ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal11d20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1) 28 6.8
2PURA_ZYMMO (Q5NLU9) Adenylosuccinate synthetase (EC 6.3.4.4) (IM... 28 6.8
3IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1) 28 6.8
4GEA2_YEAST (P39993) ARF guanine-nucleotide exchange factor 2 28 6.8

>IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)|
          Length = 1251

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   AHRHRPMAR**IHPPINIARLI 68
           AHRHR  AR  +HPP+N +R I
Sbjct: 356 AHRHRGSAR--LHPPLNHSRSI 375



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>PURA_ZYMMO (Q5NLU9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 429

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
 Frame = +1

Query: 7   IVIDPWHGDEFTHRL------ILPD*SAI-DTCMVIIRLSSCMDG 120
           +VIDPWH  +   RL      I PD  AI +T  +I+ L S +DG
Sbjct: 71  VVIDPWHFRDEMERLRKQDVVITPDTLAIAETSPLILPLHSELDG 115



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>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)|
          Length = 1242

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 3   AHRHRPMAR**IHPPINIARLI 68
           AHRHR  AR  +HPP+N +R I
Sbjct: 356 AHRHRGSAR--LHPPLNHSRSI 375



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>GEA2_YEAST (P39993) ARF guanine-nucleotide exchange factor 2|
          Length = 1459

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/84 (20%), Positives = 42/84 (50%)
 Frame = -2

Query: 384 ESIKQAQVLQHFLVIATSVI*SVKITYYSSTQLDXXXXXXXXXXXSTLNPEAAAVRRPLK 205
           E+  +  +++  L+   S++ +   ++++ST ++            ++N   A  +  L 
Sbjct: 450 ENKNKPSIIKELLIEQISILWTRSPSFFTSTFINFDCNLDRADV--SINFLKALTKLALP 507

Query: 204 HSSTITVENNPAICRQGLIIMVNN 133
            S+  T E+ P IC +GL+ +V++
Sbjct: 508 ESALTTTESVPPICLEGLVSLVDD 531


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,926,432
Number of Sequences: 219361
Number of extensions: 994966
Number of successful extensions: 2004
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2004
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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