ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal11h15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108753.1| Zea mays PCO090965 mRNA sequence 264 3e-67
2ref|XM_469008.1| Oryza sativa (japonica cultivar-group), mRNA 252 1e-63
3gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genom... 137 5e-29
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 137 5e-29
5gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 137 5e-29
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
7gb|AY105609.1| Zea mays PCO130861 mRNA sequence 60 9e-06
8ref|NM_202754.1| Arabidopsis thaliana ATMRK1; kinase AT3G63260 (... 58 3e-05
9ref|NM_116191.2| Arabidopsis thaliana ATMRK1; kinase AT3G63260 (... 58 3e-05
10gb|AY117337.1| Arabidopsis thaliana putative ATMRK1 protein (At3... 58 3e-05
11gb|AY080717.1| Arabidopsis thaliana putative ATMRK1 protein (At3... 58 3e-05
12emb|BX822415.1|CNS0A793 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
13emb|BX823676.1|CNS0A6O3 Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
14emb|BX823523.1|CNS0A4WD Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
15gb|AY086480.1| Arabidopsis thaliana clone 253505 mRNA, complete ... 58 3e-05
16dbj|AB006810.1| Arabidopsis thaliana mRNA for ATMRK1, complete cds 58 3e-05
17gb|AY738763.1| Carica papaya serine/threonine protein kinase 1 m... 54 5e-04
18emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BA... 48 0.033
19gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete s... 44 0.52
20dbj|AK109696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.52
21ref|XM_469711.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
22ref|XM_775936.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.0
23dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 42 2.0
24dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 2.0
25emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 2.0
26gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosom... 40 8.1
27gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complet... 40 8.1
28gb|AF142884.1| Uncultured archaeon DEEP-10 16S ribosomal RNA gen... 40 8.1
29gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosom... 40 8.1
30gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 8.1
31gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Ho... 40 8.1
32emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, c... 40 8.1
33gb|S76788.1| orf {promoter-like sequence P116} [Lactobacillus pa... 40 8.1
34gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 ... 40 8.1
35dbj|AB009371.1| Mus musculus Tsc2 and Nthl1 genes for tuberin an... 40 8.1
36gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, comple... 40 8.1
37emb|AL591067.35| Mouse DNA sequence from clone RP23-333D2 on chr... 40 8.1
38emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chr... 40 8.1 
>gb|AY108753.1| Zea mays PCO090965 mRNA sequence
          Length = 1019

 Score =  264 bits (133), Expect = 3e-67
 Identities = 247/285 (86%)
 Strand = Plus / Plus

                                                                       
Query: 305 tatgtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctc 364
           |||||||| || |||||||| ||||| || ||||||||||||||||||||| | ||||||
Sbjct: 681 tatgtgcgtgcagacaagattgatcttacgagcctcgacatccagctggagaaccagctc 740

                                                                       
Query: 365 aacaagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagatt 424
           | |||||  ||| ||||  ||||  |||| || | ||| || |||| ||| |||||||| 
Sbjct: 741 accaagacctggggcaaagccaatctcaaatcccaggggccaaaggaggagtgggagatc 800

                                                                       
Query: 425 gaccttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctac 484
           |||||||| ||||||||||||||  | ||||||||||||||||| ||||| || ||||||
Sbjct: 801 gaccttgcaaagctggagatccgctatgtcatcgctcaggggacgtatggcacggtctac 860

                                                                       
Query: 485 cgcggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatggt 544
           || |||||||| ||||| ||| | |||||||||||||| |||||||||||||||||||||
Sbjct: 861 cggggcacctacgatggacaggacgtcgcagtgaagcttttggattggggagaagatggt 920

                                                        
Query: 545 tttgccacagaagccgaaactactgctttacgaacatcatttaag 589
           |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 921 tttgccacagaagctgaaactgctgctttacgaacatcatttaag 965
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>ref|XM_469008.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1567

 Score =  252 bits (127), Expect = 1e-63
 Identities = 247/287 (86%)
 Strand = Plus / Plus

                                                                       
Query: 308 gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 367
           ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | |
Sbjct: 85  gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 144

                                                                       
Query: 368 aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 427
           ||||  ||| ||||| ||||  ||||| | |  || || |||| |||||||||||| |||
Sbjct: 145 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 204

                                                                       
Query: 428 cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 487
           || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || |||
Sbjct: 205 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 264

                                                                       
Query: 488 ggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatggtttt 547
           ||||| |||||||||||  | || ||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcacgtatgatggccaagatgttgcagtgaagctgttggattggggagaagatggtttt 324

