ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal11g05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 942 bits (475), Expect = 0.0 Identities = 558/581 (96%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 160 ctgcagtccgacatcaggg-aggtcgcaagcaagtgcgccgacgccgccaagatggccgg 218 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 219 cttcgccctcgccacctctgccctcctcgtctccggcgcgacggcggagggggcgcccaa 278 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 gaggctgaccttcgacgagatccagagcaagacctacatggaggtgaagggtaccggcac 338 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 398 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 458 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 459 ccagaagaacgagccgccgcgcttccagaagaccaagctcatgacccgtctcacctacac 518 Query: 362 ccttgacgagatggaaggcccgctcgaggt-cggcgccgacggcaccctcaagttcgagg 420 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 519 ccttgacgagatggaaggcccgctcgaggtacggcgccgacgg-accctcaagttcgagg 577 Query: 421 agaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgc 480 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 578 agaaggacggcatcgactacgcggccgtcaccgtgcagctccccggaggcgagcgcgttg 637 Query: 481 cgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggc 540 | ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 638 ccttcctcttcaccgtcaagcagctcgtcgccaccggcaagcccgagagcttca---ggc 694 Query: 541 ccttcctcgtgcccagctacaggggttcctctttcctcgac 581 |||||||||||||||||||||||||||| |||||||||||| Sbjct: 695 ccttcctcgtgcccagctacaggggttcgtctttcctcgac 735
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 587 bits (296), Expect = e-164 Identities = 510/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 154 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 212 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 213 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 272 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 273 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 332 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 333 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 392 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 393 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 452 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 453 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 512 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 513 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 572 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 573 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 632 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 633 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 692 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 693 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 732
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 587 bits (296), Expect = e-164 Identities = 510/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 226 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 284 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 285 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 344 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 345 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 404 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 405 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 464 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 465 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 524 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 525 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 584 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 585 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 644 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 645 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 704 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 705 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 764 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 765 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 804
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 587 bits (296), Expect = e-164 Identities = 510/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 223 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 281 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 282 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 341 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 342 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 401 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 402 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 461 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 462 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 521 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 522 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 581 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 582 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 641 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 642 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 701 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 702 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 761 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 762 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 801
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 587 bits (296), Expect = e-164 Identities = 510/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 203 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 261 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 262 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 321 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 322 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 381 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 382 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 441 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 442 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 501 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 502 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 561 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 562 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 621 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 622 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 681 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 682 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 741 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 742 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 781
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 587 bits (296), Expect = e-164 Identities = 510/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 203 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 261 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 262 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 321 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 322 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 381 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 382 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 441 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 442 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 501 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 502 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 561 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 562 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 621 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 622 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 681 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 682 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 741 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 742 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 781
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 579 bits (292), Expect = e-162 Identities = 509/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 219 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 277 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 278 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 337 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 338 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 397 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| ||||||||||| |||| Sbjct: 398 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccagcaa 457 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 458 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 517 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 518 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 577 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 578 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 637 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 638 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 697 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 698 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 757 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 758 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 797
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 579 bits (292), Expect = e-162 Identities = 509/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 206 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 264 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 265 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 324 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 325 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 384 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 385 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 444 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 445 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 504 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 505 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 564 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || | ||||| ||| ||||||||||||| Sbjct: 565 cctcgacgagatcgagggcccgctcgaggtcagctctgacggaaccatcaagttcgagga 624 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 625 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 684 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 685 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 744 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 745 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 784
