ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39m02 |
|---|---|
| Clone Library Name | barley_pub |
>PME2_CITSI (O04887) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 510 Score = 255 bits (651), Expect = 6e-68 Identities = 122/173 (70%), Positives = 147/173 (84%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RYVIYIKAG Y EN+EV KN+MF+GDG+GKT+I S +V G+TTF+SATVAVVG+N Sbjct: 230 RYVIYIKAGTYNENIEV--KLKNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDN 287 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 F+ARD+TI N AGP+ HQAVALR G+DLS FYRCSF GYQDTLYVHS RQF+RECDIYGT Sbjct: 288 FIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGT 347 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FGN+A VLQ+CN++AR+P PN++N TAQGRTDPNQ+TGI I C+V A Sbjct: 348 VDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTA 399
>PME1_CITSI (O04886) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 584 Score = 252 bits (643), Expect = 5e-67 Identities = 121/173 (69%), Positives = 141/173 (81%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RY+I IKAG Y ENVEV K HKN+MF+GDG +T+I S NVVDGSTTF+SAT AVVG Sbjct: 301 RYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEG 360 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 FLARD+T +N AGPSKHQAVALRVGADLSAFY C + YQDTLYVHS RQFF C I GT Sbjct: 361 FLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGT 420 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FGN+AAVLQ+C+++AR+P Q N+ TAQGRTDPNQNTGI IQK ++ A Sbjct: 421 VDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGA 473
>PME3_CITSI (P83948) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 584 Score = 251 bits (642), Expect = 7e-67 Identities = 121/173 (69%), Positives = 141/173 (81%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RY+I IKAG Y ENVEV K HKN+MF+GDG +T+I S NVVDGSTTF+SATVAVVG Sbjct: 301 RYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEG 360 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 FLARD+T +N AGPSKHQAVALRVGADLSAFY C + YQDTLYVHS RQFF C I GT Sbjct: 361 FLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGT 420 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FGN+AAVLQ+C+++AR+P Q N+ TAQGR DPNQNTGI IQK ++ A Sbjct: 421 VDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGA 473
>PME2_ARATH (Q42534) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 587 Score = 247 bits (630), Expect = 2e-65 Identities = 118/171 (69%), Positives = 137/171 (80%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 R+VI+IKAG Y ENVEV K N+MF+GDG GKT+I S NVVDGSTTF SATVA VG Sbjct: 304 RFVIHIKAGVYRENVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGER 363 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 FLARD+T +N AGPSKHQAVALRVG+D SAFY+C YQDTLYVHS RQFF +C I GT Sbjct: 364 FLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGT 423 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKV 522 +DF+FGN+AAVLQ C++ ARRP Q N+ TAQGR+DPNQNTGI IQ C++ Sbjct: 424 VDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRI 474
>PME_DAUCA (P83218) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)| Length = 319 Score = 239 bits (610), Expect = 3e-63 Identities = 117/173 (67%), Positives = 136/173 (78%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RYVI IKAG Y ENV+V K KN+MF+GDG T+I AS NV DGSTTF SATVA VG Sbjct: 36 RYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVGAG 95 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 FLARD+T +N AG +KHQAVALRVG+DLSAFYRC + YQD+LYVHS RQFF C I GT Sbjct: 96 FLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGT 155 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FGN+A VLQ C+++ARRP Q N+ TAQGRTDPNQNTGI IQK ++ A Sbjct: 156 VDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGA 208
