S C YGG P G QI +R G++I++ TPGR+ D L+ G Sbjct: 342 RELANQVSKD---FSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNG 398 Query: 542 HTNLRRVTYLVLDEADRMLDMGF 610 +L ++ ++VLDE D+MLDMGF Sbjct: 399 KLDLTKLKHVVLDEVDQMLDMGF 421
>HAS1_ASHGO (Q74Z73) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 504 Score = 115 bits (287), Expect = 1e-25 Identities = 64/165 (38%), Positives = 101/165 (61%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E N ++AI K GF + T +QA+ P + GRDV+G A+TGSGKTL+++LP + Sbjct: 41 FDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEM 100 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + + + +G V+++ PTRELA+QI A + + + GGA + + L Sbjct: 101 LHSL-KFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLA 159 Query: 482 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 613 +GV ++IATPGRL+D L+ + + LV+DEADR+L++GFE Sbjct: 160 KGVNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFE 204
>RHLB_VIBCH (Q9KV52) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 438 Score = 115 bits (287), Expect = 1e-25 Identities = 67/168 (39%), Positives = 96/168 (57%), Gaps = 7/168 (4%) Frame = +2 Query: 128 EANFPDYCMQ-----AIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D+ +Q + K GFV TPIQA P+ L G+D+ G A+TG+GKTL+++ Sbjct: 8 EHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTAT 67 Query: 293 LVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQ 466 H+ P E P +I+APTRELA+QI +A + + ++ YGG Q Sbjct: 68 FNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQ 127 Query: 467 IRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 + L+ GV+I+I T GR+ID + NL + +VLDEADRM D+GF Sbjct: 128 LAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGF 175
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 115 bits (287), Expect = 1e-25 Identities = 77/205 (37%), Positives = 108/205 (52%), Gaps = 3/205 (1%) Frame = +2 Query: 5 HEDVECPAVQAMSET--EVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGF 178 H+D + P+ S E +++ I +G++V F + ++A GF Sbjct: 70 HDDDDDPSADKDSPAADEEQDEKKVATIADDGKKVE-----FSDLGVIPQIVEACTNMGF 124 Query: 179 VEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILA 358 PTPIQ + P AL+ RDVIG+A+TGSGKT ++ +P L + P+ +LA Sbjct: 125 KHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPK-----PFFACVLA 179 Query: 359 PTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE- 535 PTRELA QI + GS RS I GG Q L + +++ATPGRL D LE Sbjct: 180 PTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLEN 239 Query: 536 AGHTNLRRVTYLVLDEADRMLDMGF 610 +LR + YLV+DEADR+LDM F Sbjct: 240 TKGFSLRGLQYLVMDEADRLLDMDF 264
>HAS1_DEBHA (Q6BH93) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 568 Score = 114 bits (285), Expect = 2e-25 Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 1/189 (0%) Frame = +2 Query: 50 EVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKG 229 E + R+L T E F EA + ++AI GF + T +QA+ P L G Sbjct: 82 EEERTRELTKPTAESNHDDIVTDNFEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAG 141 Query: 230 RDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFG 409 RDV+G A+TGSGKTL++++P + + R + +G V++++PTRELA+QI A + Sbjct: 142 RDVLGAAKTGSGKTLAFLIPA-IEMLYSLRFKPRNGTGVVVVSPTRELALQIFGVARELM 200 Query: 410 SYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEA 586 ++ + GGA + + L +GV ++IATPGRL+D L+ + + V LV+DEA Sbjct: 201 AHHSQTFGIVIGGANRRQEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEA 260 Query: 587 DRMLDMGFE 613 DR+L++GFE Sbjct: 261 DRILEIGFE 269
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 113 bits (283), Expect = 4e-25 Identities = 70/175 (40%), Positives = 94/175 (53%), Gaps = 1/175 (0%) Frame = +2 Query: 89 EGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGK 268 + E PK F E D +A K GF PTPIQ + P+ L RDVIG+A+TGSGK Sbjct: 40 QNNEAPKT---FKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGK 96 Query: 269 TLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGG 448 T ++ LP + + P ++LAPTRELA QI + G RS I GG Sbjct: 97 TAAFALPVIQELWNNP-----SPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGG 151 Query: 449 APKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 610 Q L + +++ TPGRL+D LE +L+ + YL++DEADR+LDM F Sbjct: 152 MDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDF 206
>HAS1_CANGA (Q6FIL3) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 494 Score = 113 bits (283), Expect = 4e-25 Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F N M+AI K GF + TP+QA+ P + GRDV+G A+TGSGKTL+++LP + Sbjct: 31 FKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLP-TIE 89 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + + +G V+I+ PTRELA+QI + + + GGA + + L Sbjct: 90 LLHSLKFKPRNGTGVIIITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLM 149 Query: 482 RGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 613 +GV +++ATPGRL+D L+ + + + LV+DEADR+L++GFE Sbjct: 150 KGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFE 194
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 113 bits (283), Expect = 4e-25 Identities = 60/163 (36%), Positives = 93/163 (57%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + + ++A+ K G+ PT IQ + P A++ DV+G A TG+GKT +++LP L H Sbjct: 6 FEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQH 65 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + PR + G P +L+L PTRELA+Q+ +A + ++ I GG Sbjct: 66 LLDYPRRKPGP-PRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFN 124 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++V+ATPGRL+ ++ + + R V L+ DEADRML MGF Sbjct: 125 TNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGF 167
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 113 bits (282), Expect = 5e-25 Identities = 61/153 (39%), Positives = 96/153 (62%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++A+ G+ EPT +Q P AL+ +D++ ++TGSGKT S+ +P L + Sbjct: 14 LRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIP-LCELANWDE---- 68 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 + P LIL PTRELAVQ++ + T G + R ++T ++G + Q +L++ IV+ TP Sbjct: 69 NKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTP 128 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR++D +E G L R++YLV+DEAD ML+MGF Sbjct: 129 GRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGF 161
>RHLB_VIBVU (Q8DDN6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 113 bits (282), Expect = 5e-25 Identities = 62/155 (40%), Positives = 92/155 (59%), Gaps = 2/155 (1%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE-- 325 ++ + K GF TPIQA P+ L G+D+ G A+TG+GKTL+++ H+ P E Sbjct: 21 VEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAHEGR 80 Query: 326 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 505 Q P +I+APTRELA+QI +A + + ++ YGG Q+ L+ GV+++I Sbjct: 81 QPTQPRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYGGESYDKQLTKLQGGVDVLIG 140 Query: 506 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 T GR+ID + NL + +VLDEADRM D+GF Sbjct: 141 TTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGF 175
>RHLB_PSEPK (Q88NB7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 398 Score = 112 bits (281), Expect = 7e-25 Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 FH+ + M AI GF TPIQAQ L+G+D IG A+TG+GKT ++++ + Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70 Query: 302 VGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 475 + P ++ P LI+APTREL VQI +A Y+ GG Q++ Sbjct: 71 LQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKA 130 Query: 476 LR-RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 L R +I++ATPGRL+D + G +L V +VLDEADRMLDMGF Sbjct: 131 LEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGF 176
>HAS1_ASPFU (Q4WQM4) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 622 Score = 112 bits (281), Expect = 7e-25 Identities = 70/178 (39%), Positives = 105/178 (58%), Gaps = 1/178 (0%) Frame = +2 Query: 83 TVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGS 262 TVEG + F E + ++AI GF T IQ + P L GRDV+G A+TGS Sbjct: 134 TVEGEP-----QKFTELGLSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGS 188 Query: 263 GKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIY 442 GKTLS+++P + + A R + +G V++++PTRELA+QI A + Y + Sbjct: 189 GKTLSFLIPAVEMLSAL-RFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYGIVI 247 Query: 443 GGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 613 GGA + + L +GV ++IATPGRL+D L+ + + + LV+DEADR+L++GFE Sbjct: 248 GGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFE 305
