ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags39m20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009604.1| Triticum aestivum clone wre1n.pk0082.c6:fis, full... 954 0.0
2gb|AY011123.1| Dactylis glomerata mitochondrial processing pepti... 571 e-160
3dbj|AK101856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 402 e-109
4dbj|AK071930.1| Oryza sativa (japonica cultivar-group) cDNA clon... 402 e-109
5ref|NM_189667.1| Oryza sativa (japonica cultivar-group), predic... 307 2e-80
6gb|AY108609.1| Zea mays PCO088346 mRNA sequence 283 3e-73
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
9gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete seq... 46 0.13
10gb|AC110209.11| Mus musculus chromosome 12, clone RP23-279O18, c... 42 2.0
11ref|XM_844275.1| PREDICTED: Canis familiaris hypothetical protei... 42 2.0
12gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosom... 42 2.0
13gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, comple... 42 2.0
14ref|XM_737283.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 2.0
15emb|AL022144.1|HS35C21 Human DNA sequence from clone RP1-35C21 o... 42 2.0
16dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 42 2.0
17gb|AY052369.1| Homo sapiens PP2A B56 gamma gene, complete cds, a... 42 2.0
18gb|AC104109.3| Homo sapiens chromosome 5 clone CTD-2410N18, comp... 42 2.0
19gb|AC021086.4|AC021086 Homo sapiens chromosome 5 clone CTD-2001C... 42 2.0
20gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C... 42 2.0
21dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15,... 42 2.0
22emb|BX469897.6| Zebrafish DNA sequence from clone CH211-39F22 in... 42 2.0
23emb|AL118558.6|CNS01DRV Human chromosome 14 DNA sequence BAC R-1... 42 2.0
24dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.0
25emb|CT009504.11| Mouse DNA sequence from clone RP23-149M9 on chr... 42 2.0
26gb|AC110037.13| Mus musculus chromosome 5, clone RP23-257E17, co... 42 2.0
27gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 42 2.0
28dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 2.0
29gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome... 40 8.0
30emb|Z83104.1|CEF09B12 Caenorhabditis elegans Cosmid F09B12, comp... 40 8.0
31gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosom... 40 8.0
32gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, comple... 40 8.0
33gb|AE004284.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 8.0
34emb|AL731543.9| Human DNA sequence from clone RP11-318C4 on chro... 40 8.0
35gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, comp... 40 8.0
36emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 8.0
37gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosom... 40 8.0
38ref|NG_005514.1| Homo sapiens deleted in malignant brain tumors ... 40 8.0
39gb|AC073587.6| Homo sapiens chromosome 10 clone RP11-572P18, com... 40 8.0
40dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 40 8.0
41gb|AC098477.2| Homo sapiens chromosome 3 clone RP11-733H11, comp... 40 8.0
42gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, comp... 40 8.0
43gb|AC092264.2| Homo sapiens chromosome 1 clone RP4-640P3, comple... 40 8.0
44gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 40 8.0
45gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 8.0
46emb|CR391569.1| Gallus gallus finished cDNA, clone ChEST804i17 40 8.0
47gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 8.0
48ref|NM_078106.1| Caenorhabditis elegans F09B12.5 (F09B12.5) mRNA... 40 8.0
49ref|NM_001015794.1| Xenopus tropicalis MGC108402 protein (MGC108... 40 8.0
50gb|AC153937.11| Mus musculus 10 BAC RP24-458J4 (Roswell Park Can... 40 8.0
51gb|AF353165.1|AF353165 Toxoplasma gondii microneme protein 8 (MI... 40 8.0
52dbj|AB079243.1| Crassostrea gigas opp mRNA for PAR domain subfam... 40 8.0
53gb|BC089743.1| Xenopus tropicalis MGC108402 protein, mRNA (cDNA ... 40 8.0
54gb|AC027663.14|AC027663 Homo sapiens chromosome 1 clone RP11-285... 40 8.0
55dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 8.0
56dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 8.0
57emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 40 8.0
58gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, com... 40 8.0
59emb|AL607129.16| Mouse DNA sequence from clone RP23-120H2 on chr... 40 8.0 
>gb|BT009604.1| Triticum aestivum clone wre1n.pk0082.c6:fis, full insert mRNA
            sequence
          Length = 1676

 Score =  954 bits (481), Expect = 0.0
 Identities = 548/569 (96%), Gaps = 1/569 (0%)
 Strand = Plus / Plus

                                                                        
Query: 18   gcaactggnaacagtaaagccaaaatctgtctatgttggtggagaatatagacgtgcagc 77
            |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 638  gcaactgg-aacaggaaagccaaaatctgtctatgttggtggagaatatagacgggcagc 696

                                                                        
Query: 78   agattcatcgaacacagatcttgctttggcatttgagctcccaggtggatggctgaaaga 137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697  agattcatcgaacacagatcttgctttggcatttgagctcccaggtggatggctgaaaga 756

                                                                        
Query: 138  aaaagaatttgctactgcatctgttcttcaggcacttctgggtggtggtggtgtgtttac 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 757  aaaagaatttgctactgcatctgttcttcaggcacttctgggtggtggtggcgtctttac 816