>PMEU1_LYCES (Q43143) Pectinesterase U1 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 583 Score = 235 bits (599), Expect = 6e-62 Identities = 115/173 (66%), Positives = 132/173 (76%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RYVI IKAG Y ENV+V K N+MFMGDG T+I AS NV DGSTTF SATV V Sbjct: 300 RYVIRIKAGVYRENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSATVVRVAGK 359 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 LARD+T +N AG SKHQAVAL VG+DLSAFYRC + YQDTLYVHS RQFF +C + GT Sbjct: 360 VLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGT 419 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FGN AAV Q C+++ARRP Q N+ TAQGRTDPNQNTGI IQKC++ A Sbjct: 420 VDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGA 472
>PME_PRUPE (Q43062) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 522 Score = 225 bits (574), Expect = 5e-59 Identities = 106/173 (61%), Positives = 129/173 (74%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RYVIYIK G Y ENVE+ K NLM +GDGM T+I + + VDG TTFRSAT AV G Sbjct: 236 RYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSATFAVSGRG 295 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 F+ARD+T EN AGP KHQAVALR +DLS FYRC+ GYQDTLY H++RQF+R+C I GT Sbjct: 296 FIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGT 355 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FG++ V Q+C + A++ LPNQ N TAQGR DPN+ TGISIQ C + A Sbjct: 356 VDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITA 408
>PME1_LYCES (P14280) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase 1) (PE 1) Length = 546 Score = 221 bits (562), Expect = 1e-57 Identities = 108/173 (62%), Positives = 126/173 (72%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RYVIY+K G Y ENVEV N NLM +GDGM T I SLNVVDGSTTFRSAT+A VG Sbjct: 261 RYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAVGQG 320 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 F+ +D+ I+N AGP+K QAVALRVGAD+S RC YQDTLY HS RQF+R+ + GT Sbjct: 321 FILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGT 380 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FGN+A V Q C L AR+P Q N+ TAQGRTDPNQ TG SIQ C + A Sbjct: 381 VDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIA 433
>PME21_LYCES (P09607) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 550 Score = 219 bits (559), Expect = 3e-57 Identities = 108/173 (62%), Positives = 125/173 (72%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RYVIY+K G Y ENVEV NLM +GDGM T+I SLNVVDGSTTF SAT+A VG Sbjct: 265 RYVIYVKRGTYKENVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKG 324 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 F+ +D+ I+N AGP+KHQAVALRVGAD S RC YQDTLY HS RQF+R+ + GT Sbjct: 325 FILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGT 384 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 IDF+FGN+A V Q C L AR+P Q N+ TAQGRTDPNQ TG SIQ C + A Sbjct: 385 IDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIA 437
>PME22_LYCES (Q96575) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 550 Score = 216 bits (551), Expect = 2e-56 Identities = 106/173 (61%), Positives = 124/173 (71%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RYVIY+K G Y ENVEV LM +GDGM T+I +LNVVDGSTTF SAT+A VG Sbjct: 265 RYVIYVKRGIYKENVEVSSRKMKLMIVGDGMHATIITGNLNVVDGSTTFHSATLAAVGKG 324 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 F+ +D+ I+N AGP+KHQAVALRVGAD S RC YQDTLY HS RQF+R+ + GT Sbjct: 325 FILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGT 384 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 IDF+FGN+A V Q C L AR+P Q N+ TAQGRTDPNQ TG SIQ C + A Sbjct: 385 IDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIA 437