                                                          
Query: 548 gccacagaagccgaaactactgctttacgaacatcatttaagcagga 594
           ||||||||||| |||||| ||||||| || |||||||||||||||||
Sbjct: 325 gccacagaagctgaaactgctgctttgcggacatcatttaagcagga 371
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>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete
              sequence
          Length = 120254

 Score =  137 bits (69), Expect = 5e-29
 Identities = 165/197 (83%)
 Strand = Plus / Minus

                                                                          
Query: 308    gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 367
              ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | |
Sbjct: 109762 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 109703

                                                                          
Query: 368    aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 427
              ||||  ||| ||||| ||||  ||||| | |  || || |||| |||||||||||| |||
Sbjct: 109702 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 109643

                                                                          
Query: 428    cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 487
              || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || |||
Sbjct: 109642 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 109583

                               
Query: 488    ggcacctatgatggcca 504
              ||||| |||||||||||
Sbjct: 109582 ggcacgtatgatggcca 109566



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Minus

                                                                          
Query: 513    cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 572
              |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 107556 cagtgaagctgttggattggggagaagatggttttgccacagaagctgaaactgctgctt 107497

                                    
Query: 573    tacgaacatcatttaagcagga 594
              | || |||||||||||||||||
Sbjct: 107496 tgcggacatcatttaagcagga 107475
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  137 bits (69), Expect = 5e-29
 Identities = 165/197 (83%)
 Strand = Plus / Plus

                                                                            
Query: 308      gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 367
                ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | |
Sbjct: 24364195 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 24364254

                                                                            
Query: 368      aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 427
                ||||  ||| ||||| ||||  ||||| | |  || || |||| |||||||||||| |||
Sbjct: 24364255 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 24364314

                                                                            
Query: 428      cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 487
                || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || |||
Sbjct: 24364315 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 24364374

                                 
Query: 488      ggcacctatgatggcca 504
                ||||| |||||||||||
Sbjct: 24364375 ggcacgtatgatggcca 24364391



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                            
Query: 513      cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 572
                |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 24366401 cagtgaagctgttggattggggagaagatggttttgccacagaagctgaaactgctgctt 24366460

                                      
Query: 573      tacgaacatcatttaagcagga 594
                | || |||||||||||||||||
Sbjct: 24366461 tgcggacatcatttaagcagga 24366482
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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score =  137 bits (69), Expect = 5e-29
 Identities = 165/197 (83%)
 Strand = Plus / Minus

                                                                         
Query: 308   gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 367
             ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | |
Sbjct: 16429 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 16370

                                                                         
Query: 368   aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 427
             ||||  ||| ||||| ||||  ||||| | |  || || |||| |||||||||||| |||
Sbjct: 16369 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 16310

                                                                         
Query: 428   cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 487
             || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || |||
Sbjct: 16309 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 16250

                              
Query: 488   ggcacctatgatggcca 504
             ||||| |||||||||||
Sbjct: 16249 ggcacgtatgatggcca 16233



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Minus

                                                                         
Query: 513   cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 572
             |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 14223 cagtgaagctgttggattggggagaagatggttttgccacagaagctgaaactgctgctt 14164

                                   
Query: 573   tacgaacatcatttaagcagga 594
             | || |||||||||||||||||
Sbjct: 14163 tgcggacatcatttaagcagga 14142
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  137 bits (69), Expect = 5e-29
 Identities = 165/197 (83%)
 Strand = Plus / Plus

                                                                            
Query: 308      gtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctcaac 367
                ||||| |||||||||||||||||||||||||| || |||||||| ||| | ||||| | |
Sbjct: 24281664 gtgcgcgccgacaagatcgatctcaccagcctagatatccagctcgagaagcagcttacc 24281723

                                                                            
Query: 368      aagaaatggagcaagtccaacatcaagtcactgggacctaaggcggactgggagattgac 427
                ||||  ||| ||||| ||||  ||||| | |  || || |||| |||||||||||| |||
Sbjct: 24281724 aagacctggggcaaggccaatctcaaggcgcatggccccaaggaggactgggagatcgac 24281783

                                                                            
Query: 428      cttgctaagctggagatccggcacgtcatcgctcaggggacatatgggaccgtctaccgc 487
                || |||||||| ||||||||| ||||||| ||||||||||| || || ||||| || |||
Sbjct: 24281784 ctcgctaagctcgagatccggtacgtcattgctcaggggacctacggcaccgtgtatcgc 24281843

                                 
Query: 488      ggcacctatgatggcca 504
                ||||| |||||||||||
Sbjct: 24281844 ggcacgtatgatggcca 24281860