                                                                        
Query: 198  ctggggaagacctggaaaaggcttgcattcacgcctgaaccccctcgtaaatgaatttga 257
            ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 817  ctggggaagacctggaaaaggcttgcattcacgtctaaatcccctcgtaaatgaatttga 876

                                                                        
Query: 258  cgaaatcaagtcgatctccgctttcaaaaatgttcacagtaacaccggcatttttggaat 317
            | ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 877  ccaaatcaaatcgatctccgctttcaaaaatgttcacagtaacactggcatttttggaat 936

                                                                        
Query: 318  tcatgcatcgactgatgcagcatttgttcctaaagttattgacttggcagccagagaact 377
            |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937  tcatacatcgactgaagcagcatttgttcctaaagttattgacttggcagccagagaact 996

                                                                        
Query: 378  cacttccctcgcgacccctggtcaagttgaccaaacccaactggaccgtgctaaagcatc 437
            ||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 997  cacttcccttgctactcctggtcaagttgaccaaacccaactggaacgtgctaaagcatt 1056

                                                                        
Query: 438  tgcaaaatcagttatcttgaggaacctggaatcaaaggcatcaacaactgaagacatggg 497
            ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 tgcaaaatcagctatcttgaagaacctggaatcaaaggcatcaacaactgaagacatggg 1116

                                                                        
Query: 498  gcgccaagcattggcatttggtgaaaggaaacctgtggagcagcttctaaaggctgttga 557
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1117 gcgccaagcattggcatttggtgaaaggaaacctgtggagcagcttcttaaggctgttga 1176

                                         
Query: 558  tgctataactctggcagatgtatcaactg 586
            |||||||||||||||||||||||||||||
Sbjct: 1177 tgctataactctggcagatgtatcaactg 1205
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>gb|AY011123.1| Dactylis glomerata mitochondrial processing peptidase alpha-chain
            precursor (DGMPP) mRNA, complete cds
          Length = 1799

 Score =  571 bits (288), Expect = e-160
 Identities = 469/528 (88%), Gaps = 1/528 (0%)
 Strand = Plus / Plus

                                                                        
Query: 18   gcaactggnaacagtaaagccaaaatctgtctatgttggtggagaatatagacgtgcagc 77
            |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 924  gcaactgg-aacagcaaagccaaaatctgtctatgttggtggagaatatagacgggcagc 982

                                                                        
Query: 78   agattcatcgaacacagatcttgctttggcatttgagctcccaggtggatggctgaaaga 137
            ||||||||||||||||||  ||||| |||| |||||||| || ||||||||| |||| ||
Sbjct: 983  agattcatcgaacacagaaattgctctggcttttgagcttcctggtggatggttgaagga 1042

                                                                        
Query: 138  aaaagaatttgctactgcatctgttcttcaggcacttctgggtggtggtggtgtgtttac 197
            |||||| | || ||||||||| |||||||||||||||||||||||||||||| ||||| |
Sbjct: 1043 aaaagattatgttactgcatcagttcttcaggcacttctgggtggtggtggtttgttttc 1102

                                                                        
Query: 198  ctggggaagacctggaaaaggcttgcattcacgcctgaaccccctcgtaaatgaatttga 257
             ||||||||||||||||| ||||||||||| ||||| || |  ||||| |||||||||||
Sbjct: 1103 ttggggaagacctggaaagggcttgcattcccgcctaaatcatctcgtgaatgaatttga 1162

                                                                        
Query: 258  cgaaatcaagtcgatctccgctttcaaaaatgttcacagtaacaccggcatttttggaat 317
            | ||||||| || ||||| ||||||||  |||||||||||| ||| ||||||||||||||
Sbjct: 1163 ccaaatcaaatcaatctctgctttcaaggatgttcacagtaccactggcatttttggaat 1222

                                                                        
Query: 318  tcatgcatcgactgatgcagcatttgttcctaaagttattgacttggcagccagagaact 377
            |||| |||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||
Sbjct: 1223 tcatacatctactgatgcagcatttgctcctaaagctattgacttagcagccagagaact 1282

                                                                        
Query: 378  cacttccctcgcgacccctggtcaagttgaccaaacccaactggaccgtgctaaagcatc 437
            |||||| ||||| || ||||||||||||||||| |||||||| || ||||||||||||| 
Sbjct: 1283 cacttcactcgcaactcctggtcaagttgaccagacccaactagatcgtgctaaagcatt 1342

                                                                        
Query: 438  tgcaaaatcagttatcttgaggaacctggaatcaaaggcatcaacaactgaagacatggg 497
             || |||||||  ||||||   | ||||||||||||||||||| |||||||||| |||||
Sbjct: 1343 agctaaatcagcaatcttggcaagcctggaatcaaaggcatcagcaactgaagatatggg 1402