>PRP28_YEAST (P23394) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) (Helicase CA8) Length = 588 Score = 112 bits (281), Expect = 7e-25 Identities = 81/212 (38%), Positives = 110/212 (51%), Gaps = 18/212 (8%) Frame = +2 Query: 32 QAMSETEVAQYRQLRD---ITVEGREVPKPIRFFHEANF--PDYCMQAIAKSGFVEPTPI 196 +++ E +R L++ I +G V P+R + E N D I + F PTPI Sbjct: 141 KSLHEMNERDWRILKEDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPI 200 Query: 197 QAQGWPMAL---KGRDVIGIAETGSGKTLSYILPGLVHVGAQP----RLEQGDGPIVLIL 355 Q P + RD +G+A TGSGKTL++++P L+ + P L+ DGP LIL Sbjct: 201 QRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALIL 260 Query: 356 APTRELAVQIQAEATKFGSYSRTRST------CIYGGAPKGPQIRDLRRGVEIVIATPGR 517 APTREL QIQ E K S I GG L G +I++ATPGR Sbjct: 261 APTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGR 320 Query: 518 LIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 LID LE +++V LVLDEAD+M+D+GFE Sbjct: 321 LIDSLENHLLVMKQVETLVLDEADKMIDLGFE 352
>RHLB_VIBPA (Q87KH5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 112 bits (281), Expect = 7e-25 Identities = 63/154 (40%), Positives = 91/154 (59%), Gaps = 2/154 (1%) Frame = +2 Query: 155 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE--Q 328 + + K GF TPIQA P+ L G+D+ G A+TG+GKTL+++ H+ P E Q Sbjct: 22 EGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLTTPEHEGRQ 81 Query: 329 GDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 508 P +I+APTRELA+QI +A + + ++ YGG Q+ L+ GV+I+I T Sbjct: 82 PTQPRAIIMAPTRELAIQIFNDAEPLIASTGLKAALAYGGESYDKQLAKLQDGVDILIGT 141 Query: 509 PGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR+ID + NL + +VLDEADRM D+GF Sbjct: 142 TGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGF 175
>HAS1_KLULA (Q6CXB7) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 497 Score = 112 bits (280), Expect = 9e-25 Identities = 63/165 (38%), Positives = 101/165 (61%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + D M+AI K GF + T +Q + P L G+DV+G A+TGSGKTL++++P + Sbjct: 36 FSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM 95 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + + + +G V+++ PTRELA+QI A + + + GGA + + L Sbjct: 96 LHSL-KFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEADKLM 154 Query: 482 RGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 613 +GV I+IATPGRL+D L+ + + + LV+DEADR+L++GFE Sbjct: 155 KGVNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFE 199
>RHLB_MANSM (Q65RG7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 417 Score = 112 bits (279), Expect = 1e-24 Identities = 60/153 (39%), Positives = 93/153 (60%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++A+ +GF TPIQA P++L G+DV G A+TG+GKT++++ H+ P + Sbjct: 21 LEALESNGFEYCTPIQALSLPISLAGKDVAGQAQTGTGKTMAFLTATFHHLLEHP--VKT 78 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 + P LI+APTRELAVQI +A + + ++ YGG Q++ + G +I+I T Sbjct: 79 NHPRALIMAPTRELAVQIAHDAERMVKTTGLKTALAYGGDGYDKQLKAIEAGADIIIGTT 138 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR+ID ++ L + +VLDEADRM D+GF Sbjct: 139 GRIIDYVKQNIIALSHIQVVVLDEADRMFDLGF 171
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 112 bits (279), Expect = 1e-24 Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 1/164 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGR-DVIGIAETGSGKTLSYILPGLV 298 F+E N D + AI GF +PT IQ + P+ L +++ A TGSGKT S+ +P L+ Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIP-LI 66 Query: 299 HVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 478 + + + +G +IL PTRELA+Q+ E + IYGG PQI+ L Sbjct: 67 EL-----VNENNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKAL 121 Query: 479 RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 + IV+ TPGR++D + G NL+ V Y +LDEAD ML+MGF Sbjct: 122 KNA-NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGF 164
>DBP4_YEAST (P20448) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-) (DEAD box| protein 4) (Helicase CA4) (Helicase UF1) Length = 770 Score = 110 bits (275), Expect = 3e-24 Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 1/167 (0%) Frame = +2 Query: 116 RFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGL 295 +FF + D ++ + +S F++ T IQA P++L+G DV+ A+TGSGKTL++++P + Sbjct: 41 KFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVP-V 99 Query: 296 VHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 475 + + + + DG LI++PTRELA+QI TK GS++ + + GG ++ Sbjct: 100 IEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELER 159 Query: 476 LRRGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 613 + R + I+I TPGR++ L +A N + LVLDEADR LDMGF+ Sbjct: 160 ISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFK 205
>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 425 Score = 110 bits (275), Expect = 3e-24 Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 6/167 (3%) Frame = +2 Query: 128 EANFPDYCM-----QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 E F D + QAI+ +GF TPIQA P+AL RDV G A+TG+GKTL+++L Sbjct: 8 ETRFADLALHPKIQQAISSAGFEYCTPIQALSLPVALSNRDVAGQAQTGTGKTLAFLLAT 67 Query: 293 LVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQI 469 + E+ + GP LI+APTRELA+QI +A + + IYGG Q Sbjct: 68 FNRLMQNESSEKTESGPRALIMAPTRELAIQIAHDADALIEHCGLKMGVIYGGEGYEGQK 127 Query: 470 RDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 L +I++ T GRLID + +L+ + +VLDEADRM D+GF Sbjct: 128 EQLAAQPDILVGTTGRLIDFYKQDLFSLKDIEVVVLDEADRMFDLGF 174
>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline| helicase 1) Length = 763 Score = 110 bits (275), Expect = 3e-24 Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 5/173 (2%) Frame = +2 Query: 107 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 286 KP + F EAN + + +A +G+ + TPIQ P+ +G D++ A+TGSGKT +++L Sbjct: 338 KPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLL 397 Query: 287 PGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAP 454 P + + L E G P +IL PTRELA QI E KF + +YGG Sbjct: 398 PIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLA 457 Query: 455 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD-MGF 610 G + +G I++ T GR+ E G L + + VLDEADRM+D MGF Sbjct: 458 VGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGF 510
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 110 bits (274), Expect = 4e-24 Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E + ++ + G +PTP+Q P L+GRD +G A+TGSGKT +++LP L Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + P G L+L PTRELA QI + G + I GG Q +L Sbjct: 64 LSEDPY-----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELS 118 Query: 482 RGVEIVIATPGRLIDMLEAGHT-NLRRVTYLVLDEADRMLDMG 607 R +VIATPGRL D L + +T N++++ +LV+DEADR+L+ G Sbjct: 119 RKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRLLEQG 161
>RHLB_VIBVY (Q7MGP7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 110 bits (274), Expect = 4e-24 Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 7/160 (4%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYI-------LPGLVHVGA 310 ++ + K GF TPIQA P+ L G+D+ G A+TG+GKTL+++ L H G Sbjct: 21 VEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTHAHEGR 80 Query: 311 QPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGV 490 QP P +I+APTRELA+QI +A + + ++ YGG Q+ L+ GV Sbjct: 81 QPTQ-----PRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYGGESYDKQLAKLQGGV 135 Query: 491 EIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 +++I T GR+ID + NL + +VLDEADRM D+GF Sbjct: 136 DVLIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGF 175
>HAS1_YEAST (Q03532) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-) (Helicase| associated with SET1 protein 1) Length = 505 Score = 109 bits (273), Expect = 6e-24 Identities = 61/165 (36%), Positives = 98/165 (59%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E ++AI K GF T +QA+ P L GRDV+G A+TGSGKTL++++P + Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPA-IE 102 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + + +G ++++ PTRELA+QI A + + + GGA + + L Sbjct: 103 LLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLM 162 Query: 482 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 613 +GV ++IATPGRL+D L+ + + L++DEADR+L++GFE Sbjct: 163 KGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFE 207
