>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  305 bits (780), Expect(2) = 2e-91
 Identities = 149/150 (99%), Positives = 150/150 (100%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA
Sbjct: 278 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 337

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV
Sbjct: 338 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 397

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFYG 458
           KRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 398 KRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 51.2 bits (121), Expect(2) = 2e-91
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +2

Query: 506 GKGAQQGTLPVPEGCTDQNAKN 571
           GKGAQQGTLPVPEGCTDQNAKN
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKN 448

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  272 bits (696), Expect = 4e-73
 Identities = 127/150 (84%), Positives = 142/150 (94%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGA
Sbjct: 278 STLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGA 337

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NV
Sbjct: 338 LRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENV 397

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFYG 458
           KRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 398 KRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  272 bits (696), Expect = 4e-73
 Identities = 127/150 (84%), Positives = 142/150 (94%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGA
Sbjct: 275 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 334

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NV
Sbjct: 335 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 394

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFYG 458
           KRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 395 KRVQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  256 bits (655), Expect(2) = 3e-72
 Identities = 119/150 (79%), Positives = 138/150 (92%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGA
Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGA 347

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NV
Sbjct: 348 LRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENV 407

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFYG 458
           KRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 408 KRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 35.0 bits (79), Expect(2) = 3e-72
 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +2

Query: 503 GGKGAQQ-GTLPVPEGCTDQNAKN 571
           GG+ AQQ G +PVPEGCTD  A N
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATN 460

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  249 bits (636), Expect(2) = 4e-71
 Identities = 118/150 (78%), Positives = 135/150 (90%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGA
Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGA 347

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NV
Sbjct: 348 LRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENV 407

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFYG 458
           KRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 408 KRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 38.5 bits (88), Expect(2) = 4e-71
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +2

Query: 506 GKGAQQGTLPVPEGCTDQNAKN 571
           GKGAQQ  LPVPEGCTD  A+N
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAEN 458

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  248 bits (634), Expect(2) = 8e-70
 Identities = 116/150 (77%), Positives = 135/150 (90%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFGA
Sbjct: 286 STLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGA 345

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NV
Sbjct: 346 LRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENV 405

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFYG 458
           KRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 406 KRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 35.0 bits (79), Expect(2) = 8e-70
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +2

Query: 506 GKGAQQGTLPVPEGCTDQNAKN 571
           GK AQQ +LPV +GCTD  AKN
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKN 456

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  259 bits (663), Expect = 3e-69
 Identities = 120/150 (80%), Positives = 140/150 (93%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGA
Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGA 347

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NV
Sbjct: 348 LRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENV 407

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFYG 458
           KRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 408 KRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  259 bits (661), Expect = 5e-69
 Identities = 119/149 (79%), Positives = 140/149 (93%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGA
Sbjct: 284 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGA 343

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NV
Sbjct: 344 LRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENV 403

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFY 455
           KRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 404 KRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  258 bits (659), Expect = 8e-69
 Identities = 123/148 (83%), Positives = 138/148 (93%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGA
Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGA 351

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NV
Sbjct: 352 LRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENV 411

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSF 452
           KRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 412 KRVQLAETYLKEAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  256 bits (655), Expect = 2e-68
 Identities = 122/146 (83%), Positives = 138/146 (94%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGA
Sbjct: 287 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGA 346

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NV
Sbjct: 347 LRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENV 406

Query: 369 KRVQLADTYMSQAALGDANQDAMKTG 446
           KRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 407 KRVQLAETYLKEAALGDANADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  256 bits (654), Expect = 3e-68
 Identities = 118/148 (79%), Positives = 138/148 (93%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGA
Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGA 347

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NV
Sbjct: 348 LRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENV 407

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSF 452
           KRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 408 KRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  252 bits (644), Expect = 5e-67
 Identities = 121/149 (81%), Positives = 133/149 (89%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGA
Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGA 351

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NV
Sbjct: 352 LRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENV 411

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFY 455
           KRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 412 KRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  248 bits (632), Expect = 1e-65
 Identities = 111/149 (74%), Positives = 138/149 (92%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGA
Sbjct: 290 STLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGA 349

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NV
Sbjct: 350 LRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENV 409

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFY 455
           KRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 410 KRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  239 bits (610), Expect = 4e-63
 Identities = 108/149 (72%), Positives = 136/149 (91%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFGA
Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGA 351

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NV
Sbjct: 352 LRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENV 411

Query: 369 KRVQLADTYMSQAALGDANQDAMKTGSFY 455
           KRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 412 KRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  207 bits (526), Expect = 2e-53
 Identities = 95/125 (76%), Positives = 111/125 (88%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGA
Sbjct: 285 STLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGA 344

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NV
Sbjct: 345 LRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENV 404

Query: 369 KRVQL 383
           KRV+L
Sbjct: 405 KRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  180 bits (457), Expect = 2e-45
 Identities = 88/135 (65%), Positives = 105/135 (77%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGA
Sbjct: 261 STLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGA 320

