ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal11h12 |
|---|---|
| Clone Library Name | barley_pub |
>FIEF_KLEPN (Q8RR17) Cation-efflux pump fieF| Length = 300 Score = 31.2 bits (69), Expect = 0.76 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +3 Query: 66 GTCPILHTKIEISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGPSA 212 G + +E+ PL+ H+I Q+ +I + PGS+V+ PS+ Sbjct: 240 GPTRFIQIHLEMEDNLPLVQAHVIADQVEQAILRRFPGSDVIIHQDPSS 288
>ASSY_LEGPH (Q5ZY78) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 405 Score = 30.8 bits (68), Expect = 0.99 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +1 Query: 4 YVERWSPDCKKFMDSYIDASWGHVLSCIPKSRFPGPV 114 Y RW K+ +D++ID + HV C+ F G + Sbjct: 315 YEGRWFSQTKQALDAFIDVTQQHVTGCVKLKLFKGNI 351
>ASSY_LEGPA (Q5X7P9) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 405 Score = 30.8 bits (68), Expect = 0.99 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +1 Query: 4 YVERWSPDCKKFMDSYIDASWGHVLSCIPKSRFPGPV 114 Y RW K+ +D++ID + HV C+ F G + Sbjct: 315 YEGRWFSQTKQALDAFIDVTQQHVTGCVKLKLFKGNI 351
>CTL1_TORMA (Q9I9B9) Choline transporter-like protein 1| Length = 646 Score = 30.4 bits (67), Expect = 1.3 Identities = 10/34 (29%), Positives = 21/34 (61%) Frame = +2 Query: 41 WIAILMLLGDMSYPAYQNRDFLDPSIAGSTPHHW 142 WIA+L+LL YP +++ +++ ++G + W Sbjct: 345 WIAVLLLLATAGYPQKKDQGYVEFKVSGPLQYTW 378
>FIEF_SHIFL (Q83PD6) Cation-efflux pump fieF| Length = 300 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/47 (25%), Positives = 24/47 (51%) Frame = +3 Query: 66 GTCPILHTKIEISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGP 206 G + +E+ + PL+ H++ Q+ +I + PGS+V+ P Sbjct: 240 GPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDP 286
>FIEF_ECOLI (P69380) Ferrous-iron efflux pump fieF| Length = 300 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/47 (25%), Positives = 24/47 (51%) Frame = +3 Query: 66 GTCPILHTKIEISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGP 206 G + +E+ + PL+ H++ Q+ +I + PGS+V+ P Sbjct: 240 GPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDP 286
>FIEF_ECOL6 (Q8FBD1) Ferrous-iron efflux pump fieF| Length = 300 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/47 (25%), Positives = 24/47 (51%) Frame = +3 Query: 66 GTCPILHTKIEISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGP 206 G + +E+ + PL+ H++ Q+ +I + PGS+V+ P Sbjct: 240 GPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDP 286
>FIEF_ECO57 (P69381) Ferrous-iron efflux pump fieF| Length = 300 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/47 (25%), Positives = 24/47 (51%) Frame = +3 Query: 66 GTCPILHTKIEISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGP 206 G + +E+ + PL+ H++ Q+ +I + PGS+V+ P Sbjct: 240 GPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDP 286
>NHR91_CAEEL (Q9U2R6) Nuclear hormone receptor family member nhr-91| Length = 474 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +3 Query: 96 EISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGPSAQR 218 EIS+T P ++ L+ ++ + + K +P V + +GP R Sbjct: 324 EISFTNPQVNLRLLQNRLSLVLGKEIPLEHVAKEAGPLVTR 364
>FIEF_SALPA (Q5PIR7) Cation-efflux pump fieF| Length = 300 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/47 (25%), Positives = 22/47 (46%) Frame = +3 Query: 66 GTCPILHTKIEISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGP 206 G + +E+ PL+ H + Q+ +I + PGS+V+ P Sbjct: 240 GPTRFIQIHLEMEDNLPLVQAHFVADQVEQAILRRFPGSDVIIHQDP 286