>HAS1_EMENI (Q5BBY1) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 609 Score = 109 bits (273), Expect = 6e-24 Identities = 67/181 (37%), Positives = 107/181 (59%), Gaps = 4/181 (2%) Frame = +2 Query: 83 TVEGREVPKPI---RFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAE 253 +V+ +P+P + F E + +Q I + GF T IQ + P L GRDV+G A+ Sbjct: 114 SVDAVSLPQPDGGPKKFTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAK 173 Query: 254 TGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRST 433 TGSGKTL++++P + + A R + +G V++++PTRELA+QI A + + Sbjct: 174 TGSGKTLAFLIPAIEMLSAL-RFKPRNGTGVIVVSPTRELALQIFGVARELLTAHSQTYG 232 Query: 434 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGF 610 + GGA + + L +GV ++IATPGRL+D L+ + + LV+DEADR+L++GF Sbjct: 233 IVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGF 292 Query: 611 E 613 E Sbjct: 293 E 293
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 109 bits (272), Expect = 7e-24 Identities = 60/152 (39%), Positives = 87/152 (57%) Frame = +2 Query: 155 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD 334 + I K G+ PTPIQ + P+ L G+DV+ +A TGSGKT ++LP + A+ Sbjct: 108 KGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKAR---SAQT 164 Query: 335 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 514 G LIL+PTRELA+Q + G ++ ++ I GG Q L +I+IATPG Sbjct: 165 GARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPG 224 Query: 515 RLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 RL+ + + L+ V Y+V DEADR+ +MGF Sbjct: 225 RLVHVAVEMNLKLQSVEYVVFDEADRLFEMGF 256
>GLH3_CAEEL (O01836) ATP-dependent RNA helicase glh-3 (EC 3.6.1.-) (Germline| helicase 3) Length = 720 Score = 109 bits (272), Expect = 7e-24 Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 5/173 (2%) Frame = +2 Query: 107 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 286 +P + F +++ P + + ++G+ TPIQ P+ G+D++ A+TGSGKT +++L Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354 Query: 287 PGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAP 454 P + + + L E G P +IL PTRELA QI E KF S +YGG Sbjct: 355 PIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGIN 414 Query: 455 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD-MGF 610 G + +G I++ T GR+ E G L + YLVLDEADRM+D MGF Sbjct: 415 VGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGF 467
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 108 bits (271), Expect = 9e-24 Identities = 67/165 (40%), Positives = 92/165 (55%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E A + G+++P+ IQ P AL+G+DVIG+AETGSGKT ++ +P L Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL-- 103 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 Q L+ L+L PTRELA QI + GS + I GG Q L Sbjct: 104 ---QSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160 Query: 482 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 613 R I++ATPGRL+D LE NL+ + +L++DEADR+L+M FE Sbjct: 161 RRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFE 205
>HAS1_SCHPO (Q09916) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 578 Score = 108 bits (271), Expect = 9e-24 Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Frame = +2 Query: 113 IRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 I F + + +AI + GF T IQ + P L GRDV+G A+TGSGKTL++++P Sbjct: 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPT 147 Query: 293 LVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIR 472 + + A + + +G V+I++PTRELA+QI A + Y + GGA + + Sbjct: 148 IEMLYAL-KFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQTFGIVIGGANRRAEAD 206 Query: 473 DLRRGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 613 L +GV +++ATPGRL+D L+ R + LV+DEADR+L++GFE Sbjct: 207 KLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFE 254
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 108 bits (270), Expect = 1e-23 Identities = 61/153 (39%), Positives = 86/153 (56%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++AI K GF PTPIQ + P+ L+GRDV+G+A TGSGKT ++++P + H+ + Sbjct: 81 LRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLA---N 137 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 LIL+P RELA+Q F + RS I GG Q L +IV+ATP Sbjct: 138 SNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATP 197 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR + + L + Y+V DEADR+ +MGF Sbjct: 198 GRFLHLKVEMKLELSSIEYVVFDEADRLFEMGF 230
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 108 bits (269), Expect = 2e-23 Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 1/164 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F N ++ ++ GF PT IQ + P+AL G+D++G A TGSGKT ++I+P L Sbjct: 261 FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILER 320 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + +P+ + VLIL PTRELA+Q + ATK S++ GG Q ++LR Sbjct: 321 LLYRPK--KVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELR 378 Query: 482 RGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 610 + +IVIATPGR ID M + + + +V+DEADRML+ GF Sbjct: 379 KRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGF 422
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 108 bits (269), Expect = 2e-23 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 1/164 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E N ++ +A F PTPIQ + P+AL G+D++G A TGSGKT ++++P L Sbjct: 304 FQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILER 363 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + +PR + V IL PTRELAVQ ATK +Y+ + GG Q L+ Sbjct: 364 LLFRPR--KVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENILK 421 Query: 482 RGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 610 + +++IATPGR ID M + + + LVLDEADRML+ GF Sbjct: 422 KRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGF 465
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 108 bits (269), Expect = 2e-23 Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E + ++ + G +PTP+Q P L+GRD +G A+TGSGKT +++LP L Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + P G L+L PTRELA QI + G + I GG Q +L Sbjct: 64 LSEDPY-----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELS 118 Query: 482 RGVEIVIATPGRLIDMLEAGHT-NLRRVTYLVLDEADRMLDMG 607 R +VIATPGRL D L + +T +++++ +LV+DEADR+L+ G Sbjct: 119 RKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQG 161
>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 932 Score = 108 bits (269), Expect = 2e-23 Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 1/164 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F F + + I+K GF +PTPIQ + P+ ++ RDV+G+A TGSGKT ++ LP + Sbjct: 99 FPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVEK 158 Query: 302 VGAQ-PRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 478 + + PR+ G +IL+P+RELA Q + +F + RS + GG Q + Sbjct: 159 LKSHSPRV----GVRAIILSPSRELASQTFKQVKEFSKGTDLRSIVLIGGDSLEEQFSSM 214 Query: 479 RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++++ATPGR + + L+ V Y+V DEADR+ +MGF Sbjct: 215 MTNPDVIVATPGRFLHLKVEMELELKTVEYIVFDEADRLFEMGF 258
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 108 bits (269), Expect = 2e-23 Identities = 61/165 (36%), Positives = 99/165 (60%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E + M+ I GF T +Q + P L GRDV+G A+TGSGKTLS+++P + Sbjct: 121 FTELGLSEKTMKGIEGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEM 180 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + A R + +G +I++PTRELA+QI + + ++ + GGA + + L Sbjct: 181 LSAL-RFKPRNGTGAIIVSPTRELALQIFGQVRELLAHHSQTYGIVIGGANRRAEAEKLM 239 Query: 482 RGVEIVIATPGRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 613 +GV +++ATPGRL+D L+ + + + L++DEADR+L++GFE Sbjct: 240 KGVNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFE 284
>DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 442 Score = 107 bits (268), Expect = 2e-23 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 4/167 (2%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + P++ ++++ +P+ IQ P +KG+D IG A TGSGKT+++ P L Sbjct: 3 FTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPMLAE 62 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 P G L+L PTRELA+QI + T G+ R IYGG Q +L+ Sbjct: 63 WSKDPC-----GIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDMVKQSLELQ 117 Query: 482 RGVEIVIATPGRLIDMLEAGHTN----LRRVTYLVLDEADRMLDMGF 610 + VIATPGRL D + + + RRV Y+V+DEADR+L GF Sbjct: 118 KMPHFVIATPGRLADHIRSSGEDTIRGFRRVRYVVMDEADRLLTPGF 164
