ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak44m13 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ938078.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 9 (rr9 gene) Length = 606 Score = 289 bits (146), Expect = 6e-75 Identities = 245/278 (88%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 205 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 264 Query: 248 aagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 ||||||||||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 265 aagatcaaggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataac 324 Query: 308 ataccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacca 367 || ||||| || || || |||||||||||||||||||| |||| || ||||| |||||| Sbjct: 325 attccttcaaggatcaatagatgcctggaggaaggagctgatgaatttttcctcaaacca 384 Query: 368 gtacggctatcagacatgagcaagctcaagccccatataatgaaaagcagatgcaaggag 427 || ||||| || |||||||||||||| |||||||| ||| |||||||||||||||||||| Sbjct: 385 gttcggctctccgacatgagcaagctgaagccccacatactgaaaagcagatgcaaggag 444 Query: 428 cactcccacgaggaccaagacctgctaagcaacagcga 465 |||| ||| |||| ||| |||||| |||||||||||| Sbjct: 445 cactaccagcaggaacaaaacctgcaaagcaacagcga 482 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 24 gttccatgtcctggcggtggatgatagccttcctgacaggaagctcatcgagaggctact 83 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggctctccagttctt 120 |||||| ||||| ||||||||||||||||| ||||| |||| ||||||||| ||||||| Sbjct: 84 caagacctcttctttccaagttaccactgttgattccgggagcaaggctctggagttctt 143 Query: 121 ggggctccatg 131 ||||||||||| Sbjct: 144 ggggctccatg 154
>dbj|AB249660.1| Oryza sativa (japonica cultivar-group) OsRR10 mRNA for typeA response regulator 10, complete cds Length = 606 Score = 289 bits (146), Expect = 6e-75 Identities = 245/278 (88%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 205 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 264 Query: 248 aagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 ||||||||||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 265 aagatcaaggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataac 324 Query: 308 ataccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacca 367 || ||||| || || || |||||||||||||||||||| |||| || ||||| |||||| Sbjct: 325 attccttcaaggatcaatagatgcctggaggaaggagctgatgaatttttcctcaaacca 384 Query: 368 gtacggctatcagacatgagcaagctcaagccccatataatgaaaagcagatgcaaggag 427 || ||||| || |||||||||||||| |||||||| ||| |||||||||||||||||||| Sbjct: 385 gttcggctctccgacatgagcaagctgaagccccacatactgaaaagcagatgcaaggag 444 Query: 428 cactcccacgaggaccaagacctgctaagcaacagcga 465 |||| ||| |||| ||| |||||| |||||||||||| Sbjct: 445 cactaccagcaggaacaacacctgcaaagcaacagcga 482 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 24 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 83 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggctctccagttctt 120 |||||| ||||| |||||||| |||||||| ||||| |||| ||||||||| ||||||| Sbjct: 84 caagacctcttctttccaagtaaccactgttgattcggggagcaaggctctggagttctt 143 Query: 121 ggggctccatg 131 ||||||||||| Sbjct: 144 ggggctccatg 154
>dbj|AB249659.1| Oryza sativa (japonica cultivar-group) OsRR9 mRNA for typeA response regulator 9, complete cds Length = 606 Score = 289 bits (146), Expect = 6e-75 Identities = 245/278 (88%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 205 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 264 Query: 248 aagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 ||||||||||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 265 aagatcaaggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataac 324 Query: 308 ataccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacca 367 || ||||| || || || |||||||||||||||||||| |||| || ||||| |||||| Sbjct: 325 attccttcaaggatcaatagatgcctggaggaaggagctgatgaatttttcctcaaacca 384 Query: 368 gtacggctatcagacatgagcaagctcaagccccatataatgaaaagcagatgcaaggag 427 || ||||| || |||||||||||||| |||||||| ||| |||||||||||||||||||| Sbjct: 385 gttcggctctccgacatgagcaagctgaagccccacatactgaaaagcagatgcaaggag 444 Query: 428 cactcccacgaggaccaagacctgctaagcaacagcga 465 |||| ||| |||| ||| |||||| |||||||||||| Sbjct: 445 cactaccagcaggaacaaaacctgcaaagcaacagcga 482 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 24 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 83 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggctctccagttctt 120 |||||| ||||| ||||||||||||||||| ||||| |||| ||||||||| ||||||| Sbjct: 84 caagacctcttctttccaagttaccactgttgattccgggagcaaggctctggagttctt 143 Query: 121 ggggctccatg 131 ||||||||||| Sbjct: 144 ggggctccatg 154
>dbj|AK058585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G01, full insert sequence Length = 919 Score = 289 bits (146), Expect = 6e-75 Identities = 245/278 (88%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 294 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 353 Query: 248 aagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 ||||||||||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 354 aagatcaaggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataac 413 Query: 308 ataccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacca 367 || ||||| || || || |||||||||||||||||||| |||| || ||||| |||||| Sbjct: 414 attccttcaaggatcaatagatgcctggaggaaggagctgatgaatttttcctcaaacca 473 Query: 368 gtacggctatcagacatgagcaagctcaagccccatataatgaaaagcagatgcaaggag 427 || ||||| || |||||||||||||| |||||||| ||| |||||||||||||||||||| Sbjct: 474 gttcggctctccgacatgagcaagctgaagccccacatactgaaaagcagatgcaaggag 533 Query: 428 cactcccacgaggaccaagacctgctaagcaacagcga 465 |||| ||| |||| ||| |||||| |||||||||||| Sbjct: 534 cactaccagcaggaacaaaacctgcaaagcaacagcga 571 Score = 149 bits (75), Expect = 1e-32 Identities = 117/131 (89%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 113 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 172 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggctctccagttctt 120 |||||| ||||| ||||||||||||||||| ||||| |||| ||||||||| ||||||| Sbjct: 173 caagacctcttctttccaagttaccactgttgattccgggagcaaggctctggagttctt 232 Query: 121 ggggctccatg 131 ||||||||||| Sbjct: 233 ggggctccatg 243
>dbj|AK120926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P07, full insert sequence Length = 825 Score = 281 bits (142), Expect = 1e-72 Identities = 244/278 (87%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 287 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 346 Query: 248 aagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 |||||| |||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 347 aagatcgaggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataac 406 Query: 308 ataccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacca 367 || ||||| || || || |||||||||||||||||||| |||| || ||||| |||||| Sbjct: 407 attccttcaaggatcaatagatgcctggaggaaggagctgatgaatttttcctcaaacca 466 Query: 368 gtacggctatcagacatgagcaagctcaagccccatataatgaaaagcagatgcaaggag 427 || ||||| || |||||||||||||| |||||||| ||| |||||||||||||||||||| Sbjct: 467 gttcggctctccgacatgagcaagctgaagccccacatactgaaaagcagatgcaaggag 526 Query: 428 cactcccacgaggaccaagacctgctaagcaacagcga 465 |||| ||| |||| ||| |||||| |||||||||||| Sbjct: 527 cactaccagcaggaacaaaacctgcaaagcaacagcga 564 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 85 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 144 Query: 61 caagacatcttcgttccaag 80 |||||| ||||| ||||||| Sbjct: 145 caagacctcttctttccaag 164 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 79 agttaccactgtggattctgggaccaaggctctccagttcttggggctccatg 131 |||||||||||| ||||| |||| ||||||||| |||||||||||||||||| Sbjct: 184 agttaccactgttgattccgggagcaaggctctggagttcttggggctccatg 236
>gb|AY105961.1| Zea mays PCO076606 mRNA sequence Length = 932 Score = 262 bits (132), Expect = 1e-66 Identities = 210/236 (88%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 360 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgacctgctcaag 419 Query: 248 aagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 ||||||||||||||||||||| |||| || |||||||| ||||||||||| || |||||| Sbjct: 420 aagatcaaggagtcgtcgtctctcagagatatcccggtggtgatcatgtcctctgagaac 479 Query: 308 ataccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacca 367 || ||||| || || || || ||||||||||||||||| | ||||||||||| ||||| Sbjct: 480 attccttcaaggatcaataggtgcctggaggaaggagctgacgagttcttcctaaaacct 539 Query: 368 gtacggctatcagacatgagcaagctcaagccccatataatgaaaagcagatgcaa 423 || |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| Sbjct: 540 gtgcggctatcagacatgaacaagctcaagccccacatactgaaaagcagatgcaa 595 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| ||||| |||||| ||| |||||||||||||||||||||||||| Sbjct: 161 gttccatgtcctggcggtggacgacagcctcccggacaggaagctcatcgagaggctcct 220 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggctctccagttctt 120 |||||| ||||| |||||||| |||||||| || || |||| |||||| || |||||| | Sbjct: 221 caagacctcttccttccaagtgaccactgtcgactccgggagcaaggcgctgcagttcct 280 Query: 121 ggggctccatg 131 ||| ||||||| Sbjct: 281 gggcctccatg 291
>dbj|AB042268.1| Zea mays ZmRR6 mRNA for response regulator 6, complete cds Length = 1158 Score = 262 bits (132), Expect = 1e-66 Identities = 210/236 (88%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 346 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgacctgctcaag 405 Query: 248 aagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 ||||||||||||||||||||| |||| || |||||||| ||||||||||| || |||||| Sbjct: 406 aagatcaaggagtcgtcgtctctcagagatatcccggtggtgatcatgtcctctgagaac 465 Query: 308 ataccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacca 367 || ||||| || || || || ||||||||||||||||| | ||||||||||| ||||| Sbjct: 466 attccttcaaggatcaataggtgcctggaggaaggagctgacgagttcttcctaaaacct 525 Query: 368 gtacggctatcagacatgagcaagctcaagccccatataatgaaaagcagatgcaa 423 || |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| Sbjct: 526 gtgcggctatcagacatgaacaagctcaagccccacatactgaaaagcagatgcaa 581 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| ||||| |||||| ||| |||||||||||||||||||||||||| Sbjct: 147 gttccatgtcctggcggtggacgacagcctcccggacaggaagctcatcgagaggctcct 206 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggctctccagttctt 120 |||||| ||||| |||||||| |||||||| || || |||| |||||| || |||||| | Sbjct: 207 caagacctcttccttccaagtgaccactgtcgactccgggagcaaggcgctgcagttcct 266 Query: 121 ggggctccatg 131 ||| ||||||| Sbjct: 267 gggcctccatg 277
