>ref|XM_480832.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2180

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 184  aagttgtggaaggttccggaccctcagct 212
            ||||| |||||||||||| ||||||||||
Sbjct: 1545 aagttttggaaggttccgaaccctcagct 1573

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 184     aagttgtggaaggttccggaccctcagct 212
               ||||| |||||||||||| ||||||||||
Sbjct: 8056513 aagttttggaaggttccgaaccctcagct 8056541

>dbj|AP004559.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0461A06
          Length = 136384

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 184    aagttgtggaaggttccggaccctcagct 212
              ||||| |||||||||||| ||||||||||
Sbjct: 128683 aagttttggaaggttccgaaccctcagct 128711

>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1047A05
          Length = 157517

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 184   aagttgtggaaggttccggaccctcagct 212
             ||||| |||||||||||| ||||||||||
Sbjct: 24824 aagttttggaaggttccgaaccctcagct 24852

>dbj|AK100248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059K19, full
            insert sequence
          Length = 2179

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 184  aagttgtggaaggttccggaccctcagct 212
            ||||| |||||||||||| ||||||||||
Sbjct: 1544 aagttttggaaggttccgaaccctcagct 1572

>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 152     aatcagcatttcaaaaaact 171
               ||||||||||||||||||||
Sbjct: 3086124 aatcagcatttcaaaaaact 3086105

>gb|AC161435.7| Mus musculus chromosome 8, clone RP23-78L21, complete sequence
          Length = 219937

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 199  ccggaccctcagctcagaga 218
            ||||||||||||||||||||
Sbjct: 7134 ccggaccctcagctcagaga 7115

>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06,
             complete sequence
          Length = 136143

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 180   tcagaagttgtggaaggttccggaccctcagctcag 215
             ||||||| | |||||||||||| ||||| |||||||
Sbjct: 13779 tcagaagctatggaaggttccgaaccctgagctcag 13814

>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence
          Length = 210003

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    ccggaccctcagctcagaga 218
              ||||||||||||||||||||
Sbjct: 105463 ccggaccctcagctcagaga 105444

>gb|AF200692.2| Shigella flexneri 2a she pathogenicity island, complete sequence
          Length = 51334

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   aatcagcatttcaaaaaact 171
             ||||||||||||||||||||
Sbjct: 34571 aatcagcatttcaaaaaact 34552

>emb|CR712009.2|CNS0GCC5 Tetraodon nigroviridis full-length cDNA
          Length = 850

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 tccggaccctcagctcagag 217
           ||||||||||||||||||||
Sbjct: 448 tccggaccctcagctcagag 429

>emb|CR709108.2|CNS0GA3K Tetraodon nigroviridis full-length cDNA
          Length = 1130

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 tccggaccctcagctcagag 217
           ||||||||||||||||||||
Sbjct: 175 tccggaccctcagctcagag 156

>gb|AC154217.2| Mus musculus BAC clone RP24-357L19 from chromosome 17, complete
             sequence
          Length = 183535

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    gatgcttcttggggacatgt 74
             ||||||||||||||||||||
Sbjct: 93734 gatgcttcttggggacatgt 93715

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 180      tcagaagttgtggaaggttccggaccctcagctcag 215
                ||||||| | |||||||||||| ||||| |||||||
Sbjct: 17637021 tcagaagctatggaaggttccgaaccctgagctcag 17637056

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 47       gctatattgatgcttcttgg 66
                ||||||||||||||||||||
Sbjct: 16654397 gctatattgatgcttcttgg 16654416

>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 152     aatcagcatttcaaaaaact 171
               ||||||||||||||||||||
Sbjct: 3076954 aatcagcatttcaaaaaact 3076935

>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0091C16
          Length = 162527

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    gctatattgatgcttcttgg 66
             ||||||||||||||||||||
Sbjct: 31452 gctatattgatgcttcttgg 31471

>dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0519B12
          Length = 147542

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    gctatattgatgcttcttgg 66
             ||||||||||||||||||||
Sbjct: 96364 gctatattgatgcttcttgg 96383

>dbj|AK064110.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G07, full
            insert sequence
          Length = 1627

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 180  tcagaagttgtggaaggttccggaccctcagctcag 215
            ||||||| | |||||||||||| ||||| |||||||
Sbjct: 1196 tcagaagctatggaaggttccgaaccctgagctcag 1231


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,846,742
Number of Sequences: 3902068
Number of extensions: 1846742
Number of successful extensions: 147698
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147526
Number of HSP's gapped (non-prelim): 172
length of query: 227
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 205
effective length of database: 17,147,199,772
effective search space: 3515175953260
effective search space used: 3515175953260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)