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 579 bits (292), Expect = e-162 Identities = 509/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 228 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 286 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 287 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 346 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 347 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 406 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 407 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 466 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 467 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 526 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 527 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 586 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 587 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 646 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||| ||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 647 gaatgacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 706 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 707 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 766 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 767 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 806
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 571 bits (288), Expect = e-160 Identities = 508/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 223 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 281 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 282 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 341 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 342 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 401 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 402 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 461 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 462 gtacagcatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 521 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 522 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 581 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 582 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 641 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| | ||||||||||||||||| Sbjct: 642 gaaggacggaatcgactacgccgccgtcaccgtgcagctgctgggaggcgagcgcgtgcc 701 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 702 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 761 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 762 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 801
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 571 bits (288), Expect = e-160 Identities = 508/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 223 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 281 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 282 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 341 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 342 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 401 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 402 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 461 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 462 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 521 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| | |||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 522 ggccaagaacgcgtcacccgagttccagaagaccaagctcatgacccgcctgacctacac 581 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| | ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 582 cctcgacgagatcaagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 641 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 642 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 701 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||||| | || ||||||||||||||||||||||||||| ||||||| Sbjct: 702 gttcctcttcaccatcaagaatctggtcgccaccggcaagccggagagcttcggcgggcc 761 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 762 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 801
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 563 bits (284), Expect = e-157 Identities = 508/580 (87%), Gaps = 2/580 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 227 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 285 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||| | ||||| || |||||||| | ||| | Sbjct: 286 cttcgccctcgccacctcagctctgctcgtc-cgggcgccagcgcggagggcgtgccgag 344 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 345 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 404 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 405 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 464 Query: 242 gtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcat 301 |||| | ||||||||||||||||||||||| || ||||||||||| ||||| |||||| | Sbjct: 465 gtacaacatgaagaagttctgcctggagccgacgtccttcaccgttaaggcggagggcgt 524 Query: 302 ccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttacac 361 ||||||| |||||| | |||||||||||||||||||||||||| || || ||||| Sbjct: 525 ggccaagaacgcgccacccgagttccagaagaccaagctcatgacccgcctgacctacac 584 Query: 362 ccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgagga 421 ||| |||||||| || ||||||||||||||| || ||||||| ||| ||||||||||||| Sbjct: 585 cctcgacgagatcgagggcccgctcgaggtcagctccgacggaaccatcaagttcgagga 644 Query: 422 gaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgcc 481 ||||||||| ||||||||||| |||||||| |||||||| || ||||||||||||||||| Sbjct: 645 gaaggacggaatcgactacgccgccgtcaccgtgcagctgccgggaggcgagcgcgtgcc 704 Query: 482 gttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcgggcc 541 ||||||||||||| ||| | | || ||||||||||||||||||||||||||| ||||||| Sbjct: 705 gttcctcttcaccatcatgaatctggtcgccaccggcaagccggagagcttcggcgggcc 764 Query: 542 cttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||| | ||||| || ||||||||| Sbjct: 765 cttcctcgtgcccagctaccgtggttcgtccttcctcgac 804
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 559 bits (282), Expect = e-156 Identities = 417/462 (90%) Strand = Plus / Plus Query: 120 aagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggc 179 ||||||||||||| |||||| ||||||||||| || ||||||||||||||||| || ||| Sbjct: 593 aagaggctgacctacgacgagatccagagcaaaacgtacatggaggtgaagggcacgggc 652 Query: 180 accgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggc 239 || |||||||||||||||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 653 acggcgaaccagtgcccgaccatcgacggcggcgtggagtcgttcccgttcaaggccggc 712 Query: 240 aagtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggc 299 |||||| ||||||||||| | ||||||||||| || ||||||||||||||||| |||||| Sbjct: 713 aagtaccagatgaagaagctgtgcctggagccgacgtccttcaccgtcaaggcggagggc 772 Query: 300 atccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttac 359 ||| ||||||| || || | |||||||||||||||||||||||||| ||||| ||| Sbjct: 773 atcgccaagaacgccccgcccgagttccagaagaccaagctcatgacccgcctcacgtac 832 Query: 360 acccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgag 419 || || |||||||| || |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 833 acgctggacgagatcgagggcccgctcgaggtcggctccgacggcacgctcaagttcgag 892 Query: 420 gagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtg 479 ||||||||||||||||||||||| |||||||| ||||||||||| | |||||||||||| Sbjct: 893 gagaaggacggcatcgactacgccgccgtcaccgtgcagctcccggcgggcgagcgcgtg 952 Query: 480 ccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcggg 539 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 953 ccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagcccgagagcttcggcggg 1012 Query: 540 cccttcctcgtgcccagctacaggggttcctctttcctcgac 581 ||||||||||||||||||||| | || ||||| ||||||||| Sbjct: 1013 cccttcctcgtgcccagctaccgtggctcctccttcctcgac 1054 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 24 gtcgcaagcaagtgcgccgacgccgccaagatggccggcttcgccctcgcaacctctgcc 83 ||||| |||| ||||| ||||||||| ||| | ||||||||||| ||||| ||||| || Sbjct: 497 gtcgccagcaggtgcgtcgacgccgcgaagctcgccggcttcgcgctcgccacctcggcg 556 Query: 84 ctcctcgtc 92 ||||||||| Sbjct: 557 ctcctcgtc 565
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 511 bits (258), Expect = e-142 Identities = 429/486 (88%) Strand = Plus / Plus Query: 96 ggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacc 155 ||||| || |||||||| | ||| | |||||| ||||||||||| || ||||| ||||| Sbjct: 17345883 ggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgagattcagagtaagacg 17345942 Query: 156 tacatggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcggcgtc 215 ||||||||||||||||| |||||||| ||||||||||||||||| | || ||||||||| Sbjct: 17345943 tacatggaggtgaagggaaccggcacggcgaaccagtgcccgacggtggagggcggcgtc 17346002 Query: 216 gactccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagcccacc 275 ||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 17346003 gactccttcgccttcaaggccggcaagtacaacatgaagaagttctgcctggagccgacg 17346062 Query: 276 tccttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccagaagacc 335 ||||||||||| ||||| |||||| | ||||||| |||||| | |||||||||||| Sbjct: 17346063 tccttcaccgttaaggcggagggcgtggccaagaacgcgccacccgagttccagaagacc 17346122 Query: 336 aagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgaggtcggc 395 |||||||||||||| || || |||||||| |||||||| || ||||||||||||||| || Sbjct: 17346123 aagctcatgacccgcctgacctacaccctcgacgagatcgagggcccgctcgaggtcagc 17346182 Query: 396 gccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcacagtg 455 ||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 17346183 tccgacggaaccatcaagttcgaggagaaggacggaatcgactacgccgccgtcaccgtg 17346242 Query: 456 cagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccacc 515 ||||| || |||||||||||||||||||||||||||||| ||||| | || ||||||||| Sbjct: 17346243 cagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaagaatctggtcgccacc 17346302 Query: 516 ggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggttcctctttc 575 |||||||||||||||||| |||||||||||||||||||||||||| | ||||| || ||| Sbjct: 17346303 ggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggttcgtccttc 17346362 Query: 576 ctcgac 581 |||||| Sbjct: 17346363 ctcgac 17346368 Score = 81.8 bits (41), Expect = 2e-12 Identities = 81/93 (87%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 17345673 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 17345731 Query: 62 cttcgccctcgcaacctctgccctcctcgtctc 94 |||||||||||| ||||| || || |||||||| Sbjct: 17345732 cttcgccctcgccacctcagctctgctcgtctc 17345764
