ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39o17 |
|---|---|
| Clone Library Name | barley_pub |
>Y194_SYNY3 (P54086) Hypothetical protein sll0194| Length = 254 Score = 85.5 bits (210), Expect = 1e-16 Identities = 40/73 (54%), Positives = 55/73 (75%) Frame = +2 Query: 380 LPDDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLS 559 +PDD EMS+FDHL+ELR RIF+S+ AV ++ CF F K +++ L+ P V+FLQLS Sbjct: 21 VPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQLS 78 Query: 560 PGEFFFTTLKVSG 598 PGEFFF ++KV+G Sbjct: 79 PGEFFFVSVKVAG 91
>YCF43_GRATL (Q6B8S9) Hypothetical tatC-like protein ycf43| Length = 238 Score = 68.6 bits (166), Expect = 1e-11 Identities = 35/67 (52%), Positives = 47/67 (70%) Frame = +2 Query: 395 EMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFF 574 EMSIF+HLEELR RIFI+ L CF + K+I IL+ P G++FLQL+PGE+ Sbjct: 10 EMSIFEHLEELRQRIFIAALIFIVITAICFTYMKNISYILQQPAI--GIKFLQLAPGEYL 67 Query: 575 FTTLKVS 595 FT++KV+ Sbjct: 68 FTSIKVA 74
>YCF43_GUITH (O78493) Hypothetical tatC-like protein ycf43| Length = 290 Score = 66.6 bits (161), Expect = 5e-11 Identities = 31/69 (44%), Positives = 47/69 (68%) Frame = +2 Query: 389 DKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGE 568 + EMS+ +HLEE+R R F S + II C F K+I+K L+ P + G++FLQ +PGE Sbjct: 54 EAEMSLAEHLEEIRQRAFWSFSVLTTMIISCIIFVKNIVKTLQEPAA--GIKFLQFAPGE 111 Query: 569 FFFTTLKVS 595 +FF ++KV+ Sbjct: 112 YFFASIKVA 120
>YCF43_CYACA (Q9TLS5) Hypothetical 27.3 kDa protein ycf43| Length = 239 Score = 62.8 bits (151), Expect = 7e-10 Identities = 30/70 (42%), Positives = 50/70 (71%) Frame = +2 Query: 386 DDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPG 565 D +MSI++HLEELR R S++A+ S++ C +I++++ P G++FLQLSPG Sbjct: 8 DSFQMSIYEHLEELRQRSIESIVALLISMVVCSLNINILIELIKQPAI--GIKFLQLSPG 65 Query: 566 EFFFTTLKVS 595 E+FFT++K++ Sbjct: 66 EYFFTSIKIT 75
>YCF43_PORPU (P51264) Hypothetical tatC-like protein ycf43| Length = 254 Score = 60.5 bits (145), Expect = 4e-09 Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 2/90 (2%) Frame = +2 Query: 332 EDQSSLYNFLYPSKELLPD-DKEMSIFDHLEELRAR-IFISVLAVGASIIGCFAFSKDII 505 E Q++L + + E LP+ D MSI +HLEELR R +F+ + + A+ I F K I+ Sbjct: 4 EPQNNLLANINTNSENLPENDVPMSITEHLEELRQRTVFVFIFFLLAATIS-FTQIKIIV 62 Query: 506 KILEAPVSVQGVRFLQLSPGEFFFTTLKVS 595 +I +AP G++FLQL+PGE+FF+++K++ Sbjct: 63 EIFQAPAI--GIKFLQLAPGEYFFSSIKIA 90
>YCF43_ODOSI (P49538) Hypothetical tatC-like protein ycf43| Length = 263 Score = 48.9 bits (115), Expect = 1e-05 Identities = 26/67 (38%), Positives = 41/67 (61%) Frame = +2 Query: 395 EMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFF 574 E+ +H+EEL+ R+F + + K ++KILE PV+ V+F QLSPGE+F Sbjct: 35 ELPFSEHIEELKQRLFHTFWIILILTFISLCEVKLLVKILELPVN--NVKFFQLSPGEYF 92 Query: 575 FTTLKVS 595 +T+K+S Sbjct: 93 VSTVKIS 99
>Y1267_AQUAE (O67305) Hypothetical protein aq_1267| Length = 240 Score = 43.5 bits (101), Expect = 5e-04 Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Frame = +2 Query: 398 MSIFDHLEELRARIFISVLA--VGASIIGCFAFSKDIIKILEAPV--SVQGVRFLQLSPG 565 M + +HL ELR R+ IS++A +G+ I F F+K + +IL+ P+ S V + LSP Sbjct: 1 MPLTEHLRELRYRLIISIIAFLIGSGI--AFYFAKYVFEILKEPILKSYPEVELITLSPT 58 Query: 566 EFFFTTLKVS 595 E F +K+S Sbjct: 59 EPLFILIKIS 68