                                                            
Query: 498  gcgccaagcattggcatttggtgaaaggaaacctgtggagcagcttct 545
            ||||||||  |||||||||||||||||||||||||| ||||| |||||
Sbjct: 1403 gcgccaagttttggcatttggtgaaaggaaacctgttgagcaacttct 1450
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>dbj|AK101856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O10, full
            insert sequence
          Length = 2012

 Score =  402 bits (203), Expect = e-109
 Identities = 446/527 (84%)
 Strand = Plus / Plus

                                                                        
Query: 33   aaagccaaaatctgtctatgttggtggagaatatagacgtgcagcagattcatcgaacac 92
            ||||||||| |||  |||||||||||| ||||||||| |  | || ||||||||||||||
Sbjct: 992  aaagccaaagtctacctatgttggtggggaatatagaagaactgctgattcatcgaacac 1051

                                                                        
Query: 93   agatcttgctttggcatttgagctcccaggtggatggctgaaagaaaaagaatttgctac 152
            |||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||||||  ||
Sbjct: 1052 agatgttgctttggcatttgaggtccctggtgggtggctcaaagaaaaagaatttgtaac 1111

                                                                        
Query: 153  tgcatctgttcttcaggcacttctgggtggtggtggtgtgtttacctggggaagacctgg 212
             | ||| ||||||||| | ||||| ||||| |||||    | | |||||||||| | |||
Sbjct: 1112 agtatcagttcttcagacccttcttggtggcggtggcacatattcctggggaaggcatgg 1171

                                                                        
Query: 213  aaaaggcttgcattcacgcctgaaccccctcgtaaatgaatttgacgaaatcaagtcgat 272
            |||||||||||||||| | || || |  |||| ||||||||| ||| | || |  |||||
Sbjct: 1172 aaaaggcttgcattcaagtctaaatcatctcgcaaatgaattcgaccagattagatcgat 1231

                                                                        
Query: 273  ctccgctttcaaaaatgttcacagtaacaccggcatttttggaattcatgcatcgactga 332
              | ||||||||  |||||||||||||||| |||||||||||||||||| |||| |||||
Sbjct: 1232 agctgctttcaaggatgttcacagtaacactggcatttttggaattcatacatctactga 1291

                                                                        
Query: 333  tgcagcatttgttcctaaagttattgacttggcagccagagaactcacttccctcgcgac 392
            ||||||||| |||||||| | ||||||||||||| ||||||| |||||||| || || ||
Sbjct: 1292 tgcagcattcgttcctaaggctattgacttggcaaccagagagctcacttctcttgccac 1351

                                                                        
Query: 393  ccctggtcaagttgaccaaacccaactggaccgtgctaaagcatctgcaaaatcagttat 452
             |||||  ||||||||||||| ||||| ||||||||||||||  | || |||||||  ||
Sbjct: 1352 tcctggaaaagttgaccaaactcaacttgaccgtgctaaagcgacagctaaatcagcaat 1411

                                                                        
Query: 453  cttgaggaacctggaatcaaaggcatcaacaactgaagacatggggcgccaagcattggc 512
            ||||| |||||||||||||||||||||| |||||||||||||||| || |||  ||||||
Sbjct: 1412 cttgatgaacctggaatcaaaggcatcagcaactgaagacatgggacggcaaatattggc 1471

                                                           
Query: 513  atttggtgaaaggaaacctgtggagcagcttctaaaggctgttgatg 559
             |||||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 1472 ctttggtgaaaggaaacctgttgagcaccttctcaaggctgttgatg 1518
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>dbj|AK071930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N24, full
            insert sequence
          Length = 1991

 Score =  402 bits (203), Expect = e-109
 Identities = 446/527 (84%)
 Strand = Plus / Plus

                                                                        
Query: 33   aaagccaaaatctgtctatgttggtggagaatatagacgtgcagcagattcatcgaacac 92
            ||||||||| |||  |||||||||||| ||||||||| |  | || ||||||||||||||
Sbjct: 986  aaagccaaagtctacctatgttggtggggaatatagaagaactgctgattcatcgaacac 1045

                                                                        
Query: 93   agatcttgctttggcatttgagctcccaggtggatggctgaaagaaaaagaatttgctac 152
            |||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||||||  ||
Sbjct: 1046 agatgttgctttggcatttgaggtccctggtgggtggctcaaagaaaaagaatttgtaac 1105

                                                                        
Query: 153  tgcatctgttcttcaggcacttctgggtggtggtggtgtgtttacctggggaagacctgg 212
             | ||| ||||||||| | ||||| ||||| |||||    | | |||||||||| | |||
Sbjct: 1106 agtatcagttcttcagacccttcttggtggcggtggcacatattcctggggaaggcatgg 1165

                                                                        
Query: 213  aaaaggcttgcattcacgcctgaaccccctcgtaaatgaatttgacgaaatcaagtcgat 272
            |||||||||||||||| | || || |  |||| ||||||||| ||| | || |  |||||
Sbjct: 1166 aaaaggcttgcattcaagtctaaatcatctcgcaaatgaattcgaccagattagatcgat 1225