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 511 bits (258), Expect = e-142 Identities = 429/486 (88%) Strand = Plus / Plus Query: 96 ggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacc 155 ||||| || |||||||| | ||| | |||||| ||||||||||| || ||||| ||||| Sbjct: 112144 ggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgagattcagagtaagacg 112203 Query: 156 tacatggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcggcgtc 215 ||||||||||||||||| |||||||| ||||||||||||||||| | || ||||||||| Sbjct: 112204 tacatggaggtgaagggaaccggcacggcgaaccagtgcccgacggtggagggcggcgtc 112263 Query: 216 gactccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagcccacc 275 ||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 112264 gactccttcgccttcaaggccggcaagtacaacatgaagaagttctgcctggagccgacg 112323 Query: 276 tccttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccagaagacc 335 ||||||||||| ||||| |||||| | ||||||| |||||| | |||||||||||| Sbjct: 112324 tccttcaccgttaaggcggagggcgtggccaagaacgcgccacccgagttccagaagacc 112383 Query: 336 aagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgaggtcggc 395 |||||||||||||| || || |||||||| |||||||| || ||||||||||||||| || Sbjct: 112384 aagctcatgacccgcctgacctacaccctcgacgagatcgagggcccgctcgaggtcagc 112443 Query: 396 gccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcacagtg 455 ||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 112444 tccgacggaaccatcaagttcgaggagaaggacggaatcgactacgccgccgtcaccgtg 112503 Query: 456 cagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccacc 515 ||||| || |||||||||||||||||||||||||||||| ||||| | || ||||||||| Sbjct: 112504 cagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaagaatctggtcgccacc 112563 Query: 516 ggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggttcctctttc 575 |||||||||||||||||| |||||||||||||||||||||||||| | ||||| || ||| Sbjct: 112564 ggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggttcgtccttc 112623 Query: 576 ctcgac 581 |||||| Sbjct: 112624 ctcgac 112629 Score = 81.8 bits (41), Expect = 2e-12 Identities = 81/93 (87%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 111934 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 111992 Query: 62 cttcgccctcgcaacctctgccctcctcgtctc 94 |||||||||||| ||||| || || |||||||| Sbjct: 111993 cttcgccctcgccacctcagctctgctcgtctc 112025
>gb|AF037457.1|AF037457 Fritillaria agrestis photosystem II oxygen evolving complex protein 1 precursor (psbO) mRNA, complete cds Length = 1140 Score = 343 bits (173), Expect = 4e-91 Identities = 452/545 (82%) Strand = Plus / Plus Query: 33 aagtgcgccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtc 92 |||||| |||| ||||||||| | ||||||||||||||||| || ||||||||| || || Sbjct: 208 aagtgcaccgatgccgccaagctcgccggcttcgccctcgccacatctgccctcgtcatc 267 Query: 93 tctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaag 152 || || ||||| || ||||| | ||| |||||||||||||| || || |||||||||||| Sbjct: 268 tcgggagcaagcgctgagggagtgccgaagaggctgacctttgatgagatccagagcaag 327 Query: 153 acctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcggc 212 |||||||||||||||||||| | ||| || ||||| ||||||||||||||||| ||||| Sbjct: 328 acctacatggaggtgaagggcagcgggactgcgaatcagtgcccgaccatcgagggcggg 387 Query: 213 gtcgactccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagccc 272 || |||||| || |||| ||||||||||| ||||||| ||||||| |||||| Sbjct: 388 actgagtccttcggctacaagaccggcaagtacaccctgaagaaactctgccttgagccc 447 Query: 273 acctccttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccagaag 332 ||||||||||||||||| || ||||||||| | || |||| || || | |||||||| Sbjct: 448 acctccttcaccgtcaaagctgagggcatcaacaaaaacgcaccccctgagttccagaaa 507 Query: 333 accaagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgaggtc 392 || ||||| |||||||| ||||| ||||| ||||||||||| || || || ||||||| Sbjct: 508 actaagctaatgacccgcctcacctacactcttgacgagattgagggacccttcgaggtt 567 Query: 393 ggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcaca 452 | | | ||||| || ||||||||||||||||||| || || |||||||| || || ||| Sbjct: 568 gcccctgacggtactgtcaagttcgaggagaaggatggtattgactacgcagctgtaaca 627 Query: 453 gtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgcc 512 |||||||| || ||||| ||||| ||||||||| | |||||||| |||||||| || || Sbjct: 628 gtgcagctgcctggaggggagcgtgtgccgttcttgttcaccgtgaagcagctggtggct 687 Query: 513 accggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggttcctct 572 ||||| ||||||||||||||||||||| | | ||||||||| |||||| ||||||| || Sbjct: 688 accgggaagccggagagcttcagcgggtcgtacctcgtgccgagctaccggggttcgtcg 747 Query: 573 ttcct 577 ||||| Sbjct: 748 ttcct 752
>dbj|AK062941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-B10, full insert sequence Length = 620 Score = 230 bits (116), Expect = 4e-57 Identities = 213/244 (87%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 2 ctgcaatccgacatcagggnaggtcgcaagcaagtgcgccgacgccgccaagatggccgg 61 ||||| ||||||||| ||| ||||||| | |||||||||||| ||||||||| | ||||| Sbjct: 218 ctgcagtccgacatccggg-aggtcgccaacaagtgcgccgatgccgccaagctcgccgg 276 Query: 62 cttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaa 121 |||||||||||| ||||| || || |||||||| ||||| || |||||||| | ||| | Sbjct: 277 cttcgccctcgccacctcagctctgctcgtctcgggcgccagcgcggagggcgtgccgag 336 Query: 122 gaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcac 181 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 337 gaggcttaccttcgacgagattcagagtaagacgtacatggaggtgaagggaaccggcac 396 Query: 182 cgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaa 241 ||||||||||||||||| | || |||||||||||||||||| |||||||||||||||| Sbjct: 397 ggcgaaccagtgcccgacggtggagggcggcgtcgactccttcgccttcaaggccggcaa 456 Query: 242 gtac 245 |||| Sbjct: 457 gtac 460
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 176 bits (89), Expect = 5e-41 Identities = 323/401 (80%) Strand = Plus / Minus Query: 99 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 158 ||||||||||| || || || |||||||| |||||||| ||||||||||||||||| ||| Sbjct: 67315 gcaagtgcggaaggtgctccgaagaggctaaccttcgatgaaatccagagcaagacatac 67256 Query: 159 atggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcggcgtcgac 218 ||||| |||||||| ||||| ||||| ||||||||||| ||||| || || || || || Sbjct: 67255 atggaagtgaagggaaccggaaccgcaaaccagtgccccaccattgaagggggagtggaa 67196 Query: 219 tccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagcccacctcc 278 || || ||||||||||||| |||||| | |||||||||||||| || ||||| || Sbjct: 67195 tcattttccttcaaggccgggaagtacaatgccaagaagttctgccttgaacccacttca 67136 Query: 279 ttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccagaagaccaag 338 ||||| || ||||| ||||| | ||||||| |||| | ||||| || |||||| Sbjct: 67135 ttcacagtgaaggcagagggagtagccaagaacgccccacttgagttccaaaacaccaag 67076 Query: 339 ctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgaggtcggcgcc 398 |||||||| ||||| || |||||||| |||||||| ||||| || | ||||| | | Sbjct: 67075 ctcatgacacgtctgacctacaccctcgacgagatcgaaggaccctttgaggtttcctct 67016 Query: 399 gacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcag 458 || ||||| |||||||||||||||| || ||||| |||||||| || |||||||| ||| Sbjct: 67015 gatggcactgtcaagttcgaggagaaagatggcattgactacgctgctgtcacagttcag 66956 Query: 459 ctccccggaggcgagcgcgtgccgttcctcttcaccgtcaa 499 || ||||| |||||||| || || ||||| |||||| |||| Sbjct: 66955 cttcccggtggcgagcgtgttccattccttttcaccatcaa 66915
>gb|AF139818.1|AF139818 Brassica napus 33 kDa oxygen evolving protein of photosystem II (psbo) mRNA, complete cds Length = 1247 Score = 137 bits (69), Expect = 5e-29 Identities = 288/361 (79%) Strand = Plus / Plus Query: 31 gcaagtgcgccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcg 90 |||| ||| ||||||| | |||||| ||||| || || || ||||||||||| ||| ||| Sbjct: 185 gcaaatgctccgacgctgtcaagatcgccggatttgcgctagcaacctctgctctcgtcg 244 Query: 91 tctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagca 150 |||| || |||||||| || || || || ||||| |||| | ||| || || ||||||| Sbjct: 245 tctcgggagcaagtgcagaaggagctccgaagagattgacttacgatgagatacagagca 304 Query: 151 agacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcg 210 |||| |||||||| |||||||| || || ||||| ||||||||||| ||||| ||||| | Sbjct: 305 agacatacatggaagtgaagggaactggaaccgccaaccagtgcccaaccattgacggtg 364 Query: 211 gcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagc 270 || || | ||| ||||||| | || ||||||| |||||||||||| | |||| Sbjct: 365 gctctgagactttctccttcaaaccgggaaagtacgccggcaagaagttctgcttcgagc 424 Query: 271 ccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccaga 330 | || ||||||||||||||||| ||| | | ||||||| || || | |||||||| Sbjct: 425 ctacttccttcaccgtcaaggctgagagtgttagcaagaacgcacctcctgacttccaga 484 Query: 331 agaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgagg 390 | ||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 485 acaccaagctcatgacccgtctcacctacactcttgacgagatcgaaggccccttcgagg 544 Query: 391 t 391 | Sbjct: 545 t 545
>ref|NM_114942.2| Arabidopsis thaliana PSBO-2/PSBO2; oxygen evolving AT3G50820 (PSBO-2/PSBO2) mRNA, complete cds Length = 1243 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 512 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 571 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 572 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 631 Query: 372 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 431 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 632 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 691 Query: 432 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 491 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 692 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 751 Query: 492 accgtcaagcagctcg 507 || || |||||||||| Sbjct: 752 acggttaagcagctcg 767 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 300 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 359 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 | |||||||||| || || |||||||| || | |||||| || ||||||||||| |||| Sbjct: 360 ccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttaca 419 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtg 193 ||||||| ||||||||||| || || |||||||| Sbjct: 420 tggaggtaaagggtaccggtacggcaaaccagtg 453
>gb|BT015545.1| Arabidopsis thaliana At3g50820 mRNA sequence Length = 738 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 139 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 198 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 199 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 258 Query: 372 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 431 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 259 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 318 Query: 432 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 491 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 319 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 378 Query: 492 accgtcaagcagctcg 507 || || |||||||||| Sbjct: 379 acggttaagcagctcg 394 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 120 aagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggc 179 |||||||| || | |||||| || ||||||||||| ||||||||||| ||||||||||| Sbjct: 7 aagaggctaacgtacgacgagatacagagcaagacttacatggaggtaaagggtaccggt 66 Query: 180 accgcgaaccagtg 193 || || |||||||| Sbjct: 67 acggcaaaccagtg 80