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 145 bits (73), Expect = 2e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 325 cagatgcctggaggaaggagcaaatgagttcttcctgaaaccagtacggctatcagacat 384 ||||||||||||||||||||| |||| || ||||| |||||||| ||||| || ||||| Sbjct: 69186 cagatgcctggaggaaggagctgatgaatttttcctcaaaccagttcggctctccgacat 69245 Query: 385 gagcaagctcaagccccatataatgaaaagcagatgcaaggagcactcccacgaggacca 444 ||||||||| |||||||| ||| |||||||||||||||||||||||| ||| |||| || Sbjct: 69246 gagcaagctgaagccccacatactgaaaagcagatgcaaggagcactaccagcaggaaca 69305 Query: 445 agacctgctaagcaacagcga 465 | |||||| |||||||||||| Sbjct: 69306 aaacctgcaaagcaacagcga 69326 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 68245 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 68304 Query: 248 aagatcaagg 257 |||||||||| Sbjct: 68305 aagatcaagg 68314 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 67846 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 67905 Query: 61 caagacatcttcgttccaag 80 |||||| ||||| ||||||| Sbjct: 67906 caagacctcttctttccaag 67925 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 255 aggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacatacctt 314 |||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 68427 aggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataacattcctt 68486 Query: 315 c 315 | Sbjct: 68487 c 68487 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 79 agttaccactgtggattctgggaccaaggctctccagttcttggggctccatg 131 |||||||||||| ||||| |||| ||||||||| |||||||||||||||||| Sbjct: 68023 agttaccactgttgattccgggagcaaggctctggagttcttggggctccatg 68075
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 145 bits (73), Expect = 2e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 325 cagatgcctggaggaaggagcaaatgagttcttcctgaaaccagtacggctatcagacat 384 ||||||||||||||||||||| |||| || ||||| |||||||| ||||| || ||||| Sbjct: 1916380 cagatgcctggaggaaggagctgatgaatttttcctcaaaccagttcggctctccgacat 1916439 Query: 385 gagcaagctcaagccccatataatgaaaagcagatgcaaggagcactcccacgaggacca 444 ||||||||| |||||||| ||| |||||||||||||||||||||||| ||| |||| || Sbjct: 1916440 gagcaagctgaagccccacatactgaaaagcagatgcaaggagcactaccagcaggaaca 1916499 Query: 445 agacctgctaagcaacagcga 465 | |||||| |||||||||||| Sbjct: 1916500 acacctgcaaagcaacagcga 1916520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1915439 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 1915498 Query: 248 aagatcaagg 257 |||||||||| Sbjct: 1915499 aagatcaagg 1915508 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 1915062 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 1915121 Query: 61 caagacatcttcgttccaag 80 |||||| ||||| ||||||| Sbjct: 1915122 caagacctcttctttccaag 1915141 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 255 aggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacatacctt 314 |||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1915621 aggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataacattcctt 1915680 Query: 315 c 315 | Sbjct: 1915681 c 1915681 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 83 accactgtggattctgggaccaaggctctccagttcttggggctccatg 131 |||||||| ||||| |||| ||||||||| |||||||||||||||||| Sbjct: 1915243 accactgttgattcggggagcaaggctctggagttcttggggctccatg 1915291
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 145 bits (73), Expect = 2e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 325 cagatgcctggaggaaggagcaaatgagttcttcctgaaaccagtacggctatcagacat 384 ||||||||||||||||||||| |||| || ||||| |||||||| ||||| || ||||| Sbjct: 1997631 cagatgcctggaggaaggagctgatgaatttttcctcaaaccagttcggctctccgacat 1997690 Query: 385 gagcaagctcaagccccatataatgaaaagcagatgcaaggagcactcccacgaggacca 444 ||||||||| |||||||| ||| |||||||||||||||||||||||| ||| |||| || Sbjct: 1997691 gagcaagctgaagccccacatactgaaaagcagatgcaaggagcactaccagcaggaaca 1997750 Query: 445 agacctgctaagcaacagcga 465 | |||||| |||||||||||| Sbjct: 1997751 aaacctgcaaagcaacagcga 1997771 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1996690 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 1996749 Query: 248 aagatcaagg 257 |||||||||| Sbjct: 1996750 aagatcaagg 1996759 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 1996291 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 1996350 Query: 61 caagacatcttcgttccaag 80 |||||| ||||| ||||||| Sbjct: 1996351 caagacctcttctttccaag 1996370 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 255 aggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacatacctt 314 |||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1996872 aggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataacattcctt 1996931 Query: 315 c 315 | Sbjct: 1996932 c 1996932 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 79 agttaccactgtggattctgggaccaaggctctccagttcttggggctccatg 131 |||||||||||| ||||| |||| ||||||||| |||||||||||||||||| Sbjct: 1996468 agttaccactgttgattccgggagcaaggctctggagttcttggggctccatg 1996520
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 145 bits (73), Expect = 2e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 325 cagatgcctggaggaaggagcaaatgagttcttcctgaaaccagtacggctatcagacat 384 ||||||||||||||||||||| |||| || ||||| |||||||| ||||| || ||||| Sbjct: 2005412 cagatgcctggaggaaggagctgatgaatttttcctcaaaccagttcggctctccgacat 2005471 Query: 385 gagcaagctcaagccccatataatgaaaagcagatgcaaggagcactcccacgaggacca 444 ||||||||| |||||||| ||| |||||||||||||||||||||||| ||| |||| || Sbjct: 2005472 gagcaagctgaagccccacatactgaaaagcagatgcaaggagcactaccagcaggaaca 2005531 Query: 445 agacctgctaagcaacagcga 465 | |||||| |||||||||||| Sbjct: 2005532 aaacctgcaaagcaacagcga 2005552 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 2004471 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 2004530 Query: 248 aagatcaagg 257 |||||||||| Sbjct: 2004531 aagatcaagg 2004540 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 2004072 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 2004131 Query: 61 caagacatcttcgttccaag 80 |||||| ||||| ||||||| Sbjct: 2004132 caagacctcttctttccaag 2004151 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 255 aggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacatacctt 314 |||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 2004653 aggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataacattcctt 2004712 Query: 315 c 315 | Sbjct: 2004713 c 2004713 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 79 agttaccactgtggattctgggaccaaggctctccagttcttggggctccatg 131 |||||||||||| ||||| |||| ||||||||| |||||||||||||||||| Sbjct: 2004249 agttaccactgttgattccgggagcaaggctctggagttcttggggctccatg 2004301
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 145 bits (73), Expect = 2e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 325 cagatgcctggaggaaggagcaaatgagttcttcctgaaaccagtacggctatcagacat 384 ||||||||||||||||||||| |||| || ||||| |||||||| ||||| || ||||| Sbjct: 1916331 cagatgcctggaggaaggagctgatgaatttttcctcaaaccagttcggctctccgacat 1916390 Query: 385 gagcaagctcaagccccatataatgaaaagcagatgcaaggagcactcccacgaggacca 444 ||||||||| |||||||| ||| |||||||||||||||||||||||| ||| |||| || Sbjct: 1916391 gagcaagctgaagccccacatactgaaaagcagatgcaaggagcactaccagcaggaaca 1916450 Query: 445 agacctgctaagcaacagcga 465 | |||||| |||||||||||| Sbjct: 1916451 acacctgcaaagcaacagcga 1916471 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 1915390 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 1915449 Query: 248 aagatcaagg 257 |||||||||| Sbjct: 1915450 aagatcaagg 1915459 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 1915013 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 1915072 Query: 61 caagacatcttcgttccaag 80 |||||| ||||| ||||||| Sbjct: 1915073 caagacctcttctttccaag 1915092 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 255 aggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacatacctt 314 |||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1915572 aggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataacattcctt 1915631 Query: 315 c 315 | Sbjct: 1915632 c 1915632 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 83 accactgtggattctgggaccaaggctctccagttcttggggctccatg 131 |||||||| ||||| |||| ||||||||| |||||||||||||||||| Sbjct: 1915194 accactgttgattcggggagcaaggctctggagttcttggggctccatg 1915242
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 145 bits (73), Expect = 2e-31 Identities = 124/141 (87%) Strand = Plus / Plus Query: 325 cagatgcctggaggaaggagcaaatgagttcttcctgaaaccagtacggctatcagacat 384 ||||||||||||||||||||| |||| || ||||| |||||||| ||||| || ||||| Sbjct: 111071 cagatgcctggaggaaggagctgatgaatttttcctcaaaccagttcggctctccgacat 111130 Query: 385 gagcaagctcaagccccatataatgaaaagcagatgcaaggagcactcccacgaggacca 444 ||||||||| |||||||| ||| |||||||||||||||||||||||| ||| |||| || Sbjct: 111131 gagcaagctgaagccccacatactgaaaagcagatgcaaggagcactaccagcaggaaca 111190 Query: 445 agacctgctaagcaacagcga 465 | |||||| |||||||||||| Sbjct: 111191 acacctgcaaagcaacagcga 111211 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 110130 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 110189 Query: 248 aagatcaagg 257 |||||||||| Sbjct: 110190 aagatcaagg 110199 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 109753 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 109812 Query: 61 caagacatcttcgttccaag 80 |||||| ||||| ||||||| Sbjct: 109813 caagacctcttctttccaag 109832 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 255 aggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacatacctt 314 |||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 110312 aggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataacattcctt 110371 Query: 315 c 315 | Sbjct: 110372 c 110372 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 83 accactgtggattctgggaccaaggctctccagttcttggggctccatg 131 |||||||| ||||| |||| ||||||||| |||||||||||||||||| Sbjct: 109934 accactgttgattcggggagcaaggctctggagttcttggggctccatg 109982