                                                                        
Query: 273  ctccgctttcaaaaatgttcacagtaacaccggcatttttggaattcatgcatcgactga 332
              | ||||||||  |||||||||||||||| |||||||||||||||||| |||| |||||
Sbjct: 1226 agctgctttcaaggatgttcacagtaacactggcatttttggaattcatacatctactga 1285

                                                                        
Query: 333  tgcagcatttgttcctaaagttattgacttggcagccagagaactcacttccctcgcgac 392
            ||||||||| |||||||| | ||||||||||||| ||||||| |||||||| || || ||
Sbjct: 1286 tgcagcattcgttcctaaggctattgacttggcaaccagagagctcacttctcttgccac 1345

                                                                        
Query: 393  ccctggtcaagttgaccaaacccaactggaccgtgctaaagcatctgcaaaatcagttat 452
             |||||  ||||||||||||| ||||| ||||||||||||||  | || |||||||  ||
Sbjct: 1346 tcctggaaaagttgaccaaactcaacttgaccgtgctaaagcgacagctaaatcagcaat 1405

                                                                        
Query: 453  cttgaggaacctggaatcaaaggcatcaacaactgaagacatggggcgccaagcattggc 512
            ||||| |||||||||||||||||||||| |||||||||||||||| || |||  ||||||
Sbjct: 1406 cttgatgaacctggaatcaaaggcatcagcaactgaagacatgggacggcaaatattggc 1465

                                                           
Query: 513  atttggtgaaaggaaacctgtggagcagcttctaaaggctgttgatg 559
             |||||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 1466 ctttggtgaaaggaaacctgttgagcaccttctcaaggctgttgatg 1512
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>ref|NM_189667.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2478

 Score =  307 bits (155), Expect = 2e-80
 Identities = 311/363 (85%)
 Strand = Plus / Plus

                                                                        
Query: 197  cctggggaagacctggaaaaggcttgcattcacgcctgaaccccctcgtaaatgaatttg 256
            |||||||||| | ||||||||||||||||||| | || || |  |||| ||||||||| |
Sbjct: 1703 cctggggaaggcatggaaaaggcttgcattcaagtctaaatcatctcgcaaatgaattcg 1762

                                                                        
Query: 257  acgaaatcaagtcgatctccgctttcaaaaatgttcacagtaacaccggcatttttggaa 316
            || | || |  |||||  | ||||||||  |||||||||||||||| |||||||||||||
Sbjct: 1763 accagattagatcgatagctgctttcaaggatgttcacagtaacactggcatttttggaa 1822

                                                                        
Query: 317  ttcatgcatcgactgatgcagcatttgttcctaaagttattgacttggcagccagagaac 376
            ||||| |||| |||||||||||||| |||||||| | ||||||||||||| ||||||| |
Sbjct: 1823 ttcatacatctactgatgcagcattcgttcctaaggctattgacttggcaaccagagagc 1882

                                                                        
Query: 377  tcacttccctcgcgacccctggtcaagttgaccaaacccaactggaccgtgctaaagcat 436
            ||||||| || || || |||||  ||||||||||||| ||||| ||||||||||||||  
Sbjct: 1883 tcacttctcttgccactcctggaaaagttgaccaaactcaacttgaccgtgctaaagcga 1942

                                                                        
Query: 437  ctgcaaaatcagttatcttgaggaacctggaatcaaaggcatcaacaactgaagacatgg 496
            | || |||||||  ||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 1943 cagctaaatcagcaatcttgatgaacctggaatcaaaggcatcagcaactgaagacatgg 2002

                                                                        
Query: 497  ggcgccaagcattggcatttggtgaaaggaaacctgtggagcagcttctaaaggctgttg 556
            | || |||  |||||| |||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 2003 gacggcaaatattggcctttggtgaaaggaaacctgttgagcaccttctcaaggctgttg 2062

               
Query: 557  atg 559
            |||
Sbjct: 2063 atg 2065



 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                        
Query: 33   aaagccaaaatctgtctatgttggtggagaatatagacgtgcagcagattcatcgaacac 92
            ||||||||| |||  |||||||||||| ||||||||| |  | || ||||||||||||||
Sbjct: 1548 aaagccaaagtctacctatgttggtggggaatatagaagaactgctgattcatcgaacac 1607

                                                                    
Query: 93   agatcttgctttggcatttgagctcccaggtggatggctgaaagaaaaagaatttg 148
            |||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||||||
Sbjct: 1608 agatgttgctttggcatttgaggtccctggtgggtggctcaaagaaaaagaatttg 1663
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>gb|AY108609.1| Zea mays PCO088346 mRNA sequence
          Length = 2030

 Score =  283 bits (143), Expect = 3e-73
 Identities = 305/359 (84%)
 Strand = Plus / Plus

                                                                        
Query: 76   gcagattcatcgaacacagatcttgctttggcatttgagctcccaggtggatggctgaaa 135
            ||||||||||||||||||||  |||| |||||||| ||| ||||| |||| ||||| |||
Sbjct: 1051 gcagattcatcgaacacagacgttgcattggcattcgaggtcccaagtggttggctcaaa 1110