>gb|AY116934.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 996 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 397 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 456 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 457 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 516 Query: 372 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 431 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 517 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 576 Query: 432 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 491 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 577 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 636 Query: 492 accgtcaagcagctcg 507 || || |||||||||| Sbjct: 637 acggttaagcagctcg 652 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 185 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 244 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 | |||||||||| || || |||||||| || | |||||| || ||||||||||| |||| Sbjct: 245 ccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttaca 304 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtg 193 ||||||| ||||||||||| || || |||||||| Sbjct: 305 tggaggtaaagggtaccggtacggcaaaccagtg 338
>gb|AY050362.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 1127 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 455 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 514 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 515 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 574 Query: 372 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 431 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 575 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 634 Query: 432 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 491 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 635 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 694 Query: 492 accgtcaagcagctcg 507 || || |||||||||| Sbjct: 695 acggttaagcagctcg 710 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 243 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 302 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 | |||||||||| || || |||||||| || | |||||| || ||||||||||| |||| Sbjct: 303 ccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttaca 362 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtg 193 ||||||| ||||||||||| || || |||||||| Sbjct: 363 tggaggtaaagggtaccggtacggcaaaccagtg 396
>emb|BX823920.1|CNS0A6OQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1067 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 403 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 462 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 463 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 522 Query: 372 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 431 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 523 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 582 Query: 432 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 491 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 583 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 642 Query: 492 accgtcaagcagctcg 507 || || |||||||||| Sbjct: 643 acggttaagcagctcg 658 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 191 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 250 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 | |||||||||| || || |||||||| || | |||||| || ||||||||||| |||| Sbjct: 251 ccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttaca 310 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtg 193 ||||||| ||||||||||| || || |||||||| Sbjct: 311 tggaggtaaagggtaccggtacggcaaaccagtg 344
>gb|AY088799.1| Arabidopsis thaliana clone 95531 mRNA, complete sequence Length = 1189 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 512 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 571 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 572 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 631 Query: 372 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 431 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 632 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 691 Query: 432 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 491 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 692 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 751 Query: 492 accgtcaagcagctcg 507 || || |||||||||| Sbjct: 752 acggttaagcagctcg 767 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 300 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 359 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 | |||||||||| || || |||||||| || | |||||| || ||||||||||| |||| Sbjct: 360 ccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttaca 419 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtg 193 ||||||| ||||||||||| || || |||||||| Sbjct: 420 tggaggtaaagggtaccggtacggcaaaccagtg 453
>emb|AJ145957.1|ATH145957 Arabidopsis thaliana mRNA for precursor of the 33 kDa subunit of the oxygen evolving complex (psbO2 gene) Length = 1159 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 433 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 492 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 493 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 552 Query: 372 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 431 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 553 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 612 Query: 432 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 491 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 613 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 672 Query: 492 accgtcaagcagctcg 507 || || |||||||||| Sbjct: 673 acggttaagcagctcg 688 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 221 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 280 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 | |||||||||| || || |||||||| || | |||||| || ||||||||||| |||| Sbjct: 281 ccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttaca 340 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtg 193 ||||||| ||||||||||| || || |||||||| Sbjct: 341 tggaggtaaagggtaccggtacggcaaaccagtg 374
>emb|BX822412.1|CNS0A77V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 105 bits (53), Expect = 2e-19 Identities = 207/257 (80%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 417 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 476 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || |||||||||||||||||||| |||||||| || || ||| Sbjct: 477 gcaccgccggatttccaaaacaccaagctcatgacccgtcttacttacacactcgatgag 536 Query: 372 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 431 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 537 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 596 Query: 432 atcgactacgcggccgtcacagtgc-agctccccggaggcgagcgcgtgccgttcctctt 490 ||||| ||||| || |||||||||| |||| || ||||| || ||||||||||||||||| Sbjct: 597 atcgattacgcagcagtcacagtgccagcttccgggaggagaacgcgtgccgttcctctt 656 Query: 491 caccgtcaagcagctcg 507 ||| || |||||||||| Sbjct: 657 cacggttaagcagctcg 673 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 |||||||||||||||| ||||| || || || || |||||||| ||| | ||||| || | Sbjct: 205 ccgacgccgccaagatcgccggttttgctctagccacctctgctctcgttgtctcggggg 264 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 | |||||||||| || || |||||||| || | |||||| || ||||||||||| |||| Sbjct: 265 ccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttaca 324 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtg 193 ||||||| ||||||||||| || || |||||||| Sbjct: 325 tggaggtaaagggtaccggtacggcaaaccagtg 358
>emb|BX823297.1|CNS0A6KS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 103 bits (52), Expect = 6e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcccg 383 ||||| || ||||||||||||||||||||||||||||| || || ||||| ||||| || Sbjct: 36 ttccaaaacaccaagctcatgacccgtctcacttacacactcgatgagatcgaaggaccc 95 Query: 384 ctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcg 443 ||||||| || | ||||| | | | |||||| |||| | || || ||||| ||||| Sbjct: 96 ttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggtatcgattacgca 155 Query: 444 gccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcag 503 || |||||||| ||||| || ||||| || |||||||||||||||||||| || |||||| Sbjct: 156 gcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttcacggttaagcag 215 Query: 504 ctcg 507 |||| Sbjct: 216 ctcg 219
>dbj|AP006540.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01C03, TM0559, complete sequence Length = 80535 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 417 gaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgc 476 |||||||| || ||||| ||||| || || |||||||| ||||||||||||||||||||| Sbjct: 73173 gaggagaaagatggcattgactatgctgctgtcacagtccagctccccggaggcgagcgc 73232 Query: 477 gtgccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagctt 532 ||||| ||||||||||||||||| ||| | || || |||| ||||| |||||||| Sbjct: 73233 gtgcctttcctcttcaccgtcaaacagttggtggcatccgggaagcctgagagctt 73288 Score = 93.7 bits (47), Expect = 6e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 124 ggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccg 183 ||||||||||||| ||||||||||||||||| |||||||| |||||||| || || || | Sbjct: 72880 ggctgaccttcgatgaaatccagagcaagacatacatggaagtgaagggaactggaactg 72939 Query: 184 cgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccgg 238 | ||||||||||| ||||| || || || || ||||| ||| | ||||||||||| Sbjct: 72940 ctaaccagtgcccaaccattgaaggtggagtggactcattcgcgttcaaggccgg 72994
>gb|AY456395.1| 'Chlorella' ellipsoidea oxygen-evolving enhancer protein 1 mRNA, partial cds Length = 817 Score = 101 bits (51), Expect = 3e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 418 aggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcg 477 ||||| ||||||||||||||||||| |||||||| ||||| | |||||||||||||| | Sbjct: 92 aggaggaggacggcatcgactacgccgccgtcaccgtgcanatgcccggaggcgagcgtg 151 Query: 478 tgccgttcctcttcaccgtcaagcagctcg 507 |||| |||||||||||| ||||| |||||| Sbjct: 152 tgcccttcctcttcaccatcaaggagctcg 181