>TATC_HELPJ (Q9ZM59) Sec-independent protein translocase protein tatC homolog| Length = 249 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/61 (37%), Positives = 37/61 (60%) Frame = +2 Query: 413 HLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFFFTTLKV 592 HL+ELR R+ +SV + + +GCF F K+I + ++ S +G +QLSP E +K+ Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKNIFEFVKN--SYKGT-LIQLSPIEGVMVAVKI 64 Query: 593 S 595 S Sbjct: 65 S 65
>TATC_HELPY (O25701) Sec-independent protein translocase protein tatC homolog| Length = 253 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/61 (37%), Positives = 36/61 (59%) Frame = +2 Query: 413 HLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFFFTTLKV 592 HL+ELR R+ +SV + + +GCF F K I + ++ S +G +QLSP E +K+ Sbjct: 8 HLQELRKRLMVSVGTILVAFLGCFHFWKSIFEFVKN--SYKGT-LIQLSPIEGVMVAVKI 64 Query: 593 S 595 S Sbjct: 65 S 65
>TATC_CAMJE (Q9PHT8) Sec-independent protein translocase protein tatC homolog| Length = 245 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 6/67 (8%) Frame = +2 Query: 413 HLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPV------SVQGVRFLQLSPGEFF 574 HL ELR R+FISV + I CFA I+ IL+AP+ + V +++ E Sbjct: 8 HLIELRKRLFISVACIVVMFIVCFALRSYILDILKAPLIAVLPEVAKHVNVIEVQ--EAL 65 Query: 575 FTTLKVS 595 FT +KVS Sbjct: 66 FTAMKVS 72
>TATCD_BACSU (P42252) Sec-independent protein translocase protein tatCd| Length = 245 Score = 37.7 bits (86), Expect = 0.026 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Frame = +2 Query: 386 DDKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDI----IKILEAPVSVQGVRFLQ 553 D KE + HLEELR RI +++ A +I F F +DI I+ L+ ++V Sbjct: 2 DKKETHLIGHLEELRRRIIVTLAAFFLFLITAFLFVQDIYDWLIRDLDGKLAV------- 54 Query: 554 LSPGEFFFTTLKVSG 598 L P E + + +SG Sbjct: 55 LGPSEILWVYMMLSG 69
>TATC_AZOCH (P54085) Sec-independent protein translocase protein tatC homolog| Length = 255 Score = 37.0 bits (84), Expect = 0.044 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +2 Query: 383 PD-DKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPV 526 PD D++M + HL ELR+R+ SV AV F F++DI ++ AP+ Sbjct: 5 PDSDQDMPLVAHLTELRSRLLRSVAAVLLIFAALFYFAQDIYALVSAPL 53
>LMO6_HUMAN (O43900) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 615 Score = 35.0 bits (79), Expect = 0.17 Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Frame = +2 Query: 35 PRETMGSAGALLSRP--PPQLGSILLRRHHISLPHLSSCTPEPLHCRRRHLRCSAVEGSS 208 PR T+ + A RP PP R HH + H + P RRRH +C A GS Sbjct: 486 PRRTLSAPPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPS----RRRHYQCDAGSGSD 541 Query: 209 GQDTNLPASQREESPSSSLGATLQD 283 + + SPSSS + +D Sbjct: 542 SESCS-------SSPSSSSSESSED 559
>Y887_METTH (O26973) Hypothetical UPF0104 protein MTH887| Length = 351 Score = 33.5 bits (75), Expect = 0.48 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +2 Query: 392 KEMSIFDHLEELRARIFISVLAVGASI--IGCFAFSKDIIKILE 517 +E S+FD++ E R I +S LAV I IG FA DI++ LE Sbjct: 5 EESSVFDYIRENRRTIVLSFLAVAVVIFLIGFFAGFGDILRALE 48
