ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal11a19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LBD2_ARATH (Q9LNB9) Putative LOB domain protein 2 33 0.37
2KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin as... 28 0.93
3ARO1_SCHPO (Q9P7R0) Pentafunctional AROM polypeptide [Includes: ... 30 2.4
4KI13B_HUMAN (Q9NQT8) Kinesin-like protein KIF13B (Kinesin-like p... 29 4.1
5KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-as... 27 4.8
6TRPV5_RABIT (Q9XSM3) Transient receptor potential cation channel... 29 5.4
7PSTA_DICDI (P11976) Prestalk protein precursor 28 7.1
8TFF2_PIG (P01359) Trefoil factor 2 precursor (Spasmolytic polype... 28 9.2
9FTSB_NEIMB (P64161) Cell division protein ftsB homolog 28 9.2
10FTSB_NEIMA (P64160) Cell division protein ftsB homolog 28 9.2

>LBD2_ARATH (Q9LNB9) Putative LOB domain protein 2|
          Length = 205

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
 Frame = -1

Query: 415 QVYSLSS--KLSVATRRVDRSRMSESMLCMSLWNGWIPIVMSFA---RVCSSFSIDKGKL 251
           +V+ +S+  K+    R  DR+++S+S+   +LW    P++ S+    R+C    + K  +
Sbjct: 57  KVFGVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKSLV 116

Query: 250 QQQPVL 233
             QP++
Sbjct: 117 HNQPLI 122



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>KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin associated|
           protein 16.1)
          Length = 105

 Score = 27.7 bits (60), Expect(2) = 0.93
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +2

Query: 17  GGRVAGFNNCGAITGMSCIASSMGLPCCSSG 109
           G    G   CG   G  C +S  G  CC SG
Sbjct: 59  GSGCGGCGGCGGCGGGCCGSSCCGSSCCGSG 89



 Score = 22.7 bits (47), Expect(2) = 0.93
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 225 SCCSTGCC 248
           SCC +GCC
Sbjct: 84  SCCGSGCC 91



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>ARO1_SCHPO (Q9P7R0) Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate|
            synthase (EC 4.2.3.4); 3-dehydroquinate dehydratase (EC
            4.2.1.10) (3-dehydroquinase); Shikimate dehydrogenase (EC
            1.1.1.25); Shikimate kinase (EC 2.7.1.71);
            3-phosphoshikima
          Length = 1573

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 159  WLHVRRRWSWSQPHGWRPELQQGRPIEEAIQLI 61
            W  +   WSW++PH W  +++      + I+L+
Sbjct: 1181 WHDLSGTWSWARPHEWMQKVELASSYADVIKLV 1213



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>KI13B_HUMAN (Q9NQT8) Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)|
          Length = 1826

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 150  VRRRWSWSQPHGWRPELQQGRPIEEAIQLIPVIAPQLLNPATL 22
            V+   SW       P+L +G P++E + LI  +  QL +PA +
Sbjct: 1221 VKAEASWDSAVHGCPQLSRGTPVDERLFLIVRVTVQLSHPADM 1263



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>KR511_HUMAN (Q6L8G4) Keratin-associated protein 5-11 (Keratin-associated|
           protein 5.11) (Ultrahigh sulfur keratin-associated
           protein 5.11)
          Length = 156

 Score = 26.9 bits (58), Expect(2) = 4.8
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
 Frame = +2

Query: 11  SVGGRVAGFNNCGAITG----MSCIASSMGLPCCSS 106
           S GG   G  +CG+  G      C  S+   PCCSS
Sbjct: 59  SCGGSKGGCGSCGSSKGGCGSCGCSQSNCCKPCCSS 94



 Score = 20.8 bits (42), Expect(2) = 4.8
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +3

Query: 213 YTADSCCSTGCCC 251
           +   S CS  CCC
Sbjct: 100 FCCQSSCSKPCCC 112



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>TRPV5_RABIT (Q9XSM3) Transient receptor potential cation channel subfamily V|
           member 5 (TrpV5) (osm-9-like TRP channel 3) (OTRPC3)
           (Epithelial calcium channel 1) (ECaC1)
          Length = 730

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 207 SYYTADSCCSTGCCCNLPLSMEKEEHTRAKDITI 308
           S Y     C T CC   PL +  +  T  +DITI
Sbjct: 334 SLYILYMICFTTCCIYRPLKLRDDNRTDPRDITI 367



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>PSTA_DICDI (P11976) Prestalk protein precursor|
          Length = 1046

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 180  HRERNS*NFSYYTADSCCSTGC 245
            H   N  + ++ T DSCCSTGC
Sbjct: 957  HTPMNCDDGNFCTLDSCCSTGC 978



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>TFF2_PIG (P01359) Trefoil factor 2 precursor (Spasmolytic polypeptide) (SP)|
           (Pancreatic spasmolytic polypeptide) (PSP) (Fragment)
          Length = 127

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +3

Query: 102 APGAIRGVGSSSSAGEREATASRRRKHRERNS*N--FSYYTADSCCSTGCC 248
           APG     G+    G ++  A R  +   +N  N  F   T+D C ++GCC
Sbjct: 6   APGHPPPAGAVCLTGAQKPAACRCSRQDPKNRVNCGFPGITSDQCFTSGCC 56



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>FTSB_NEIMB (P64161) Cell division protein ftsB homolog|
          Length = 92

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -1

Query: 316 WIPIVMSFARVCSSFSI--DKGKLQQQPVLQQLSAV 215
           W+ +V+SFA VC  +S+   KG + +   L++  AV
Sbjct: 3   WVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAV 38



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>FTSB_NEIMA (P64160) Cell division protein ftsB homolog|
          Length = 92

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -1

Query: 316 WIPIVMSFARVCSSFSI--DKGKLQQQPVLQQLSAV 215
           W+ +V+SFA VC  +S+   KG + +   L++  AV
Sbjct: 3   WVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAV 38


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,081,505
Number of Sequences: 219361
Number of extensions: 986750
Number of successful extensions: 3261
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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