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 107 bits (268), Expect = 2e-23 Identities = 69/166 (41%), Positives = 91/166 (54%), Gaps = 3/166 (1%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F N ++A+ F PTPIQA+ P+AL GRD++G A TGSGKT ++++P L Sbjct: 224 FTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILER 283 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYS--RTRSTCIYGGAPKGPQIRD 475 + + R + G VL+L PTRELAVQ +A R + GG Q Sbjct: 284 LCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFALLVGGLSLNAQAHT 343 Query: 476 LRRGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGF 610 LR +I+IATPGRLID L L + LV+DEADRML+ GF Sbjct: 344 LRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGF 389
>DDX50_HUMAN (Q9BQ39) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 737 Score = 107 bits (267), Expect = 3e-23 Identities = 62/164 (37%), Positives = 98/164 (59%), Gaps = 4/164 (2%) Frame = +2 Query: 131 ANFP--DYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHV 304 +NFP + ++ + G PIQ + + +G+D+I A TG+GKT S+ +P + + Sbjct: 140 SNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERL 199 Query: 305 GA-QPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRST-CIYGGAPKGPQIRDL 478 Q +++ P VL+LAPTRELA Q+ A F +R S C YGG QI + Sbjct: 200 QRNQETIKKSRSPKVLVLAPTRELANQV---AKDFKDITRKLSVACFYGGTSYQSQINHI 256 Query: 479 RRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 R G++I++ TPGR+ D L++G +L ++ ++VLDE D+MLD+GF Sbjct: 257 RNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGF 300
>DBP10_NEUCR (Q7S9J4) ATP-dependent RNA helicase dbp-10 (EC 3.6.1.-)| Length = 934 Score = 107 bits (266), Expect = 4e-23 Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 1/182 (0%) Frame = +2 Query: 68 QLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGI 247 Q + ++G+ V K F + ++AI + GF PTPIQ + P+ L+ +DV+G+ Sbjct: 84 QRKSSNIQGKSVKKG-GGFQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILERKDVVGM 142 Query: 248 AETGSGKTLSYILPGLVHV-GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRT 424 A TGSGKT ++++P + + G PR+ G LI++P+RELA+Q + G + Sbjct: 143 ARTGSGKTAAFVIPMIERLKGHSPRV----GSRALIMSPSRELALQTLKVVKELGRGTDL 198 Query: 425 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDM 604 ++ + GG Q + +I+IATPGR + + + +L + Y+V DEADR+ +M Sbjct: 199 KTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLASIKYVVFDEADRLFEM 258 Query: 605 GF 610 GF Sbjct: 259 GF 260
>MAK5_CRYNE (Q5KC99) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 772 Score = 107 bits (266), Expect = 4e-23 Identities = 68/164 (41%), Positives = 97/164 (59%), Gaps = 18/164 (10%) Frame = +2 Query: 170 SGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG-DGPI- 343 S F PT IQ++ P + GRDV+G+AETGSGKTL+Y LP L ++ Q + + G P+ Sbjct: 190 SSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPILHYLLGQRKSKAGIKRPLS 249 Query: 344 VLILAPTRELAVQI---------QAEATKFGSY----SRTRSTCIYGGAPKGPQIRDLRR 484 L+L PTRELA+Q+ A AT G R + GG Q R L R Sbjct: 250 ALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILER 309 Query: 485 GVEIVIATPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMG 607 G ++++ATPGRL D+++A T++R + +LV+DEADRM++ G Sbjct: 310 GCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENG 353
>DDX50_MOUSE (Q99MJ9) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 734 Score = 106 bits (265), Expect = 5e-23 Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 2/142 (1%) Frame = +2 Query: 191 PIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGA-QPRLEQGDGPIVLILAPTR 367 PIQ + + +G+D+I A TG+GKT S+ +P + + Q +++ P VL+LAPTR Sbjct: 159 PIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTR 218 Query: 368 ELAVQIQAEATKFGSYSRTRST-CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGH 544 ELA Q+ A F +R S C YGG QI +R G++I++ TPGR+ D L++G Sbjct: 219 ELANQV---AKDFKDITRKLSVACFYGGTSYQSQINQIRNGIDILVGTPGRIKDHLQSGR 275 Query: 545 TNLRRVTYLVLDEADRMLDMGF 610 +L ++ ++VLDE D+MLD+GF Sbjct: 276 LDLSKLRHVVLDEVDQMLDLGF 297
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 106 bits (265), Expect = 5e-23 Identities = 61/167 (36%), Positives = 87/167 (52%) Frame = +2 Query: 113 IRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 + F N ++ I GF +P+ IQ +G L G D IG A++G+GKT ++++ Sbjct: 30 VECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAA 89 Query: 293 LVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIR 472 L + Q VL+LAPTRELA QIQ A G Y R GG + Sbjct: 90 LQKIDYSLNACQ-----VLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMN 144 Query: 473 DLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 L+ GV +V+ TPGR+ DML+ G+ + + +LDEAD ML GF+ Sbjct: 145 KLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFK 191
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 106 bits (264), Expect = 6e-23 Identities = 65/165 (39%), Positives = 89/165 (53%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + N ++AI GF +PTPIQ P+ L G+D+ A TG+GKT ++ LP L Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + +PR Q VL+L PTREL +Q+ + + + + GG Q LR Sbjct: 280 LIYKPR--QAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALR 337 Query: 482 RGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 613 +I+IATPGRLID L +L + L+LDEADRMLD FE Sbjct: 338 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 382
>DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 908 Score = 106 bits (264), Expect = 6e-23 Identities = 55/155 (35%), Positives = 91/155 (58%) Frame = +2 Query: 146 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 325 + + IAK G+ +PTPIQ + P+ ++GRDV+G+A TGSGKT +++LP + + ++ Sbjct: 109 FILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERLKSR---- 164 Query: 326 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 505 Q G +IL+P+RELA+Q + +F + +S + GG + +I++ Sbjct: 165 QPGGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFSKMMTKPDIIVC 224 Query: 506 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 TPGR + + +L V Y+V DEADR+ +MGF Sbjct: 225 TPGRFLHLKVEMQYDLMTVQYIVFDEADRLFEMGF 259
>YQFR_BACSU (P54475) Probable ATP-dependent RNA helicase yqfR (EC 3.6.1.-)| Length = 438 Score = 106 bits (264), Expect = 6e-23 Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 3/158 (1%) Frame = +2 Query: 146 YCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLE 325 + + A+ + GF EPT IQ + P LK VIG ++TG+GKT +Y+LP L + + Sbjct: 14 FIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVV 73 Query: 326 QGDGPIVLILAPTRELAVQIQAEATKFGSY---SRTRSTCIYGGAPKGPQIRDLRRGVEI 496 Q V+I APTRELA QI EA K S+ RS C GG K I L+ + Sbjct: 74 Q-----VVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHL 128 Query: 497 VIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 V+ TPGR+ D+++ ++ + LV+DEAD MLDMGF Sbjct: 129 VVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGF 166
>DBP10_CANGA (Q6FNA2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 969 Score = 105 bits (263), Expect = 8e-23 Identities = 56/151 (37%), Positives = 89/151 (58%) Frame = +2 Query: 161 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGP 340 I+K GF +PTPIQ + P+ L+ RD++G+A TGSGKT +++LP + + G Sbjct: 130 ISKRGFRQPTPIQRKTIPLILQNRDIVGMARTGSGKTAAFVLPMIEKLKTH---SSKIGA 186 Query: 341 IVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 520 +IL+P+RELA+Q + +F + RS + GG Q + +++IATPGR Sbjct: 187 RAIILSPSRELAMQTHSVFKEFSRGTHLRSVLLTGGDSLEDQFGMMMTNPDVIIATPGRF 246 Query: 521 IDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 + + + +L+ V Y V DEADR+ +MGF+ Sbjct: 247 LHLKVEMNLDLKSVEYAVFDEADRLFEMGFQ 277
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline| helicase 2) Length = 974 Score = 105 bits (263), Expect = 8e-23 Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 5/173 (2%) Frame = +2 Query: 107 KPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYIL 286 K + F EAN + + +A +G+ + TPIQ P+ +G D++ A+TGSGKT +++L Sbjct: 549 KTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLL 608 Query: 287 PGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAP 454 P + + + L E G P +IL PTREL QI E KF + +YGG Sbjct: 609 PIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLA 668 Query: 455 KGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLD-MGF 610 G + +G I++ T GR+ E G L + + VLDEADRM+D MGF Sbjct: 669 VGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGF 721
