ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39o17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193697.1| Oryza sativa (japonica cultivar-group), predic... 295 9e-77
2dbj|AK067297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 9e-77
3dbj|AB050885.1| Oryza sativa (japonica cultivar-group) OsTATC mR... 295 9e-77
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 285 8e-74
5dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic D... 285 8e-74
6gb|AF284759.1|AF284759 Pisum sativum TatC (tatC) mRNA, complete ... 58 3e-05
7ref|XM_546528.2| PREDICTED: Canis familiaris similar to SNF1-lik... 44 0.52
8emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-7... 44 0.52
9emb|AL928654.1|CNS08CBD Human chromosome 14 DNA sequence BAC R-5... 44 0.52
10gb|AC165344.3| Mus musculus BAC clone RP23-390P7 from chromosome... 42 2.1
11gb|AC125142.4| Mus musculus BAC clone RP24-342G10 from chromosom... 42 2.1
12ref|XM_668438.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.1
13gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome... 42 2.1
14gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosom... 42 2.1
15dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
16gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
17emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327... 42 2.1
18gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, co... 40 8.2
19gb|DQ272244.1| Cymbopogon jwarancusa clone CM001 microsatellite ... 40 8.2
20ref|XM_511104.1| PREDICTED: Pan troglodytes golgi apparatus prot... 40 8.2
21gb|AC150657.1| Pan troglodytes chromosome 8 clone PTB-123K23 map... 40 8.2
22gb|AC150656.1| Pan troglodytes chromosome 8 clone PTB-026H08 map... 40 8.2
23ref|XM_424733.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 8.2
24gb|AF241726.3| Homo sapiens chromosome X, clones RP5-819E23 and ... 40 8.2
25gb|AC165137.1| Pan troglodytes chromosome X clone PTB-012N04 map... 40 8.2
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.2
27gb|AC124473.2| Mus musculus BAC clone RP24-86K23 from chromosome... 40 8.2
28ref|XM_385167.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 8.2
29gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome... 40 8.2
30gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome... 40 8.2
31gb|AC006149.3| Homo sapiens PAC clone RP5-1078A23 from 7, comple... 40 8.2
32emb|CR450821.7| Zebrafish DNA sequence from clone CH211-156B7 in... 40 8.2
33emb|AL731550.11| Human DNA sequence from clone RP11-94H3 on chro... 40 8.2
34emb|AL591599.5| Human DNA sequence from clone RP11-519I15 on chr... 40 8.2
35emb|AL441964.4| Human DNA sequence from clone RP11-151G12 on chr... 40 8.2
36emb|AL359845.30| Human DNA sequence from clone RP11-41L14 on chr... 40 8.2
37emb|AL356308.16| Human DNA sequence from clone RP11-475L16 on ch... 40 8.2
38gb|AC091134.7| Homo sapiens chromosome 17, clone RP11-646F1, com... 40 8.2
39gb|AC109599.4| Homo sapiens chromosome 16 clone RP11-144N1, comp... 40 8.2
40emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on ... 40 8.2
41emb|AL031347.1|HS596H12 Human DNA sequence from clone RP4-596H12... 40 8.2
42emb|AL022401.2|HS93L7 Human DNA sequence from clone RP1-93L7 on ... 40 8.2
43gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.2
44gb|AC011551.3| Homo sapiens chromosome 19 clone LLNLR-276E7, com... 40 8.2
45gb|AC107926.6| Homo sapiens, clone RP11-381P6, complete sequence 40 8.2
46gb|AC090774.6| Homo sapiens chromosome 17, clone RP11-344E13, co... 40 8.2
47gb|AC107462.5| Homo sapiens BAC clone RP11-338B9 from 4, complet... 40 8.2
48gb|AC079904.31| Homo sapiens 12 BAC RP11-84J24 (Roswell Park Can... 40 8.2
49gb|AC087279.10| Homo sapiens chromosome 11, clone RP11-559I10, c... 40 8.2
50gb|AC023078.9| Homo sapiens chromosome 11, clone RP11-583F24, co... 40 8.2
51gb|AC093817.3| Homo sapiens BAC clone RP11-364P22 from 4, comple... 40 8.2
52gb|AC108043.3| Homo sapiens BAC clone RP11-270L13 from 4, comple... 40 8.2
53gb|AC182257.2| Gallus gallus BAC clone CH261-84F14 from chromoso... 40 8.2
54gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chrom... 40 8.2
55gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 8.2
56gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complet... 40 8.2
57gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472... 40 8.2
58dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
59dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
60gb|AC066611.6|AC066611 Homo sapiens chromosome 15 clone RP11-348... 40 8.2
61gb|AC008666.5|AC008666 Homo sapiens chromosome 5 clone CTB-35A8,... 40 8.2
62gb|AC007404.4| Homo sapiens BAC clone RP11-547I5 from 2, complet... 40 8.2
63gb|AC087897.32| Homo sapiens 12 BAC RP11-804F13 (Roswell Park Ca... 40 8.2
64gb|AC121758.14| Homo sapiens 12 BAC RP11-74M13 (Roswell Park Can... 40 8.2
65gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, c... 40 8.2
66gb|AC131055.10| Homo sapiens chromosome 17, clone RP11-846F4, co... 40 8.2
67gb|AC107940.13| Homo sapiens chromosome 17, clone RP11-158C19, c... 40 8.2
68gb|AC132825.8| Homo sapiens chromosome 8, clone RP13-929K23, com... 40 8.2
69dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
70gb|AC150565.1| Pan troglodytes chromosome X clone RP43-009M14 ma... 40 8.2
71dbj|AP005255.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
72gb|AC154455.2| Mus musculus BAC clone RP23-185H13 from 14, compl... 40 8.2
73emb|AL357092.4|CNS05TDR Human chromosome 14 DNA sequence BAC R-1... 40 8.2
74gb|AC175366.1| Pan troglodytes chromosome X clone CH251-499L9 ma... 40 8.2
75gb|AC005553.1|AC005553 Homo sapiens chromosome 17, clone hRPK.11... 40 8.2
76gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, com... 40 8.2
77emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chr... 40 8.2
78gb|AC132822.3| Homo sapiens chromosome 17, clone RP13-885L6, com... 40 8.2 
>ref|NM_193697.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1080