>gb|AY641568.1| Brassica oleracea photosystem II protein (psbO) mRNA, complete cds Length = 1158 Score = 93.7 bits (47), Expect = 6e-16 Identities = 263/335 (78%) Strand = Plus / Plus Query: 57 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 116 ||||| ||||| || ||||||||||| ||| ||||||| || |||||||| ||||| || Sbjct: 269 gccggattcgctcttgcaacctctgctctcgtcgtctcgggagcaagtgcagagggagct 328 Query: 117 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 176 || ||||| || || | ||||| || ||||||||||| |||||||| || || || ||| Sbjct: 329 ccgaagagactcacatatgacgagatacagagcaagacatacatggaagtcaaaggaacc 388 Query: 177 ggcaccgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggcc 236 || || || |||||||| || || || ||||| ||| || | ||| |||||||| | Sbjct: 389 ggaactgccaaccagtgtccaactattgacggtggctctgagactttctccttcaagcca 448 Query: 237 ggcaagtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgag 296 || ||||||| |||||||||||| | ||||| || |||||||||||||| |||||| Sbjct: 449 ggtaagtacgctggcaagaagttctgcttcgagcctacttccttcaccgtcaaagccgag 508 Query: 297 ggcatccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcact 356 | | ||||||| || || | |||||||| ||||||||||||||||||||||| Sbjct: 509 agtgttagtaagaacgcacctcccgagttccagaacaccaagctcatgacccgtctcacc 568 Query: 357 tacacccttgacgagatggaaggcccgctcgaggt 391 | ||| |||||||| || |||||||| ||||||| Sbjct: 569 tgcactcttgacgaaatcgaaggccccttcgaggt 603 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 426 gacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttc 485 ||||| ||||||||||| || ||||| || |||||||| ||||||||||| ||||| ||| Sbjct: 638 gacggaatcgactacgctgcagtcactgttcagctcccaggaggcgagcgtgtgccattc 697 Query: 486 ctcttcaccgtcaagcagct 505 |||||||| ||||||||||| Sbjct: 698 ctcttcacagtcaagcagct 717
>gb|AY843522.1| Ammopiptanthus mongolicus clone F19 cold-induced mRNA Length = 834 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 41 cgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcgc 100 ||||||| |||| || || || ||||||||||| |||||||| ||| | || ||||| || Sbjct: 240 cgacgccaccaaaattgcaggattcgccctcgccacctctgctctcgttgtatctggagc 299 Query: 101 aagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctacat 160 ||||||||| || | || |||||||| |||| ||||||||||||||||||||| ||||| Sbjct: 300 aagtgcggaaggtgttccaaagaggctaacctacgacgaaatccagagcaagacatacat 359 Query: 161 gg 162 || Sbjct: 360 gg 361
>dbj|AB043960.2| Bruguiera gymnorrhiza psbO mRNA for oxygen evolving enhancer protein 1 precursor, complete cds Length = 1102 Score = 83.8 bits (42), Expect = 6e-13 Identities = 201/254 (79%) Strand = Plus / Plus Query: 120 aagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggc 179 |||||||| |||| |||||||||||||||||||| || |||| || ||||| ||||| Sbjct: 274 aagaggctaacctatgacgaaatccagagcaagacatatctggaagtaaagggaaccgga 333 Query: 180 accgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggc 239 || || ||||| ||||| || ||||| || || || ||||| || |||||||| | ||| Sbjct: 334 actgctaaccaatgcccaacaatcgaaggtggggttgactcatttgccttcaagccaggc 393 Query: 240 aagtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggc 299 |||||| | ||||||| || |||||||| || || || |||||||||||||| || || Sbjct: 394 aagtacaatgtgaagaaattatgcctggaaccaacttcattcaccgtcaaggctgaaggt 453 Query: 300 atccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttac 359 | | ||||| | ||||| | |||||||| |||||||||||||| ||| | || ||| Sbjct: 454 gtaaacaagaatgccccacccgagttccagaacaccaagctcatgactcgtttaacctac 513 Query: 360 acccttgacgagat 373 || || |||||||| Sbjct: 514 acactcgacgagat 527 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 447 gtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctc 506 ||||| |||||||| || || ||||| || ||||| ||||||||||| ||||||||||| Sbjct: 601 gtcaccgtgcagctgcctggtggcgaacgtgtgccattcctcttcacagtcaagcagcta 660 Query: 507 gtcgccaccggcaagccggagagcttcagcgg 538 || || || |||||||| || ||||| ||||| Sbjct: 661 gtagcaacaggcaagccagaaagctttagcgg 692
>gb|AY364014.1| Brassica rapa photosystem II protein (psbO) mRNA, complete cds Length = 1156 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 426 gacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttc 485 ||||| ||||||||||| || ||||| || ||||| || ||||||||||| ||||||||| Sbjct: 629 gacggaatcgactacgctgcagtcactgttcagcttccaggaggcgagcgtgtgccgttc 688 Query: 486 ctcttcaccgtcaagcagct 505 |||||||| | ||||||||| Sbjct: 689 ctcttcacagccaagcagct 708 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 327 cagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggccc 382 ||||| ||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 529 cagaataccaagctcatgacccgtctcacctacacccttgacgaaatcgaaggccc 584 Score = 71.9 bits (36), Expect = 2e-09 Identities = 189/240 (78%) Strand = Plus / Plus Query: 57 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 116 ||||| ||||| || ||||||||||| ||| ||||||| || |||||||| ||||| || Sbjct: 259 gccggattcgctcttgcaacctctgctctcgtcgtctcgggagcaagtgcagagggagct 318 Query: 117 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 176 || ||||| || || | ||||| || ||||||||||| |||||||| || || || ||| Sbjct: 319 ccgaagagactcacttatgacgagatacagagcaagacatacatggaagtcaaaggaacc 378 Query: 177 ggcaccgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggcc 236 || || || |||||||| || || || ||||| ||| || | ||| ||||||| || Sbjct: 379 ggaactgccaaccagtgtccaactattgacggtggctctgagactttctccttcaaaccc 438 Query: 237 ggcaagtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgag 296 || ||||||| |||||||||||| | ||||| || |||||||||||||| |||||| Sbjct: 439 ggtaagtacgctggcaagaagttctgcttcgagcctacttccttcaccgtcaaagccgag 498
>gb|DQ226849.1| Boechera divaricarpa isolate SLW-C-D01 mRNA sequence Length = 379 Score = 79.8 bits (40), Expect = 9e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 57 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 116 ||||| ||||| || || |||||||| ||| ||||||| || |||||||| ||||| || Sbjct: 193 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcagagggagct 252 Query: 117 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 176 || ||||| ||||||| ||| || || ||||||||||| |||||||| ||||| || || Sbjct: 253 ccaaagagactgacctacgatgagattcagagcaagacatacatggaagtgaaaggaact 312 Query: 177 ggcaccgcgaaccagtgccc 196 || || || ||||||||||| Sbjct: 313 ggaacggctaaccagtgccc 332
>emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BAC clone F18B3 Length = 89469 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 311 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 40342 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 40283 Query: 312 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 371 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 40282 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 40223 Query: 372 atggaagg 379 || ||||| Sbjct: 40222 atcgaagg 40215 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 103 gtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctacatgg 162 |||||||||| || || |||||||| || | |||||| || ||||||||||| ||||||| Sbjct: 40491 gtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttacatgg 40432 Query: 163 aggtgaagggtaccggcaccgcgaaccagtg 193 |||| ||||||||||| || || |||||||| Sbjct: 40431 aggtaaagggtaccggtacggcaaaccagtg 40401 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 432 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 491 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 40064 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 40005 Query: 492 accgtcaagcagctcg 507 || || |||||||||| Sbjct: 40004 acggttaagcagctcg 39989
>emb|X05548.1|SOPS33 Spinach mRNA for 33kDA precursor protein (associated with photosynthetic water oxidation complex) Length = 1153 Score = 79.8 bits (40), Expect = 9e-12 Identities = 145/180 (80%) Strand = Plus / Plus Query: 323 cttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggccc 382 |||||| || |||||||||||||||||| | || |||||||| |||||||| || || || Sbjct: 514 cttccaaaacaccaagctcatgacccgtttaacctacaccctcgacgagatcgagggacc 573 Query: 383 gctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacgc 442 | |||||| |||| ||||| ||||||| |||||||| ||||| || |||||||| Sbjct: 574 ctttgaggtctcgtccgatggcacggtcaagtttgaggagaaagacggtattgactacgc 633 Query: 443 ggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagca 502 || ||||| || |||||||| || || ||||| || |||||| | |||||| ||||||| Sbjct: 634 tgcagtcacggtccagctccctggtggggagcgtgtcccgttcttgttcaccatcaagca 693 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 127 tgaccttcgacgaaatccagagcaagac 154 |||||| |||||| |||||||||||||| Sbjct: 318 tgacctacgacgagatccagagcaagac 345
>dbj|D13297.1|PEAPSBO Pisum sativum mRNA for precursor for 33-kDa protein of photosystem II, complete cds Length = 1221 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 414 ttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgag 473 ||||||||||| ||||| || || ||||| || |||||||| ||||| || ||||||||| Sbjct: 611 ttcgaggagaaagacggaattgattacgctgcagtcacagttcagcttcctggaggcgag 670 Query: 474 cgcgtgccgttcctcttcaccgtcaagcag 503 || || |||||||| |||||| |||||||| Sbjct: 671 cgtgttccgttccttttcaccatcaagcag 700 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 90 gtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagc 149 |||||||| |||||||| || || || || |||||||| || |||||||||||||| ||| Sbjct: 287 gtctctggagcaagtgcagaaggtgctccaaagaggctaactttcgacgaaatccaaagc 346 Query: 150 aa 151 || Sbjct: 347 aa 348
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 274 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 333 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 334 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 393 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 394 tggaagtgaaaggaactggaacggctaaccagtgccc 430 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 558 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 613 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 486 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 526
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 188 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 247 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 248 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 307 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 308 tggaagtgaaaggaactggaacggctaaccagtgccc 344 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 472 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 527 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 400 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 440
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 233 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 292 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 293 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 352 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 353 tggaagtgaaaggaactggaacggctaaccagtgccc 389 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 517 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 572 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 445 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 485
