ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal11b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 440 e-120
2dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 440 e-120
3ref|NM_193993.1| Oryza sativa (japonica cultivar-group), predic... 182 9e-43
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
5dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
6gb|DQ210445.1| Maxillaria concavilabia 18S ribosomal RNA gene, p... 42 2.2
7gb|DQ210307.1| Maxillaria cerifera 18S ribosomal RNA gene, parti... 42 2.2
8gb|DQ210167.1| Maxillaria notylioglossa 18S ribosomal RNA gene, ... 42 2.2
9gb|DQ210117.1| Maxillaria cerifera 18S ribosomal RNA gene, parti... 42 2.2
10gb|DQ210114.1| Maxillaria notylioglossa 18S ribosomal RNA gene, ... 42 2.2
11gb|DQ210045.1| Maxillaria neglecta 18S ribosomal RNA gene, parti... 42 2.2
12emb|AL451136.11| Human DNA sequence from clone RP11-291L19 on ch... 42 2.2
13ref|XM_500221.1| Yarrowia lipolytica CLIB122, YALI0A18898g predi... 42 2.2
14emb|AL596169.1| Listeria innocua Clip11262 complete genome, segm... 42 2.2
15gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, comple... 42 2.2
16gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D14... 42 2.2
17gb|AY168637.1| Baboon herpesvirus 2 strain X313/860 DNA polymera... 42 2.2
18gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 42 2.2
19emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 42 2.2
20gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.5
21emb|Z82072.1|CEW05H12 Caenorhabditis elegans Cosmid W05H12, comp... 40 8.5
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
23dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.5
24dbj|AK111522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
25gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
26emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396... 40 8.5
27emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.5

>dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G03, full
           insert sequence
          Length = 1683

 Score =  440 bits (222), Expect = e-120
 Identities = 372/422 (88%)
 Strand = Plus / Plus

                                                                       
Query: 206 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 265
           ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 207 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 266

                                                                       
Query: 266 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 325
           |||||||| || |||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 267 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 326

                                                                       
Query: 326 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 385
           || || ||||||||||||||||||||||||   ||||||||||||||  | || || || 
Sbjct: 327 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 386

                                                                       
Query: 386 gcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgcttgagaatagct 445
           ||||||||||||||||  |||||||||||||| ||||||||||||||||| || | ||||
Sbjct: 387 gcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgcttaaggacagct 446

                                                                       
Query: 446 ttgcgagattacaatctcaaatttggcacagtacttaatgatccagacatggcgccattc 505
            |||||||||| |||||||| ||||| ||  ||||||||||||| ||| |||| || |||
Sbjct: 447 ctgcgagattataatctcaagtttggtactatacttaatgatcctgacttggcaccgttc 506

                                                                       
Query: 506 agggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaagatatt 565
           ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 507 agggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaagatatt 566

                                                                       
Query: 566 ggttctggattccgaagagatctaaagcttattagtgaagtacaagcaccatttcgtggt 625
           |||||||| ||||||||||| || || || ||||||||||||||||||||||||||||||
Sbjct: 567 ggttctgggttccgaagagacctgaaactcattagtgaagtacaagcaccatttcgtggt 626

             
Query: 626 gt 627
           ||
Sbjct: 627 gt 628



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>dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G10, full
           insert sequence
          Length = 1542

 Score =  440 bits (222), Expect = e-120
 Identities = 372/422 (88%)
 Strand = Plus / Plus

                                                                       
Query: 206 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 265
           ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 209 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 268

                                                                       
Query: 266 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 325
           |||||||| || |||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 269 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 328

                                                                       
Query: 326 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 385
           || || ||||||||||||||||||||||||   ||||||||||||||  | || || || 
Sbjct: 329 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 388

                                                                       
Query: 386 gcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgcttgagaatagct 445
           ||||||||||||||||  |||||||||||||| ||||||||||||||||| || | ||||
Sbjct: 389 gcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgcttaaggacagct 448