 Score =  295 bits (149), Expect = 9e-77
 Identities = 239/269 (88%)
 Strand = Plus / Plus

                                                                       
Query: 332 gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 391
           ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 322 gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 381

                                                                       
Query: 392 aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 451
           ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 382 aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 441

                                                                       
Query: 452 ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 511
           ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 442 ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 501

                                                                       
Query: 512 cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 571
           || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 502 ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 561

                                        
Query: 572 ttctttacaacattgaaggtttctggtta 600
           |||||||||||||||||||| ||||||||
Sbjct: 562 ttctttacaacattgaaggtctctggtta 590
to top
>dbj|AK067297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104L23, full
           insert sequence
          Length = 1401

 Score =  295 bits (149), Expect = 9e-77
 Identities = 239/269 (88%)
 Strand = Plus / Plus

                                                                       
Query: 332 gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 391
           ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 531 gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 590

                                                                       
Query: 392 aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 451
           ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 591 aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 650

                                                                       
Query: 452 ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 511
           ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 651 ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 710

                                                                       
Query: 512 cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 571
           || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 711 ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 770

                                        
Query: 572 ttctttacaacattgaaggtttctggtta 600
           |||||||||||||||||||| ||||||||
Sbjct: 771 ttctttacaacattgaaggtctctggtta 799
to top
>dbj|AB050885.1| Oryza sativa (japonica cultivar-group) OsTATC mRNA, complete cds
          Length = 1781

 Score =  295 bits (149), Expect = 9e-77
 Identities = 239/269 (88%)
 Strand = Plus / Plus

                                                                        
Query: 332  gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 391
            ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 861  gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 920

                                                                        
Query: 392  aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 451
            ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 921  aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 980

                                                                        
Query: 452  ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 511
            ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 981  ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 1040

                                                                        
Query: 512  cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 571
            || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 1041 ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 1100

                                         
Query: 572  ttctttacaacattgaaggtttctggtta 600
            |||||||||||||||||||| ||||||||
Sbjct: 1101 ttctttacaacattgaaggtctctggtta 1129
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  285 bits (144), Expect = 8e-74
 Identities = 231/260 (88%)
 Strand = Plus / Minus