>PME3_PHAVU (Q43111) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 581 Score = 213 bits (543), Expect = 2e-55 Identities = 100/171 (58%), Positives = 126/171 (73%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 R+ +Y+K G Y+EN+++ KN N+M GDG KT + S N +DG+ TF +AT AV G Sbjct: 301 RFSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKG 360 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 F+A+D+ N AG SKHQAVALR G+D S F+RCSF G+QDTLY HS RQF+R+CDI GT Sbjct: 361 FIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGT 420 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKV 522 IDF+FGN+A V QSC + R+PLPNQ N TAQG+ DPNQNTGI IQK + Sbjct: 421 IDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTI 471
>PME1_ARATH (Q43867) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase 1) (PE 1) Length = 586 Score = 209 bits (532), Expect = 4e-54 Identities = 94/172 (54%), Positives = 129/172 (75%) Frame = +1 Query: 13 YVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNF 192 +VIY+K+G Y+ENV + K+ N+M GDG GKT+I S N VDG+ T+ +AT A+ G F Sbjct: 309 FVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGF 368 Query: 193 LARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGTI 372 + +D+ I N AG +KHQAVA R G+D S +Y+CSF G+QDTLY HS RQF+R+CD+ GTI Sbjct: 369 IMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTI 428 Query: 373 DFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 DF+FG++A V Q C + R+PL NQ N TAQG+ DPNQ++G+SIQ+C ++A Sbjct: 429 DFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISA 480
>PME1_FICAW (P83947) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 545 Score = 207 bits (528), Expect = 1e-53 Identities = 97/173 (56%), Positives = 126/173 (72%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 R ++ ++ G Y ENV+ G KN+M +G+GM T+I S NVVDGSTTF SATVA VG+ Sbjct: 260 RVIVLVRTGIYEENVDFGYQKKNVMLVGEGMDYTIITGSRNVVDGSTTFDSATVAAVGDG 319 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 F+A+D+ +N AGP K+QAVALR+GAD + RC YQDTLY H+ RQF+R+ +I GT Sbjct: 320 FIAQDICFQNTAGPEKYQAVALRIGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGT 379 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FGN+A V Q+CNL R+ + Q N TAQGRTDPNQNTG SIQ C++ A Sbjct: 380 VDFIFGNAAVVFQNCNLIPRKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFA 432
>PME3_LYCES (Q96576) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 544 Score = 207 bits (526), Expect = 2e-53 Identities = 103/173 (59%), Positives = 122/173 (70%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNN 189 RYVIY+K G Y ENV V K NLM +GDGM T+I SLNVVDGST F S T+A VG Sbjct: 260 RYVIYVKMGIYKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDGST-FPSNTLAAVGQG 318 Query: 190 FLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGT 369 F+ +D+ I+N AGP K QAVALRVGAD+S RC YQDTLY HS RQF+R+ + GT Sbjct: 319 FILQDICIQNTAGPEKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGT 378 Query: 370 IDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 +DF+FGN+A V Q C + AR+P Q N+ TAQGRTDPNQ TG SIQ C + A Sbjct: 379 VDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIA 431
>PME_PETIN (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 374 Score = 185 bits (470), Expect = 6e-47 Identities = 86/170 (50%), Positives = 119/170 (70%) Frame = +1 Query: 13 YVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNF 192 ++I+IKAG Y E +++ K+ N++ +G+G KT I + +V DG +TF + TV V G NF Sbjct: 87 FIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPSTFHTTTVGVNGANF 146 Query: 193 LARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGTI 372 +A+++ EN AGP K QAVALRV AD + Y C GYQDTLYVH+ RQF+R+C I GT+ Sbjct: 147 VAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTV 206 Query: 373 DFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKV 522 DF+FGN AVLQ+C + R+P NQS + TAQGRT+P Q I +Q C++ Sbjct: 207 DFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEI 256