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                            
Query: 513      cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 572
                |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 24283870 cagtgaagctgttggattggggagaagatggttttgccacagaagctgaaactgctgctt 24283929

                                      
Query: 573      tacgaacatcatttaagcagga 594
                | || |||||||||||||||||
Sbjct: 24283930 tgcggacatcatttaagcagga 24283951
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>gb|AY105609.1| Zea mays PCO130861 mRNA sequence
          Length = 773

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 90/110 (81%)
 Strand = Plus / Plus

                                                                       
Query: 485 cgcggcacctatgatggccagcaagtcgcagtgaagctgttggattggggagaagatggt 544
           |||||||| |||||||| ||| | |||||||| || || ||||||||||| |||||||| 
Sbjct: 36  cgcggcacgtatgatgggcaggacgtcgcagtaaaactattggattggggtgaagatggc 95

                                                             
Query: 545 tttgccacagaagccgaaactactgctttacgaacatcatttaagcagga 594
           |||||  ||||| | |||||| |  |  | ||| ||||||||||||||||
Sbjct: 96  tttgcgtcagaaactgaaactgccacactgcgagcatcatttaagcagga 145
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>ref|NM_202754.1| Arabidopsis thaliana ATMRK1; kinase AT3G63260 (ATMRK1) transcript
           variant AT3G63260.2 mRNA, complete cds
          Length = 1490

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 505 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 564

            
Query: 567 c 567
           |
Sbjct: 565 c 565
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>ref|NM_116191.2| Arabidopsis thaliana ATMRK1; kinase AT3G63260 (ATMRK1) transcript
           variant AT3G63260.1 mRNA, complete cds
          Length = 1645

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 577 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 636

            
Query: 567 c 567
           |
Sbjct: 637 c 637
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>gb|AY117337.1| Arabidopsis thaliana putative ATMRK1 protein (At3g63260) mRNA,
           complete cds
          Length = 1207

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 317 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 376

            
Query: 567 c 567
           |
Sbjct: 377 c 377
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>gb|AY080717.1| Arabidopsis thaliana putative ATMRK1 protein (At3g63260) mRNA,
           complete cds
          Length = 1591

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 525 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 584

            
Query: 567 c 567
           |
Sbjct: 585 c 585
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>emb|BX822415.1|CNS0A793 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB36ZA04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1340

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 419 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 478

            
Query: 567 c 567
           |
Sbjct: 479 c 479
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>emb|BX823676.1|CNS0A6O3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS65ZG05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1356

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 499 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 558

            
Query: 567 c 567
           |
Sbjct: 559 c 559
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>emb|BX823523.1|CNS0A4WD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS47ZD06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1537

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 495 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 554

            
Query: 567 c 567
           |
Sbjct: 555 c 555
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>gb|AY086480.1| Arabidopsis thaliana clone 253505 mRNA, complete sequence
          Length = 1591

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 522 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 581

            
Query: 567 c 567
           |
Sbjct: 582 c 582
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>dbj|AB006810.1| Arabidopsis thaliana mRNA for ATMRK1, complete cds
          Length = 1626

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 507 aagtcgcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaacta 566
           |||||||||||||  |||| |||||||||||||||||||  ||||||  ||| |||||||
Sbjct: 576 aagtcgcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaacta 635

            
Query: 567 c 567
           |
Sbjct: 636 c 636
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>gb|AY738763.1| Carica papaya serine/threonine protein kinase 1 mRNA, partial cds
          Length = 606

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 524 ttggattggggagaagatggttttgccacag 554
           |||||||||||||| ||||||||||||||||
Sbjct: 55  ttggattggggagaggatggttttgccacag 85
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>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2
          Length = 75106

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 512   gcagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactac 567
             ||||||||  |||| |||||||||||||||||||  ||||||  ||| ||||||||
Sbjct: 42005 gcagtgaaagtgttagattggggagaagatggttacgccacaccagctgaaactac 41950
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>gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete sequence
          Length = 145314

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                          
Query: 513    cagtgaagctgttggattggggagaagatggttttgccacagaagccgaaactactgctt 572
              |||||||  ||||||||||||| || ||||||  |||||| |  || |||||| ||||||
Sbjct: 111581 cagtgaaagtgttggattggggtgaggatggtgctgccaccgctgcagaaactgctgctt 111640

                                    
Query: 573    tacgaacatcatttaagcagga 594
              ||||  |||| |||| ||||||
Sbjct: 111641 tacgtgcatcttttaggcagga 111662
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>dbj|AK109696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F01, full
           insert sequence
          Length = 1692