                                                                            
Query: 332      gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 391
                ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 17340183 gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 17340124

                                                                            
Query: 392      aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 451
                ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 17340123 aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 17340064

                                                                            
Query: 452      ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 511
                ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 17340063 ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 17340004

                                                                            
Query: 512      cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 571
                || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 17340003 ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 17339944

                                    
Query: 572      ttctttacaacattgaaggt 591
                ||||||||||||||||||||
Sbjct: 17339943 ttctttacaacattgaaggt 17339924
to top
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1080D07
          Length = 173856

 Score =  285 bits (144), Expect = 8e-74
 Identities = 231/260 (88%)
 Strand = Plus / Minus

                                                                          
Query: 332    gaagatcagagtagtctatataattttctttatccaagcaaagagctacttccagatgat 391
              ||||| |||||||| || || |||||||||||||| ||||||||||||||||| ||||||
Sbjct: 106444 gaagaacagagtagcctgtacaattttctttatccgagcaaagagctacttcctgatgat 106385

                                                                          
Query: 392    aaggaaatgagtatatttgatcatctagaggaacttcgtgcgaggatatttatatctgta 451
              ||||| ||||||||||||||||||||||||||||||||||  ||||||||| | || |||
Sbjct: 106384 aaggagatgagtatatttgatcatctagaggaacttcgtgacaggatatttgtctcagta 106325

                                                                          
Query: 452    ttggctgttggagcttcaataattggttgttttgctttctccaaagatataattaagatt 511
              ||||||||||| ||| | ||| |||||||||| |||| |||||||||| | ||||  |||
Sbjct: 106324 ttggctgttggtgctgcgatacttggttgtttcgcttactccaaagatcttattagaatt 106265

                                                                          
Query: 512    cttgaagcgcctgttagtgttcagggtgtccgatttttgcagctctcccctggagaattt 571
              || ||||| || ||||||||||||||||| || ||| |||||||||| ||||||||||||
Sbjct: 106264 ctagaagcaccagttagtgttcagggtgttcggtttctgcagctctctcctggagaattt 106205

                                  
Query: 572    ttctttacaacattgaaggt 591
              ||||||||||||||||||||
Sbjct: 106204 ttctttacaacattgaaggt 106185
to top
>gb|AF284759.1|AF284759 Pisum sativum TatC (tatC) mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 1352

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 354 attttctttatccaagcaaagagctacttccagatgataaggaaatgagtatatttgatc 413
           ||||||||||||| || |||||||| || || |||||||| || ||||| ||||||||||
Sbjct: 473 attttctttatcctagtaaagagcttctacccgatgataaagagatgagcatatttgatc 532

            
Query: 414 a 414
           |
Sbjct: 533 a 533
to top
>ref|XM_546528.2| PREDICTED: Canis familiaris similar to SNF1-like kinase 2
            (LOC489410), mRNA
          Length = 4306

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 149  cccgagcccctccactgccgcc 170
            ||||||||||||||||||||||
Sbjct: 2648 cccgagcccctccactgccgcc 2669
to top
>emb|AL928742.3|CNS08CBF Human chromosome 14 DNA sequence BAC R-731F5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176237

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 194    gttgaggggagcagcggccaggacac 219
              |||||||||||||| |||||||||||
Sbjct: 127206 gttgaggggagcaggggccaggacac 127231
to top
>emb|AL928654.1|CNS08CBD Human chromosome 14 DNA sequence BAC R-521B24 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 211509

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 194    gttgaggggagcagcggccaggacac 219
              |||||||||||||| |||||||||||
Sbjct: 208914 gttgaggggagcaggggccaggacac 208889
to top
>gb|AC165344.3| Mus musculus BAC clone RP23-390P7 from chromosome 16, complete sequence
          Length = 193532

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 433    gaggatatttatatctgtatt 453
              |||||||||||||||||||||
Sbjct: 164808 gaggatatttatatctgtatt 164788
to top
>gb|AC125142.4| Mus musculus BAC clone RP24-342G10 from chromosome 12, complete
             sequence
          Length = 174908