                                                                       
Query: 446 ttgcgagattacaatctcaaatttggcacagtacttaatgatccagacatggcgccattc 505
            |||||||||| |||||||| ||||| ||  ||||||||||||| ||| |||| || |||
Sbjct: 449 ctgcgagattataatctcaagtttggtactatacttaatgatcctgacttggcaccgttc 508

                                                                       
Query: 506 agggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaagatatt 565
           ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 509 agggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaagatatt 568

                                                                       
Query: 566 ggttctggattccgaagagatctaaagcttattagtgaagtacaagcaccatttcgtggt 625
           |||||||| ||||||||||| || || || ||||||||||||||||||||||||||||||
Sbjct: 569 ggttctgggttccgaagagacctgaaactcattagtgaagtacaagcaccatttcgtggt 628

             
Query: 626 gt 627
           ||
Sbjct: 629 gt 630



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>ref|NM_193993.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 813

 Score =  182 bits (92), Expect = 9e-43
 Identities = 170/196 (86%)
 Strand = Plus / Plus

                                                                       
Query: 206 ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 265
           ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 184 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 243

                                                                       
Query: 266 gtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgcacttgaacaattt 325
           |||||||| || |||||| ||||||||||||||||||||||||| || ||||||||||||
Sbjct: 244 gtcaacctgggactcgagctcttctccaagggcagggtgaaggatgctcttgaacaattt 303

                                                                       
Query: 326 gacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcgttctataacaag 385
           || || ||||||||||||||||||||||||   ||||||||||||||  | || || || 
Sbjct: 304 gagaatgccctagagctgaatccaaatcctgttgaagcccaagcagcactatacaataaa 363

                           
Query: 386 gcatgctgccatgcat 401
           ||||||||||||||||
Sbjct: 364 gcatgctgccatgcat 379



 Score =  180 bits (91), Expect = 4e-42
 Identities = 118/127 (92%)
 Strand = Plus / Plus

                                                                       
Query: 501 cattcagggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaag 560
           |||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 377 catttagggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaag 436

                                                                       
Query: 561 atattggttctggattccgaagagatctaaagcttattagtgaagtacaagcaccatttc 620
           ||||||||||||| ||||||||||| || || || |||||||||||||||||||||||||
Sbjct: 437 atattggttctgggttccgaagagacctgaaactcattagtgaagtacaagcaccatttc 496

                  
Query: 621 gtggtgt 627
           |||||||
Sbjct: 497 gtggtgt 503



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 8e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                            
Query: 403      cagggaagaaagcaaaaaagctgcagattgcttgagaatagctttgcgagattacaatct 462
                ||||||||||||||| ||||||||||||||||| || | |||| |||||||||| |||||
Sbjct: 14493898 cagggaagaaagcaacaaagctgcagattgcttaaggacagctctgcgagattataatct 14493839

                                                                            
Query: 463      caaatttggcacagtacttaatgatccagacatggcgccattcagggcatcaccagaatt 522
                ||| ||||| ||  ||||||||||||| ||| |||| || |||||||||||||| |||||
Sbjct: 14493838 caagtttggtactatacttaatgatcctgacttggcaccgttcagggcatcaccggaatt 14493779

                                    
Query: 523      taaggaacttcaagaggagg 542
                 |||||||||||||| ||||
Sbjct: 14493778 caaggaacttcaagaagagg 14493759



 Score =  135 bits (68), Expect = 2e-28
 Identities = 83/88 (94%)
 Strand = Plus / Minus

                                                                            
Query: 540      aggcattgcgtggtggagaagatattggttctggattccgaagagatctaaagcttatta 599
                |||||||||||||||||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 14493237 aggcattgcgtggtggagaagatattggttctgggttccgaagagacctgaaactcatta 14493178

                                            
Query: 600      gtgaagtacaagcaccatttcgtggtgt 627
                ||||||||||||||||||||||||||||
Sbjct: 14493177 gtgaagtacaagcaccatttcgtggtgt 14493150



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 301      ggtgaaggacgcacttgaacaatttgacaaggccctagagctgaatccaaatcctaccga 360
                ||||||||| || |||||||||||||| || ||||||||||||||||||||||||   ||
Sbjct: 14494086 ggtgaaggatgctcttgaacaatttgagaatgccctagagctgaatccaaatcctgttga 14494027