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 145 bits (73), Expect = 2e-31 Identities = 124/141 (87%) Strand = Plus / Minus Query: 325 cagatgcctggaggaaggagcaaatgagttcttcctgaaaccagtacggctatcagacat 384 ||||||||||||||||||||| |||| || ||||| |||||||| ||||| || ||||| Sbjct: 51841 cagatgcctggaggaaggagctgatgaatttttcctcaaaccagttcggctctccgacat 51782 Query: 385 gagcaagctcaagccccatataatgaaaagcagatgcaaggagcactcccacgaggacca 444 ||||||||| |||||||| ||| |||||||||||||||||||||||| ||| |||| || Sbjct: 51781 gagcaagctgaagccccacatactgaaaagcagatgcaaggagcactaccagcaggaaca 51722 Query: 445 agacctgctaagcaacagcga 465 | |||||| |||||||||||| Sbjct: 51721 acacctgcaaagcaacagcga 51701 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 188 gtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 52782 gtgaacctgatcatcacagactactgcatgcctggcatgacaggatatgatcttctcaag 52723 Query: 248 aagatcaagg 257 |||||||||| Sbjct: 52722 aagatcaagg 52713 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| |||||||| ||| | | |||||||||||||||||||||||| || Sbjct: 53159 gttccatgtcctggctgtggatgatagccttcctgacaggaagctcatcgagaggctact 53100 Query: 61 caagacatcttcgttccaag 80 |||||| ||||| ||||||| Sbjct: 53099 caagacctcttctttccaag 53080 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 255 aggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacatacctt 314 |||| ||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |||| Sbjct: 52600 aggaatcgtcttatttaagggacatcccagttgtgatcatgtcatcggataacattcctt 52541 Query: 315 c 315 | Sbjct: 52540 c 52540 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 83 accactgtggattctgggaccaaggctctccagttcttggggctccatg 131 |||||||| ||||| |||| ||||||||| |||||||||||||||||| Sbjct: 52978 accactgttgattcggggagcaaggctctggagttcttggggctccatg 52930
>gb|AY104728.1| Zea mays PCO113156 mRNA sequence Length = 1312 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 186 acgtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctca 245 ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 341 acgtgaatctcatcatcactgactactgcatgccaggcatgacaggatacgatctgctca 400 Query: 246 agaagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggaga 305 ||| || |||| ||| || || ||| |||||| || || ||||||||||| || |||| Sbjct: 401 agagaatgaaggggtcctcttcgctcaaggacattcctgtggtgatcatgtcgtctgaga 460 Query: 306 a 306 | Sbjct: 461 a 461
>dbj|AB042267.1| Zea mays ZmRR5 mRNA for response regulator 5, complete cds Length = 1654 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 186 acgtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctca 245 ||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 610 acgtgaatctcatcatcactgactactgcatgccaggcatgacaggatacgatctgctca 669 Query: 246 aga 248 ||| Sbjct: 670 aga 672
>dbj|AB042261.1| Zea mays ZmRR4 mRNA for response regulator 4, complete cds Length = 891 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 194 ctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 294 ctcatcatcactgactactgcatgcccggcatgacaggatacgatctgctcaag 347 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| |||| ||||| |||||| || | ||||||||||||||||||| ||| || Sbjct: 74 gttccatgtcctggcggtggacgacagcatcatcgacaggaagctcatcgagatgctgct 133 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggc 108 ||||| || || | |||||| ||||| ||||| || |||| |||||| Sbjct: 134 caagagctcgtcttaccaagtgaccacggtggagtccgggaacaaggc 181
>ref|NM_189771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 699 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 191 aacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaag 250 ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| | Sbjct: 223 aacctgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagg 282 Query: 251 atcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacata 310 | |||| || || || || | |||||| || |||||||||||||| || ||||| | Sbjct: 283 gtgaagggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtg 342 Query: 311 ccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacc 366 ||| | || || ||||| ||| |||| || || ||| | ||||||||||||||||| Sbjct: 343 cctgcaaggatcaacaggtgcttggaagatggtgcagaggagttcttcctgaaacc 398 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| | || |||||||| ||| | | ||||||||||||||||||| ||| || Sbjct: 27 gttccatgtcctcgcggtggatgatagcctgatcgacaggaagctcatcgagatgctgct 86 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggc 108 ||||| || || | |||||| ||||||||||||||||||| |||||| Sbjct: 87 caagaactcgtcctaccaagtgaccactgtggattctgggagcaaggc 134
>emb|AJ938073.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 4 (rr4 gene) Length = 702 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 191 aacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaag 250 ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| | Sbjct: 223 aacctgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagg 282 Query: 251 atcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacata 310 | |||| || || || || | |||||| || |||||||||||||| || ||||| | Sbjct: 283 gtgaagggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtg 342 Query: 311 ccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacc 366 ||| | || || ||||| ||| |||| || || ||| | ||||||||||||||||| Sbjct: 343 cctgcaaggatcaacaggtgcttggaagatggtgcagaggagttcttcctgaaacc 398 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| | || |||||||| ||| | | ||||||||||||||||||| ||| || Sbjct: 27 gttccatgtcctcgcggtggatgatagcctgatcgacaggaagctcatcgagatgctgct 86 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggc 108 ||||| || || | |||||| ||||||||||||||||||| |||||| Sbjct: 87 caagaactcgtcctaccaagtgaccactgtggattctgggagcaaggc 134
>dbj|AB249658.1| Oryza sativa (japonica cultivar-group) OsRR4 mRNA for typeA response regulator 4, complete cds Length = 699 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 191 aacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaag 250 ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| | Sbjct: 223 aacctgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagg 282 Query: 251 atcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacata 310 | |||| || || || || | |||||| || |||||||||||||| || ||||| | Sbjct: 283 gtgaagggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtg 342 Query: 311 ccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacc 366 ||| | || || ||||| ||| |||| || || ||| | ||||||||||||||||| Sbjct: 343 cctgcaaggatcaacaggtgcttggaagatggtgcagaggagttcttcctgaaacc 398 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| | || |||||||| ||| | | ||||||||||||||||||| ||| || Sbjct: 27 gttccatgtcctcgcggtggatgatagcctgatcgacaggaagctcatcgagatgctgct 86 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggc 108 ||||| || || | |||||| ||||||||||||||||||| |||||| Sbjct: 87 caagaactcgtcctaccaagtgaccactgtggattctgggagcaaggc 134
>dbj|AK101721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061A20, full insert sequence Length = 1607 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 191 aacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaag 250 ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| | Sbjct: 634 aacctgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaagagg 693 Query: 251 atcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacata 310 | |||| || || || || | |||||| || |||||||||||||| || ||||| | Sbjct: 694 gtgaagggatcatcttcattgaaggacataccagttgtgatcatgtcttctgagaatgtg 753 Query: 311 ccttccagaattaacagatgcctggaggaaggagcaaatgagttcttcctgaaacc 366 ||| | || || ||||| ||| |||| || || ||| | ||||||||||||||||| Sbjct: 754 cctgcaaggatcaacaggtgcttggaagatggtgcagaggagttcttcctgaaacc 809 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| | || |||||||| ||| | | ||||||||||||||||||| ||| || Sbjct: 438 gttccatgtcctcgcggtggatgatagcctgatcgacaggaagctcatcgagatgctgct 497 Query: 61 caagacatcttcgttccaagttaccactgtggattctgggaccaaggc 108 ||||| || || | |||||| ||||||||||||||||||| |||||| Sbjct: 498 caagaactcgtcctaccaagtgaccactgtggattctgggagcaaggc 545
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 191 aacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaaga 248 ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 41942192 aacctgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaaga 41942249 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| | || |||||||| ||| | | ||||||||||||||||||| ||| || Sbjct: 41941746 gttccatgtcctcgcggtggatgatagcctgatcgacaggaagctcatcgagatgctgct 41941805 Query: 61 caaga 65 ||||| Sbjct: 41941806 caaga 41941810 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 accactgtggattctgggaccaaggc 108 ||||||||||||||||||| |||||| Sbjct: 41941962 accactgtggattctgggagcaaggc 41941987
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 191 aacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctcaaga 248 ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 44269 aacctgataatcactgactactgcatgcctggcatgacagggtatgatctgctcaaga 44326 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1 gttccatgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 |||||||||| | || |||||||| ||| | | ||||||||||||||||||| ||| || Sbjct: 43823 gttccatgtcctcgcggtggatgatagcctgatcgacaggaagctcatcgagatgctgct 43882 Query: 61 caaga 65 ||||| Sbjct: 43883 caaga 43887 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 accactgtggattctgggaccaaggc 108 ||||||||||||||||||| |||||| Sbjct: 44039 accactgtggattctgggagcaaggc 44064