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 489   tctccaaagatataattaaga 509
             |||||||||||||||||||||
Sbjct: 97304 tctccaaagatataattaaga 97324
to top
>ref|XM_668438.1| Plasmodium berghei strain ANKA hypothetical protein (PB001094.03.0)
           partial mRNA
          Length = 483

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 348 tatataattttctttatccaa 368
           |||||||||||||||||||||
Sbjct: 54  tatataattttctttatccaa 34
to top
>gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome 9, complete sequence
          Length = 147109

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   ctcccttccccatctgtcctc 141
             |||||||||||||||||||||
Sbjct: 27905 ctcccttccccatctgtcctc 27925



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   ctcccttccccatctgtcctc 141
             |||||||||||||||||||||
Sbjct: 27850 ctcccttccccatctgtcctc 27870
to top
>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence
          Length = 213468

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   ctcccttccccatctgtcctc 141
             |||||||||||||||||||||
Sbjct: 31358 ctcccttccccatctgtcctc 31338



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   ctcccttccccatctgtcctc 141
             |||||||||||||||||||||
Sbjct: 31303 ctcccttccccatctgtcctc 31283
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 274      cctccaagatccacttgcagg 294
                |||||||||||||||||||||
Sbjct: 26047695 cctccaagatccacttgcagg 26047715
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 274      cctccaagatccacttgcagg 294
                |||||||||||||||||||||
Sbjct: 25975871 cctccaagatccacttgcagg 25975891
to top
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161806

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   cctccaagatccacttgcagg 294
             |||||||||||||||||||||
Sbjct: 63976 cctccaagatccacttgcagg 63956
to top
>gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, complete sequence
          Length = 199727

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 348   tatataattttctttatccaagca 371
             ||||||||||||||| ||||||||
Sbjct: 26472 tatataattttctttttccaagca 26449
to top
>gb|DQ272244.1| Cymbopogon jwarancusa clone CM001 microsatellite sequence
          Length = 369

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 ataaggaaatgagtatattt 409
           ||||||||||||||||||||
Sbjct: 265 ataaggaaatgagtatattt 284
to top
>ref|XM_511104.1| PREDICTED: Pan troglodytes golgi apparatus protein 1 (LOC454241),
           mRNA
          Length = 4506

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 58  aggagcgctgctctcccgcccgcc 81
           |||||||| |||||||||||||||
Sbjct: 97  aggagcgccgctctcccgcccgcc 120
to top
>gb|AC150657.1| Pan troglodytes chromosome 8 clone PTB-123K23 map human ortholog p23.1,
              complete sequence
          Length = 173624

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    gtctatataattttctttat 364
              ||||||||||||||||||||
Sbjct: 163115 gtctatataattttctttat 163134
to top
>gb|AC150656.1| Pan troglodytes chromosome 8 clone PTB-026H08 map human ortholog p23.1,
              complete sequence
          Length = 155351

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    gtctatataattttctttat 364
              ||||||||||||||||||||
Sbjct: 148290 gtctatataattttctttat 148309
to top
>ref|XM_424733.1| PREDICTED: Gallus gallus similar to RIKEN cDNA C030011J08
           (LOC427143), mRNA
          Length = 1296

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 caccacatctcccttcccca 132
           ||||||||||||||||||||
Sbjct: 609 caccacatctcccttcccca 590
to top
>gb|AF241726.3| Homo sapiens chromosome X, clones RP5-819E23 and RP1-137P19, Map p11.4,
              complete sequences
          Length = 244978

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 117648 tatataattttctttatcca 117629
to top
>gb|AC165137.1| Pan troglodytes chromosome X clone PTB-012N04 map human ortholog p11.4,
             complete sequence
          Length = 93431

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 74350 tatataattttctttatcca 74331
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      tcctcctccgtcgccaccac 118
               ||||||||||||||||||||
Sbjct: 6356916 tcctcctccgtcgccaccac 6356897
to top
>gb|AC124473.2| Mus musculus BAC clone RP24-86K23 from chromosome 3, complete sequence
          Length = 185436