                                                         
Query: 361      agcccaagcagcgttctataacaaggcatgctgccatgcat 401
                ||||||||||||  | || || || ||||||||||||||||
Sbjct: 14494026 agcccaagcagcactatacaataaagcatgctgccatgcat 14493986



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                            
Query: 206      ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 265
                ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 14495804 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 14495745

                                                        
Query: 266      gtcaacctcggcctcgagttcttctccaagggcagggtga 305
                |||||||| || |||||| |||||||||||||||||||||
Sbjct: 14495744 gtcaacctgggactcgagctcttctccaagggcagggtga 14495705



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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score =  143 bits (72), Expect = 8e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                         
Query: 403   cagggaagaaagcaaaaaagctgcagattgcttgagaatagctttgcgagattacaatct 462
             ||||||||||||||| ||||||||||||||||| || | |||| |||||||||| |||||
Sbjct: 53211 cagggaagaaagcaacaaagctgcagattgcttaaggacagctctgcgagattataatct 53152

                                                                         
Query: 463   caaatttggcacagtacttaatgatccagacatggcgccattcagggcatcaccagaatt 522
             ||| ||||| ||  ||||||||||||| ||| |||| || |||||||||||||| |||||
Sbjct: 53151 caagtttggtactatacttaatgatcctgacttggcaccgttcagggcatcaccggaatt 53092

                                 
Query: 523   taaggaacttcaagaggagg 542
              |||||||||||||| ||||
Sbjct: 53091 caaggaacttcaagaagagg 53072



 Score =  135 bits (68), Expect = 2e-28
 Identities = 83/88 (94%)
 Strand = Plus / Minus

                                                                         
Query: 540   aggcattgcgtggtggagaagatattggttctggattccgaagagatctaaagcttatta 599
             |||||||||||||||||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 52550 aggcattgcgtggtggagaagatattggttctgggttccgaagagacctgaaactcatta 52491

                                         
Query: 600   gtgaagtacaagcaccatttcgtggtgt 627
             ||||||||||||||||||||||||||||
Sbjct: 52490 gtgaagtacaagcaccatttcgtggtgt 52463



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                         
Query: 301   ggtgaaggacgcacttgaacaatttgacaaggccctagagctgaatccaaatcctaccga 360
             ||||||||| || |||||||||||||| || ||||||||||||||||||||||||   ||
Sbjct: 53399 ggtgaaggatgctcttgaacaatttgagaatgccctagagctgaatccaaatcctgttga 53340

                                                      
Query: 361   agcccaagcagcgttctataacaaggcatgctgccatgcat 401
             ||||||||||||  | || || || ||||||||||||||||
Sbjct: 53339 agcccaagcagcactatacaataaagcatgctgccatgcat 53299



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                         
Query: 206   ccgtctccccctccttcgccggagaaggcggtcgaggcggctccgacggcggagtcgtgc 265
             ||||||||||| || ||||||| ||||| ||  | ||| |  ||||||||||||||||||
Sbjct: 55117 ccgtctcccccgccatcgccggggaaggaggcggtggctgtcccgacggcggagtcgtgc 55058

                                                     
Query: 266   gtcaacctcggcctcgagttcttctccaagggcagggtga 305
             |||||||| || |||||| |||||||||||||||||||||
Sbjct: 55057 gtcaacctgggactcgagctcttctccaagggcagggtga 55018



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>gb|DQ210445.1| Maxillaria concavilabia 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 198 cgtcgcccccgtctccccctc 218
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156



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>gb|DQ210307.1| Maxillaria cerifera 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 773

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 198 cgtcgcccccgtctccccctc 218
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156



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>gb|DQ210167.1| Maxillaria notylioglossa 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 774

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 198 cgtcgcccccgtctccccctc 218
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156



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>gb|DQ210117.1| Maxillaria cerifera 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 776

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 198 cgtcgcccccgtctccccctc 218
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156



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>gb|DQ210114.1| Maxillaria notylioglossa 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 774