>dbj|AB024291.1| Zea mays ZmRR2 mRNA, complete cds Length = 793 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 186 acgtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctca 245 |||||||| | |||||||| |||||||| ||||| |||||||| || ||||| ||||| | Sbjct: 320 acgtgaacatgatcatcacggactactggatgcccgggatgaccgggtacgagctgctga 379 Query: 246 agaagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggaga 305 || | | |||||||||||| | | ||| ||||||||| ||||||||||| ||||||| Sbjct: 380 agcacgtgaaggagtcgtcggcgctgcgggccatcccggtggtgatcatgtcgtcggaga 439 Query: 306 ac 307 || Sbjct: 440 ac 441
>dbj|AB031012.1| Zea mays ZmRR2 gene for response regulator 2, complete cds Length = 3846 Score = 75.8 bits (38), Expect = 2e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 186 acgtgaacctcatcatcactgactactgcatgcctgggatgacaggatacgatctgctca 245 |||||||| | |||||||| |||||||| ||||| |||||||| || ||||| ||||| | Sbjct: 3373 acgtgaacatgatcatcacggactactggatgcccgggatgaccgggtacgagctgctga 3432 Query: 246 agaagatcaaggagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggaga 305 || | | |||||||||||| | | ||| ||||||||| ||||||||||| ||||||| Sbjct: 3433 agcacgtgaaggagtcgtcggcgctgcgggccatcccggtggtgatcatgtcgtcggaga 3492 Query: 306 ac 307 || Sbjct: 3493 ac 3494
>ref|NM_187101.1| Oryza sativa (japonica cultivar-group), mRNA Length = 621 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| | |||||| || ||||| |||||||||||||||||| Sbjct: 403 atcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatcaag 462 Query: 257 gagtcgtc 264 || ||||| Sbjct: 463 gaatcgtc 470
>emb|AJ938076.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 7 (rr7 gene) Length = 621 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| | |||||| || ||||| |||||||||||||||||| Sbjct: 403 atcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatcaag 462 Query: 257 gagtcgtc 264 || ||||| Sbjct: 463 gaatcgtc 470
>dbj|AB249657.1| Oryza sativa (japonica cultivar-group) OsRR7 mRNA for typeA response regulator 7, complete cds Length = 621 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| | |||||| || ||||| |||||||||||||||||| Sbjct: 403 atcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatcaag 462 Query: 257 gagtcgtc 264 || ||||| Sbjct: 463 gaatcgtc 470
>dbj|AB042260.1| Zea mays ZmRR3 mRNA for response regulator, complete cds Length = 545 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||| || |||||||| ||||| | |||||| |||||||| || ||||||||||||||| Sbjct: 234 atcattaccgactactggatgcccgagatgactggatacgagctcctcaagaagatcaag 293 Query: 257 gagtcgtc 264 |||||||| Sbjct: 294 gagtcgtc 301
>ref|NM_100921.2| Arabidopsis thaliana ARR4 (RESPONSE REGULATOR 4); transcription regulator/ two-component response regulator AT1G10470 (ARR4) mRNA, complete cds Length = 1275 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 472 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 531 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaa 306 || ||||| |||||| || | |||||||| |||||||| |||||||| Sbjct: 532 gaatcgtccaatttcagagaagttccggttgtaatcatgtcgtcggagaa 581
>gb|BT024478.1| Arabidopsis thaliana At1g10470 mRNA, complete cds Length = 780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 274 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 333 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaa 306 || ||||| |||||| || | |||||||| |||||||| |||||||| Sbjct: 334 gaatcgtccaatttcagagaagttccggttgtaatcatgtcgtcggagaa 383
>emb|BX817837.1|CNS0ACFZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 883 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 306 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 365 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaa 306 || ||||| |||||| || | |||||||| |||||||| |||||||| Sbjct: 366 gaatcgtccaatttcagagaagttccggttgtaatcatgtcgtcggagaa 415
>emb|BX817831.1|CNS0ACG5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZH11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 353 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 412 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaa 306 || ||||| |||||| || | |||||||| |||||||| |||||||| Sbjct: 413 gaatcgtccaatttcagagaagttccggttgtaatcatgtcgtcggagaa 462
>dbj|AB010915.1| Arabidopsis thaliana mRNA for responce regulator1, complete cds Length = 1227 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 472 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 531 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaa 306 || ||||| |||||| || | |||||||| |||||||| |||||||| Sbjct: 532 gaatcgtccaatttcagagaagttccggttgtaatcatgtcgtcggagaa 581
>gb|AF057282.1|AF057282 Arabidopsis thaliana two-component response regulator homolog (IBC7) mRNA, complete cds Length = 1056 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 349 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 408 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaa 306 || ||||| |||||| || | |||||||| |||||||| |||||||| Sbjct: 409 gaatcgtccaatttcagagaagttccggttgtaatcatgtcgtcggagaa 458
>dbj|AB008487.1| Arabidopsis thaliana ARR4 mRNA for response regulator 4, complete cds Length = 1193 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 390 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 449 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaa 306 || ||||| |||||| || | |||||||| |||||||| |||||||| Sbjct: 450 gaatcgtccaatttcagagaagttccggttgtaatcatgtcgtcggagaa 499
>gb|AY261524.1| Populus alba x Populus tremula putative two-component system response regulator mRNA, partial cds Length = 226 Score = 65.9 bits (33), Expect = 2e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagg 274 |||||||| |||||||| || || |||||||||| |||||||| || || |||||| Sbjct: 6 atgcctggaatgacaggctatgagttgctcaagaaaatcaaggaatcatctagtttcaga 65 Query: 275 gacatcccggttgtgatcatgtcatcggagaac 307 || || ||||||||||| ||||||||||||||| Sbjct: 66 gaaataccggttgtgattatgtcatcggagaac 98
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| | |||||| || ||||| |||||||||||||||||| Sbjct: 15387966 atcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatcaag 15388025 Query: 257 g 257 | Sbjct: 15388026 g 15388026 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 cacaaacaacagcagcagcag 495 ||||||||||||||||||||| Sbjct: 29287827 cacaaacaacagcagcagcag 29287847
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| | |||||| || ||||| |||||||||||||||||| Sbjct: 94965 atcatcacggactactggatgccggagatgaccgggtacgacctgctcaagaagatcaag 95024 Query: 257 g 257 | Sbjct: 95025 g 95025
>ref|XM_468534.1| Oryza sativa (japonica cultivar-group), mRNA Length = 396 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| || ||||||||||| | ||||||||| | |||||| ||||||| | ||||| Sbjct: 175 atcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtcaag 234 Query: 257 gagtcg 262 |||||| Sbjct: 235 gagtcg 240
>emb|AJ938072.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 3 (rr3 gene) Length = 396 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| || ||||||||||| | ||||||||| | |||||| ||||||| | ||||| Sbjct: 175 atcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtcaag 234 Query: 257 gagtcg 262 |||||| Sbjct: 235 gagtcg 240
>dbj|AB249655.1| Oryza sativa (japonica cultivar-group) OsRR3 mRNA for typeA response regulator 3, complete cds Length = 396 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| || ||||||||||| | ||||||||| | |||||| ||||||| | ||||| Sbjct: 175 atcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtcaag 234 Query: 257 gagtcg 262 |||||| Sbjct: 235 gagtcg 240
>ref|XM_466223.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 gactactgcatgcctgggatgacaggatacgatctgctcaa 246 |||||||||||||| | |||||||||||||||||| ||||| Sbjct: 406 gactactgcatgccggagatgacaggatacgatcttctcaa 446
>ref|XM_506827.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0038F20.11 mRNA Length = 1666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 gactactgcatgcctgggatgacaggatacgatctgctcaa 246 |||||||||||||| | |||||||||||||||||| ||||| Sbjct: 434 gactactgcatgccggagatgacaggatacgatcttctcaa 474
>emb|AJ938071.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 2 (rr2 gene) Length = 759 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 gactactgcatgcctgggatgacaggatacgatctgctcaa 246 |||||||||||||| | |||||||||||||||||| ||||| Sbjct: 268 gactactgcatgccggagatgacaggatacgatcttctcaa 308
>dbj|AB249662.1| Oryza sativa (japonica cultivar-group) OsRR2 mRNA for typeA response regulator 2, complete cds Length = 759 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 gactactgcatgcctgggatgacaggatacgatctgctcaa 246 |||||||||||||| | |||||||||||||||||| ||||| Sbjct: 268 gactactgcatgccggagatgacaggatacgatcttctcaa 308
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 206 gactactgcatgcctgggatgacaggatacgatctgctcaa 246 |||||||||||||| | |||||||||||||||||| ||||| Sbjct: 21149862 gactactgcatgccggagatgacaggatacgatcttctcaa 21149822 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| || ||||||||||| | ||||||||| | |||||| ||||||| | ||||| Sbjct: 35708356 atcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtcaag 35708297 Query: 257 g 257 | Sbjct: 35708296 g 35708296
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20 Length = 129595 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 206 gactactgcatgcctgggatgacaggatacgatctgctcaa 246 |||||||||||||| | |||||||||||||||||| ||||| Sbjct: 56578 gactactgcatgccggagatgacaggatacgatcttctcaa 56538
>dbj|AK070645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L14, full insert sequence Length = 1666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 gactactgcatgcctgggatgacaggatacgatctgctcaa 246 |||||||||||||| | |||||||||||||||||| ||||| Sbjct: 434 gactactgcatgccggagatgacaggatacgatcttctcaa 474