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 440   tttatatctgtattggctgttgga 463
             ||||| ||||||||||||||||||
Sbjct: 71680 tttatgtctgtattggctgttgga 71703
to top
>ref|XM_385167.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG04991.1)
            partial mRNA
          Length = 1971

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   tcctcctccgtcgccaccac 118
            ||||||||||||||||||||
Sbjct: 1383 tcctcctccgtcgccaccac 1402
to top
>gb|AC132116.3| Mus musculus BAC clone RP24-158K7 from chromosome 2, complete sequence
          Length = 165307

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 558    cccctggagaatttttcttt 577
              ||||||||||||||||||||
Sbjct: 133471 cccctggagaatttttcttt 133452
to top
>gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome 3, complete sequence
          Length = 149451

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 440    tttatatctgtattggctgttgga 463
              ||||| ||||||||||||||||||
Sbjct: 137999 tttatgtctgtattggctgttgga 138022
to top
>gb|AC006149.3| Homo sapiens PAC clone RP5-1078A23 from 7, complete sequence
          Length = 72010

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  ccaaagatataattaagatt 511
            ||||||||||||||||||||
Sbjct: 6176 ccaaagatataattaagatt 6195
to top
>emb|CR450821.7| Zebrafish DNA sequence from clone CH211-156B7 in linkage group 3,
              complete sequence
          Length = 163751

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 472    aattggttgttttgctttctccaaagat 499
              ||||||||||||||  ||||||||||||
Sbjct: 146981 aattggttgttttgaattctccaaagat 146954
to top
>emb|AL731550.11| Human DNA sequence from clone RP11-94H3 on chromosome 10 Contains the
             5' end of a novel gene, the 3' end of the MBL2 gene for
             mannose-binding lectin (protein C) 2 soluble (opsonic
             defect) and a CpG island, complete sequence
          Length = 102532

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 56935 tatataattttctttatcca 56916
to top
>emb|AL591599.5| Human DNA sequence from clone RP11-519I15 on chromosome 6, complete
             sequence
          Length = 46174

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   aggatatttatatctgtatt 453
             ||||||||||||||||||||
Sbjct: 26909 aggatatttatatctgtatt 26890
to top
>emb|AL441964.4| Human DNA sequence from clone RP11-151G12 on chromosome X Contains a
             mortality factor 4 like 1 (MORF4L1) pseudogene and a novel
             pseudogene, complete sequence
          Length = 92775

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 16643 tatataattttctttatcca 16624
to top
>emb|AL359845.30| Human DNA sequence from clone RP11-41L14 on chromosome X tight junction
             protein 4 (peripheral) (TJP4) pseudogene, complete
             sequence
          Length = 122272

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 58635 tatataattttctttatcca 58654
to top
>emb|AL356308.16| Human DNA sequence from clone RP11-475L16 on chromosome 10 Contains the
             5' end of the gene for VPS10 domain receptor protein SORCS
             1 and a CpG island, complete sequence
          Length = 102910

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 22459 tatataattttctttatcca 22440
to top
>gb|AC091134.7| Homo sapiens chromosome 17, clone RP11-646F1, complete sequence
          Length = 156583

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 122828 tatataattttctttatcca 122847
to top
>gb|AC109599.4| Homo sapiens chromosome 16 clone RP11-144N1, complete sequence
          Length = 166598

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    aggagcgctgctctcccgcccgcc 81
             |||||||| |||||||||||||||
Sbjct: 93111 aggagcgccgctctcccgcccgcc 93134
to top
>emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on chromosome 6q12, complete
             sequence
          Length = 158204

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   atataattttctttatccaa 368
             ||||||||||||||||||||
Sbjct: 61154 atataattttctttatccaa 61135
to top
>emb|AL031347.1|HS596H12 Human DNA sequence from clone RP4-596H12 on chromosome 6p22.2-22.3,
             complete sequence
          Length = 175555

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   cagagtagtctatataattt 357
             ||||||||||||||||||||
Sbjct: 34260 cagagtagtctatataattt 34241
to top
>emb|AL022401.2|HS93L7 Human DNA sequence from clone RP1-93L7 on chromosome Xq21 Contains a
             novel pseudogene similar to RIKEN cDNA 6330577E15Rik, a
             pseudogene similar to ring finger protein 34 (RNF34) and
             the 3' end of the CHM gene for choroideremia (Rab escort
             protein 1), complete sequence
          Length = 206784