                                                                        
Query: 136  gaaaaagaatttgctactgcatctgttcttcaggcacttctgggtggtggtggtgtgttt 195
            |||||||| |  |  |||| ||| |||||||||||||||||||||||||||||   ||||
Sbjct: 1111 gaaaaagattgcgtcactgtatcagttcttcaggcacttctgggtggtggtggcaagttt 1170

                                                                        
Query: 196  acctggggaagacctggaaaaggcttgcattcacgcctgaaccccctcgtaaatgaattt 255
             | |||||||| |  ||||| || || |||||||| || || | ||||||||||||||||
Sbjct: 1171 tcttggggaaggcaaggaaaggggttacattcacgtctaaaacgcctcgtaaatgaattt 1230

                                                                        
Query: 256  gacgaaatcaagtcgatctccgctttcaaaaatgttcacagtaacaccggcatttttgga 315
            ||  | |||||||| ||||| ||||||||  ||||||||||||| || ||||| ||||||
Sbjct: 1231 gatcagatcaagtcaatctctgctttcaaggatgttcacagtaatactggcatctttgga 1290

                                                                        
Query: 316  attcatgcatcgactgatgcagcatttgttcctaaagttattgacttggcagccagagaa 375
            || ||| |||| ||||||||| ||||||||||||||| ||||||| | ||||||||||| 
Sbjct: 1291 atccatacatctactgatgcatcatttgttcctaaagctattgacctagcagccagagag 1350

                                                                       
Query: 376  ctcacttccctcgcgacccctggtcaagttgaccaaacccaactggaccgtgctaaagc 434
            ||||||||||| || || ||||| ||||||||||||| |||||||||||| ||||||||
Sbjct: 1351 ctcacttcccttgcaactcctggacaagttgaccaaagccaactggaccgcgctaaagc 1409



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                        
Query: 464  tggaatcaaaggcatcaacaactgaagacatggggcgccaagcattggcatttggtgaaa 523
            |||||||| |||||||   ||| || ||||||||||||||||  ||||||||||||||||
Sbjct: 1439 tggaatcacaggcatcgctaacagaggacatggggcgccaagttttggcatttggtgaaa 1498

                                                
Query: 524  ggaaacctgtggagcagcttctaaaggctgttgatg 559
            |||||||||  ||||| ||||| |||||||| ||||
Sbjct: 1499 ggaaacctgctgagcaccttctcaaggctgtagatg 1534
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                           
Query: 87      gaacacagatcttgctttggcatttgagctcccaggtggatggctgaaagaaaaagaatt 146
               |||||||||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||||
Sbjct: 4892923 gaacacagatgttgctttggcatttgaggtccctggtgggtggctcaaagaaaaagaatt 4892982

                                      
Query: 147     tgctactgcatctgttcttcagg 169
               ||  || | ||| ||||||||||
Sbjct: 4892983 tgtaacagtatcagttcttcagg 4893005



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                           
Query: 402     agttgaccaaacccaactggaccgtgctaaagcatctgcaaaatcagttatcttgaggaa 461
               |||||||||||| ||||| ||||||||||||||  | || |||||||  ||||||| |||
Sbjct: 4894175 agttgaccaaactcaacttgaccgtgctaaagcgacagctaaatcagcaatcttgatgaa 4894234

                             
Query: 462     cctggaatcaaagg 475
               ||||||||||||||
Sbjct: 4894235 cctggaatcaaagg 4894248



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                      
Query: 277     gctttcaaaaatgttcacagtaacaccggcatttttggaattcatgcatcgactg 331
               ||||||||  |||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 4893698 gctttcaaggatgttcacagtaacactggcatttttggaattcatacatctactg 4893752



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                    
Query: 331     gatgcagcatttgttcctaaagttattgacttggcagccagagaactcacttc 383
               ||||||||||| |||||||| | ||||||||||||| ||||||| ||||||||
Sbjct: 4894027 gatgcagcattcgttcctaaggctattgacttggcaaccagagagctcacttc 4894079



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 473     aggcatcaacaactgaagacatggggcgccaagcattggcatttggtgaaagg 525
               |||||||| |||||||||||||||| || |||  |||||| ||||||||||||
Sbjct: 4894323 aggcatcagcaactgaagacatgggacggcaaatattggcctttggtgaaagg 4894375



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 523     aggaaacctgtggagcagcttctaaaggctgttgatg 559
               ||||||||||| ||||| ||||| |||||||||||||
Sbjct: 4895261 aggaaacctgttgagcaccttctcaaggctgttgatg 4895297



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 197     cctggggaagacctggaaaaggcttgcattca 228
               |||||||||| | |||||||||||||||||||
Sbjct: 4893133 cctggggaaggcatggaaaaggcttgcattca 4893164



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 33      aaagccaaaatctgtctatgttggtggagaatataga 69
               ||||||||| |||  |||||||||||| |||||||||
Sbjct: 4892787 aaagccaaagtctacctatgttggtggggaatataga 4892823
to top
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710E05
          Length = 179714