>DBP10_KLULA (Q6CIR0) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 973 Score = 105 bits (262), Expect = 1e-22 Identities = 58/151 (38%), Positives = 89/151 (58%) Frame = +2 Query: 161 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGP 340 I+K GF +PTPIQ + P+ L+ RD++G+A TGSGKT +++LP + + G Sbjct: 141 ISKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIEKLKTH---SAKIGV 197 Query: 341 IVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 520 +IL+P+RELA+Q +F S RS + GG Q + ++VIATPGR Sbjct: 198 RAVILSPSRELAIQTHRVFKEFSKGSDLRSILLTGGDSLEDQFGMMMGNPDVVIATPGRF 257 Query: 521 IDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 + + + +L+ V Y+V DEADR+ +MGF+ Sbjct: 258 LHLKVEMNLDLKSVEYVVFDEADRLFEMGFQ 288
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 105 bits (262), Expect = 1e-22 Identities = 59/152 (38%), Positives = 84/152 (55%) Frame = +2 Query: 155 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD 334 + I K G+ PTPIQ + P+ L G+DV+ +A TGSGKT ++LP + Sbjct: 109 KGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKTH---SAQT 165 Query: 335 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 514 G LIL+PTRELA+Q + G ++ ++ I GG Q L +I+IATPG Sbjct: 166 GARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPG 225 Query: 515 RLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 RL+ + L+ V Y+V DEADR+ +MGF Sbjct: 226 RLVHVAVEMSLKLQSVEYVVFDEADRLFEMGF 257
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 105 bits (262), Expect = 1e-22 Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 1/166 (0%) Frame = +2 Query: 116 RFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGL 295 R F + N ++ +A F PTPIQ + P+AL G+D++G A TGSGKT ++++P L Sbjct: 310 RSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 369 Query: 296 VHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRD 475 + +PR + V IL PTRELAVQ ATK +++ + GG Q Sbjct: 370 ERLLFRPR--KVPTSRVAILMPTRELAVQCYNVATKLATHTDITFCQLVGGFSLREQENI 427 Query: 476 LRRGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 610 L++ +++IATPGR ID M + + + LVLDEADRML+ GF Sbjct: 428 LKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGF 473
>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 760 Score = 104 bits (259), Expect = 2e-22 Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + N ++AI GF +PTPIQ P+ L G+D+ A TG+GKT ++ LP L Sbjct: 186 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 245 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + +PR Q VL+L PTREL +Q+ + + + + GG Q LR Sbjct: 246 LIYKPR--QAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALR 303 Query: 482 RGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 613 +I+IATPGRLID L +L + L+LDEAD+MLD FE Sbjct: 304 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADKMLDEYFE 348
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 103 bits (258), Expect = 3e-22 Identities = 62/154 (40%), Positives = 83/154 (53%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++ I GF +P+ IQ + +KGRDVI +++G+GKT ++ + L + Q R Q Sbjct: 50 LRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQA 109 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 LILAPTRELAVQIQ G Y + GG G IR L G +V TP Sbjct: 110 -----LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 GR+ DM+ R + LVLDEAD ML+ GF+ Sbjct: 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFK 198
>DBP4_ASPOR (Q2UHB7) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 796 Score = 103 bits (258), Expect = 3e-22 Identities = 66/177 (37%), Positives = 102/177 (57%), Gaps = 1/177 (0%) Frame = +2 Query: 86 VEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSG 265 VE ++ + + F + + +A S F T IQ++ ALKGRD++G A+TGSG Sbjct: 35 VEDLDIKETYKSFSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSG 94 Query: 266 KTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYG 445 KTL++++P L ++ + + + DG LIL+PTRELA+QI K G Y + I G Sbjct: 95 KTLAFLIPVLENL-YRKQWSEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLIIG 153 Query: 446 GAPKGPQIRDLRRGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 613 G + L R + I++ TPGR++ L + ++ + LVLDEADR+LDMGF+ Sbjct: 154 GKSLKEEQERLGR-MNILVCTPGRMLQHLDQTAMFDVFNLQMLVLDEADRILDMGFQ 209
>ROK1_CANAL (Q9Y7C4) ATP-dependent RNA helicase CHR1 (EC 3.6.1.-)| Length = 578 Score = 103 bits (258), Expect = 3e-22 Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 6/207 (2%) Frame = +2 Query: 8 EDVECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEA----NFPDYCMQAIAKSG 175 ++ E P + +E + +R L V G ++P PI F + + + + + Sbjct: 91 KEEEIPPPELTTEEDAQTFRNLHKSKVTGDDIPIPIGSFQDMIGRFHINKKVLSNLIDNE 150 Query: 176 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLIL 355 F+EPTPIQ + P+ L RD+I A TGSGKTL++++P LV + + G LI+ Sbjct: 151 FIEPTPIQCESIPITLNNRDLIACAPTGSGKTLAFLIP-LVQQILSKNVSKNHGIRGLII 209 Query: 356 APTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRG--VEIVIATPGRLIDM 529 +PT ELAVQI E + + I ++ + +I+++TP RLID+ Sbjct: 210 SPTNELAVQIFQELEIITRGCKQINVAILSKQLASKLNNNIIKSSKYDIIVSTPLRLIDV 269 Query: 530 LEAGHTNLRRVTYLVLDEADRMLDMGF 610 ++ G+ +L ++ L++DEAD++ D GF Sbjct: 270 VKQGNMDLSKIEQLIIDEADKLFDHGF 296
>DBP10_ASHGO (Q757U8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 960 Score = 103 bits (257), Expect = 4e-22 Identities = 55/151 (36%), Positives = 88/151 (58%) Frame = +2 Query: 161 IAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGP 340 I++ GF +PTPIQ + P+ L+ RD++G+A TGSGKT +++LP + + G Sbjct: 135 ISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIEKLKMH---SAKIGA 191 Query: 341 IVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 520 +IL+P+RELA+Q +F S RS + GG Q + +++IATPGR Sbjct: 192 RAMILSPSRELAMQTHKVFKEFAKGSNLRSVLLTGGDGLEDQFSMMMSNPDVIIATPGRF 251 Query: 521 IDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 + + + +L + Y+V DEADR+ +MGF+ Sbjct: 252 LHLKVEMNLDLHSIEYVVFDEADRLFEMGFQ 282
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 103 bits (257), Expect = 4e-22 Identities = 62/154 (40%), Positives = 83/154 (53%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++ I GF +P+ IQ + +KGRDVI +++G+GKT ++ + L + Q R Q Sbjct: 50 LRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQA 109 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 LILAPTRELAVQIQ G Y + GG G IR L G +V TP Sbjct: 110 -----LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 GR+ DM+ R + LVLDEAD ML+ GF+ Sbjct: 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFK 198
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 103 bits (256), Expect = 5e-22 Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 4/187 (2%) Frame = +2 Query: 65 RQLRDITVEGREVPKPI---RFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRD 235 ++++D+ + E I F + + ++ + ++ F++ T IQ + P++LKG D Sbjct: 21 QKIKDLETKVEEYNPKIAKANLFQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHD 80 Query: 236 VIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSY 415 V+G A+TGSGKTL++++P ++ + + DG LI++PTRELA+QI +K G + Sbjct: 81 VLGAAKTGSGKTLAFLIP-VIEKLYREKWTDMDGLGALIISPTRELAMQIYEVLSKIGKH 139 Query: 416 SRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADR 592 + + + GG + + R + I+I TPGR++ M +A N + LVLDEADR Sbjct: 140 TTFSAGLVIGGKDVTFEKERISR-INILIGTPGRILQHMDQAVGFNTSNLQLLVLDEADR 198 Query: 593 MLDMGFE 613 LDMGF+ Sbjct: 199 CLDMGFK 205
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 929 Score = 103 bits (256), Expect = 5e-22 Identities = 61/175 (34%), Positives = 97/175 (55%) Frame = +2 Query: 86 VEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSG 265 ++GR V K F + ++AI + GF PTPIQ + P+ + G+DV+G+A TGSG Sbjct: 80 LKGRTVKKG-GGFQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSG 138 Query: 266 KTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYG 445 KT ++++P + + + G LIL+P+RELA+Q + G + +S + G Sbjct: 139 KTAAFVIPMIEKLKSHSTKVGARG---LILSPSRELALQTLKVVKELGKGTDLKSVLLVG 195 Query: 446 GAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 G Q + +IVIATPGR + + + +L + Y+V DEADR+ +MGF Sbjct: 196 GDSLEEQFSLMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGF 250
>PIT_DROME (Q9VD51) Probable ATP-dependent RNA helicase pitchoune (EC 3.6.1.-)| Length = 680 Score = 103 bits (256), Expect = 5e-22 Identities = 57/155 (36%), Positives = 97/155 (62%), Gaps = 1/155 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++AI + GF E T IQ++ LKGRD++G A+TGSGKTL++++P V + + R Sbjct: 199 LRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPA-VELINKLRFMPR 257 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 +G V+I++PTREL++Q + ++ + GG+ + + L +G+ I++ATP Sbjct: 258 NGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATP 317 Query: 512 GRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 613 GRL+D L+ L + + L++DE DR+L++GFE Sbjct: 318 GRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFE 352