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NV
Sbjct: 321 LRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENV 379

Query: 369 KRVQLADTYMSQAAL 413
           KRVQLAD Y+S A L
Sbjct: 380 KRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  149 bits (375), Expect = 7e-36
 Identities = 66/129 (51%), Positives = 92/129 (71%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF A
Sbjct: 161 STLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSA 220

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  +
Sbjct: 221 LRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRI 280

Query: 369 KRVQLADTY 395
           +  QL D Y
Sbjct: 281 ETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  143 bits (361), Expect = 3e-34
 Identities = 65/129 (50%), Positives = 90/129 (69%)
 Frame = +3

Query: 9   ATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 188
           +TLYAPLIRDGRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF A
Sbjct: 161 STLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSA 220

Query: 189 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 368
           LR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V
Sbjct: 221 LRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRV 280

Query: 369 KRVQLADTY 395
              QL D Y
Sbjct: 281 DNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +3

Query: 144 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 323
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = -3

Query: 455  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXLEGHGPVP 276
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 275  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 105
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 104  -DTLADTDTVVTGGSPVELLHTTITD 30
               L   + V+  G PV   H  + D
Sbjct: 781  WTQLGHNEPVIDAGWPVFDAHALVQD 806

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = +3

Query: 288 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 443
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 444 GSFYG*KILHTHPPSLAA 497
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +3

Query: 141 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 320
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 321 KLLEYGHMLVQEQDNVKRV 377
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 227 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 102
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>MIND_SHIFL (P0AEZ6) Septum site-determining protein minD (Cell division|
           inhibitor minD)
          Length = 269

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
 Frame = +3

Query: 6   EATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFF- 182
           +ATL   LI+D R E  Y  P    R          D ++ E V K++D       +F  
Sbjct: 66  DATLNQALIKDKRTENLYILPASQTR--------DKDALTREGVAKVLDDLKAMDFEFIV 117

Query: 183 ---------GALRARVYDDE 215
                    GAL A  + DE
Sbjct: 118 CDSPAGIETGALMALYFADE 137

>MIND_ECOLI (P0AEZ3) Septum site-determining protein minD (Cell division|
           inhibitor minD)
          Length = 269

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
 Frame = +3

Query: 6   EATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFF- 182
           +ATL   LI+D R E  Y  P    R          D ++ E V K++D       +F  
Sbjct: 66  DATLNQALIKDKRTENLYILPASQTR--------DKDALTREGVAKVLDDLKAMDFEFIV 117

Query: 183 ---------GALRARVYDDE 215
                    GAL A  + DE
Sbjct: 118 CDSPAGIETGALMALYFADE 137

>MIND_ECOL6 (P0AEZ4) Septum site-determining protein minD (Cell division|
           inhibitor minD)
          Length = 269

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
 Frame = +3

Query: 6   EATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFF- 182
           +ATL   LI+D R E  Y  P    R          D ++ E V K++D       +F  
Sbjct: 66  DATLNQALIKDKRTENLYILPASQTR--------DKDALTREGVAKVLDDLKAMDFEFIV 117

Query: 183 ---------GALRARVYDDE 215
                    GAL A  + DE
Sbjct: 118 CDSPAGIETGALMALYFADE 137

>MIND_ECO57 (P0AEZ5) Septum site-determining protein minD (Cell division|
           inhibitor minD)
          Length = 269

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
 Frame = +3

Query: 6   EATLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFF- 182
           +ATL   LI+D R E  Y  P    R          D ++ E V K++D       +F  
Sbjct: 66  DATLNQALIKDKRTENLYILPASQTR--------DKDALTREGVAKVLDDLKAMDFEFIV 117

Query: 183 ---------GALRARVYDDE 215
                    GAL A  + DE
Sbjct: 118 CDSPAGIETGALMALYFADE 137

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = +3

Query: 288 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 443
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 444 GSFYG*KILHTHPPSLAA 497
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 391 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 287
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 225 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 332
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 366

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +3

Query: 129 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 299
           + +V  V+T    S D   A+ ARV  D+++ ++GS  +E   ++ V+  +G + ++
Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280

>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA|
          Length = 616

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -3

Query: 263 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 111
           P+ N +D   ADP      LA LI   P      +V+G +  GVDDL DR+V +I   VG
Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199

Query: 110 LEDTLA 93
             D  A
Sbjct: 200 AADAPA 205

>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 117 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 293
           NV DE  +K VDTF  G  +D  G  + + +   +++W  S G  + G +   +      
Sbjct: 92  NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148

Query: 294 FEQPKMTVEKLLEYGHM 344
              P  T +     GHM
Sbjct: 149 ASDPSRTFKNKRMPGHM 165

>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
          Length = 462

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = +3

Query: 288 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 443
           VTF    +T E K +E  H  + E         NVK V + D      A    N   M+ 
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 444 GSFYG*KILHTHPPSLAA 497
           GSF    I+  HP  + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,337,362
Number of Sequences: 219361
Number of extensions: 1591889
Number of successful extensions: 5484
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5481
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)