>dbj|AK069453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020J18, full insert sequence Length = 1412 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 206 gactactgcatgcctgggatgacaggatacgatctgctcaa 246 |||||||||||||| | |||||||||||||||||| ||||| Sbjct: 406 gactactgcatgccggagatgacaggatacgatcttctcaa 446
>ref|NM_114679.3| Arabidopsis thaliana ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator AT3G48100 (ARR5) mRNA, complete cds Length = 1374 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagg 274 |||||||||||||| ||||| || || || ||||||||||| || || || ||||||| Sbjct: 402 atgcctgggatgactggatatgaactactgaagaagatcaaagaatcatcagctttcaga 461 Query: 275 gacatcccggttgtgatcatgtcatcggagaacat 309 || || || |||||||| ||||| || |||||||| Sbjct: 462 gaaataccagttgtgattatgtcttcagagaacat 496
>gb|AY114698.1| Arabidopsis thaliana response reactor 2 (ATRR2) (At3g48100) mRNA, complete cds Length = 634 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagg 274 |||||||||||||| ||||| || || || ||||||||||| || || || ||||||| Sbjct: 268 atgcctgggatgactggatatgaactactgaagaagatcaaagaatcatcagctttcaga 327 Query: 275 gacatcccggttgtgatcatgtcatcggagaacat 309 || || || |||||||| ||||| || |||||||| Sbjct: 328 gaaataccagttgtgattatgtcttcagagaacat 362
>gb|AY072390.1| Arabidopsis thaliana response reactor 2 (ATRR2) (At3g48100) mRNA, complete cds Length = 911 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagg 274 |||||||||||||| ||||| || || || ||||||||||| || || || ||||||| Sbjct: 337 atgcctgggatgactggatatgaactactgaagaagatcaaagaatcatcagctttcaga 396 Query: 275 gacatcccggttgtgatcatgtcatcggagaacat 309 || || || |||||||| ||||| || |||||||| Sbjct: 397 gaaataccagttgtgattatgtcttcagagaacat 431
>emb|BX824631.1|CNS0A6YD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1337 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagg 274 |||||||||||||| ||||| || || || ||||||||||| || || || ||||||| Sbjct: 359 atgcctgggatgactggatatgaactactgaagaagatcaaagaatcatcagctttcaga 418 Query: 275 gacatcccggttgtgatcatgtcatcggagaacat 309 || || || |||||||| ||||| || |||||||| Sbjct: 419 gaaataccagttgtgattatgtcttcagagaacat 453
>dbj|AB010916.1| Arabidopsis thaliana mRNA for responce reactor2, complete cds Length = 980 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagg 274 |||||||||||||| ||||| || || || ||||||||||| || || || ||||||| Sbjct: 402 atgcctgggatgactggatatgaactactgaagaagatcaaagaatcatcagctttcaga 461 Query: 275 gacatcccggttgtgatcatgtcatcggagaacat 309 || || || |||||||| ||||| || |||||||| Sbjct: 462 gaaataccagttgtgattatgtcttcagagaacat 496
>gb|AF057281.1|AF057281 Arabidopsis thaliana two-component response regulator homolog (IBC6) mRNA, complete cds Length = 1298 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagg 274 |||||||||||||| ||||| || || || ||||||||||| || || || ||||||| Sbjct: 325 atgcctgggatgactggatatgaactactgaagaagatcaaagaatcatcagctttcaga 384 Query: 275 gacatcccggttgtgatcatgtcatcggagaacat 309 || || || |||||||| ||||| || |||||||| Sbjct: 385 gaaataccagttgtgattatgtcttcagagaacat 419
>dbj|AB008488.1| Arabidopsis thaliana ARR5 mRNA for response regulator 5, complete cds Length = 891 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagg 274 |||||||||||||| ||||| || || || ||||||||||| || || || ||||||| Sbjct: 317 atgcctgggatgactggatatgaactactgaagaagatcaaagaatcatcagctttcaga 376 Query: 275 gacatcccggttgtgatcatgtcatcggagaacat 309 || || || |||||||| ||||| || |||||||| Sbjct: 377 gaaataccagttgtgattatgtcttcagagaacat 411
>ref|NM_104686.2| Arabidopsis thaliana ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator AT1G59940 (ARR3) mRNA, complete cds Length = 1051 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| |||||||| || || || ||||| ||| Sbjct: 349 atcatcactgattactgtatgcctggaatgactggatacgagcttctgaaaaagattaag 408 Query: 257 ga 258 || Sbjct: 409 ga 410
>emb|AJ938074.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 5 (rr5 gene) Length = 405 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Plus Query: 200 atcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaaggag 259 |||||||||||||| ||||| | |||||| || || || || || |||||| |||||||| Sbjct: 190 atcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtcaaggag 249 Query: 260 tcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacataccttccaga 319 ||||| | | ||| ||||| || ||||||||||| ||||||||| | || | || Sbjct: 250 tcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctctacaagg 309 Query: 320 attaacagatgcctggaggaaggagc 345 || ||||| ||| ||||||||||||| Sbjct: 310 atcaacaggtgcttggaggaaggagc 335
>dbj|AB249654.1| Oryza sativa (japonica cultivar-group) OsRR5 mRNA for typeA response regulator 5, complete cds Length = 405 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Plus Query: 200 atcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaaggag 259 |||||||||||||| ||||| | |||||| || || || || || |||||| |||||||| Sbjct: 190 atcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtcaaggag 249 Query: 260 tcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacataccttccaga 319 ||||| | | ||| ||||| || ||||||||||| ||||||||| | || | || Sbjct: 250 tcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctctacaagg 309 Query: 320 attaacagatgcctggaggaaggagc 345 || ||||| ||| ||||||||||||| Sbjct: 310 atcaacaggtgcttggaggaaggagc 335
>gb|BT024848.1| Arabidopsis thaliana At1g59940 gene, complete cds Length = 696 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| |||||||| || || || ||||| ||| Sbjct: 271 atcatcactgattactgtatgcctggaatgactggatacgagcttctgaaaaagattaag 330 Query: 257 ga 258 || Sbjct: 331 ga 332
>dbj|AK106426.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B09, full insert sequence Length = 839 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Plus Query: 200 atcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaaggag 259 |||||||||||||| ||||| | |||||| || || || || || |||||| |||||||| Sbjct: 265 atcactgactactggatgccggagatgaccgggtatgaactcctgaagaaggtcaaggag 324 Query: 260 tcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaacataccttccaga 319 ||||| | | ||| ||||| || ||||||||||| ||||||||| | || | || Sbjct: 325 tcgtccaggctgaaggagatccctgtggtgatcatgtcctcggagaacgtctctacaagg 384 Query: 320 attaacagatgcctggaggaaggagc 345 || ||||| ||| ||||||||||||| Sbjct: 385 atcaacaggtgcttggaggaaggagc 410
>dbj|AP006649.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320b, complete sequence Length = 32128 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 200 atcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaagg 257 ||||| ||||| |||||||| ||||||||||| || || || |||||||| ||||||| Sbjct: 17551 atcacagactattgcatgccagggatgacaggctatgagctactcaagaaaatcaagg 17608
>dbj|AP006630.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12F12, TM0028a, complete sequence Length = 60126 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 200 atcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaagg 257 |||||||| |||||||||||||| ||||| || || || |||||||||| ||||||| Sbjct: 29579 atcactgattactgcatgcctggaatgactggttatgaattgctcaagaaaatcaagg 29636 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 catgtcttggccgtggatgacagc 28 |||||||||||||| ||||||||| Sbjct: 29233 catgtcttggccgtcgatgacagc 29256
>dbj|AB008486.1| Arabidopsis thaliana ARR3 mRNA for response regulator 3, complete cds Length = 1028 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| |||||||| || || || ||||| ||| Sbjct: 326 atcatcactgattactgtatgcctggaatgactggatacgagcttctgaaaaagattaag 385 Query: 257 ga 258 || Sbjct: 386 ga 387
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete sequence Length = 144422 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacga 237 ||||||||||| ||||| |||||||| ||||| |||||||| Sbjct: 132320 atcatcactgattactgtatgcctggaatgactggatacga 132280
>ref|XM_794179.1| PREDICTED: Strongylocentrotus purpuratus similar to mSin3A-associated protein 130 (LOC594749), mRNA Length = 3561 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 468 ccaaccccacaaacaacagcagcagcaga 496 |||||||| |||||||||||||||||||| Sbjct: 228 ccaaccccccaaacaacagcagcagcaga 256
>gb|AC007067.4|AC007067 Genomic sequence for Arabidopsis thaliana BAC T10O24 from Chromosome 1, complete sequence Length = 89934 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 24397 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 24338 Query: 257 g 257 | Sbjct: 24337 g 24337
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| || ||||||||||| | ||||||||| | |||||| ||||||| | ||||| Sbjct: 68970 atcatcacggattactgcatgccggagatgacagggttcgatctcctcaagagggtcaag 68911 Query: 257 g 257 | Sbjct: 68910 g 68910
>gb|AF170550.1|AF170550 Arabidopsis thaliana germin-like protein 7 (GLP7) gene, complete cds Length = 5437 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 ||||||||||| ||||| |||||||| ||||| || || || || ||||||||||| ||| Sbjct: 114 atcatcactgattactgtatgcctggaatgactggttatgagcttctcaagaagattaag 173 Query: 257 g 257 | Sbjct: 174 g 174
>gb|AC152495.1| Zea mays BAC clone Z486N13, complete sequence Length = 169348 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Plus Query: 216 tgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcaggg 275 ||||||||||||| || ||||| ||||||||| ||||||||||| || | |||||| Sbjct: 92067 tgcctgggatgactgggtacgagctgctcaagcgcgtcaaggagtcggcggcgctcaggg 92126 Query: 276 acatcccggttgtgatcatgtcatcggagaac 307 |||||| || || |||||||| | ||||||| Sbjct: 92127 acatcctcgtcgtcatcatgtcgttggagaac 92158
>gb|AC152494.1| Zea mays BAC clone Z418K17, complete sequence Length = 195448 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 216 tgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcaggg 275 ||||||||||||| || ||||| ||||||||| ||||||||||| || | |||||| Sbjct: 181436 tgcctgggatgactgggtacgagctgctcaagcgcgtcaaggagtcggcggcgctcaggg 181377 Query: 276 acatcccggttgtgatcatgtcatcggagaac 307 |||||| || || |||||||| | ||||||| Sbjct: 181376 acatcctcgtcgtcatcatgtcgttggagaac 181345