>DBP9_ASPFU (Q4X0C2) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 649 Score = 103 bits (256), Expect = 5e-22 Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 6/170 (3%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F N QA+ K F +PTP+Q++ P+AL+G+D++ A+TGSGKT +Y+LP L Sbjct: 59 FESLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 118 Query: 302 V----GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSY--SRTRSTCIYGGAPKGP 463 + A P L+ G LIL PTRELA Q+Q+ KF ++ RS + Sbjct: 119 ILQKKAADPSLKATTG---LILVPTRELAEQVQSVIIKFSAFCGKDVRSVNLTQKVSDAV 175 Query: 464 QIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 Q L +++++TP R+I L +L +T+LV+DEAD +L G++ Sbjct: 176 QRTMLADYPDLIVSTPARVIANLGTSALSLENLTHLVIDEADLVLSYGYD 225
>DBP10_YARLI (Q6C7X8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 926 Score = 103 bits (256), Expect = 5e-22 Identities = 56/153 (36%), Positives = 88/153 (57%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++ IA+ GF +PTPIQ + P+ L+G+DV+G+A TGSGKT +++LP L + Sbjct: 114 LKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKVH---SAK 170 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 G +IL+P+RELA+Q F + + R + GG Q + + +I+IATP Sbjct: 171 VGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLVGGDSLEEQFKMMMSNPDIIIATP 230 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR + + +L V Y+ DEADR+ ++GF Sbjct: 231 GRFLHLKVEMELSLASVEYICFDEADRLFELGF 263
>DBP10_YEAST (Q12389) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-) (DEAD box| protein 10) Length = 995 Score = 103 bits (256), Expect = 5e-22 Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 8/170 (4%) Frame = +2 Query: 128 EANFPDYCMQAIA-----KSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPG 292 + +FP + + I + GF +PTPIQ + P+ L+ RD++G+A TGSGKT ++ILP Sbjct: 136 KGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPM 195 Query: 293 LVHVGAQPRLEQGDGPI---VLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGP 463 + +L+ G I +IL+P+RELA+Q F + RS + GG Sbjct: 196 V------EKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEE 249 Query: 464 QIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 Q + +++IATPGR + + + +L+ V Y+V DEADR+ +MGF+ Sbjct: 250 QFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQ 299
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 103 bits (256), Expect = 5e-22 Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 3/156 (1%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVG--AQPRLE 325 ++A++ F +PTPIQ++ P+AL G+D++ A TGSGKT ++++P + + A+ R Sbjct: 345 LRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTIERLTWRAKTRTP 404 Query: 326 QGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 505 VLILAPTRELA+Q + ++ R GG Q +L+ E+VIA Sbjct: 405 HEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKSQEAELKLRPEVVIA 464 Query: 506 TPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGF 610 TPGRLID + + L + LV+DEADRML+ GF Sbjct: 465 TPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGF 500
>HAS1_YARLI (Q6C7D2) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 605 Score = 103 bits (256), Expect = 5e-22 Identities = 56/155 (36%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 MQ++ GF TP+Q + P L GRDV+G A+TGSGKTL++++P + + + + + Sbjct: 143 MQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA-IEMLRKLKFKPR 201 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 +G V++++PTRELA+QI A + + GG + + L +GV +++ TP Sbjct: 202 NGTGVIVVSPTRELALQIYGVARDLMANHSQTLGIVIGGNNRRQEEEKLNKGVNLLVCTP 261 Query: 512 GRLIDMLEAGHTNL-RRVTYLVLDEADRMLDMGFE 613 GRL+D L+ + + + L++DEADR+L++GFE Sbjct: 262 GRLLDHLQNSQGFVFKNLKALIIDEADRILEIGFE 296
>DDX31_HUMAN (Q9H8H2) Probable ATP-dependent RNA helicase DDX31 (EC 3.6.1.-)| (DEAD box protein 31) (Helicain) Length = 851 Score = 103 bits (256), Expect = 5e-22 Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 3/145 (2%) Frame = +2 Query: 188 TPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGA-QPRLEQGDGPIVLILAPT 364 T +Q Q P+ L+GRD + ++TGSGKTL+Y +P + + A + ++++ DGP L+L PT Sbjct: 255 TSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPT 314 Query: 365 RELAVQIQAEATK-FGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEA- 538 RELA+Q K ++ + GG + + LR+G+ I+I+TPGRL+D +++ Sbjct: 315 RELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKST 374 Query: 539 GHTNLRRVTYLVLDEADRMLDMGFE 613 + + R+ +LV DEADR+LD+GFE Sbjct: 375 KNIHFSRLRWLVFDEADRILDLGFE 399
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 102 bits (255), Expect = 7e-22 Identities = 62/147 (42%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Frame = +2 Query: 173 GFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLI 352 G++ TP+QA P L G+DV A+TGSGKT ++ L L + A Q L+ Sbjct: 22 GYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQA-----LV 76 Query: 353 LAPTRELAVQIQAEATKFGSY-SRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 529 L PTRELA Q+ E + + T+ + GG P G Q L+ I++ATPGRL+D Sbjct: 77 LCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDH 136 Query: 530 LEAGHTNLRRVTYLVLDEADRMLDMGF 610 L+ G +L + LV+DEADRMLDMGF Sbjct: 137 LQKGTVSLDALNTLVMDEADRMLDMGF 163
>HAS1_CRYNE (Q5KMN6) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 607 Score = 102 bits (255), Expect = 7e-22 Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 1/165 (0%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F N AI + GF T +QA+ P L G+DV+G A TGSGKT+++++P V Sbjct: 131 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPS-VE 189 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + R + +G V+I++PTRELA+QI A + + GGA + + L Sbjct: 190 LLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQGHSQTFGVLMGGANRKAEADKLV 249 Query: 482 RGVEIVIATPGRLIDMLE-AGHTNLRRVTYLVLDEADRMLDMGFE 613 +GV +++ATPGRL+D L+ + + LV+DEADR+L++GFE Sbjct: 250 KGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFE 294
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 102 bits (254), Expect = 9e-22 Identities = 67/167 (40%), Positives = 87/167 (52%), Gaps = 4/167 (2%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F E + +A+ PT IQ+ P LKG D IG A+TGSGKT+++ P L Sbjct: 3 FEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLTQ 62 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 P G L+L PTRELA+QI + GS + + I GG Q +L+ Sbjct: 63 WSEDP-----SGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQALELQ 117 Query: 482 RGVEIVIATPGRLID-MLEAGH---TNLRRVTYLVLDEADRMLDMGF 610 R V+ATPGRL D +L +G LRRV YL+LDEADR+L F Sbjct: 118 RRPHFVVATPGRLADHILNSGEDTVCGLRRVKYLILDEADRLLSNSF 164
>HAS1_USTMA (Q4P6N0) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 517 Score = 102 bits (254), Expect = 9e-22 Identities = 60/157 (38%), Positives = 98/157 (62%), Gaps = 4/157 (2%) Frame = +2 Query: 155 QAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD 334 +AI GF T +QA+ P + G+DV+G A+TGSGKTLS+++P + + + + + + Sbjct: 63 KAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPA-IEMLHRLKFKPRN 121 Query: 335 GPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 514 G +I++PTRELA+QI A + ++ I GGA + + L++GV +++ATPG Sbjct: 122 GTGAIIISPTRELALQIFGVAKELMAHHHQTFGIIMGGANRRAEADKLQKGVNLIVATPG 181 Query: 515 RLIDMLEAG----HTNLRRVTYLVLDEADRMLDMGFE 613 RL+D L+ +NL+ L +DEADR+L++GFE Sbjct: 182 RLLDHLQNTKGFVFSNLKA---LCIDEADRILEIGFE 215
>DBP9_EMENI (Q5AZA6) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 610 Score = 102 bits (254), Expect = 9e-22 Identities = 64/170 (37%), Positives = 93/170 (54%), Gaps = 6/170 (3%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F N QA+ K F +PTP+QA+ P+AL+G+D++ A+TGSGKT +Y+LP L Sbjct: 30 FETLNLDPRLRQALVKEKFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 89 Query: 302 V----GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSY--SRTRSTCIYGGAPKGP 463 + P ++ G LIL PTRELA Q+Q T F ++ RS + Sbjct: 90 ILQKKAIDPSMKATTG---LILVPTRELAEQVQKVITTFAAFCGKDVRSVNLTQKVSDAV 146 Query: 464 QIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 Q L +IV++TP R+I L +L +T+LV+DEAD +L G+E Sbjct: 147 QKAMLADYPDIVVSTPARVIANLGTSALSLENLTHLVIDEADLVLSYGYE 196