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 188 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 247 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 248 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 307 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 308 tggaagtgaaaggaactggaacggctaaccagtgccc 344 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 472 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 527 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 400 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 440
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 222 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 281 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 282 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 341 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 342 tggaagtgaaaggaactggaacggctaaccagtgccc 378 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 506 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 561 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 434 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 474
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 224 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 283 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 284 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 343 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 344 tggaagtgaaagggactggaacggctaaccagtgccc 380 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 508 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 563 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 436 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 476
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 222 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 281 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 282 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 341 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 342 tggaagtgaaaggaactggaacggctaaccagtgccc 378 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 506 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 561 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 434 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 474
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 222 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 281 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 282 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 341 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 342 tggaagtgaaaggaactggaacggctaaccagtgccc 378 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 506 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 561 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 434 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 474
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 220 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 279 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 280 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 339 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 340 tggaagtgaaaggaactggaacggctaaccagtgccc 376 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 504 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 559 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 432 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 472
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 213 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 272 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 273 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 332 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 333 tggaagtgaaaggaactggaacggctaaccagtgccc 369 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 497 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 552 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 425 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 465
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 204 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 263 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 264 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 323 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 324 tggaagtgaaaggaactggaacggctaaccagtgccc 360 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 488 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 543 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 416 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 456
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 274 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 333 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 334 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 393 Query: 160 tggaggtgaagggtaccggcaccgcgaaccagtgccc 196 |||| ||||| || || || || || ||||||||||| Sbjct: 394 tggaagtgaaaggaactggaacggctaaccagtgccc 430 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 558 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 613 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 486 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 526
>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence Length = 744 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 217 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 272 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 145 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 185 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 144 cagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgccc 196 ||||||||||| |||||||| ||||| || || || || || ||||||||||| Sbjct: 37 cagagcaagacatacatggaagtgaaaggaactggaacggctaaccagtgccc 89
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 512 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 76 cctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcg 135 ||||||| ||| ||||||| || |||||||||||||| || || ||||| |||||| | Sbjct: 264 cctctgctctcgtcgtctcgggagcaagtgcggagggagctccaaagagattgacctatg 323 Query: 136 acgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcc 195 | || || ||||||||||| |||||||| ||||| || || || || || |||||||||| Sbjct: 324 atgagattcagagcaagacatacatggaagtgaaaggaactggaacggctaaccagtgcc 383 Query: 196 c 196 | Sbjct: 384 c 384 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 440 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 480
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 58427 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 58482 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 99 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 158 |||||||||||||| || || ||||| |||||| || || || ||||||||||| ||| Sbjct: 58202 gcaagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacatac 58261 Query: 159 atggaggtgaagggtaccggcaccgcgaaccagtgccc 196 ||||| ||||| || || || || || ||||||||||| Sbjct: 58262 atggaagtgaaaggaactggaacggctaaccagtgccc 58299 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 58355 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 58395
>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene Length = 1520 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 802 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 857 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 730 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 770 Score = 44.1 bits (22), Expect = 0.51 Identities = 79/98 (80%) Strand = Plus / Plus Query: 99 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 158 |||||||||||||| || || ||||| |||| | || || || ||||||||||| ||| Sbjct: 577 gcaagtgcggagggagctccaaagagattgacttatgatgagattcagagcaagacatac 636 Query: 159 atggaggtgaagggtaccggcaccgcgaaccagtgccc 196 ||||| ||||| || || || || || ||||||||||| Sbjct: 637 atggaagtgaaaggaactggaacggctaaccagtgccc 674
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 379 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 505 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 560 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 40 ccgacgccgccaagatggccggcttcgccctcgcaacctctgccctcctcgtctctggcg 99 ||||||| | ||| || ||||| ||||| || || |||||||| ||| ||||||| || | Sbjct: 221 ccgacgctgtcaaaatcgccggattcgctcttgccacctctgctctcgtcgtctcgggag 280 Query: 100 caagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctaca 159 ||||||||||||| || || ||||| |||||| || || || ||||||||||| |||| Sbjct: 281 caagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacataca 340 Query: 160 tggaggtgaa 169 |||| ||||| Sbjct: 341 tggaagtgaa 350 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 433 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 473
>emb|AJ821800.1| Guillardia theta partial mRNA for oxygen-evolving enhancer (oee gene) Length = 792 Score = 69.9 bits (35), Expect = 9e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 399 gacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcag 458 |||||| |||||| ||| |||||||||| || |||||||||| ||| ||| || ||| Sbjct: 286 gacggctccctcaccttccaggagaaggagggtctcgactacgccgccaccaccgtccag 345 Query: 459 ctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgcca 513 || || ||||||||||| || || ||| |||||||| ||||| |||||||||||| Sbjct: 346 cttcctggaggcgagcgtgttcccttcttcttcaccatcaaggagctcgtcgcca 400
>gb|AY116669.1| Isochrysis galbana CCMP1323 oxygen evolving enhancer 1 precursor (psbO) mRNA, complete cds; nuclear gene for plastid product Length = 1244 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 420 gagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtg 479 ||||||||||| || |||||||| || ||| |||||||| || || |||||||||||| Sbjct: 514 gagaaggacggtattgactacgcagcgaccaccgtgcagctgccgggcggcgagcgcgtg 573 Query: 480 ccgttcctcttcaccgt 496 || |||||||||||||| Sbjct: 574 cccttcctcttcaccgt 590
>emb|AJ784854.1| Cyanophora paradoxa mRNA for oxygen-evolving enhancer protein 1 (psbO gene) Length = 1338 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 420 gagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtg 479 |||||||||||| |||||||| |||| | || || |||||||||| ||||||| ||| Sbjct: 590 gagaaggacggcttcgactaccaggccctgaccgtcaagctccccggtggcgagctcgtc 649 Query: 480 ccgttcctcttcaccgtcaagcagctcgtcgcca 513 ||| | ||||||||||| ||| ||||| |||||| Sbjct: 650 ccgatgctcttcaccgttaaggagctcatcgcca 683
>gb|DQ122908.1| Chlamydomonas incerta chloroplast oxygen-evolving enhancer protein 1 (Psb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1213 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 426 gacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttc 485 |||||||| |||||||| ||| ||| || ||||| ||||| |||||||||||| | ||| Sbjct: 478 gacggcattgactacgccgccaccaccgtccagctgcccggtggcgagcgcgtggctttc 537 Query: 486 ctcttcaccgtcaagcag 503 || |||||| |||||||| Sbjct: 538 ctgttcaccatcaagcag 555