>TATC_HAEIN (P44560) Sec-independent protein translocase protein tatC| Length = 256 Score = 33.1 bits (74), Expect = 0.63 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Frame = +2 Query: 389 DKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPVSV---QGVRFLQLS 559 D+ + HL ELR R+ V+ V + FS DI + AP++ +G + + Sbjct: 5 DESQPLITHLVELRNRLLRCVICVVLVFVALVYFSNDIYHFVAAPLTAVMPKGATMIATN 64 Query: 560 PGEFFFTTLKVS 595 FFT +K++ Sbjct: 65 IQTPFFTPIKLT 76
>MAK21_YEAST (Q12176) Ribosome biogenesis protein MAK21 (Maintenance of killer| protein 21) (Nucleolar complex protein 1) Length = 1025 Score = 33.1 bits (74), Expect = 0.63 Identities = 14/67 (20%), Positives = 37/67 (55%) Frame = +2 Query: 197 EGSSGQDTNLPASQREESPSSSLGATLQDPLAGRVENGSFEDVTQEDQSSLYNFLYPSKE 376 E +S +++ +PA ++E + S+ +T++ ++NGS ++ ++++L + P E Sbjct: 126 ESTSSKESKIPAQEKEHAQSNIASSTIEKTSQESIDNGSEQEENTVEEANLSSDQEPESE 185 Query: 377 LLPDDKE 397 +K+ Sbjct: 186 SAEKEKK 192
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 32.0 bits (71), Expect = 1.4 Identities = 13/51 (25%), Positives = 28/51 (54%) Frame = -3 Query: 178 VPAAAVEGLGRA*GQMGKGDVVATEEDTAELRWRAGEQRSCASHGLSRELD 26 + ++ + R G++ +V T +DTA + W+ G+ R+ ++ L R +D Sbjct: 2666 ITSSCTVAVARVPGKLAPPEVTQTYQDTALVLWKPGDSRAPCTYTLERRVD 2716
>YDIJ_BACHD (Q9Z9P4) Hypothetical protein BH0553| Length = 253 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +2 Query: 386 DDKEMSIFDHLEELRARIFISVL-AVGASIIGCFAFSKDIIKILEAPVS 529 ++++MS+ DH+ ELR RI I V+ V A ++G F + I + AP + Sbjct: 2 NERDMSLMDHIAELRRRILIIVVFFVIALVVGFFLATPMITYLQGAPTA 50
>TATC_MYCLE (P54078) Sec-independent protein translocase protein tatC homolog| Length = 310 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = +2 Query: 389 DKEMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEA 520 D MS+ DHL ELR R+ IS+ A+ + I F + I LE+ Sbjct: 22 DATMSLIDHLTELRTRLLISLAAIVVTTIFGFIWYSHSIFGLES 65
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 31.2 bits (69), Expect = 2.4 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 10/79 (12%) Frame = +2 Query: 80 PPQLGSILLRRH--HISLPHLS-SCTPEPLHCRRRHLRCSAVEGSSGQ-DTNLPAS---- 235 PP+ G RRH I+ HLS +PE +RR + AV G +G+ DT P Sbjct: 877 PPEAGERPDRRHVFKITQSHLSWYFSPETEELQRRWM---AVLGRAGRGDTFCPGPTLSE 933 Query: 236 --QREESPSSSLGATLQDP 286 + EE+P ++LGAT + P Sbjct: 934 DREMEEAPVAALGATAEPP 952
>TATC_MYCTU (P66895) Sec-independent protein translocase protein tatC homolog| Length = 308 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 19/87 (21%) Frame = +2 Query: 389 DKEMSIFDHLEELRARIFISVLAV-GASIIGCFAFSKDIIKI-----------------L 514 D MS+ DHL ELR R+ IS+ A+ +I G +S I + Sbjct: 22 DATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQSA 81 Query: 515 EAPVSVQG-VRFLQLSPGEFFFTTLKV 592 A +S G R L +P + F LKV Sbjct: 82 RADISADGECRLLATAPFDQFMLRLKV 108
>TATC_MYCBO (P66896) Sec-independent protein translocase protein tatC homolog| Length = 308 Score = 31.2 bits (69), Expect = 2.4 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 19/87 (21%) Frame = +2 Query: 389 DKEMSIFDHLEELRARIFISVLAV-GASIIGCFAFSKDIIKI-----------------L 514 D MS+ DHL ELR R+ IS+ A+ +I G +S I + Sbjct: 22 DATMSLVDHLTELRTRLLISLAAILVTTIFGFVWYSHSIFGLDSLGEWLRHPYCALPQSA 81 Query: 515 EAPVSVQG-VRFLQLSPGEFFFTTLKV 592 A +S G R L +P + F LKV Sbjct: 82 RADISADGECRLLATAPFDQFMLRLKV 108