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 15571 tatataattttctttatcca 15590
to top
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    tcctcctccgtcgccaccac 118
             ||||||||||||||||||||
Sbjct: 37042 tcctcctccgtcgccaccac 37023
to top
>gb|AC011551.3| Homo sapiens chromosome 19 clone LLNLR-276E7, complete sequence
          Length = 37959

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 16337 tatataattttctttatcca 16318
to top
>gb|AC107926.6| Homo sapiens, clone RP11-381P6, complete sequence
          Length = 176040

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 147424 tatataattttctttatcca 147443
to top
>gb|AC090774.6| Homo sapiens chromosome 17, clone RP11-344E13, complete sequence
          Length = 207418

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 128358 tatataattttctttatcca 128377
to top
>gb|AC107462.5| Homo sapiens BAC clone RP11-338B9 from 4, complete sequence
          Length = 192173

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    cagatgataaggaaatgagt 403
              ||||||||||||||||||||
Sbjct: 118488 cagatgataaggaaatgagt 118469
to top
>gb|AC079904.31| Homo sapiens 12 BAC RP11-84J24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 197964

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 385    agatgataaggaaatgagtatatt 408
              |||||||| |||||||||||||||
Sbjct: 191614 agatgatatggaaatgagtatatt 191637
to top
>gb|AC087279.10| Homo sapiens chromosome 11, clone RP11-559I10, complete sequence
          Length = 184523

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 83190 tatataattttctttatcca 83171
to top
>gb|AC023078.9| Homo sapiens chromosome 11, clone RP11-583F24, complete sequence
          Length = 163718

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 115053 tatataattttctttatcca 115072
to top
>gb|AC093817.3| Homo sapiens BAC clone RP11-364P22 from 4, complete sequence
          Length = 183186

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 44339 tatataattttctttatcca 44320
to top
>gb|AC108043.3| Homo sapiens BAC clone RP11-270L13 from 4, complete sequence
          Length = 138020

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  tatataattttctttatcca 367
            ||||||||||||||||||||
Sbjct: 5650 tatataattttctttatcca 5669
to top
>gb|AC182257.2| Gallus gallus BAC clone CH261-84F14 from chromosome ul, complete sequence
          Length = 200594

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    caccacatctcccttcccca 132
              ||||||||||||||||||||
Sbjct: 192987 caccacatctcccttcccca 192968
to top
>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown,
             complete sequence
          Length = 182200

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 66685 tatataattttctttatcca 66666
to top
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 346     tctatataattttctttatc 365
               ||||||||||||||||||||
Sbjct: 1094362 tctatataattttctttatc 1094343
to top
>gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complete sequence
          Length = 176629

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    gcccgccaccgcaactcggc 94
             ||||||||||||||||||||
Sbjct: 90549 gcccgccaccgcaactcggc 90568
to top
>gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472N16, complete sequence
          Length = 190044

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 90800 tatataattttctttatcca 90819
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     cctccactgccgccgccggc 176
               ||||||||||||||||||||
Sbjct: 8720165 cctccactgccgccgccggc 8720184
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      tcctcctccgtcgccaccac 118
               ||||||||||||||||||||
Sbjct: 6356129 tcctcctccgtcgccaccac 6356110
to top
>gb|AC066611.6|AC066611 Homo sapiens chromosome 15 clone RP11-348P16 map 15q21.3, complete
              sequence
          Length = 184355

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 385    agatgataaggaaatgagtatatt 408
              |||||||| |||||||||||||||
Sbjct: 174366 agatgatatggaaatgagtatatt 174343
to top
>gb|AC008666.5|AC008666 Homo sapiens chromosome 5 clone CTB-35A8, complete sequence
          Length = 99108

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   gcccgccaccgcaactcggc 94
            ||||||||||||||||||||
Sbjct: 8354 gcccgccaccgcaactcggc 8335
to top
>gb|AC007404.4| Homo sapiens BAC clone RP11-547I5 from 2, complete sequence
          Length = 168506