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                          
Query: 87     gaacacagatcttgctttggcatttgagctcccaggtggatggctgaaagaaaaagaatt 146
              |||||||||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||||
Sbjct: 137572 gaacacagatgttgctttggcatttgaggtccctggtgggtggctcaaagaaaaagaatt 137631

                                     
Query: 147    tgctactgcatctgttcttcagg 169
              ||  || | ||| ||||||||||
Sbjct: 137632 tgtaacagtatcagttcttcagg 137654



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                          
Query: 402    agttgaccaaacccaactggaccgtgctaaagcatctgcaaaatcagttatcttgaggaa 461
              |||||||||||| ||||| ||||||||||||||  | || |||||||  ||||||| |||
Sbjct: 138824 agttgaccaaactcaacttgaccgtgctaaagcgacagctaaatcagcaatcttgatgaa 138883

                            
Query: 462    cctggaatcaaagg 475
              ||||||||||||||
Sbjct: 138884 cctggaatcaaagg 138897



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                     
Query: 277    gctttcaaaaatgttcacagtaacaccggcatttttggaattcatgcatcgactg 331
              ||||||||  |||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 138347 gctttcaaggatgttcacagtaacactggcatttttggaattcatacatctactg 138401



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                   
Query: 331    gatgcagcatttgttcctaaagttattgacttggcagccagagaactcacttc 383
              ||||||||||| |||||||| | ||||||||||||| ||||||| ||||||||
Sbjct: 138676 gatgcagcattcgttcctaaggctattgacttggcaaccagagagctcacttc 138728



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                   
Query: 473    aggcatcaacaactgaagacatggggcgccaagcattggcatttggtgaaagg 525
              |||||||| |||||||||||||||| || |||  |||||| ||||||||||||
Sbjct: 138972 aggcatcagcaactgaagacatgggacggcaaatattggcctttggtgaaagg 139024



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 523    aggaaacctgtggagcagcttctaaaggctgttgatg 559
              ||||||||||| ||||| ||||| |||||||||||||
Sbjct: 139910 aggaaacctgttgagcaccttctcaaggctgttgatg 139946



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 197    cctggggaagacctggaaaaggcttgcattca 228
              |||||||||| | |||||||||||||||||||
Sbjct: 137782 cctggggaaggcatggaaaaggcttgcattca 137813



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 33     aaagccaaaatctgtctatgttggtggagaatataga 69
              ||||||||| |||  |||||||||||| |||||||||
Sbjct: 137436 aaagccaaagtctacctatgttggtggggaatataga 137472
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>gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete sequence
          Length = 96063

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 451  atcttgaggaacctggaatcaaa 473
            |||||||||||||||||||||||
Sbjct: 9689 atcttgaggaacctggaatcaaa 9711
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>gb|AC110209.11| Mus musculus chromosome 12, clone RP23-279O18, complete sequence
          Length = 177587

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 554   ttgatgctataactctggcag 574
             |||||||||||||||||||||
Sbjct: 20614 ttgatgctataactctggcag 20594
to top
>ref|XM_844275.1| PREDICTED: Canis familiaris hypothetical protein LOC607552
           (LOC607552), mRNA
          Length = 879

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 451 atcttgaggaacctggaatca 471
           |||||||||||||||||||||
Sbjct: 223 atcttgaggaacctggaatca 243
to top
>gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosome 5, complete sequence
          Length = 159693

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 360   cttggcagccagagaactcacttcc 384
             ||||||||||||||| |||||||||
Sbjct: 48240 cttggcagccagagagctcacttcc 48264
to top
>gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, complete sequence
          Length = 184206

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 178    ggtggtggtggtgtgtttacc 198
              |||||||||||||||||||||
Sbjct: 106119 ggtggtggtggtgtgtttacc 106139
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>ref|XM_737283.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000701.00.0)
            partial mRNA
          Length = 2424

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 31   gtaaagccaaaatctgtctat 51
            |||||||||||||||||||||
Sbjct: 2128 gtaaagccaaaatctgtctat 2148
to top
>emb|AL022144.1|HS35C21 Human DNA sequence from clone RP1-35C21 on chromosome 1q23-24, complete
             sequence
          Length = 91017

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 526   aaacctgtggagcagcttcta 546
             |||||||||||||||||||||
Sbjct: 64182 aaacctgtggagcagcttcta 64202
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>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     atcttgctttggcatttgagc 115
              |||||||||||||||||||||
Sbjct: 695223 atcttgctttggcatttgagc 695203
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>gb|AY052369.1| Homo sapiens PP2A B56 gamma gene, complete cds, alternative splice
             products
          Length = 121028

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 99    tgctttggcatttgagctcccaggt 123
             |||||||||||||| ||||||||||
Sbjct: 92873 tgctttggcatttgggctcccaggt 92849
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>gb|AC104109.3| Homo sapiens chromosome 5 clone CTD-2410N18, complete sequence
          Length = 164072

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 350   aagttattgacttggcagcca 370
             |||||||||||||||||||||
Sbjct: 47506 aagttattgacttggcagcca 47486
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>gb|AC021086.4|AC021086 Homo sapiens chromosome 5 clone CTD-2001C12, complete sequence
          Length = 137063