>TATCY_BACSU (O05523) Sec-independent protein translocase protein tatCy| Length = 254 Score = 31.2 bits (69), Expect = 2.4 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 395 EMSIFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILE 517 +MS+ +H+ ELR R+ I LA I F +K II L+ Sbjct: 8 QMSLLEHIAELRKRLLIVALAFVVFFIAGFFLAKPIIVYLQ 48
>YEC2_CAEEL (O45686) Hypothetical protein K11D2.2 precursor| Length = 393 Score = 30.8 bits (68), Expect = 3.1 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 Query: 257 SMETLLFETLANSCPGRCSP 198 S+ET FET+ SCPG C P Sbjct: 373 SVETSRFETILQSCPGECYP 392
>Y124_METJA (Q57588) Hypothetical protein MJ0124| Length = 1075 Score = 30.8 bits (68), Expect = 3.1 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = +2 Query: 317 EDVTQEDQSSLYNFLYPSKELLPDDKEMS-----IFDHLEELRARIFISVLAVGASIIGC 481 ED+ D+ L ++ SK +L + K + I D +EE + V + +GC Sbjct: 519 EDINLFDRKKLPKYINKSKTILLNPKRIDKVAKYIVDRIEEDTENFKFKAMVVAVNRLGC 578 Query: 482 FAFSKDIIKILE 517 F K + K L+ Sbjct: 579 VRFKKALDKYLK 590
>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein homolog) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 960 Score = 30.4 bits (67), Expect = 4.1 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 10/86 (11%) Frame = +2 Query: 80 PPQLGSILLRRH--HISLPHLS-SCTPEPLHCRRRHLRCSAVEGSSGQ-DTNLPA----- 232 PP+ G RRH I+ HLS +PE +RR + AV G +G+ DT P Sbjct: 876 PPEAGERPDRRHVFKITQSHLSWYFSPETEELQRRWM---AVLGRAGRGDTFCPGPTLSE 932 Query: 233 -SQREESPSSSLGATLQDPLAGRVEN 307 + EE+P ++ GAT + P A + + Sbjct: 933 DKEMEETPVAASGATAEPPEASQTRD 958
>TATC_ECOLI (P69423) Sec-independent protein translocase protein tatC| Length = 257 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = +2 Query: 404 IFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPV---SVQGVRFLQLSPGEFF 574 + HL ELR R+ ++AV + F+ DI ++ AP+ QG + F Sbjct: 8 LITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPF 67 Query: 575 FTTLKVS 595 FT +K++ Sbjct: 68 FTPIKLT 74
>TATC_ECO57 (P69424) Sec-independent protein translocase protein tatC| Length = 257 Score = 30.4 bits (67), Expect = 4.1 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = +2 Query: 404 IFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPV---SVQGVRFLQLSPGEFF 574 + HL ELR R+ ++AV + F+ DI ++ AP+ QG + F Sbjct: 8 LITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPF 67 Query: 575 FTTLKVS 595 FT +K++ Sbjct: 68 FTPIKLT 74
>FA29A_HUMAN (Q7Z4H7) Protein FAM29A| Length = 955 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = +2 Query: 299 VENGSFEDVTQEDQSSLYNFLYPSKELLPDDKEMSIFDHLEELRARIFIS 448 VEN DV + +SS + P+K+ P KE DHL E AR +S Sbjct: 504 VENSPLSDVAKNTESSAFGGSLPAKKSDPFQKEQ---DHLVEEVARAVLS 550
>TIF1B_HUMAN (Q13263) Transcription intermediary factor 1-beta (TIF1-beta)| (Tripartite motif protein 28) (Nuclear corepressor KAP-1) (KRAB-associated protein 1) (KAP-1) (KRAB-interacting protein 1) (KRIP-1) (RING finger protein 96) Length = 835 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = +3 Query: 144 ARPSPSTAAAGTFAVPPLRGAAARTRICQRLKEKSLHRAASAPPS 278 A P TA AGT PPL G A +KE+ A APP+ Sbjct: 530 ATGQPGTAPAGTPGAPPLAGMAI-------VKEEETEAAIGAPPT 567
