>GLS3_YEAST (Q04952) 1,3-beta-glucan synthase component FKS3 (EC 2.4.1.34)|
            (1,3-beta-D-glucan-UDP glucosyltransferase)
          Length = 1785

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
 Frame = +1

Query: 7    LSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSRDIYRL 186
            L+EDI+AG N+  R G + H +Y Q GKGRD+G   I  F  KI  G GEQ LSR+ Y L
Sbjct: 1132 LNEDIYAGMNAICRGGKIKHSDYYQCGKGRDLGFGSILNFTTKIGAGMGEQLLSREYYYL 1191

Query: 187  GHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGL-----------DEGL 333
            G +    R LS +Y   GF+ + +   ++V +F    L L L  L           D  +
Sbjct: 1192 GTQLPMDRFLSFFYAHPGFHLNNLFISFSVQLFFV--LLLNLGALNHEIIACFYDKDAPI 1249

Query: 334  ATGRRFIHNNPLQVALASQSFVQLG-----FLMALPMMMEIGLERGFRTALSDFVLMQLQ 498
                  +    +Q AL   S   L      F+   P++++  LE+G   A S F+   L 
Sbjct: 1250 TNLETPVGCYNIQPALHWVSIFVLSIFIVFFIAFAPLLIQEVLEKGIWRAASRFLHHLLS 1309

Query: 499  LASVFFTFSLGTKTHYYGKTLLHGGAEY 582
            +A +F  F     ++     L  GGA+Y
Sbjct: 1310 MAPLFEVFVCQVYSNSLLMDLTFGGAKY 1337

>BGS4_SCHPO (O74475) 1,3-beta-glucan synthase component bgs4 (EC 2.4.1.34)|
            (1,3-beta-D-glucan-UDP glucosyltransferase)
          Length = 1955

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
 Frame = +1

Query: 7    LSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSRDIYRL 186
            ++EDI+AG N+ LR G + H EY Q GKGRD+G   I  F  K+  G GEQ LSR+ Y L
Sbjct: 1279 VNEDIYAGMNAMLRGGRIKHCEYFQCGKGRDLGFGSILNFNTKVGTGMGEQMLSREYYYL 1338

Query: 187  GHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEGLATGRRFIHNNP 366
            G +    R LS Y+   GF+ + M  + +V +F+   + L+  G    + T   +  N  
Sbjct: 1339 GTQLQLDRFLSFYFAHPGFHLNNMFIMLSVQLFM---VVLINLGAIYHVVTVCYYNGNQK 1395

Query: 367  L--QVALASQSFVQLG-----------------FLMALPMMMEIGLERGFRTALSDFVLM 489
            L    ++  +   QLG                 ++  +P+ +   +ERG   A   F   
Sbjct: 1396 LSYDTSIVPRGCYQLGPVLSWLKRCVISIFIVFWISFIPLTVHELIERGVWRATKRFFKQ 1455

Query: 490  QLQLASVFFTFSLGTKTHYYGKTLLHGGAEY 582
                + +F  F+    +      L +GGA Y
Sbjct: 1456 IGSFSPLFEVFTCQVYSQAITSDLAYGGARY 1486

>BGS2_SCHPO (O13967) 1,3-beta-glucan synthase component bgs2 (EC 2.4.1.34)|
            (1,3-beta-D-glucan-UDP glucosyltransferase) (Meiotic
            expression up-regulated protein 21)
          Length = 1894

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
 Frame = +1

Query: 7    LSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSRDIYRL 186
            ++EDI+AG  +  R G + H EY Q GKGRD+G   I  F  KI  G GEQ +SR+ Y L
Sbjct: 1255 VNEDIYAGMTALQRGGRIKHCEYYQCGKGRDLGFGSILNFTTKIGTGMGEQMVSREYYYL 1314

Query: 187  GHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEGLATGRRFIHNNP 366
            G +  F R LS YY   GF+ + +  + +V +F+   + LV  G    + T   + H+  
Sbjct: 1315 GTQLPFDRFLSFYYAHPGFHINNIFIMLSVQLFM---VVLVNLGGMYHVVTVCDYDHDQK 1371

Query: 367  LQVALASQSFVQLG-----------------FLMALPMMMEIGLERGFRTALSDFVLMQL 495
            L V +  +   QL                  F+  +P+ ++   ERG   AL+       
Sbjct: 1372 LTVPMRPEGCYQLNPVVNWLKRCIISIFIVFFISFVPLTVQELTERGAWRALTRLGKHFA 1431

Query: 496  QLASVFFTFSLGTKTHYYGKTLLHGGAEY 582
              + +F  F+  T        L  GGA Y
Sbjct: 1432 SFSPMFEVFACQTYAQSVIANLSFGGARY 1460

>BGS3_SCHPO (Q9P377) 1,3-beta-glucan synthase component bgs3 (EC 2.4.1.34)|
            (1,3-beta-D-glucan-UDP glucosyltransferase)
          Length = 1826