>YXCA_BACSU (P46332) Hypothetical protein yxcA| Length = 83 Score = 28.5 bits (62), Expect = 4.9 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 Query: 46 SYIDASWGHVLSCIPKSRFPGPVHCWI 126 ++++ASW ++L IP F PVH W+ Sbjct: 42 AFLNASWHNLLFLIPFGLFFYPVHIWM 68
>FIEF_SALTI (Q8Z2W4) Cation-efflux pump fieF| Length = 298 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/47 (25%), Positives = 22/47 (46%) Frame = +3 Query: 66 GTCPILHTKIEISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGP 206 G + +E+ PL+ H + Q+ +I + PGS+V+ P Sbjct: 238 GPTRFIQIHLEMEDNLPLVQAHFVADQVEQAILRRFPGSDVIIHQDP 284
>FIEF_SALTY (Q8ZKR4) Cation-efflux pump fieF| Length = 300 Score = 28.1 bits (61), Expect = 6.4 Identities = 12/47 (25%), Positives = 22/47 (46%) Frame = +3 Query: 66 GTCPILHTKIEISWTRPLLDQHLITGQIRISISKNLPGSEVVEGSGP 206 G + +E+ PL+ H + Q+ +I + PGS+V+ P Sbjct: 240 GPTRFIQIHLEMEDNLPLVQAHFVADQVEQAILQRFPGSDVIIHQDP 286
>IME2_YEAST (P32581) Meiosis induction protein kinase IME2/SME1 (EC 2.7.11.1)| Length = 645 Score = 28.1 bits (61), Expect = 6.4 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 5/43 (11%) Frame = +2 Query: 62 LGDM--SYPAYQNRDFLDPSIAGSTPH---HWPNSNQHFKKLT 175 LGD S P + R+FL P++ S H NSNQHF +T Sbjct: 602 LGDSFNSMPDFTPRNFLIPTLKKSREKFEPHLSNSNQHFGNVT 644
>SDHD_CHRVO (Q7NUP9) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 448 Score = 28.1 bits (61), Expect = 6.4 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +2 Query: 116 IAGSTPHHWPNSNQHFKKLTGLRSCGRF 199 I G T W S+ ++LTGLR C F Sbjct: 2 IHGKTLAEWQQSHPEIRELTGLRECAWF 29
>AL3B1_MOUSE (Q80VQ0) Aldehyde dehydrogenase 3B1 (EC 1.2.1.5) (Aldehyde| dehydrogenase 7) Length = 468 Score = 28.1 bits (61), Expect = 6.4 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Frame = +2 Query: 17 GHLIVRSSWIAILMLLGDMSYPAYQNRDFLDPSIAGSTPHHWPN-----SNQHFKKLTGL 181 G V +I + + PA QN G P PN + +HFK+L GL Sbjct: 241 GQTCVAPDYILCSQEMQERLVPALQNAI---TRFYGDNPQTSPNLGRIINQKHFKRLQGL 297 Query: 182 RSCGR 196 CGR Sbjct: 298 LGCGR 302
>NIA_USTMA (Q05531) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 908 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +2 Query: 71 MSYPAYQNRDFLDPSIA-GSTPHHWPNSNQHFKKLTG 178 MSYP Q R + P + +TP HW ++ +LTG Sbjct: 1 MSYPPSQPRKAVQPLTSDANTPDHWIARDERMIRLTG 37
>ATS4_RAT (Q9ESP7) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and| metalloproteinase with thrombospondin motifs 4) (ADAM-TS 4) (ADAM-TS4) (Aggrecanase 1) (Fragment) Length = 630 Score = 27.7 bits (60), Expect = 8.4 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 Query: 10 ERWSPDCKKFMDSYIDASWGHVLSCIPKSRFPGPV 114 E WSP +F+ ++D +GH L P++ PV Sbjct: 195 EPWSPCSARFITDFLDNGYGHCLLDKPEAPLHLPV 229
>ATS4_HUMAN (O75173) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and| metalloproteinase with thrombospondin motifs 4) (ADAM-TS 4) (ADAM-TS4) (Aggrecanase 1) (ADMP-1) Length = 837 Score = 27.7 bits (60), Expect = 8.4 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 Query: 10 ERWSPDCKKFMDSYIDASWGHVLSCIPKSRFPGPV 114 E WSP +F+ ++D +GH L P++ PV Sbjct: 402 EPWSPCSARFITDFLDNGYGHCLLDKPEAPLHLPV 436 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,124,531 Number of Sequences: 219361 Number of extensions: 674126 Number of successful extensions: 1876 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1862 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1876 length of database: 80,573,946 effective HSP length: 51 effective length of database: 69,386,535 effective search space used: 1665276840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