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 198 cgtcgcccccgtctccccctc 218
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156



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>gb|DQ210045.1| Maxillaria neglecta 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 198 cgtcgcccccgtctccccctc 218
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156



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>emb|AL451136.11| Human DNA sequence from clone RP11-291L19 on chromosome 1 Contains the 5'
              end of the TESK2 gene for testis-specific kinase 2, a
              peptidylprolyl isomerase A (cyclophilin A) (PPIA)
              pseudogene, a novel gene, a novel gene (DKFZP564I122) and
              the 3' end of the PRDX1 gene for peroxiredoxin 1, complete
              sequence
          Length = 137143

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 399    catacagggaagaaagcaaaaaagc 423
              |||||||||||||||||| ||||||
Sbjct: 102678 catacagggaagaaagcataaaagc 102702



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>ref|XM_500221.1| Yarrowia lipolytica CLIB122, YALI0A18898g predicted mRNA
          Length = 1407

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 265  cgtcaacctcggcctcgagttcttc 289
            ||||||||||||||||| |||||||
Sbjct: 1030 cgtcaacctcggcctcgggttcttc 1006



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>emb|AL596169.1| Listeria innocua Clip11262 complete genome, segment 7/12
          Length = 239050

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 448    gcgagattacaatctcaaatt 468
              |||||||||||||||||||||
Sbjct: 179238 gcgagattacaatctcaaatt 179258



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>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 64   aacccacctttcccttctctc 84
            |||||||||||||||||||||
Sbjct: 5189 aacccacctttcccttctctc 5169



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>gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D1456) genomic sequence
          Length = 44117

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 242   gcggctccgacggcggagtcg 262
             |||||||||||||||||||||
Sbjct: 28957 gcggctccgacggcggagtcg 28937



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>gb|AY168637.1| Baboon herpesvirus 2 strain X313/860 DNA polymerase gene, partial
           cds
          Length = 1702

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 188 aacgcgtcctcgtcgcccccg 208
           |||||||||||||||||||||
Sbjct: 515 aacgcgtcctcgtcgcccccg 495



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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   aacgcgtcctcgtcgcccccg 208
             |||||||||||||||||||||
Sbjct: 65359 aacgcgtcctcgtcgcccccg 65339



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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 265     cgtcaacctcggcctcgagttcttc 289
               ||||||||||||||||| |||||||
Sbjct: 2033742 cgtcaacctcggcctcgggttcttc 2033718



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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 84      cggccggcggcggaatccccaacc 107
               ||||| ||||||||||||||||||
Sbjct: 3837167 cggcccgcggcggaatccccaacc 3837190



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>emb|Z82072.1|CEW05H12 Caenorhabditis elegans Cosmid W05H12, complete sequence
          Length = 9614

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 215  cctccttcgccggagaaggc 234
            ||||||||||||||||||||
Sbjct: 2435 cctccttcgccggagaaggc 2454



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 200      tcgcccccgtctccccctcc 219
                ||||||||||||||||||||
Sbjct: 23668544 tcgcccccgtctccccctcc 23668563



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     aggcggtcgaggcggctccg 250
               ||||||||||||||||||||
Sbjct: 2942267 aggcggtcgaggcggctccg 2942248



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>dbj|AK111522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M11, full
           insert sequence
          Length = 2776

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 tcgcccccgtctccccctcc 219
           ||||||||||||||||||||
Sbjct: 229 tcgcccccgtctccccctcc 248



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 200      tcgcccccgtctccccctcc 219
                ||||||||||||||||||||
Sbjct: 23596731 tcgcccccgtctccccctcc 23596750



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>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157690

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   tcgcccccgtctccccctcc 219
             ||||||||||||||||||||
Sbjct: 37866 tcgcccccgtctccccctcc 37847



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>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128795

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   tcgcccccgtctccccctcc 219
             ||||||||||||||||||||
Sbjct: 87078 tcgcccccgtctccccctcc 87059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,869,131
Number of Sequences: 3902068
Number of extensions: 4869131
Number of successful extensions: 98934
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98609
Number of HSP's gapped (non-prelim): 320
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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