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
 Frame = +1

Query: 7    LSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSRDIYRL 186
            ++EDI+AG  +  R G + H +Y Q GKGRD+G   I  F  KI  G GEQ+LSR+ + L
Sbjct: 1189 VNEDIYAGMTALQRGGRIKHCDYFQCGKGRDLGFGTIINFTTKIGTGMGEQSLSREYFYL 1248

Query: 187  GHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL-----YGRLYLVL--------SGLDE 327
            G +  FFRMLS YY   GF+ + +  + ++ + +      G +Y  +        + ++ 
Sbjct: 1249 GTQLPFFRMLSFYYAHAGFHLNNVFIMISMQLLMLVFVNLGAMYHTVEICDYQAGAAINA 1308

Query: 328  GLATGRRFIHNNPLQ-VALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLA 504
             L     ++    L  +     S   + F+  LP+++   LE+G   A++        L+
Sbjct: 1309 SLYPPGCYMLKPVLDWIRRCIISIFIVFFISFLPLVVHDLLEKGVIRAVARLCKQIFSLS 1368

Query: 505  SVFFTFSLGTKTHYYGKTLLHGGAEYRA 588
             +F  F      +     L +GGA Y A
Sbjct: 1369 PMFEVFVTQNYANSIFTNLTYGGARYIA 1396

>GLS1_YEAST (P38631) 1,3-beta-glucan synthase component GLS1 (EC 2.4.1.34)|
            (1,3-beta-D-glucan-UDP glucosyltransferase) (CND1
            protein) (CWN53 protein) (FKS1 protein) (Papulacandin B
            sensitivity protein 1)
          Length = 1876

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
 Frame = +1

Query: 7    LSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSRDIYRL 186
            L+EDI+AG N+ LR G + H EY Q GKGRD+G   I  F  KI  G GEQ LSR+ Y L
Sbjct: 1219 LNEDIYAGMNAMLRGGRIKHCEYYQCGKGRDLGFGTILNFTTKIGAGMGEQMLSREYYYL 1278

Query: 187  GHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEGLATGRRFIHNNP 366
            G +    R L+ YY   GF+ + +    ++ +F+   + L     +  +    R      
Sbjct: 1279 GTQLPVDRFLTFYYAHPGFHLNNLFIQLSLQMFMLTLVNLSSLAHESIMCIYDRNKPKTD 1338

Query: 367  LQVALASQSF-------------VQLGFLMA-LPMMMEIGLERGFRTALSDFVLMQLQLA 504
            + V +   +F             + + F +A +P++++  +ERG   A   F    L L+
Sbjct: 1339 VLVPIGCYNFQPAVDWVRRYTLSIFIVFWIAFVPIVVQELIERGLWKATQRFFCHLLSLS 1398

Query: 505  SVFFTFSLGTKTHYYGKTLLHGGAEY 582
             +F  F+    +      L  GGA Y
Sbjct: 1399 PMFEVFAGQIYSSALLSDLAIGGARY 1424

>GLS2_YEAST (P40989) 1,3-beta-glucan synthase component GLS2 (EC 2.4.1.34)|
            (1,3-beta-D-glucan-UDP glucosyltransferase)
          Length = 1895

 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 41/94 (43%), Positives = 56/94 (59%)
 Frame = +1

Query: 7    LSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSRDIYRL 186
            L+EDI+AG N+ LR G + H EY Q GKGRD+G   I  F  KI  G GEQ LSR+ Y L
Sbjct: 1238 LNEDIYAGMNAVLRGGRIKHCEYYQCGKGRDLGFGTILNFTTKIGAGMGEQMLSREYYYL 1297

Query: 187  GHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL 288
            G +    R L+ YY   GF+ + +    ++ +F+
Sbjct: 1298 GTQLPIDRFLTFYYAHPGFHLNNLFIQLSLQMFM 1331

>BGS1_SCHPO (Q10287) 1,3-beta-glucan synthase component bgs1 (EC 2.4.1.34)|
            (1,3-beta-D-glucan-UDP glucosyltransferase)
          Length = 1729

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
 Frame = +1

Query: 7    LSEDIFAGFNSTLREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSRDIYRL 186
            ++EDI+AG  +  R G + H +Y Q GKGRD+G   I  F  KI  G  EQ LSR+ + L
Sbjct: 1097 VNEDIYAGMIALQRGGRIKHCDYYQCGKGRDLGFGSILNFTTKIGTGMAEQMLSREYFNL 1156

Query: 187  GHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFL-----YGRLYLVL 312
            G +  F R LS +Y   GF+ + M+ ++++ + +      G +Y V+
Sbjct: 1157 GTQLPFDRFLSFFYAHAGFHVNNMVIMFSLQLLMLVIINLGAMYTVV 1203

>Y1215_PYRHO (O58968) Hypothetical ABC transporter permease protein PH1215|
          Length = 292

 Score = 33.1 bits (74), Expect = 0.61
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
 Frame = +1