>gb|AC136839.20| Medicago truncatula clone mth2-13n2, complete sequence Length = 121995 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 214 catgcctgggatgacaggatacgatctgctcaagaagatcaagg 257 ||||||||||||||||||||| || | |||||||| ||||||| Sbjct: 14278 catgcctgggatgacaggatatgaattactcaagaaaatcaagg 14235
>gb|AF466931.1| Zea mays clone BAC 163K15, complete sequence Length = 95078 Score = 48.1 bits (24), Expect = 0.036 Identities = 75/92 (81%) Strand = Plus / Minus Query: 216 tgcctgggatgacaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcaggg 275 ||||||||||||| || ||||| ||||||||| ||||||||||| || | |||||| Sbjct: 18418 tgcctgggatgactgggtacgagctgctcaagcgcgtcaaggagtcggcggcgctcaggg 18359 Query: 276 acatcccggttgtgatcatgtcatcggagaac 307 |||||| || || |||||||| | ||||||| Sbjct: 18358 acatcctcgtcgtcatcatgtcgttggagaac 18327
>ref|XM_474315.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 46.1 bits (23), Expect = 0.14 Identities = 89/111 (80%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| || ||||| || ||||| || |||||| ||||| Sbjct: 298 atcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtcaag 357 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 || ||||| ||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 358 gaatcgtctcagctcaaggagatcccggtggtgatcatgtcgtcggagaac 408
>emb|AJ938075.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 6 (rr6 gene) Length = 513 Score = 46.1 bits (23), Expect = 0.14 Identities = 89/111 (80%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| || ||||| || ||||| || |||||| ||||| Sbjct: 298 atcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtcaag 357 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 || ||||| ||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 358 gaatcgtctcagctcaaggagatcccggtggtgatcatgtcgtcggagaac 408
>dbj|AB249653.1| Oryza sativa (japonica cultivar-group) OsRR6 mRNA for typeA response regulator 6, complete cds Length = 513 Score = 46.1 bits (23), Expect = 0.14 Identities = 89/111 (80%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| || ||||| || ||||| || |||||| ||||| Sbjct: 298 atcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtcaag 357 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 || ||||| ||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 358 gaatcgtctcagctcaaggagatcccggtggtgatcatgtcgtcggagaac 408
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 200 atcactgactactgcatgcctgggatgacag 230 ||||||||||||| ||||||||| ||||||| Sbjct: 24696235 atcactgactactacatgcctggcatgacag 24696205 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 278 atcccggttgtgatcatgtcatcggagaac 307 |||||||| ||||||||||| ||||||||| Sbjct: 34411697 atcccggtggtgatcatgtcgtcggagaac 34411726 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 201 tcactgactactgcatgcctgggatgac 228 |||| |||||||||||||||| |||||| Sbjct: 22034331 tcaccgactactgcatgcctgagatgac 22034304
>dbj|AK109703.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F10, full insert sequence Length = 1968 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 200 atcactgactactgcatgcctgggatgacag 230 ||||||||||||| ||||||||| ||||||| Sbjct: 584 atcactgactactacatgcctggcatgacag 614
>dbj|AK059734.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B01, full insert sequence Length = 1011 Score = 46.1 bits (23), Expect = 0.14 Identities = 89/111 (80%) Strand = Plus / Plus Query: 197 atcatcactgactactgcatgcctgggatgacaggatacgatctgctcaagaagatcaag 256 |||||||| |||||||| ||||| || ||||| || ||||| || |||||| ||||| Sbjct: 400 atcatcaccgactactggatgcccggcatgaccggctacgagctcctcaagcgcgtcaag 459 Query: 257 gagtcgtcgtctttcagggacatcccggttgtgatcatgtcatcggagaac 307 || ||||| ||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 460 gaatcgtctcagctcaaggagatcccggtggtgatcatgtcgtcggagaac 510
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 200 atcactgactactgcatgcctgggatgacag 230 ||||||||||||| ||||||||| ||||||| Sbjct: 85758 atcactgactactacatgcctggcatgacag 85728
>dbj|AB042269.1| Zea mays ZmRR7 mRNA for response regulator 7, complete cds Length = 1058 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tcactgactactgcatgcctgggatgacaggatacgatctgctcaag 247 |||| |||||||||||||| | |||||| || ||||| ||||||||| Sbjct: 455 tcacggactactgcatgccggagatgactggctacgacctgctcaag 501
>gb|AC102469.7| Mus musculus chromosome 1, clone RP24-356O3, complete sequence Length = 173767 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 474 ccacaaacaacagcagcagcag 495 |||||||||||||||||||||| Sbjct: 71410 ccacaaacaacagcagcagcag 71389
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17, complete sequence Length = 159894 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 278 atcccggttgtgatcatgtcatcggagaac 307 |||||||| ||||||||||| ||||||||| Sbjct: 134771 atcccggtggtgatcatgtcgtcggagaac 134800
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 278 atcccggttgtgatcatgtcatcggagaac 307 |||||||| ||||||||||| ||||||||| Sbjct: 29182 atcccggtggtgatcatgtcgtcggagaac 29211
>gb|AC106734.3| Homo sapiens chromosome 16 clone CTD-2336H13, complete sequence Length = 109765 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 483 acagcagcagcagagataccat 504 |||||||||||||||||||||| Sbjct: 44849 acagcagcagcagagataccat 44828
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 278 atcccggttgtgatcatgtcatcggagaac 307 |||||||| ||||||||||| ||||||||| Sbjct: 32975 atcccggtggtgatcatgtcgtcggagaac 33004
>emb|AL732355.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0322F07, complete sequence Length = 100419 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 278 atcccggttgtgatcatgtcatcggagaac 307 |||||||| ||||||||||| ||||||||| Sbjct: 100013 atcccggtggtgatcatgtcgtcggagaac 100042
>ref|NM_115496.1| Arabidopsis thaliana ARR17; transcription regulator/ two-component response regulator AT3G56380 (ARR17) mRNA, complete cds Length = 462 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 183 tgaacgtgaacctcatcatcactgactactgcatgcctgggatgacagg 231 |||| ||||| |||||||||||||| || || ||||| || |||||||| Sbjct: 221 tgaaggtgaatctcatcatcactgattattgtatgccaggaatgacagg 269
>ref|NM_106147.1| Arabidopsis thaliana ARR15 (RESPONSE REGULATOR 15); transcription regulator AT1G74890 (ARR15) mRNA, complete cds Length = 621 Score = 42.1 bits (21), Expect = 2.2 Identities = 69/85 (81%) Strand = Plus / Plus Query: 227 acaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagggacatcccggtt 286 |||||||| || || |||||||||||||| ||||| || | |||| || ||||| || Sbjct: 256 acaggatatgaactcctcaagaagatcaaagagtcttcagcactcagagaaatcccagta 315 Query: 287 gtgatcatgtcatcggagaacatac 311 ||||| ||||| || |||||||||| Sbjct: 316 gtgataatgtcttctgagaacatac 340
>gb|BT011527.1| Drosophila melanogaster RE32262 full insert cDNA Length = 3390 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 279 ccacaaacaacagcagcagca 299
>emb|CR847826.13| Zebrafish DNA sequence from clone CH211-204D2 in linkage group 8, complete sequence Length = 150519 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 478 aaacaacagcagcagcagaga 498 ||||||||||||||||||||| Sbjct: 92443 aaacaacagcagcagcagaga 92463
>emb|AL358854.10| Human DNA sequence from clone RP11-424D14 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 85108 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 tgactactgcatgcctgggat 225 ||||||||||||||||||||| Sbjct: 42559 tgactactgcatgcctgggat 42579
>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19 Length = 101539 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 183 tgaacgtgaacctcatcatcactgactactgcatgcctgggatgacagg 231 |||| ||||| |||||||||||||| || || ||||| || |||||||| Sbjct: 16696 tgaaggtgaatctcatcatcactgattattgtatgccaggaatgacagg 16744
>emb|AL049658.1|ATT17F15 Arabidopsis thaliana DNA chromosome 3, BAC clone T17F15 Length = 107950 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 215 atgcctgggatgacaggatacgatctgctcaagaagatcaa 255 |||||||||||||| ||||| || || || ||||||||||| Sbjct: 14198 atgcctgggatgactggatatgaactactgaagaagatcaa 14238
>emb|CR759748.6| Zebrafish DNA sequence from clone DKEYP-118G11 in linkage group 17, complete sequence Length = 165743 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 caaccccacaaacaacagcag 489 ||||||||||||||||||||| Sbjct: 62977 caaccccacaaacaacagcag 62997
>gb|AY643479.1| Edwardsiella tarda strain PPD130/91 putative membrane protein gene, partial cds Length = 421 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 cacaaacaacagcagcagcag 495 ||||||||||||||||||||| Sbjct: 246 cacaaacaacagcagcagcag 226
>gb|AC162903.3| Mus musculus BAC clone RP24-68D13 from chromosome 9, complete sequence Length = 198549 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tcactgactactgcatgcctg 221 ||||||||||||||||||||| Sbjct: 10972 tcactgactactgcatgcctg 10992
>gb|AC010023.6| Drosophila melanogaster 3L BAC RP98-19G23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161175 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 5745 ccacaaacaacagcagcagca 5725
>gb|AC096692.5| Drosophila melanogaster 3L BAC RP98-48O3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173782 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 23174 ccacaaacaacagcagcagca 23194
>ref|NM_168446.1| Drosophila melanogaster Mnf CG11799-RD, transcript variant D (Mnf), mRNA Length = 3195 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 243 ccacaaacaacagcagcagca 263
>ref|NM_168445.1| Drosophila melanogaster Mnf CG11799-RC, transcript variant C (Mnf), mRNA Length = 3117 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 165 ccacaaacaacagcagcagca 185
>ref|NM_168444.1| Drosophila melanogaster Mnf CG11799-RB, transcript variant B (Mnf), mRNA Length = 3320 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 368 ccacaaacaacagcagcagca 388
>ref|NM_168443.1| Drosophila melanogaster Mnf CG11799-RA, transcript variant A (Mnf), mRNA Length = 3231 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 279 ccacaaacaacagcagcagca 299
