| Clone Name | baal11b18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC156164.2| Mus musculus BAC clone RP24-75M13 from chromosome 9, complete sequence Length = 183015 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 147 agtgtggcttttttccctctcc 168 |||||||||||||||||||||| Sbjct: 151295 agtgtggcttttttccctctcc 151274
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 tccttccgtggcaacgcacgg 186 ||||||||||||||||||||| Sbjct: 316897 tccttccgtggcaacgcacgg 316877
>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence Length = 196085 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 ggcttttttccctctccttcc 172 ||||||||||||||||||||| Sbjct: 80219 ggcttttttccctctccttcc 80199
>gb|AC084596.1|CBRG42F08 Caenorhabditis briggsae cosmid G42F08, complete sequence Length = 44999 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 563 agcattccctgcaattcttgatttg 587 ||||||| ||||||||||||||||| Sbjct: 260 agcattctctgcaattcttgatttg 284
>gb|AY105729.1| Zea mays PCO132095 mRNA sequence Length = 759 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 cttccgtggcaacgcacgggc 188 ||||||||||||||||||||| Sbjct: 514 cttccgtggcaacgcacgggc 494
>gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, complete sequence Length = 162813 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 catttcagagcctggacata 556 |||||||||||||||||||| Sbjct: 25145 catttcagagcctggacata 25126
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 cttccgtggcaacgcacggg 187 |||||||||||||||||||| Sbjct: 34458 cttccgtggcaacgcacggg 34439
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tccgtggcaacgcacgggcg 189 |||||||||||||||||||| Sbjct: 202511 tccgtggcaacgcacgggcg 202530
>gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosome 12, complete sequence Length = 211170 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 537 catttcagagcctggacataaatttcag 564 |||||||| |||||||||||||||||| Sbjct: 25386 catttcagttcctggacataaatttcag 25413
>gb|AC147359.2| Xenopus tropicalis clone CH216-79G22, complete sequence Length = 165587 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 ttttttccctctccttccgtggca 178 |||||||||||||||||| ||||| Sbjct: 66583 ttttttccctctccttccctggca 66560
>gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome 12, complete sequence Length = 209276 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 537 catttcagagcctggacataaatttcag 564 |||||||| |||||||||||||||||| Sbjct: 146692 catttcagttcctggacataaatttcag 146665
>emb|AL391336.19| Human DNA sequence from clone RP11-524K14 on chromosome 6 Contains part of a novel gene, complete sequence Length = 118331 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 actttgagaggctgaactgaagaa 393 ||||||| |||||||||||||||| Sbjct: 81765 actttgacaggctgaactgaagaa 81742
>gb|AC008040.7| Homo sapiens 3 BAC RP11-379K17 (Roswell Park Cancer Institue Human BAC Library) complete sequence Length = 204917 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 attttctatgtgattagtgt 151 |||||||||||||||||||| Sbjct: 103787 attttctatgtgattagtgt 103806
>gb|AC138581.23| Pan troglodytes clone ptb-142b7, complete sequence Length = 199928 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 agtgtggcttttttccctctcctt 170 ||||||| |||||||||||||||| Sbjct: 29048 agtgtgggttttttccctctcctt 29025
>gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, complete sequence Length = 205264 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 catttcagagcctggacata 556 |||||||||||||||||||| Sbjct: 97966 catttcagagcctggacata 97985
>gb|AC006285.13| Homo sapiens chromosome 22 clone p1087l10 map 22q11, complete sequence Length = 150172 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 agtgtggcttttttccctctcctt 170 ||||||| |||||||||||||||| Sbjct: 94509 agtgtggtttttttccctctcctt 94532
>gb|AC016025.14| Homo sapiens chromosome 22 clone b342k14 map 22q11, complete sequence Length = 180269 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 agtgtggcttttttccctctcctt 170 ||||||| |||||||||||||||| Sbjct: 50307 agtgtggtttttttccctctcctt 50330
>gb|AC025040.7|AC025040 Homo sapiens chromosome 15 clone CTD-2647E9 map 15q21.1, complete sequence Length = 173394 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gcaagtgattttttgttctt 314 |||||||||||||||||||| Sbjct: 25044 gcaagtgattttttgttctt 25025
>gb|AC068143.4|T2D23 Sequence of BAC T2D23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 41039 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 acacatgcaagctaacattgatcaatta 89 |||||||||||| ||||||||| ||||| Sbjct: 10321 acacatgcaagcaaacattgatgaatta 10348
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 taaacatattttctatgtga 144 |||||||||||||||||||| Sbjct: 813938 taaacatattttctatgtga 813957
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 taaacatattttctatgtga 144 |||||||||||||||||||| Sbjct: 1141544 taaacatattttctatgtga 1141525
>gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosome 8, complete sequence Length = 195034 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tttttgttcttattgacgac 323 |||||||||||||||||||| Sbjct: 167421 tttttgttcttattgacgac 167440
>gb|AF086412.1|HUMZD77D08 Homo sapiens full length insert cDNA clone ZD77D08 Length = 538 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 agtgtggcttttttccctctcctt 170 ||||||| |||||||||||||||| Sbjct: 141 agtgtggtttttttccctctcctt 164
>gb|AC139323.4| Mus musculus BAC clone RP24-383P22 from 13, complete sequence Length = 231965 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 aagtgattttttgttcttat 316 |||||||||||||||||||| Sbjct: 180147 aagtgattttttgttcttat 180166
>gb|AC126450.4| Mus musculus BAC clone RP23-379J7 from 3, complete sequence Length = 159914 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 tatgctcccattgcaaggca 124 |||||||||||||||||||| Sbjct: 36649 tatgctcccattgcaaggca 36668 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,876,834 Number of Sequences: 3902068 Number of extensions: 5876834 Number of successful extensions: 123462 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123388 Number of HSP's gapped (non-prelim): 74 length of query: 643 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 620 effective length of database: 17,143,297,704 effective search space: 10628844576480 effective search space used: 10628844576480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)