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 509 gtcgcagtgaagctgttggattgggg 534
           ||||||||||| ||||||||||||||
Sbjct: 466 gtcgcagtgaaactgttggattgggg 491
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>ref|XM_469711.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1224

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 478 cgtctaccgcggcacctatgatggccagcaagtcgcagtgaagctgttggattgggg 534
           |||||||||||||||||| || |||||  | ||||| |||||| || |||| |||||
Sbjct: 312 cgtctaccgcggcacctacgacggccatgacgtcgccgtgaaggtgctggactgggg 368
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>ref|XM_775936.1| PREDICTED: Strongylocentrotus purpuratus similar to CG11081-PA,
            isoform A (LOC575541), mRNA
          Length = 4581

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 352  ggagcaacagctcaacaagaa 372
            |||||||||||||||||||||
Sbjct: 4248 ggagcaacagctcaacaagaa 4268
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>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 57      ccgtcagctccacctctgctg 77
               |||||||||||||||||||||
Sbjct: 1384891 ccgtcagctccacctctgctg 1384871
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 278     aggaccgggagcttggggagcagcg 302
               |||||||||||||||| ||||||||
Sbjct: 4557121 aggaccgggagcttggcgagcagcg 4557097
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 322     gatcgatctcaccagcctcga 342
               |||||||||||||||||||||
Sbjct: 4462364 gatcgatctcaccagcctcga 4462344
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>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence
          Length = 204306

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 327    atctcaccagcctcgacatccagc 350
              |||||||||||||||| |||||||
Sbjct: 131792 atctcaccagcctcgagatccagc 131815
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>gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complete sequence
          Length = 181633

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   cagctggagcaacagctcaa 366
             ||||||||||||||||||||
Sbjct: 49398 cagctggagcaacagctcaa 49417
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>gb|AF142884.1| Uncultured archaeon DEEP-10 16S ribosomal RNA gene, partial
           sequence
          Length = 986

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 atctcaccagcctcgacatc 346
           ||||||||||||||||||||
Sbjct: 466 atctcaccagcctcgacatc 485
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>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete
             sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 327   atctcaccagcctcgacatccagc 350
             |||||||||||||||| |||||||
Sbjct: 13156 atctcaccagcctcgagatccagc 13179
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 539    gatggttttgccacagaagccgaa 562
              |||||||||||||| |||||||||
Sbjct: 841572 gatggttttgccaccgaagccgaa 841595
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>gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 217690

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ctggagcaacagctcaacaa 369
              ||||||||||||||||||||
Sbjct: 163559 ctggagcaacagctcaacaa 163540
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>emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, complete sequence
          Length = 203056

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    ctgcctgaggtgaaattcaa 276
              ||||||||||||||||||||
Sbjct: 184817 ctgcctgaggtgaaattcaa 184836
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>gb|S76788.1| orf {promoter-like sequence P116} [Lactobacillus paracasei, ssp.
           paracasei, CG11, Genomic, 155 nt]
          Length = 155

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 493 ctatgatggccagcaagtcg 512
           ||||||||||||||||||||
Sbjct: 123 ctatgatggccagcaagtcg 142
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>gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 of 118 of the complete
             sequence
          Length = 292632

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   cagctggagcaacagctcaa 366
             ||||||||||||||||||||
Sbjct: 79946 cagctggagcaacagctcaa 79927
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>dbj|AB009371.1| Mus musculus Tsc2 and Nthl1 genes for tuberin and homlogue of
            endonuclease III, complete cds
          Length = 11919

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 327  atctcaccagcctcgacatccagc 350
            |||||||||||||||| |||||||
Sbjct: 4442 atctcaccagcctcgagatccagc 4419
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>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence
          Length = 217058

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 45    cgcgcccccctcccgtcagctcca 68
             ||||||||||||||||||| ||||
Sbjct: 97982 cgcgcccccctcccgtcagttcca 98005
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>emb|AL591067.35| Mouse DNA sequence from clone RP23-333D2 on chromosome 11, complete
             sequence
          Length = 196512

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   tggccagcaagtcgcagtga 518
             ||||||||||||||||||||
Sbjct: 41799 tggccagcaagtcgcagtga 41818
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>emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chromosome 2, complete
              sequence
          Length = 201328

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 535    agaagatggttttgccacagaagc 558
              |||||||||||||||| |||||||
Sbjct: 166446 agaagatggttttgccccagaagc 166423


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,277,481
Number of Sequences: 3902068
Number of extensions: 4277481
Number of successful extensions: 71758
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71473
Number of HSP's gapped (non-prelim): 278
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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