>gb|AY952375.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 33 kDa subunit (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1048 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 129 accttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaac 188 |||||||||||||| || |||||||| |||||||| || ||||| || || || || ||| Sbjct: 287 accttcgacgaaattcaaagcaagacatacatggaagtaaagggaactggaactgctaac 346 Query: 189 cagtgcccgaccat 202 |||||||| ||||| Sbjct: 347 cagtgcccaaccat 360 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagat 373 |||||||| |||||||||||||| || | || ||||||||||| ||||| Sbjct: 482 ttccagaaaaccaagctcatgacacgcttaacctacacccttgatgagat 531 Score = 40.1 bits (20), Expect = 7.9 Identities = 101/128 (78%) Strand = Plus / Plus Query: 411 aagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggc 470 ||||| ||||||||||| || || || || || || || ||||| ||||| || || || Sbjct: 569 aagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggt 628 Query: 471 gagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagc 530 ||||| ||||| ||||||||||| |||| ||||| || || | |||||| || || ||| Sbjct: 629 gagcgtgtgcccttcctcttcactatcaaacagctagtggcaagcggcaaaccagaaagc 688 Query: 531 ttcagcgg 538 || ||||| Sbjct: 689 tttagcgg 696
>emb|X15350.1|PS33KDA Pea mRNA for the 33kDa polypeptide of the water-oxidizing complex of photosystem II Length = 1054 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 414 ttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgag 473 ||||||||||| ||||| || || ||||| || ||||| || ||||| || ||||||||| Sbjct: 562 ttcgaggagaaagacggaattgattacgctgcagtcaccgttcagcttcctggaggcgag 621 Query: 474 cgcgtgccgttcctcttcaccgtcaagcag 503 || || || ||||| |||||| |||||||| Sbjct: 622 cgtgttccattccttttcaccatcaagcag 651 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 90 gtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagc 149 |||||||| |||||||| || || || || |||||||| || |||||||||||||| ||| Sbjct: 238 gtctctggagcaagtgcagaaggtgctccaaagaggctaactttcgacgaaatccaaagc 297 Query: 150 aa 151 || Sbjct: 298 aa 299
>emb|X13826.1|CROEE1 C.reinhardtii psb1 mRNA for OEE1 protein of photosystem II (oxygen-evolving enhancer protein) Length = 1714 Score = 60.0 bits (30), Expect = 9e-06 Identities = 138/174 (79%) Strand = Plus / Plus Query: 330 aagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgag 389 |||||||||||||||||||| || || |||||||| |||| ||| ||| || || || Sbjct: 514 aagaccaagctcatgacccgcctgacctacaccctggacgccatgtccggctcgttcaag 573 Query: 390 gtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtc 449 |||||| | |||||| || || | ||||| | |||||||| |||||||| ||| | Sbjct: 574 gtcggctctgacggctccgctgagctgaaggaggatgacggcattgactacgccgccacc 633 Query: 450 acagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcag 503 || || ||||| ||||| |||||||||||| | ||||| |||||| |||||||| Sbjct: 634 accgtccagctgcccggtggcgagcgcgtggctttcctgttcaccatcaagcag 687
>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 58.0 bits (29), Expect = 3e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccg-tctcacttacacccttgacgagatggaagg 379 |||||||| || |||||||||||||| ||| || ||||||||||||||||| ||||| Sbjct: 801 ttccagaacacaaagctcatgacccgctcttacctacacccttgacgagatcgaagg 857 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 252 aagaagttctgcctggagcccacctccttcaccgtcaaggc 292 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 729 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 769 Score = 44.1 bits (22), Expect = 0.51 Identities = 79/98 (80%) Strand = Plus / Plus Query: 99 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 158 |||||||||||||| || || |||| |||||| || || || ||||||||||| ||| Sbjct: 575 gcaagtgcggagggagctccagagagattgacctatgatgagattcagagcaagacatac 634 Query: 159 atggaggtgaagggtaccggcaccgcgaaccagtgccc 196 ||||| ||||| || || || || || ||||||||||| Sbjct: 635 atggaagtgaaaggaactggaacggctaaccagtgccc 672
>gb|AY220076.1| Nicotiana tabacum oxygen evolving complex 33 kDa photosystem II protein (PsbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1263 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 129 accttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaac 188 |||||||||||||| || |||||||| |||||||| || ||||| || || || || ||| Sbjct: 293 accttcgacgaaattcaaagcaagacatacatggaagtaaagggaactggaactgctaac 352 Query: 189 cagtgccc 196 |||||||| Sbjct: 353 cagtgccc 360 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagat 373 |||||||| |||||||||||||| || | || ||||||||||| ||||| Sbjct: 488 ttccagaaaaccaagctcatgacacgcttaacctacacccttgatgagat 537 Score = 40.1 bits (20), Expect = 7.9 Identities = 101/128 (78%) Strand = Plus / Plus Query: 411 aagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggc 470 ||||| ||||||||||| || || || || || || || ||||| ||||| || || || Sbjct: 575 aagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctgggggt 634 Query: 471 gagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagc 530 ||||| ||||| ||||||||||| |||| ||||| || || | |||||| || || ||| Sbjct: 635 gagcgtgtgcccttcctcttcactatcaaacagctagtggcaagcggcaaaccagaaagc 694 Query: 531 ttcagcgg 538 || ||||| Sbjct: 695 tttagcgg 702
>gb|BT014033.1| Lycopersicon esculentum clone 133096F, mRNA sequence Length = 1170 Score = 54.0 bits (27), Expect = 5e-04 Identities = 126/159 (79%) Strand = Plus / Plus Query: 141 atccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacc 200 |||||||||||||| |||||||| || ||||| || || || || ||||||||||| ||| Sbjct: 322 atccagagcaagacatacatggaagtaaagggaactggaacagcaaaccagtgccctacc 381 Query: 201 atcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttc 260 || || || || || || ||| |||||||| | ||||| ||| | ||||||||| Sbjct: 382 atagatggaggtgttgatagcttttccttcaagccaggcaaatacaacgccaagaagttc 441 Query: 261 tgcctggagcccacctccttcaccgtcaaggccgagggc 299 ||| | ||||| || || |||||||||||||| |||||| Sbjct: 442 tgcttagagccaacatcattcaccgtcaaggcagagggc 480
>emb|X17578.1|STPPOEC S.tuberosum mRNA for a 33kDa precursor protein of the oxygen-evolving complex Length = 1116 Score = 54.0 bits (27), Expect = 5e-04 Identities = 135/171 (78%) Strand = Plus / Plus Query: 129 accttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaac 188 ||||| ||||| || ||||||||||| |||||||| || ||||| || || || || ||| Sbjct: 274 acctttgacgagattcagagcaagacatacatggaagtaaagggaactggaactgccaac 333 Query: 189 cagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaagtacgag 248 |||||||| ||||| || || || || || ||| |||||||| | ||||| ||| | Sbjct: 334 cagtgccctaccatagatggaggtgttgatagctttgccttcaagccaggcaaatacaac 393 Query: 249 atgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggc 299 |||||||||||| | ||||| || || |||||||||||||| |||||| Sbjct: 394 gccaagaagttctgcttagagccaacatcattcaccgtcaaggcagagggc 444
>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB 8233 Length = 30837 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 390 gtcggcgccgacggcaccctca 411 |||||||||||||||||||||| Sbjct: 27617 gtcggcgccgacggcaccctca 27596
>gb|AY130990.1| Heterosigma akashiwo oxygen-evolving enhancer 1 (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1107 Score = 44.1 bits (22), Expect = 0.51 Identities = 40/46 (86%) Strand = Plus / Plus Query: 471 gagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccaccg 516 |||||||| || ||||||||||| |||||| |||| || ||||||| Sbjct: 526 gagcgcgttcctttcctcttcacggtcaaggagctggttgccaccg 571
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 550 tgcccagctacaggggttcctc 571 |||||||||||||||||||||| Sbjct: 169536 tgcccagctacaggggttcctc 169515
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 390 gtcggcgccgacggcaccctca 411 |||||||||||||||||||||| Sbjct: 31432 gtcggcgccgacggcaccctca 31411
>emb|Z11999.1|LE33KOECP L.esculentum mRNA for 33kDa precursor protein of oxygen-evolving complex Length = 1175 Score = 44.1 bits (22), Expect = 0.51 Identities = 97/122 (79%) Strand = Plus / Plus Query: 411 aagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggc 470 ||||| ||||||||||| || || || || || || || ||||| ||||| || || || Sbjct: 574 aagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggt 633 Query: 471 gagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagc 530 ||||| ||||| ||||||||||| |||| ||||| || || | ||||||||| || ||| Sbjct: 634 gagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagc 693 Query: 531 tt 532 || Sbjct: 694 tt 695
>emb|X64349.1|NT33WOP2 N.tabacum mRNA for 33 kDa polypeptide of water-oxidizing complex of photosystem II Length = 1123 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 324 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagat 373 |||||||| |||||||||||||| || | || ||||||||||| ||||| Sbjct: 488 ttccagaaaaccaagctcatgacacgcttaacctacacccttgatgagat 537 Score = 44.1 bits (22), Expect = 0.51 Identities = 61/74 (82%) Strand = Plus / Plus Query: 129 accttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaac 188 ||||| |||||||| || |||||||| |||||||| || || || || || || || ||| Sbjct: 293 acctttgacgaaattcaaagcaagacatacatggaagtcaaaggaactggaactgctaac 352 Query: 189 cagtgcccgaccat 202 |||||||| ||||| Sbjct: 353 cagtgccctaccat 366
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 550 tgcccagctacaggggttcctc 571 |||||||||||||||||||||| Sbjct: 41472 tgcccagctacaggggttcctc 41451
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 390 gtcggcgccgacggcaccctca 411 |||||||||||||||||||||| Sbjct: 36166 gtcggcgccgacggcaccctca 36145
>gb|M55426.1|STMAACC8 S.fradiae aminoglycoside acetyltransferase (aacC8) gene, complete cds Length = 1353 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 390 gtcggcgccgacggcaccctca 411 |||||||||||||||||||||| Sbjct: 646 gtcggcgccgacggcaccctca 667
>ref|XM_385211.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG05035.1) partial mRNA Length = 936 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 cctccttcaccgtcaaggccg 294 ||||||||||||||||||||| Sbjct: 53 cctccttcaccgtcaaggccg 73
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 gaaatccagagcaagacctacatgg 162 |||||||||||||||||| |||||| Sbjct: 26142 gaaatccagagcaagaccgacatgg 26166
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 214 tcgactccttccccttcaaggccggcaag 242 ||||||||||| |||||||||||||||| Sbjct: 2548780 tcgactccttcgacttcaaggccggcaag 2548752 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 gcccgctcgaggtcggcgccgacg 402 ||||||||||| |||||||||||| Sbjct: 5473916 gcccgctcgagctcggcgccgacg 5473939
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 agcccacctccttcaccgtca 288 ||||||||||||||||||||| Sbjct: 1815428 agcccacctccttcaccgtca 1815408
