ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal11d21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KLC_STRPU (Q05090) Kinesin light chain (KLC) 29 3.1
2IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 s... 28 9.1

>KLC_STRPU (Q05090) Kinesin light chain (KLC)|
          Length = 686

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -2

Query: 51  RHHRRSSSTPRAGRSHS 1
           RHHRRSS TPR G + S
Sbjct: 536 RHHRRSSGTPRHGSTES 552



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>IF3A_HUMAN (Q14152) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3|
            theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a)
          Length = 1382

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = +2

Query: 14   PARGVDEDLRWWRRGTAVSGPAG*VTYVRXPDADGRGPWRG 136
            P RG+DED   WR      GP       R    D RGP RG
Sbjct: 1018 PRRGLDEDRGSWRTADEDRGP-------RRGMDDDRGPRRG 1051


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,395,439
Number of Sequences: 219361
Number of extensions: 274883
Number of successful extensions: 723
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 80,573,946
effective HSP length: 22
effective length of database: 75,748,004
effective search space used: 1817952096
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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