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 122   tcccttccccatctgtcctcatgc 145
             ||||||||| ||||||||||||||
Sbjct: 87218 tcccttccctatctgtcctcatgc 87195
to top
>gb|AC087897.32| Homo sapiens 12 BAC RP11-804F13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181166

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 478    ttgttttgctttctccaaagatat 501
              ||||||||||| ||||||||||||
Sbjct: 160442 ttgttttgcttgctccaaagatat 160419
to top
>gb|AC121758.14| Homo sapiens 12 BAC RP11-74M13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 130479

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   tatataattttctttatcca 367
             ||||||||||||||||||||
Sbjct: 40362 tatataattttctttatcca 40343
to top
>gb|AC106858.12| Homo sapiens chromosome 17, clone RP11-347L15, complete sequence
          Length = 160484

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    tctccaaagatataattaag 508
              ||||||||||||||||||||
Sbjct: 126726 tctccaaagatataattaag 126707
to top
>gb|AC131055.10| Homo sapiens chromosome 17, clone RP11-846F4, complete sequence
          Length = 187223

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 138174 tatataattttctttatcca 138193
to top
>gb|AC107940.13| Homo sapiens chromosome 17, clone RP11-158C19, complete sequence
          Length = 164186

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 109697 tatataattttctttatcca 109678
to top
>gb|AC132825.8| Homo sapiens chromosome 8, clone RP13-929K23, complete sequence
          Length = 137261

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 123882 tatataattttctttatcca 123863
to top
>dbj|AP005768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0039C01
          Length = 151054

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   cctccactgccgccgccggc 176
             ||||||||||||||||||||
Sbjct: 78806 cctccactgccgccgccggc 78825
to top
>gb|AC150565.1| Pan troglodytes chromosome X clone RP43-009M14 map human ortholog
            p11.4, complete sequence
          Length = 160315

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  tatataattttctttatcca 367
            ||||||||||||||||||||
Sbjct: 3161 tatataattttctttatcca 3142
to top
>dbj|AP005255.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0087F05
          Length = 143908

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    cctccactgccgccgccggc 176
              ||||||||||||||||||||
Sbjct: 133905 cctccactgccgccgccggc 133924
to top
>gb|AC154455.2| Mus musculus BAC clone RP23-185H13 from 14, complete sequence
          Length = 215308

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tcccttccccatctgtcctc 141
              ||||||||||||||||||||
Sbjct: 132745 tcccttccccatctgtcctc 132764
to top
>emb|AL357092.4|CNS05TDR Human chromosome 14 DNA sequence BAC R-1079H9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188162

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 571   tttctttacaacattgaaggtttc 594
             |||||||||||||||||| |||||
Sbjct: 37204 tttctttacaacattgaaagtttc 37227
to top
>gb|AC175366.1| Pan troglodytes chromosome X clone CH251-499L9 map human ortholog p11.4,
              complete sequence
          Length = 217335

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 170494 tatataattttctttatcca 170475
to top
>gb|AC005553.1|AC005553 Homo sapiens chromosome 17, clone hRPK.112_J_9, complete sequence
          Length = 179651

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   tctccaaagatataattaag 508
             ||||||||||||||||||||
Sbjct: 28282 tctccaaagatataattaag 28263
to top
>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence
          Length = 174902

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 348   tatataattttctttatccaagca 371
             ||||||||||||||| ||||||||
Sbjct: 97262 tatataattttctttttccaagca 97285
to top
>emb|AL772214.3| Mouse DNA sequence from clone RP23-370C18 on chromosome 2, complete
             sequence
          Length = 181349

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   cccctggagaatttttcttt 577
             ||||||||||||||||||||
Sbjct: 76611 cccctggagaatttttcttt 76630
to top
>gb|AC132822.3| Homo sapiens chromosome 17, clone RP13-885L6, complete sequence
          Length = 133778

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    tatataattttctttatcca 367
              ||||||||||||||||||||
Sbjct: 113556 tatataattttctttatcca 113537


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,260,462
Number of Sequences: 3902068
Number of extensions: 6260462
Number of successful extensions: 168620
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 168038
Number of HSP's gapped (non-prelim): 577
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top