>dbj|AB218878.1| Streptomyces griseus genes for AraC-type transcriptional regulator, ABC-transport system, substrate-binding extracellular domain, ABC-transport system, membrane integral subunit, ABC-transport system, membrane integral subunit, ABC-transport system, ATP-binding protein, Cytochrome P-450, type III polyketide synthase, subtilisine-like serine protease, chitinase, partial and complete cds Length = 12095 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 413 gttcgaggagaaggacggcatcgactacgcggccgtc 449 |||||| |||| |||||||||||||| || ||||||| Sbjct: 853 gttcgacgagacggacggcatcgacttcgaggccgtc 889
>gb|AF110780.1|AF110780 Volvox carteri f. nagariensis clone G14 oxygen-evolving enhancer protein 1 precursor (psbO) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1427 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 329 gaagaccaagctcatgacccgtctcacttacacccttgacg 369 |||||| |||||||||||||| || || |||||||| |||| Sbjct: 419 gaagacgaagctcatgacccgcctgacctacaccctggacg 459
>gb|AF261712.1|AF261712 Ralstonia eutropha high affinity nickel transporter (hoxN) gene, complete cds; IS881, complete sequence; and group II intron, complete sequence Length = 5653 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 gaaatccagagcaagacctacatgg 162 |||||||||||||||||| |||||| Sbjct: 5030 gaaatccagagcaagaccgacatgg 5054
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 gaccatcgacggcggcgtcga 217 ||||||||||||||||||||| Sbjct: 8569574 gaccatcgacggcggcgtcga 8569554
>dbj|AB065118.1| Photobacterium phosphoreum glyA, ribX, ribD, ribC, ribBA, ribE, nusB, thiL genes for serine hydroxymethyl transferase, RibX, pyrimidine deaminase/pyrimidine reductase, riboflavin synthase, GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase, lumazine synthase, NusB protein, thiamin monophosphate kinase, partial and complete cds Length = 5616 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 caagtgcgccgacgccgccaa 52 ||||||||||||||||||||| Sbjct: 789 caagtgcgccgacgccgccaa 809
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 gaggtcggcgccgacggcaccctc 410 |||| ||||||||||||||||||| Sbjct: 2799546 gaggacggcgccgacggcaccctc 2799523
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ccggaggcgagcgcgtgccg 482 |||||||||||||||||||| Sbjct: 1527994 ccggaggcgagcgcgtgccg 1528013
>ref|XM_955652.1| Neurospora crassa OR74A hypothetical protein (NCU01267.1) partial mRNA Length = 1869 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccacctccttcaccgtcaag 290 |||||||||||||||||||| Sbjct: 359 ccacctccttcaccgtcaag 378
>ref|XM_957164.1| Neurospora crassa OR74A hypothetical protein ( (AF309689) Snz-type pyridoxine vitamin B6 biosynthetic protein SNZ1 [Neurospora crassa OR74A] ) (NCU06550.1) partial mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ctccttcaccgtcaaggccg 294 |||||||||||||||||||| Sbjct: 33 ctccttcaccgtcaaggccg 52
>ref|XM_326404.1| Neurospora crassa OR74A hypothetical protein ( (AF309689) Snz-type pyridoxine vitamin B6 biosynthetic protein SNZ1 [Neurospora crassa OR74A] ) (NCU06550.1) partial mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ctccttcaccgtcaaggccg 294 |||||||||||||||||||| Sbjct: 33 ctccttcaccgtcaaggccg 52
>ref|XM_326759.1| Neurospora crassa OR74A hypothetical protein (NCU01267.1) partial mRNA Length = 1869 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccacctccttcaccgtcaag 290 |||||||||||||||||||| Sbjct: 359 ccacctccttcaccgtcaag 378
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 ctcgtcgccaccggcaagcc 523 |||||||||||||||||||| Sbjct: 1368439 ctcgtcgccaccggcaagcc 1368458
>ref|NM_012776.1| Rattus norvegicus adrenergic receptor kinase, beta 1 (Adrbk1), mRNA Length = 2683 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gcgccgacgccgccaagatggccg 60 |||||| ||||||||||||||||| Sbjct: 127 gcgccgccgccgccaagatggccg 150
>gb|AF486581.1| Uncultured bacterium aminoglycoside 3'-N-acetyltransferase gene, complete cds Length = 38269 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gcccgctcgaggtcggcgcc 398 |||||||||||||||||||| Sbjct: 12965 gcccgctcgaggtcggcgcc 12984
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 63812 tcaccgtcaagcagctcgtc 63793
>gb|AC123847.4| Mus musculus BAC clone RP23-443O1 from chromosome 3, complete sequence Length = 189689 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 caagtacgagatgaagaagttctg 262 |||||| ||||||||||||||||| Sbjct: 86326 caagtaagagatgaagaagttctg 86349
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 acgccgccaagatggccggc 62 |||||||||||||||||||| Sbjct: 21901 acgccgccaagatggccggc 21882
>gb|BC033272.1| Mus musculus adrenergic receptor kinase, beta 1, mRNA (cDNA clone IMAGE:4457290), with apparent retained intron Length = 3540 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gcgccgacgccgccaagatggccg 60 |||||| ||||||||||||||||| Sbjct: 49 gcgccgccgccgccaagatggccg 72
>ref|XM_499937.1| Yarrowia lipolytica CLIB122, YALI0A10252g predicted mRNA Length = 1224 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cttccagaagaccaagctca 342 |||||||||||||||||||| Sbjct: 39 cttccagaagaccaagctca 58
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gcaagtgcgccgacgccgcc 50 |||||||||||||||||||| Sbjct: 1695787 gcaagtgcgccgacgccgcc 1695768
>ref|XM_786723.1| PREDICTED: Strongylocentrotus purpuratus similar to dynein, axonemal, heavy polypeptide 5 (LOC586967), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cttccagaagaccaagctca 342 |||||||||||||||||||| Sbjct: 1293 cttccagaagaccaagctca 1312
>emb|BX842618.1| Neurospora crassa DNA linkage group V BAC clone B13M13 Length = 75160 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccacctccttcaccgtcaag 290 |||||||||||||||||||| Sbjct: 55051 ccacctccttcaccgtcaag 55070
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 gaggtcggcgccgacggcaccctc 410 |||| ||||||||||||||||||| Sbjct: 31022 gaggacggcgccgacggcaccctc 30999
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 ctcgtcgccaccggcaagcc 523 |||||||||||||||||||| Sbjct: 2685856 ctcgtcgccaccggcaagcc 2685875
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 387 gaggtcggcgccgacggcaccctc 410 |||| ||||||||||||||||||| Sbjct: 259847 gaggacggcgccgacggcaccctc 259824
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gaaccagtgcccgaccatcg 204 |||||||||||||||||||| Sbjct: 167957 gaaccagtgcccgaccatcg 167976
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 aggtcggcgccgacggcacc 407 |||||||||||||||||||| Sbjct: 726342 aggtcggcgccgacggcacc 726361
>ref|NM_143756.2| Drosophila melanogaster cathD CG1548-RA (cathD), mRNA Length = 1396 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 gacggcaccctcaagttcgaggag 422 |||||||||| ||||||||||||| Sbjct: 404 gacggcacccacaagttcgaggag 381
>gb|AY052119.1| Drosophila melanogaster SD07085 full length cDNA Length = 1381 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 gacggcaccctcaagttcgaggag 422 |||||||||| ||||||||||||| Sbjct: 386 gacggcacccacaagttcgaggag 363
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 1907549 tcaccgtcaagcagctcgtc 1907530
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 1992257 tcaccgtcaagcagctcgtc 1992238
>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone BACR04B09, complete sequence Length = 174707 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 gacggcaccctcaagttcgaggag 422 |||||||||| ||||||||||||| Sbjct: 48527 gacggcacccacaagttcgaggag 48504
>gb|AF309689.1|AF309689 Neurospora crassa chromosome 4 pdx-1 region Length = 36030 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ctccttcaccgtcaaggccg 294 |||||||||||||||||||| Sbjct: 31990 ctccttcaccgtcaaggccg 31971
>dbj|AB206581.1| Oryza sativa (japonica cultivar-group) OsCPD2 mRNA for cytochrome P450, complete cds Length = 1506 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 566 tcaccgtcaagcagctcgtc 585
>dbj|AB206580.1| Oryza sativa (japonica cultivar-group) OsCPD1 mRNA for cytochrome P450, complete cds Length = 1506 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 566 tcaccgtcaagcagctcgtc 585
>gb|AF220040.1|AF220040 Drosophila melanogaster clone LD06102 cathepsin D precursor (cathD) mRNA, complete cds Length = 1394 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 gacggcaccctcaagttcgaggag 422 |||||||||| ||||||||||||| Sbjct: 383 gacggcacccacaagttcgaggag 360
>emb|BX469931.8| Zebrafish DNA sequence from clone DKEY-108D22 in linkage group 4, complete sequence Length = 204487 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gtacgagatgaagaagttct 261 |||||||||||||||||||| Sbjct: 16616 gtacgagatgaagaagttct 16635
>dbj|AK061129.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-H06, full insert sequence Length = 774 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ggcgcccaagaggctgacct 132 |||||||||||||||||||| Sbjct: 203 ggcgcccaagaggctgacct 222
>emb|BX323868.6| Zebrafish DNA sequence from clone CH211-276H18 in linkage group 4, complete sequence Length = 163299 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 gtacgagatgaagaagttct 261 |||||||||||||||||||| Sbjct: 130761 gtacgagatgaagaagttct 130780
>dbj|AK060257.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-E10, full insert sequence Length = 1784 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 650 tcaccgtcaagcagctcgtc 669
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 gacggcaccctcaagttcgaggag 422 |||||||||| ||||||||||||| Sbjct: 34716 gacggcacccacaagttcgaggag 34739
>emb|AL929241.13| Mouse DNA sequence from clone RP23-4L24 on chromosome 2, complete sequence Length = 168308 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 gagcttcagcgggcccttcc 546 |||||||||||||||||||| Sbjct: 79825 gagcttcagcgggcccttcc 79806
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 2000038 tcaccgtcaagcagctcgtc 2000019
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 1907500 tcaccgtcaagcagctcgtc 1907481
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 102240 tcaccgtcaagcagctcgtc 102221
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 tcaccgtcaagcagctcgtc 509 |||||||||||||||||||| Sbjct: 60672 tcaccgtcaagcagctcgtc 60691
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cttccagaagaccaagctca 342 |||||||||||||||||||| Sbjct: 1037671 cttccagaagaccaagctca 1037652
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 cgtcgccaccggcaagccgg 525 |||||||||||||||||||| Sbjct: 3301339 cgtcgccaccggcaagccgg 3301358
>gb|M87854.1|RATBARK1 Rattus norvegicus beta-adrenergic receptor kinase 1 (beta-ARK1) mRNA, complete cds Length = 2683 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gcgccgacgccgccaagatggccg 60 |||||| ||||||||||||||||| Sbjct: 127 gcgccgccgccgccaagatggccg 150 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,394,978 Number of Sequences: 3902068 Number of extensions: 4394978 Number of successful extensions: 85824 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83885 Number of HSP's gapped (non-prelim): 1912 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
