>ref|XM_477932.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1398

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                        
Query: 23   tatggcagttgatgatggagaaaggcctgtttcagggcgagaatacaggtcttactacag 82
            ||||||| |||||| || ||||||||| ||||||   |||||| |||| ||| | || ||
Sbjct: 1290 tatggcaattgatgttgaagaaaggcccgtttcatcacgagaacacagatctcattatag 1349

                            
Query: 83   aagagattctacagta 98
            |||||||||| |||||
Sbjct: 1350 aagagattctgcagta 1365

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                            
Query: 23       tatggcagttgatgatggagaaaggcctgtttcagggcgagaatacaggtcttactacag 82
                ||||||| |||||| || ||||||||| ||||||   |||||| |||| ||| | || ||
Sbjct: 15668144 tatggcaattgatgttgaagaaaggcccgtttcatcacgagaacacagatctcattatag 15668203

                                
Query: 83       aagagattctacagta 98
                |||||||||| |||||
Sbjct: 15668204 aagagattctgcagta 15668219



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 540      cctgcgatgtgtaattgtagcgaatgcta 568
                |||| ||||||||||||| ||||||||||
Sbjct: 15668780 cctgggatgtgtaattgtggcgaatgcta 15668808

>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0075N02
          Length = 186945

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                         
Query: 23    tatggcagttgatgatggagaaaggcctgtttcagggcgagaatacaggtcttactacag 82
             ||||||| |||||| || ||||||||| ||||||   |||||| |||| ||| | || ||
Sbjct: 66001 tatggcaattgatgttgaagaaaggcccgtttcatcacgagaacacagatctcattatag 66060

                             
Query: 83    aagagattctacagta 98
             |||||||||| |||||
Sbjct: 66061 aagagattctgcagta 66076



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 540   cctgcgatgtgtaattgtagcgaatgcta 568
             |||| ||||||||||||| ||||||||||
Sbjct: 66637 cctgggatgtgtaattgtggcgaatgcta 66665

>gb|AC104981.9| Homo sapiens chromosome 17, clone RP11-316M20, complete sequence
          Length = 193181

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 398   atttgctgcaaccagtgatggat 420
             |||||||||||||||||||||||
Sbjct: 42753 atttgctgcaaccagtgatggat 42731

>ref|XM_477933.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 870

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 540 cctgcgatgtgtaattgtagcgaatgcta 568
           |||| ||||||||||||| ||||||||||
Sbjct: 328 cctgggatgtgtaattgtggcgaatgcta 356

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 63      gaatacaggtcttactacaga 83
               |||||||||||||||||||||
Sbjct: 2892794 gaatacaggtcttactacaga 2892814

>gb|AC074093.6| Homo sapiens BAC clone RP11-206I11 from 2, complete sequence
          Length = 155182

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 328   cttatcagaatggccattact 348
             |||||||||||||||||||||
Sbjct: 46143 cttatcagaatggccattact 46123

>dbj|AK060184.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-C08, full
           insert sequence
          Length = 870

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 540 cctgcgatgtgtaattgtagcgaatgcta 568
           |||| ||||||||||||| ||||||||||
Sbjct: 328 cctgggatgtgtaattgtggcgaatgcta 356

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 41      agaaaggcctgtttcagggcg 61
               |||||||||||||||||||||
Sbjct: 5474836 agaaaggcctgtttcagggcg 5474856

>emb|AL713897.7| Mouse DNA sequence from clone RP23-373J8 on chromosome X, complete
             sequence
          Length = 166240

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   ataataaatatccaaaacata 195
             |||||||||||||||||||||
Sbjct: 66479 ataataaatatccaaaacata 66499

>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 266     cttggagagggcacatgatgaatc 289
               ||||||||||| ||||||||||||
Sbjct: 4466222 cttggagaggggacatgatgaatc 4466199

>gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosome 13, complete
             sequence
          Length = 191036

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 571   aggggcagaagtcagcagcagccc 594
             ||||| ||||||||||||||||||
Sbjct: 72956 aggggaagaagtcagcagcagccc 72933

>gb|AC130550.4| Mus musculus BAC clone RP24-463N15 from chromosome 7, complete sequence
          Length = 152908

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    ggggcagaagtcagcagcag 591
              ||||||||||||||||||||
Sbjct: 112932 ggggcagaagtcagcagcag 112913

>gb|AC123064.3| Mus musculus BAC clone RP23-220P13 from chromosome 10, complete
            sequence
          Length = 186172

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 461  ggtggcttcaacttctcaag 480
            ||||||||||||||||||||
Sbjct: 7717 ggtggcttcaacttctcaag 7736

>gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosome 5, complete sequence
          Length = 218179

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   tcagtgtgagaatgttgaag 396
             ||||||||||||||||||||
Sbjct: 86026 tcagtgtgagaatgttgaag 86007

>gb|AC091685.4| Homo sapiens BAC clone RP11-165H4 from 7, complete sequence
          Length = 68299

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   gcttcaacttctcaagtagc 484
             ||||||||||||||||||||
Sbjct: 32391 gcttcaacttctcaagtagc 32372

>emb|AL135936.11| Human DNA sequence from clone RP11-3K6 on chromosome 20, complete
             sequence
          Length = 116341

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   gagaatgttgaagaatttgc 403
             ||||||||||||||||||||
Sbjct: 45613 gagaatgttgaagaatttgc 45632

>gb|AC152414.7| Mus musculus BAC clone RP23-358O14 from chromosome 10, complete sequence
          Length = 230322

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 461    ggtggcttcaacttctcaag 480
              ||||||||||||||||||||
Sbjct: 141801 ggtggcttcaacttctcaag 141820

>gb|AC153615.4| Mus musculus 6 BAC RP23-24I14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 183030

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 383   tgagaatgttgaagaatttgctgc 406
             ||||||||||||| ||||||||||
Sbjct: 89197 tgagaatgttgaaaaatttgctgc 89174

>gb|AC146755.23| Medicago truncatula clone mth2-15i15, complete sequence
          Length = 108159

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    gcagttgatgatggagaaag 46
             ||||||||||||||||||||
Sbjct: 29682 gcagttgatgatggagaaag 29701

>gb|AC119802.43| Mus musculus chromosome 3, clone RP23-64P1, complete sequence
          Length = 231972

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   tgcagcatatgaagcatcat 219
             ||||||||||||||||||||
Sbjct: 73406 tgcagcatatgaagcatcat 73387

>dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029a,
             complete sequence
          Length = 53909

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 529   tgccttcaagtcctgcgatgtgta 552
             |||||||||| |||||||||||||
Sbjct: 22834 tgccttcaaggcctgcgatgtgta 22857


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,168,943
Number of Sequences: 3902068
Number of extensions: 5168943
Number of successful extensions: 97889
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97773
Number of HSP's gapped (non-prelim): 116
length of query: 606
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 583
effective length of database: 17,143,297,704
effective search space: 9994542561432
effective search space used: 9994542561432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)