>ref|NM_140183.1| Drosophila melanogaster Mnf CG11799-RE, transcript variant E (Mnf), mRNA Length = 3108 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 279 ccacaaacaacagcagcagca 299
>gb|AC161370.3| Mus musculus BAC clone RP23-437J23 from chromosome 9, complete sequence Length = 187354 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tcactgactactgcatgcctg 221 ||||||||||||||||||||| Sbjct: 168199 tcactgactactgcatgcctg 168219
>gb|BT023507.1| Drosophila melanogaster LD11294 full insert cDNA Length = 3235 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 223 ccacaaacaacagcagcagca 243
>gb|AF305722.1|AF305722 Arabidopsis thaliana ecotype Columbia response regulator 17 mRNA, complete cds Length = 462 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 183 tgaacgtgaacctcatcatcactgactactgcatgcctgggatgacagg 231 |||| ||||| |||||||||||||| || || ||||| || |||||||| Sbjct: 221 tgaaggtgaatctcatcatcactgattattgtatgccaggaatgacagg 269
>gb|AF305720.1|AF305720 Arabidopsis thaliana ecotype Columbia response regulator 15 mRNA, complete cds Length = 621 Score = 42.1 bits (21), Expect = 2.2 Identities = 69/85 (81%) Strand = Plus / Plus Query: 227 acaggatacgatctgctcaagaagatcaaggagtcgtcgtctttcagggacatcccggtt 286 |||||||| || || |||||||||||||| ||||| || | |||| || ||||| || Sbjct: 256 acaggatatgaactcctcaagaagatcaaagagtcttcagcactcagagaaatcccagta 315 Query: 287 gtgatcatgtcatcggagaacatac 311 ||||| ||||| || |||||||||| Sbjct: 316 gtgataatgtcttctgagaacatac 340
>dbj|AB076907.1| Arabidopsis thaliana IRK gene for inflorescence and root apices receptor-like kinase, complete cds Length = 9259 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 183 tgaacgtgaacctcatcatcactgactactgcatgcctgggatgacagg 231 |||| ||||| |||||||||||||| || || ||||| || |||||||| Sbjct: 2212 tgaaggtgaatctcatcatcactgattattgtatgccaggaatgacagg 2164
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 cacaaacaacagcagcagcag 495 ||||||||||||||||||||| Sbjct: 76516 cacaaacaacagcagcagcag 76536
>gb|AC006562.8|AC006562 Drosophila melanogaster, chromosome 3L, region 68A1-68B2, BAC clone BACR48O03, complete sequence Length = 173781 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 150608 ccacaaacaacagcagcagca 150588
>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete sequence Length = 281589 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 ccacaaacaacagcagcagca 494 ||||||||||||||||||||| Sbjct: 229813 ccacaaacaacagcagcagca 229793
>gb|AC159245.2| Mus musculus BAC clone RP24-260B5 from chromosome 12, complete sequence Length = 168773 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 160810 acaaacaacagcagcagcag 160791
>gb|AC167814.4| Mus musculus BAC clone RP24-248O12 from chromosome 17, complete sequence Length = 177174 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cacaaacaacagcagcagca 494 |||||||||||||||||||| Sbjct: 163931 cacaaacaacagcagcagca 163912
>ref|XM_470617.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1767 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 ccatggatcacagcagcagc 586 |||||||||||||||||||| Sbjct: 1371 ccatggatcacagcagcagc 1390
>ref|XM_472626.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 327 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 tcactgactactgcatgcctgggatgac 228 |||| |||||||||||||||| |||||| Sbjct: 197 tcaccgactactgcatgcctgagatgac 224
>gb|AC102757.6| Mus musculus chromosome 5, clone RP24-196M24, complete sequence Length = 179876 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 accatcaccattagcagcag 519 |||||||||||||||||||| Sbjct: 39477 accatcaccattagcagcag 39496
>gb|AC163679.3| Mus musculus BAC clone RP24-104E24 from chromosome 16, complete sequence Length = 193718 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 21895 acaaacaacagcagcagcag 21914
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 ccatggatcacagcagcagc 586 |||||||||||||||||||| Sbjct: 6963272 ccatggatcacagcagcagc 6963253
>ref|XM_389448.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09272.1) partial mRNA Length = 1458 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 aagcaacagcgataccaaccccac 477 |||||| ||||||||||||||||| Sbjct: 936 aagcaagagcgataccaaccccac 959
>gb|AC127676.4| Mus musculus BAC clone RP24-560M21 from chromosome 5, complete sequence Length = 146575 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 143460 acaaacaacagcagcagcag 143441
>ref|XM_807279.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505193.90) partial mRNA Length = 1350 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aacaacagcagcagcagaga 498 |||||||||||||||||||| Sbjct: 1304 aacaacagcagcagcagaga 1323
>ref|XM_812823.1| Trypanosoma cruzi strain CL Brener Golgi/lysosome glycoprotein (Tc00.1047053511391.180) partial mRNA Length = 1848 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 atgacagcgtccttgacagg 40 |||||||||||||||||||| Sbjct: 1832 atgacagcgtccttgacagg 1813
>gb|AC105404.4| Mus musculus BAC clone RP24-112M13 from chromosome 16, complete sequence Length = 127531 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 125967 acaaacaacagcagcagcag 125986
>gb|AC121777.3| Mus musculus BAC clone RP23-359A23 from chromosome 16, complete sequence Length = 192846 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 185572 acaaacaacagcagcagcag 185553
>emb|AJ938070.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 1 (rr1 gene) Length = 696 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 tcactgactactgcatgcctgggatgac 228 |||| |||||||||||||||| |||||| Sbjct: 197 tcaccgactactgcatgcctgagatgac 224
>gb|AC122196.2| Mus musculus BAC clone RP23-50P5 from 5, complete sequence Length = 151406 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 accatcaccattagcagcag 519 |||||||||||||||||||| Sbjct: 130476 accatcaccattagcagcag 130495
>gb|AC114575.8| Mus musculus chromosome 12, clone RP23-152I9, complete sequence Length = 193164 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 178120 acaaacaacagcagcagcag 178139
>gb|AC101969.6| Mus musculus chromosome 17, clone RP24-259G8, complete sequence Length = 219711 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 cacaaacaacagcagcagca 494 |||||||||||||||||||| Sbjct: 107174 cacaaacaacagcagcagca 107193
>emb|AL158011.13| Human DNA sequence from clone GS1-215N23 on chromosome 1q24.1-31.1 Contains the 3' end of the C1orf19 gene for chromosome 1 open reading frame 19, complete sequence Length = 169048 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 accatcaccattagcagcag 519 |||||||||||||||||||| Sbjct: 29815 accatcaccattagcagcag 29796
>gb|AC093548.4| Drosophila melanogaster 3L BAC RP98-15B4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171697 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 accatcagcagcagtaaccc 609 |||||||||||||||||||| Sbjct: 130506 accatcagcagcagtaaccc 130525
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 500 accatcaccattagcagcagtaac 523 ||||||||||||||| |||||||| Sbjct: 2779676 accatcaccattagcggcagtaac 2779653
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 201 tcactgactactgcatgcctgggatgac 228 |||| |||||||||||||||| |||||| Sbjct: 100253 tcaccgactactgcatgcctgagatgac 100226
>emb|AJ272390.1|DME272390 Drosophila melanogaster partial sbr gene for tip associating protein, exons 4-6 Length = 1768 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ttaacagatgcctggaggaa 340 |||||||||||||||||||| Sbjct: 1427 ttaacagatgcctggaggaa 1446
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 93202 acaaacaacagcagcagcag 93183
>emb|CR318652.16| Zebrafish DNA sequence from clone CH211-128O18 in linkage group 11, complete sequence Length = 179522 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 143801 acaaacaacagcagcagcag 143782
>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence Length = 194718 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 34060 acaaacaacagcagcagcag 34041
>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172175 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 aacaacagcagcagcagaga 498 |||||||||||||||||||| Sbjct: 126289 aacaacagcagcagcagaga 126270
>dbj|AB249661.1| Oryza sativa (japonica cultivar-group) OsRR1 mRNA for typeA response regulator 1, complete cds Length = 696 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 tcactgactactgcatgcctgggatgac 228 |||| |||||||||||||||| |||||| Sbjct: 197 tcaccgactactgcatgcctgagatgac 224
>gb|AY119525.1| Drosophila melanogaster GH15728 full insert cDNA Length = 6500 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aacaacagcagcagcagaga 498 |||||||||||||||||||| Sbjct: 1289 aacaacagcagcagcagaga 1308
>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166862 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aacaacagcagcagcagaga 498 |||||||||||||||||||| Sbjct: 68465 aacaacagcagcagcagaga 68484
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ttaacagatgcctggaggaa 340 |||||||||||||||||||| Sbjct: 6094 ttaacagatgcctggaggaa 6075
>gb|AC010012.5| Drosophila melanogaster 3L BAC RP98-22J16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170466 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 accatcagcagcagtaaccc 609 |||||||||||||||||||| Sbjct: 154312 accatcagcagcagtaaccc 154293
>gb|AC010006.8| Drosophila melanogaster 3L BAC RP98-20A11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169735 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 590 accatcagcagcagtaaccc 609 |||||||||||||||||||| Sbjct: 149575 accatcagcagcagtaaccc 149594
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 ccatggatcacagcagcagc 586 |||||||||||||||||||| Sbjct: 119093 ccatggatcacagcagcagc 119112
>ref|NM_142834.2| Drosophila melanogaster CG6985-RA (CG6985), mRNA Length = 1684 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 atctgctcaagaagatcaag 256 |||||||||||||||||||| Sbjct: 599 atctgctcaagaagatcaag 618