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   tgcatctgttcttcaggcact 173
             |||||||||||||||||||||
Sbjct: 41256 tgcatctgttcttcaggcact 41236
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>gb|AC010382.4|AC010382 Homo sapiens chromosome 5 clone CTD-2068C11, complete sequence
          Length = 151365

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   tgcatctgttcttcaggcact 173
             |||||||||||||||||||||
Sbjct: 74863 tgcatctgttcttcaggcact 74843
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>dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15, map 22, complete
             sequences
          Length = 164711

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   tccgctttcaaaaatgttcac 294
             |||||||||||||||||||||
Sbjct: 62090 tccgctttcaaaaatgttcac 62070
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>emb|BX469897.6| Zebrafish DNA sequence from clone CH211-39F22 in linkage group 4,
             complete sequence
          Length = 186500

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 502   caagcattggcatttggtgaa 522
             |||||||||||||||||||||
Sbjct: 35685 caagcattggcatttggtgaa 35705
to top
>emb|AL118558.6|CNS01DRV Human chromosome 14 DNA sequence BAC R-1017G21 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194871

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 99    tgctttggcatttgagctcccaggt 123
             |||||||||||||| ||||||||||
Sbjct: 28101 tgctttggcatttgggctcccaggt 28077
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>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   tccgctttcaaaaatgttcac 294
             |||||||||||||||||||||
Sbjct: 62189 tccgctttcaaaaatgttcac 62169
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>emb|CT009504.11| Mouse DNA sequence from clone RP23-149M9 on chromosome 12, complete
            sequence
          Length = 190345

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 554  ttgatgctataactctggcag 574
            |||||||||||||||||||||
Sbjct: 2914 ttgatgctataactctggcag 2934
to top
>gb|AC110037.13| Mus musculus chromosome 5, clone RP23-257E17, complete sequence
          Length = 177428

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 360   cttggcagccagagaactcacttcc 384
             ||||||||||||||| |||||||||
Sbjct: 40463 cttggcagccagagagctcacttcc 40439
to top
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 429     taaagcatctgcaaaatcagttatc 453
               |||||||||||| ||||||||||||
Sbjct: 3318118 taaagcatctgcgaaatcagttatc 3318142
to top
>dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1648B8, APP-D21S292
             region, complete sequence
          Length = 186930

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   tccgctttcaaaaatgttcac 294
             |||||||||||||||||||||
Sbjct: 89976 tccgctttcaaaaatgttcac 89956
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>gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome 12, complete sequence
          Length = 179330

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   tcaagttgaccaaacccaac 418
             ||||||||||||||||||||
Sbjct: 93789 tcaagttgaccaaacccaac 93770
to top
>emb|Z83104.1|CEF09B12 Caenorhabditis elegans Cosmid F09B12, complete sequence
          Length = 28278

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 173  ttctgggtggtggtggtgtg 192
            ||||||||||||||||||||
Sbjct: 3012 ttctgggtggtggtggtgtg 2993
to top
>gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosome 14, complete sequence
          Length = 189556

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    cctggggaagacctggaaaa 216
              ||||||||||||||||||||
Sbjct: 169122 cctggggaagacctggaaaa 169141
to top
>gb|AC122496.2| Mus musculus BAC clone RP24-400K16 from 5, complete sequence
          Length = 180081

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 350   aagttattgacttggcagccagag 373
             ||||||| ||||||||||||||||
Sbjct: 33167 aagttatagacttggcagccagag 33190
to top
>gb|AE004284.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 192
            of 251 of the complete chromosome
          Length = 10039

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 355  attgacttggcagccagaga 374
            ||||||||||||||||||||
Sbjct: 8592 attgacttggcagccagaga 8611
to top
>emb|AL731543.9| Human DNA sequence from clone RP11-318C4 on chromosome 10 Contains the
             gene for a novel protein and the 5' end of a deleted in
             malignant brain tumors 1 (DMBT1) pseudogene, complete
             sequence
          Length = 118510

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    agaatatagacgtgcagcag 79
             ||||||||||||||||||||
Sbjct: 97576 agaatatagacgtgcagcag 97595
to top
>gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, complete sequence
          Length = 175464

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tttcaaaaatgttcacagta 298
             ||||||||||||||||||||
Sbjct: 16269 tttcaaaaatgttcacagta 16288
to top
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    agaaaaagaatttgctactg 154
              ||||||||||||||||||||
Sbjct: 264678 agaaaaagaatttgctactg 264697
to top
>gb|AC165442.1| Mus musculus BAC clone RP23-164P21 from chromosome 10, complete sequence
          Length = 209583

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    gtcaagttgaccaaacccaa 417
              ||||||||||||||||||||
Sbjct: 183361 gtcaagttgaccaaacccaa 183380
to top
>ref|NG_005514.1| Homo sapiens deleted in malignant brain tumors 1 pseudogene (FLJ46361)
             on chromosome 10
          Length = 21450