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 102 bits (253), Expect = 1e-21 Identities = 61/154 (39%), Positives = 82/154 (53%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++ I GF +P+ IQ + +KGRDVI +++G+GKT ++ + L + Q R Q Sbjct: 50 LRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQA 109 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 LILAP RELAVQIQ G Y + GG G IR L G +V TP Sbjct: 110 -----LILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 GR+ DM+ R + LVLDEAD ML+ GF+ Sbjct: 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFK 198
>DDX18_HUMAN (Q9NVP1) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) (Myc-regulated DEAD box protein) (MrDb) Length = 670 Score = 102 bits (253), Expect = 1e-21 Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 8/172 (4%) Frame = +2 Query: 122 FHEANFPDYC-------MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSY 280 F + +F C ++AI + GF T IQ + L+GRD++ A+TGSGKTL++ Sbjct: 174 FEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAF 233 Query: 281 ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKG 460 ++P V + + R +G VLIL+PTRELA+Q + ++ I GG+ + Sbjct: 234 LIPA-VELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRS 292 Query: 461 PQIRDLRRGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 + + L G+ I++ATPGRL+D M + + LV+DEADR+LD+GFE Sbjct: 293 AEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFE 344
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 102 bits (253), Expect = 1e-21 Identities = 58/164 (35%), Positives = 86/164 (52%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + N ++ I G+ P+ IQ + +GRDV+ A++G+GKT ++ + L Sbjct: 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + Q LILAPTRELA+QI+ T G Y + GG I R Sbjct: 85 INENEKATQA-----LILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFR 139 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 GV+IV+ TPGR++DM+E + +V +LDEAD ML GF+ Sbjct: 140 SGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFK 183
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 102 bits (253), Expect = 1e-21 Identities = 60/178 (33%), Positives = 90/178 (50%) Frame = +2 Query: 80 ITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETG 259 + E E K F + ++ I F +P+ IQ + ++GRDVI A++G Sbjct: 12 LAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSG 71 Query: 260 SGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCI 439 +GKT ++ + L + R Q L+L+PTRELA+QIQ+ G Y + Sbjct: 72 TGKTATFSISMLQSIDTTLRETQA-----LVLSPTRELAIQIQSVVLALGDYLNVQCHAC 126 Query: 440 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 GG G IR L G IV TPGR+ DM+ H + + L+LDE+D +L+MGF+ Sbjct: 127 IGGTSVGEDIRKLDYGQHIVSGTPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFK 184
>DBP4_CANAL (Q5AF95) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 102 bits (253), Expect = 1e-21 Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 2/166 (1%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + + ++ + ++ FV T IQ + P+ALKG D++G A TGSGKTL++++P ++ Sbjct: 50 FSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIP-VIE 108 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + ++ + DG LI++PTRELAVQI TK G Y+ + + GG K Q R Sbjct: 109 SLIRNKITEYDGLAALIVSPTRELAVQIFEVLTKIGKYNTFSAGLVTGG--KDVQFEKER 166 Query: 482 -RGVEIVIATPGRLIDML-EAGHTNLRRVTYLVLDEADRMLDMGFE 613 + I++ TPGR+ L EA + LVLDEADR LDMGF+ Sbjct: 167 VSRMNILVGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFK 212
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 101 bits (252), Expect = 2e-21 Identities = 58/163 (35%), Positives = 83/163 (50%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 28 FESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQV 87 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 88 IDTAVRETQA-----LVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLD 142 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 G IV TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 143 YGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGF 185
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 101 bits (252), Expect = 2e-21 Identities = 58/163 (35%), Positives = 83/163 (50%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 29 FESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQV 88 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 89 IDTAVRETQA-----LVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLD 143 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 G IV TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 144 YGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGF 186
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 101 bits (252), Expect = 2e-21 Identities = 57/163 (34%), Positives = 84/163 (51%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQV 86 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 87 IDTVVRETQA-----LVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLD 141 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 G +V TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 142 YGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGF 184
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 101 bits (252), Expect = 2e-21 Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 2/166 (1%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F N M+ I+ G+ PTPIQ++ P+AL G+D++ A TGSGKT +YI+P L Sbjct: 254 FQTLNLSRPVMKGISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLER 313 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSY-SRTRSTCIYGGAPKGPQIRDL 478 + + + V++L PTREL++Q+ K Y S R GG Q ++L Sbjct: 314 L--LYKSSKVAATKVVVLTPTRELSIQVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQEL 371 Query: 479 RRGVEIVIATPGRLIDMLEAGHT-NLRRVTYLVLDEADRMLDMGFE 613 + E+VIATPGR ID + + N+ V LV+DEADRML+ GF+ Sbjct: 372 KTRPEVVIATPGRFIDHVRNSPSFNVDDVEILVIDEADRMLEEGFQ 417
>DBP10_EMENI (Q5BFU7) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 936 Score = 101 bits (252), Expect = 2e-21 Identities = 56/153 (36%), Positives = 90/153 (58%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++AIA+ GF PTPIQ + P+ ++ +DV+G+A TGSGKT ++++P + + + Sbjct: 103 LKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGA 162 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 G LIL+P+RELA+Q + G + +S + GG Q + +IVIATP Sbjct: 163 RG---LILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVIATP 219 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR + + + +L + Y+V DEADR+ +MGF Sbjct: 220 GRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGF 252
>DBP4_CANGA (Q6FPT7) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 101 bits (252), Expect = 2e-21 Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 1/166 (0%) Frame = +2 Query: 119 FFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLV 298 FF + ++ + ++ F++ T IQ +L+G DV G A+TGSGKTL++++P L Sbjct: 42 FFKDLPISKSTLKGLNEASFIKMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLE 101 Query: 299 HVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDL 478 + + R + DG LI++PTRELA+QI K GS+++ + + GG ++ + Sbjct: 102 KL-YRERWTEFDGLGALIISPTRELAMQIYEVLVKIGSHTQFSAGLVIGGKDVNFELERI 160 Query: 479 RRGVEIVIATPGRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 + + I+I TPGR++ M +A N + LVLDEADR LDMGF+ Sbjct: 161 AK-INILIGTPGRILQHMDQAVGLNTSNLQMLVLDEADRCLDMGFQ 205
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 101 bits (251), Expect = 2e-21 Identities = 60/155 (38%), Positives = 94/155 (60%), Gaps = 1/155 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++ + ++ +++ T IQ P+ALKG DV+G A+TGSGKTL++++P L + R + Sbjct: 53 VKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLEKL-YHERWTEL 111 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 DG L+++PTRELA+QI K G Y + + GG ++ + + + I+I TP Sbjct: 112 DGLGALVISPTRELAMQIYEVLVKIGKYMSFSAGLVIGGKDVKFEMERVSK-INILIGTP 170 Query: 512 GRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 GRL+ M ++ N + LVLDEADR LDMGF+ Sbjct: 171 GRLLQHMDQSVGLNTSNLQILVLDEADRCLDMGFK 205