>ref|NM_139371.1| Drosophila melanogaster CG13917-RA (CG13917), mRNA Length = 6482 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aacaacagcagcagcagaga 498 |||||||||||||||||||| Sbjct: 1289 aacaacagcagcagcagaga 1308
>gb|AY069445.1| Drosophila melanogaster LD15939 full length cDNA Length = 1695 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 atctgctcaagaagatcaag 256 |||||||||||||||||||| Sbjct: 599 atctgctcaagaagatcaag 618
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ggacgtcgaggtgaacgtga 191 |||||||||||||||||||| Sbjct: 2583171 ggacgtcgaggtgaacgtga 2583190
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 acctcatcatcactgactactgcatgcc 219 ||||||||||||| |||||| ||||||| Sbjct: 2744010 acctcatcatcaccgactaccgcatgcc 2744037
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 ccatggatcacagcagcagc 586 |||||||||||||||||||| Sbjct: 6961167 ccatggatcacagcagcagc 6961148
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 cacaaacaacagcagcagca 494 |||||||||||||||||||| Sbjct: 20537 cacaaacaacagcagcagca 20556
>gb|AC009846.9|AC009846 Drosophila melanogaster, chromosome 3R, region 94C-94D, BAC clone BACR23F10, complete sequence Length = 164038 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 atctgctcaagaagatcaag 256 |||||||||||||||||||| Sbjct: 109313 atctgctcaagaagatcaag 109332
>gb|AC080166.6| Homo sapiens BAC clone RP11-813C7 from 2, complete sequence Length = 179961 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 aaacaacagcagcagcagag 497 |||||||||||||||||||| Sbjct: 164961 aaacaacagcagcagcagag 164980
>gb|AC154376.3| Mus musculus BAC clone RP23-71H16 from chromosome 13, complete sequence Length = 169417 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gatgcctggaggaaggagca 346 |||||||||||||||||||| Sbjct: 90051 gatgcctggaggaaggagca 90070
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 567 ccatggatcacagcagcagc 586 |||||||||||||||||||| Sbjct: 129869 ccatggatcacagcagcagc 129850
>gb|AF238868.1|AF238868 Homo sapiens clone GLSH-1 similar to gliadin gene sequence Length = 2704 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 2062 acaaacaacagcagcagcag 2081
>gb|U32503.1|AQU32503 Anopheles quadrimaculatus B 5.8S ribosomal RNA and 28S ribosomal RNA genes, partial sequence, and internal transcribed spacer 2, complete sequence Length = 463 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 acagcagcagcagagatacc 502 |||||||||||||||||||| Sbjct: 375 acagcagcagcagagatacc 394
>gb|AC122769.11| Mus musculus chromosome 15, clone RP24-153A12, complete sequence Length = 150945 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 accttccagaattaacagat 329 |||||||||||||||||||| Sbjct: 77684 accttccagaattaacagat 77665
>dbj|BS000123.1| Pan troglodytes chromosome 22 clone:PTB-109N23, map 22, complete sequences Length = 216200 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 122208 acaaacaacagcagcagcag 122227
>gb|AC125292.4| Drosophila melanogaster X BAC CH223-5O10 (Children's Hospital Oakland Research Institute Drosophila melanogaster sheared DNA BAC Library) complete sequence Length = 95026 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ttaacagatgcctggaggaa 340 |||||||||||||||||||| Sbjct: 60735 ttaacagatgcctggaggaa 60716
>dbj|AK106306.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C10, full insert sequence Length = 2510 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 ccatggatcacagcagcagc 586 |||||||||||||||||||| Sbjct: 1714 ccatggatcacagcagcagc 1733
>dbj|AK105815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C10, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 tcactgactactgcatgcctgggatgac 228 |||| |||||||||||||||| |||||| Sbjct: 363 tcaccgactactgcatgcctgagatgac 390
>dbj|AK072736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139D11, full insert sequence Length = 1808 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 tcactgactactgcatgcctgggatgac 228 |||| |||||||||||||||| |||||| Sbjct: 561 tcaccgactactgcatgcctgagatgac 588
>gb|AF466202.2| Zea mays putative pol protein gene, partial cds; and putative gag-pol precursor -orf2, putative Fourf gag/pol protein, putative NADP-dependent malic enzyme, putative argonaute protein, putative pinhead protein, putative pol protein, putative gag protein, putative TNP2, r1-B73 proteins, putative genetic modifier, putative S-receptor kinase, putative aldose reductase-related protein, putative glutathione peroxidase, putative glycerol 3-phosphate permease, putative response regulator, and putative 4-coumarate-CoA ligase-like protein genes, complete cds Length = 290350 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 216 tgcctgggatgacaggatacgatctgctcaag 247 ||||||||||||| || ||||| ||||||||| Sbjct: 278002 tgcctgggatgactgggtacgagctgctcaag 277971
>emb|BX548023.3| Zebrafish DNA sequence from clone DKEY-265O13 in linkage group 18, complete sequence Length = 151449 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 65189 acaaacaacagcagcagcag 65170
>gb|AE003740.3| Drosophila melanogaster chromosome 3R, section 78 of 118 of the complete sequence Length = 234378 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 atctgctcaagaagatcaag 256 |||||||||||||||||||| Sbjct: 95964 atctgctcaagaagatcaag 95983
>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete sequence Length = 314111 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ttaacagatgcctggaggaa 340 |||||||||||||||||||| Sbjct: 61145 ttaacagatgcctggaggaa 61126
>gb|AE003474.4| Drosophila melanogaster chromosome 3L, section 8 of 83 of the complete sequence Length = 312072 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 590 accatcagcagcagtaaccc 609 |||||||||||||||||||| Sbjct: 212384 accatcagcagcagtaaccc 212365
>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete sequence Length = 303191 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aacaacagcagcagcagaga 498 |||||||||||||||||||| Sbjct: 59852 aacaacagcagcagcagaga 59871
>gb|BC084816.1| Xenopus laevis hypothetical LOC495352, mRNA (cDNA clone MGC:85259 IMAGE:6873633), complete cds Length = 1628 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aacaacagcagcagcagaga 498 |||||||||||||||||||| Sbjct: 133 aacaacagcagcagcagaga 152
>gb|AC174458.2| Mus musculus BAC clone RP23-282D14 from chromosome 13, complete sequence Length = 205673 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gatgcctggaggaaggagca 346 |||||||||||||||||||| Sbjct: 157372 gatgcctggaggaaggagca 157353
>gb|AC115633.4| Mus musculus BAC clone RP24-361I15 from 16, complete sequence Length = 135437 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 130623 acaaacaacagcagcagcag 130642
>gb|AC140429.2| Mus musculus BAC clone RP23-105O12 from 5, complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 202177 acaaacaacagcagcagcag 202196
>emb|CT027993.6| Mouse DNA sequence from clone RP24-82E21 on chromosome 17, complete sequence Length = 241014 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 cacaaacaacagcagcagca 494 |||||||||||||||||||| Sbjct: 207109 cacaaacaacagcagcagca 207128
>dbj|AP004495.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08B24, TM0027, complete sequence Length = 87135 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 5 catgtcttggccgtggatgacagcgtccttgacaggaagctcatcgagaggctcct 60 ||||| ||||| ||||| ||||| ||| |||| |||||||| | ||||||||||| Sbjct: 43646 catgtattggcagtggacgacagtgtcattgataggaagcttttggagaggctcct 43591
>gb|AC163446.2| Mus musculus chromosome 5, clone RP23-151G22, complete sequence Length = 190466 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cacaaacaacagcagcagca 494 |||||||||||||||||||| Sbjct: 44536 cacaaacaacagcagcagca 44517
>gb|AC171209.1| Mus musculus BAC clone RP23-105E1 from chromosome 17, complete sequence Length = 212184 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 cacaaacaacagcagcagca 494 |||||||||||||||||||| Sbjct: 144628 cacaaacaacagcagcagca 144647
>emb|AL929497.7| Mouse DNA sequence from clone RP23-341F15 on chromosome 4, complete sequence Length = 38346 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 474 ccacaaacaacagcagcagcagag 497 ||||||| |||||||||||||||| Sbjct: 23133 ccacaaagaacagcagcagcagag 23156
>gb|AC106843.11| Mus musculus chromosome 15, clone RP24-151M4, complete sequence Length = 179117 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 618 acagcagcggtgatagcagcaaca 641 ||||||||||||||||||| |||| Sbjct: 39345 acagcagcggtgatagcaggaaca 39368
>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete sequence Length = 210185 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 acaaacaacagcagcagcag 495 |||||||||||||||||||| Sbjct: 106174 acaaacaacagcagcagcag 106155
>emb|AL845161.5| Mouse DNA sequence from clone RP23-214I20 on chromosome 2, complete sequence Length = 233212 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 aacaacagcagcagcagaga 498 |||||||||||||||||||| Sbjct: 122997 aacaacagcagcagcagaga 122978
>emb|AL672224.15| Mouse DNA sequence from clone RP23-360E14 on chromosome X, complete sequence Length = 162162 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 ctccagttcttggggctcca 129 |||||||||||||||||||| Sbjct: 30223 ctccagttcttggggctcca 30242 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,156,259 Number of Sequences: 3902068 Number of extensions: 6156259 Number of successful extensions: 150637 Number of sequences better than 10.0: 184 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 149478 Number of HSP's gapped (non-prelim): 1146 length of query: 641 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 618 effective length of database: 17,143,297,704 effective search space: 10594557981072 effective search space used: 10594557981072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