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    agaatatagacgtgcagcag 79
             ||||||||||||||||||||
Sbjct: 13109 agaatatagacgtgcagcag 13128
to top
>gb|AC073587.6| Homo sapiens chromosome 10 clone RP11-572P18, complete sequence
          Length = 216523

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tttcaaaaatgttcacagta 298
             ||||||||||||||||||||
Sbjct: 42191 tttcaaaaatgttcacagta 42172
to top
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    agaaaaagaatttgctactg 154
              ||||||||||||||||||||
Sbjct: 287951 agaaaaagaatttgctactg 287970
to top
>gb|AC098477.2| Homo sapiens chromosome 3 clone RP11-733H11, complete sequence
          Length = 198468

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    acttctgggtggtggtggtg 190
              ||||||||||||||||||||
Sbjct: 176862 acttctgggtggtggtggtg 176843
to top
>gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, complete sequence
          Length = 216706

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    acttctgggtggtggtggtg 190
              ||||||||||||||||||||
Sbjct: 137392 acttctgggtggtggtggtg 137373
to top
>gb|AC092264.2| Homo sapiens chromosome 1 clone RP4-640P3, complete sequence
          Length = 113330

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tttcaaaaatgttcacagta 298
             ||||||||||||||||||||
Sbjct: 40360 tttcaaaaatgttcacagta 40379
to top
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    agaaaaagaatttgctactg 154
              ||||||||||||||||||||
Sbjct: 268912 agaaaaagaatttgctactg 268931
to top
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    agaaaaagaatttgctactg 154
              ||||||||||||||||||||
Sbjct: 235000 agaaaaagaatttgctactg 235019
to top
>emb|CR391569.1| Gallus gallus finished cDNA, clone ChEST804i17
          Length = 1079

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 172 cttctgggtggtggtggtgtgttt 195
           ||||| ||||||||||||||||||
Sbjct: 452 cttcttggtggtggtggtgtgttt 475
to top
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    agaaaaagaatttgctactg 154
              ||||||||||||||||||||
Sbjct: 289589 agaaaaagaatttgctactg 289608
to top
>ref|NM_078106.1| Caenorhabditis elegans F09B12.5 (F09B12.5) mRNA, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 ttctgggtggtggtggtgtg 192
           ||||||||||||||||||||
Sbjct: 932 ttctgggtggtggtggtgtg 913
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>ref|NM_001015794.1| Xenopus tropicalis MGC108402 protein (MGC108402), mRNA
          Length = 2671

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  ggcatttttggaattcatgc 323
            ||||||||||||||||||||
Sbjct: 2470 ggcatttttggaattcatgc 2451
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>gb|AC153937.11| Mus musculus 10 BAC RP24-458J4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 195695

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    ggtggtggtggtgtgtttac 197
              ||||||||||||||||||||
Sbjct: 165334 ggtggtggtggtgtgtttac 165315
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>gb|AF353165.1|AF353165 Toxoplasma gondii microneme protein 8 (MIC8) gene, complete cds
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 gttcttcaggcacttctggg 179
           ||||||||||||||||||||
Sbjct: 915 gttcttcaggcacttctggg 896
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>dbj|AB079243.1| Crassostrea gigas opp mRNA for PAR domain subfamily bZIP, complete
           cds
          Length = 1420

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  cacagatcttgctttggcat 109
           ||||||||||||||||||||
Sbjct: 505 cacagatcttgctttggcat 524
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>gb|BC089743.1| Xenopus tropicalis MGC108402 protein, mRNA (cDNA clone MGC:108402
            IMAGE:7024353), complete cds
          Length = 2671

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  ggcatttttggaattcatgc 323
            ||||||||||||||||||||
Sbjct: 2470 ggcatttttggaattcatgc 2451
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>gb|AC027663.14|AC027663 Homo sapiens chromosome 1 clone RP11-285I23, complete sequence
          Length = 170969

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tttcaaaaatgttcacagta 298
             ||||||||||||||||||||
Sbjct: 36508 tttcaaaaatgttcacagta 36527
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    agaaaaagaatttgctactg 154
              ||||||||||||||||||||
Sbjct: 265978 agaaaaagaatttgctactg 265997
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    agaaaaagaatttgctactg 154
              ||||||||||||||||||||
Sbjct: 287991 agaaaaagaatttgctactg 288010
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    agaaaaagaatttgctactg 154
              ||||||||||||||||||||
Sbjct: 232357 agaaaaagaatttgctactg 232376
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>gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, complete sequence
          Length = 206019

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    tgggtggtggtggtgtgttt 195
              ||||||||||||||||||||
Sbjct: 144203 tgggtggtggtggtgtgttt 144184
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>emb|AL607129.16| Mouse DNA sequence from clone RP23-120H2 on chromosome 4, complete
             sequence
          Length = 76465

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   ttcaggcacttctgggtggt 183
             ||||||||||||||||||||
Sbjct: 28160 ttcaggcacttctgggtggt 28141


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,671,193
Number of Sequences: 3902068
Number of extensions: 6671193
Number of successful extensions: 141287
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140807
Number of HSP's gapped (non-prelim): 479
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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