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 29.6 bits (65), Expect = 6.9 Identities = 18/32 (56%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +3 Query: 123 PFPICPHARPSPST--AAAGTFAVPPLRGAAA 212 P PI P PS ST A GT A PP GAAA Sbjct: 1044 PPPITPPTCPSTSTPPAGPGTSAQPPCSGAAA 1075
>PPNK1_ANAVT (Q3MBU3) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 305 Score = 29.3 bits (64), Expect = 9.1 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +2 Query: 476 GCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFF 574 GC+ F +D + + +P SV +F++L P EFF Sbjct: 253 GCYIFPEDRVYLERSPYSV---KFIRLQPPEFF 282
>PPNK1_ANASP (Q8YN19) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 305 Score = 29.3 bits (64), Expect = 9.1 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +2 Query: 476 GCFAFSKDIIKILEAPVSVQGVRFLQLSPGEFF 574 GC+ F +D + + +P SV +F++L P EFF Sbjct: 253 GCYIFPEDRVYLERSPYSV---KFIRLQPPEFF 282
>ASPD2_BORPE (Q7VX83) Probable L-aspartate dehydrogenase 2 (EC 1.4.1.21)| Length = 267 Score = 29.3 bits (64), Expect = 9.1 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 220 RVLAAAPLNGGTAKVPAAAVEGLGRA*GQMGKGDV-VATEEDTAELRWRA 74 R++AAA G +VPA A+ GL G+ D V E WRA Sbjct: 105 RLIAAAEAGGARIRVPAGAIAGLDYLQAVAGRDDAEVVYESRKPVAAWRA 154
>ASPD2_BORPA (Q7W850) Probable L-aspartate dehydrogenase 2 (EC 1.4.1.21)| Length = 267 Score = 29.3 bits (64), Expect = 9.1 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 220 RVLAAAPLNGGTAKVPAAAVEGLGRA*GQMGKGDV-VATEEDTAELRWRA 74 R++AAA G +VPA A+ GL G+ D V E WRA Sbjct: 105 RLIAAAEAGGARIRVPAGAIAGLDYLQAVAGRDDAEVVYESRKPVAAWRA 154
>ASPD2_BORBR (Q7WLJ8) Probable L-aspartate dehydrogenase 2 (EC 1.4.1.21)| Length = 267 Score = 29.3 bits (64), Expect = 9.1 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 220 RVLAAAPLNGGTAKVPAAAVEGLGRA*GQMGKGDV-VATEEDTAELRWRA 74 R++AAA G +VPA A+ GL G+ D V E WRA Sbjct: 105 RLIAAAEAGGARIRVPAGAIAGLDYLQAVAGRDDAEVVYESRKPVAAWRA 154
>TATC_ECOL6 (Q8FBI6) Sec-independent protein translocase protein tatC| Length = 257 Score = 29.3 bits (64), Expect = 9.1 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = +2 Query: 404 IFDHLEELRARIFISVLAVGASIIGCFAFSKDIIKILEAPV---SVQGVRFLQLSPGEFF 574 + HL ELR R+ +++V + F+ DI ++ AP+ QG + F Sbjct: 8 LITHLIELRKRLLNCIISVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPF 67 Query: 575 FTTLKVS 595 FT +K++ Sbjct: 68 FTPIKLT 74
>OAZ_DROVI (O44535) Ornithine decarboxylase antizyme (ODC-Az) (Protein| gutfeeling) (Fragment) Length = 130 Score = 29.3 bits (64), Expect = 9.1 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 7/67 (10%) Frame = +2 Query: 155 PLHCRRRHLRCSAVEGSSGQD-------TNLPASQREESPSSSLGATLQDPLAGRVENGS 313 P+H R H R S + GSS + + AS R SPSSS + D + + + Sbjct: 4 PVHHRTDHDRASLLTGSSRKSSVDSAGGSLFEASSRASSPSSSSSSECSDTESHDIHSLC 63 Query: 314 FEDVTQE 334 ED QE Sbjct: 64 SEDDCQE 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,172,175 Number of Sequences: 219361 Number of extensions: 1640030 Number of successful extensions: 5636 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5394 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5625 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