Query: 247 FSTMITVWTVYVFLYGRLYLVLSGLDEGLATGRRFIH---------NNPLQVALASQSFV 399
           F     VW +Y+       L+ S    GLA  ++ IH         NN L + L     +
Sbjct: 24  FVYFAVVWNIYISFTDWRGLIPSYHFVGLAQYKQLIHDPIFWTSLRNNLLLILLFVPGSL 83

Query: 400 QLGFLMALPMMMEIGLERGFRT 465
            LG  +A+ + M++  E GFRT
Sbjct: 84  LLGLFLAILLDMKVRFESGFRT 105

>NUDT2_ARATH (Q94B74) Nudix hydrolase 2 (EC 3.6.1.-) (AtNUDT2) (ADP-ribose|
           pyrophosphatase) (EC 3.6.1.13) (NADH pyrophosphatase)
           (EC 3.6.1.22)
          Length = 278

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = -2

Query: 399 HKRL*GKSDLERVVVYKPSSCG*SFIEATEDEIQT----PIEEYIHGPY 265
           HK   GKSDL  V + KP S     I A E EI+     P EEYI+ P+
Sbjct: 183 HKAFFGKSDLFFVCMLKPLSLE---INAQESEIEAAQWMPWEEYINQPF 228

>Y733_TREPA (O83715) Hypothetical protein TP0733|
          Length = 219

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
 Frame = +1

Query: 145 GNGEQTLSRDIYRLGHRFDFFRMLS--------CYYTT-IGFYFSTMITVWTVYVFLYGR 297
           GNG+  L    + LG+ + F +  S        CY TT   +YFS  ITV   Y F  GR
Sbjct: 84  GNGK-LLGGGGFHLGYEYFFTKNFSLGGQVSFECYRTTGSNYYFSVPITVNPTYTFAVGR 142

Query: 298 LYLVLS 315
             + LS
Sbjct: 143 WRIPLS 148

>NTRK3_PIG (P24786) NT-3 growth factor receptor precursor (EC 2.7.10.1)|
           (Neurotrophic tyrosine kinase receptor type 3) (TrkC
           tyrosine kinase) (GP145-TrkC) (Trk-C)
          Length = 825

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +1

Query: 43  LREGNVTHHEYMQVGKGRDVGLNQISLFEAKIAYGNGEQTLSR 171
           LRE  +TH EY Q G+  +  L    LF     Y NG  TL+R
Sbjct: 342 LRESKITHVEYYQEGEVSEGCL----LFNKPTHYNNGNYTLNR 380

>ZN221_HUMAN (Q9UK13) Zinc finger protein 221|
          Length = 617

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 480 KVAQCGPEPSLQTNLHHHRECHQEAKLHK 394
           K  +CG   +  T LH H+ CH   KL+K
Sbjct: 507 KCEECGKRFTQSTQLHSHQTCHTGEKLYK 535

>ZN235_MOUSE (Q61116) Zinc finger protein 235 (Zinc finger protein 93) (Zfp-93)|
          Length = 645

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 13/70 (18%)
 Frame = -2

Query: 483 HKVAQCGPEPSLQTNLHHHRECHQEAKLHK--------RL*GKSDLERVV-----VYKPS 343
           +K   CG   S  +NLH H+  H E K ++         L G  D+ + V      YK  
Sbjct: 369 YKCGDCGKRFSCSSNLHTHQRVHTEEKPYECNECGKRFSLSGNLDIHQRVHTGEKPYKCE 428

Query: 342 SCG*SFIEAT 313
            CG  F  A+
Sbjct: 429 ECGKGFSSAS 438

>RPOB_LACPL (Q88XZ3) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1204

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +3

Query: 420 TPYDDGDWSGERVQDRIERLCADAASVSIRLLHILPRNQDSLLRKDAATWRS 575
           TPY   DW+  +V D+I+ L AD     +      P N D    +D    R+
Sbjct: 553 TPYRRVDWTTHKVTDKIDYLAADEEDQFVIAQANSPLNDDGSFVEDTVLARN 604

>EFTS_TREDE (P61339) Elongation factor Ts (EF-Ts)|
          Length = 280

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +1

Query: 325 EGLATGRRFIHNNPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQL 501
           EG+  G+  I  +  ++    Q+FV+   L     M E+G E G   +LS  V+ QL L
Sbjct: 222 EGIVKGK--ISKHLSEICFLEQAFVKDDKLSVSKKMAEVGKEAGGSLSLSKLVIFQLGL 278

>RACF2_DICDI (Q9GPS3) RAS-related protein racF2|
          Length = 193

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
 Frame = +3

Query: 351 YTQQPSPSRSCLTVV---CAAWLLDGTPYDDGDW--SGERVQDRIERLCADAASVSIRLL 515
           YT    PS    TV    CA  +LDG PY  G W  +G+   DR+  L      V +   
Sbjct: 23  YTTNGFPSEYLPTVFDNYCANLMLDGKPYSLGLWDTAGQEEYDRLRPLSYPQTDVFLICF 82

Query: 516 HILPRN 533
            I+ ++
Sbjct: 83  SIISQS 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,483,948
Number of Sequences: 219361
Number of extensions: 1717086
Number of successful extensions: 4821
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4819
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)