>RHLB_PHOPR (Q6LLL5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 101 bits (251), Expect = 2e-21 Identities = 57/155 (36%), Positives = 90/155 (58%), Gaps = 2/155 (1%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++ + GF TPIQA P+ L G+D+ G A+TG+GKTL+++ ++ P ++ Sbjct: 21 LEGLDAQGFHYCTPIQALALPVVLTGQDIAGQAQTGTGKTLAFLTATFNYLLLNPASDER 80 Query: 332 --DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 505 + P +I+APTRELA+QI +A + + ++ YGG Q + GV+I+I Sbjct: 81 KTNQPRAIIMAPTRELAIQIYNDAAPLLASTGLKAGLAYGGEAYEKQQKVFAEGVDILIG 140 Query: 506 TPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 T GR+ID + +L + +VLDEADRM D+GF Sbjct: 141 TCGRIIDFYKQRVIDLASIQVVVLDEADRMFDLGF 175
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 100 bits (250), Expect = 3e-21 Identities = 60/181 (33%), Positives = 92/181 (50%) Frame = +2 Query: 71 LRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIA 250 + ++ + E + F E N + ++ I G+ P+ +Q++ KGRDVI A Sbjct: 6 MENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQA 65 Query: 251 ETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRS 430 ++G+GKT ++ + L + R Q LIL+PTRELAVQIQ G + + Sbjct: 66 QSGTGKTATFSIGILQSIDLSVRDTQA-----LILSPTRELAVQIQNVVLALGDHMNVQC 120 Query: 431 TCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GG G I+ L G +V TPGR+ DM+ + R V L+LDEAD +L+ GF Sbjct: 121 HACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGF 180 Query: 611 E 613 + Sbjct: 181 K 181
>MAK5_ASHGO (Q757I6) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 752 Score = 100 bits (249), Expect = 3e-21 Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 12/190 (6%) Frame = +2 Query: 74 RDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAE 253 +DI ++ E P+ + + +Q +++ GF PT IQ Q P AL G D++G A Sbjct: 166 KDIGLDEAEAPELPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKALDGHDIMGKAS 225 Query: 254 TGSGKTLSY---ILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRT 424 TGSGKTL+Y IL G++ R PI LI PTRELA Q+ + G+ Sbjct: 226 TGSGKTLAYGIPILEGIIRDDTDSR------PIGLIFTPTRELAHQVTDHLREVGALLVK 279 Query: 425 RS----TCIYGG--APKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRR---VTYLVL 577 R+ C+ GG K ++ + +V+ATPGR +++LE T + R V LVL Sbjct: 280 RNPYSIMCLTGGLSIQKQERLLKYKGSARVVVATPGRFLELLEKDQTLIDRFAKVDTLVL 339 Query: 578 DEADRMLDMG 607 DEADR+L G Sbjct: 340 DEADRLLQDG 349
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 100 bits (249), Expect = 3e-21 Identities = 57/163 (34%), Positives = 84/163 (51%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 26 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQV 85 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 86 IDTVVRESQA-----LVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLD 140 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 G +V TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 141 YGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGF 183
>DBP10_ASPFU (Q8NJM2) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 869 Score = 100 bits (249), Expect = 3e-21 Identities = 54/153 (35%), Positives = 89/153 (58%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++AIA+ GF PTPIQ + P+ + +DV+G+A TGSGKT ++++P + + + Sbjct: 82 LKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGA 141 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 G L+L+P+RELA+Q + G + +S + GG Q + +I+IATP Sbjct: 142 RG---LVLSPSRELALQTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMIAGNPDIIIATP 198 Query: 512 GRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 GR + + + +L + Y+V DEADR+ +MGF Sbjct: 199 GRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGF 231
>DDX18_MOUSE (Q8K363) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) Length = 660 Score = 100 bits (248), Expect = 4e-21 Identities = 58/155 (37%), Positives = 95/155 (61%), Gaps = 1/155 (0%) Frame = +2 Query: 152 MQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG 331 ++AI + GF T IQ + L+GRD++ A+TGSGKTL++++P ++ + + + Sbjct: 181 LKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIP-VIELIVKLKFMPR 239 Query: 332 DGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATP 511 +G VLIL+PTRELA+Q + ++ I GG+ + +++ L G+ I++ATP Sbjct: 240 NGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNGINIIVATP 299 Query: 512 GRLID-MLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 GRL+D M + + LV+DEADR+LD+GFE Sbjct: 300 GRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFE 334
>DBP10_GIBZE (Q4HZ42) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 897 Score = 100 bits (248), Expect = 4e-21 Identities = 61/187 (32%), Positives = 100/187 (53%) Frame = +2 Query: 50 EVAQYRQLRDITVEGREVPKPIRFFHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKG 229 + A +R+ ++ +GR V K F + ++AI + GF PTPIQ + P+ L Sbjct: 63 QAASFRKATNL--KGRTVKKG-GGFQAMGLNNNLLKAITRKGFSVPTPIQRKAIPLILDR 119 Query: 230 RDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFG 409 +D++G+A TGSGKT ++++P + + A G LI++P+RELA+Q +F Sbjct: 120 KDLVGMARTGSGKTAAFVIPMIEKLRAH---SARFGTRALIMSPSRELAIQTLKVVKEFS 176 Query: 410 SYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEAD 589 + + + GG Q + +IVIATPGR + + +L + Y+V DEAD Sbjct: 177 RGTDLKCVLLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVEMSLDLSSIKYVVFDEAD 236 Query: 590 RMLDMGF 610 R+ +MGF Sbjct: 237 RLFEMGF 243
>ROK1_DEBHA (Q6BP45) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 550 Score = 100 bits (248), Expect = 4e-21 Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 12/210 (5%) Frame = +2 Query: 17 ECPAVQAMSETEVAQYRQLRDITVEGREVPKPIRFFHEA----NFPDYCMQAIAKSGFVE 184 E P + S+ + + R+L V G ++P PI F + + + +GF E Sbjct: 77 EVPPLTISSDDDARKLRKLNKSKVSGEDIPLPIGSFEDLIGRYKLDKKLLSNLIDAGFTE 136 Query: 185 PTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPT 364 PTPIQ + P++L+GRD+I A TGSGKTL++++P + + + G LI++PT Sbjct: 137 PTPIQDEAIPISLEGRDLIACAPTGSGKTLAFLIPLVQTILQSNPNVKNYGIRGLIISPT 196 Query: 365 RELAVQI--------QAEATKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRL 520 ELAVQI + + K G S+ + I + +I+++TP RL Sbjct: 197 NELAVQIFQELNTMTKGKKMKIGILSKQLANKINNKIINSSK-------YDILVSTPLRL 249 Query: 521 IDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 ID ++ +L +V LV+DE D++ D GF Sbjct: 250 IDSIKNETISLSKVEQLVIDETDKLFDQGF 279
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 99.8 bits (247), Expect = 6e-21 Identities = 60/164 (36%), Positives = 88/164 (53%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + N + I ++GF +P+PIQ + PMAL GRD++ A+ G+GKT S+I+P L Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQL 91 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 V +P+L + LIL PTRELA+Q G + T+ GG I L Sbjct: 92 V--KPKLNKVQA---LILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLH 146 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 V I++ TPGR++D+ +L V+DEAD+ML F+ Sbjct: 147 DPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFK 190
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 99.8 bits (247), Expect = 6e-21 Identities = 57/163 (34%), Positives = 84/163 (51%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + + + ++ I G+ P+ +Q++ KGRD I A++G+GKT ++ + L Sbjct: 26 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGILQV 85 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + R Q L+L+PTRELA QIQ+ G Y + GG G IR L Sbjct: 86 IDTVVRETQA-----LVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLD 140 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGF 610 G +V TPGR+ DM+ H R + LVLDEAD +L+ GF Sbjct: 141 YGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGF 183
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 99.8 bits (247), Expect = 6e-21 Identities = 54/164 (32%), Positives = 87/164 (53%) Frame = +2 Query: 122 FHEANFPDYCMQAIAKSGFVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLSYILPGLVH 301 F + D ++ I GF P+ IQ++ +KGRD I A++G+GKT ++ + L Sbjct: 26 FESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEV 85 Query: 302 VGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRTRSTCIYGGAPKGPQIRDLR 481 + + R Q ++L+PTRELA QIQ+ G Y + GG ++ L Sbjct: 86 IDTKHRETQA-----MVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLE 140 Query: 482 RGVEIVIATPGRLIDMLEAGHTNLRRVTYLVLDEADRMLDMGFE 613 G ++V TPGR +DM++ G + + L+LDEAD +L+ GF+ Sbjct: 141 AGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADELLNKGFQ 184 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,954,843 Number of Sequences: 219361 Number of extensions: 2339484 Number of successful extensions: 9502 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 7599 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8657 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