>PME_MEDSA (Q42920) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) (P65) Length = 447 Score = 161 bits (408), Expect = 9e-40 Identities = 82/166 (49%), Positives = 100/166 (60%) Frame = +1 Query: 13 YVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNF 192 +VI++KAG Y E V V K + +GDG KT SLN DG T+ +AT V G NF Sbjct: 160 FVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANF 219 Query: 193 LARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIYGTI 372 +A+D+ EN AG KHQAVALRV AD + FY C G+QDTLYV S RQF+R+C I GTI Sbjct: 220 MAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTI 279 Query: 373 DFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQ 510 DFVFG V Q+C L R P Q + TA GR N + + Q Sbjct: 280 DFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQ 325
>PME4_ARATH (O80722) Pectinesterase-4 precursor (EC 3.1.1.11) (Pectin| methylesterase 4) (PE 4) (VANGUARD1-like protein 1) (VGD1-like protein 1) (AtPME4) Length = 588 Score = 142 bits (359), Expect = 4e-34 Identities = 76/174 (43%), Positives = 102/174 (58%), Gaps = 3/174 (1%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVV--DGSTTFRSATVAVVG 183 R +IYIKAG Y E V + K N+ GDG KTVI + +V G+TT SATV V Sbjct: 304 RCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVES 363 Query: 184 NNFLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIY 363 F+A+ + +N AGP HQA A+RV D + + C F GYQDTLYV++ RQF+R C + Sbjct: 364 EGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVS 423 Query: 364 GTIDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQG-RTDPNQNTGISIQKCKV 522 GT+DF+FG SA V+Q+ + R+ Q N TA G GI +Q C++ Sbjct: 424 GTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRI 477
>PMEL_ARATH (Q5MFV6) Probable pectinesterase VGDH2 precursor (EC 3.1.1.11)| (Pectin methylesterase) (PE) (VANGUARD1-like protein 2) (VGD1-like protein 2) Length = 588 Score = 140 bits (352), Expect = 3e-33 Identities = 74/174 (42%), Positives = 102/174 (58%), Gaps = 3/174 (1%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIK--ASLNVVDGSTTFRSATVAVVG 183 R +I+IKAG Y E V + K N+ GDG +T+I S+ + G+TT S TV V Sbjct: 304 RCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVES 363 Query: 184 NNFLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIY 363 F+A+ + +N AGP HQAVALRV D + + C F GYQDTLYV++ RQF+R + Sbjct: 364 EGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVS 423 Query: 364 GTIDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQG-RTDPNQNTGISIQKCKV 522 GT+DF+FG SA V+Q+ + R+ P QSN TA G GI + C++ Sbjct: 424 GTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRI 477
>PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 584 Score = 139 bits (350), Expect = 5e-33 Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 3/176 (1%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIK--ASLNVVDGSTTFRSATVAVVG 183 R +IYIKAG Y E V + K N+ GDG +T+I S+ + G+TT S TV V Sbjct: 300 RCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVES 359 Query: 184 NNFLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIY 363 F+A+ + +N AGP HQAVA RV D + + C F GYQDTLYV++ RQF+R + Sbjct: 360 EGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVS 419 Query: 364 GTIDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQ-NTGISIQKCKVAA 528 GT+DF+FG SA V+Q+ + R+ P Q+N TA G GI + C++ A Sbjct: 420 GTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMA 475
>PME5_ARATH (Q5MFV8) Pectinesterase-5 precursor (EC 3.1.1.11) (Pectin| methylesterase 5) (PE 5) (VANGUARD 1 protein) Length = 595 Score = 137 bits (344), Expect = 2e-32 Identities = 74/174 (42%), Positives = 101/174 (58%), Gaps = 3/174 (1%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIK--ASLNVVDGSTTFRSATVAVVG 183 R +I+IKAG Y E V + K N+ GDG KTVI S+ + G+TT S TV V Sbjct: 311 RCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVES 370 Query: 184 NNFLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIY 363 F+A+ + +N AGP HQAVA+RV D + + C F GYQDTLYV++ RQF+R + Sbjct: 371 EGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVS 430 Query: 364 GTIDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDP-NQNTGISIQKCKV 522 GT+DF+FG SA V+Q+ + R+ Q N TA G GI +Q C++ Sbjct: 431 GTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRI 484
>PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)| (Fragment) Length = 571 Score = 134 bits (336), Expect = 2e-31 Identities = 72/176 (40%), Positives = 102/176 (57%), Gaps = 3/176 (1%) Frame = +1 Query: 10 RYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIK--ASLNVVDGSTTFRSATVAVVG 183 R +IYIKAG Y E V + K N+ GDG +T+I S+ + G+TT S TV V Sbjct: 287 RCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVES 346 Query: 184 NNFLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECDIY 363 F+A+ + +N AGP +QAVA RV D + + C F GYQDTLYV++ RQF+R + Sbjct: 347 EGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVS 406 Query: 364 GTIDFVFGNSAAVLQSCNLYARRPLPNQSNIYTAQGRTDPNQ-NTGISIQKCKVAA 528 GT+DF+ G SA V+Q+ + R+ P Q+N TA G+ GI + C++ A Sbjct: 407 GTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMA 462
>PMEA_ERWCH (P0C1A8) Pectinesterase A precursor (EC 3.1.1.11) (Pectin| methylesterase A) (PE A) Length = 366 Score = 89.0 bits (219), Expect = 7e-18 Identities = 70/195 (35%), Positives = 96/195 (49%), Gaps = 25/195 (12%) Frame = +1 Query: 13 YVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNV----VDGST--TFRSATVA 174 +VI IK G Y E + + +N NL+ G+ VI A+ DGS T S+T+ Sbjct: 59 FVILIKNGVYNERLTITRN--NLLLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTIT 116 Query: 175 VVGNNFLARDLTIEN----AAGPSKH----------QAVALRV--GADLSAFYRCSFVGY 306 + +F A+ LTI N A +K QAVAL V D + F S VGY Sbjct: 117 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGY 176 Query: 307 QDTLYVHSLRQFFRECDIYGTIDFVFGNSAAVLQSCNLYAR-RPLPNQSNI--YTAQGRT 477 QDTLYV R FF +C I GT+DF+FG+ A+ +C+L +R R N+ Y T Sbjct: 177 QDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPST 236 Query: 478 DPNQNTGISIQKCKV 522 + NQ G+ I +V Sbjct: 237 NINQKYGLVITNSRV 251
>PMEA_DICD3 (P0C1A9) Pectinesterase A precursor (EC 3.1.1.11) (Pectin| methylesterase A) (PE A) Length = 366 Score = 87.4 bits (215), Expect = 2e-17 Identities = 70/195 (35%), Positives = 95/195 (48%), Gaps = 25/195 (12%) Frame = +1 Query: 13 YVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNV----VDGST--TFRSATVA 174 +VI IK G Y E + + +N NL G+ VI A+ DGS T S+T+ Sbjct: 59 FVILIKNGVYNERLTITRN--NLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTIT 116 Query: 175 VVGNNFLARDLTIEN----AAGPSKH----------QAVALRV--GADLSAFYRCSFVGY 306 + +F A+ LTI N A +K QAVAL V D + F S VGY Sbjct: 117 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGY 176 Query: 307 QDTLYVHSLRQFFRECDIYGTIDFVFGNSAAVLQSCNLYAR-RPLPNQSNI--YTAQGRT 477 QDTLYV R FF +C I GT+DF+FG+ A+ +C+L +R R N+ Y T Sbjct: 177 QDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPST 236 Query: 478 DPNQNTGISIQKCKV 522 + NQ G+ I +V Sbjct: 237 NINQKYGLVITNSRV 251
>PME_ASPTU (P17872) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 331 Score = 68.2 bits (165), Expect = 1e-11 Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 8/178 (4%) Frame = +1 Query: 19 IYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASL-------NVVDGSTTFRSATVAV 177 I+I+ G+Y E V + L+ G T ++L + D +AT+ Sbjct: 57 IFIEEGSYDEQVYIPALSGKLIVYGQTEDTTTYTSNLVNITHAIALADVDNDDETATLRN 116 Query: 178 VGNNFLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHSLRQFFRECD 357 +L I N G + HQA+A+ A +Y C F GYQDTL + Q + Sbjct: 117 YAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTY 176 Query: 358 IYGTIDFVFGNSA-AVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNTGISIQKCKVAA 528 I G +DF+FG A A C++ P+ ++I TA GR+ + ++ I K VAA Sbjct: 177 IEGAVDFIFGQHARAWFHECDIRVLEG-PSSASI-TANGRSSESDDSYYVIHKSTVAA 232
>PME_ASPAC (Q12535) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 331 Score = 65.9 bits (159), Expect = 7e-11 Identities = 47/131 (35%), Positives = 64/131 (48%), Gaps = 1/131 (0%) Frame = +1 Query: 139 DGSTTFRSATVAVVGNNFLARDLTIENAAGPSKHQAVALRVGADLSAFYRCSFVGYQDTL 318 D + TFR+ V N L I N G + HQA+AL AD +Y C+F GYQDTL Sbjct: 110 DLTATFRNKAVGSQVYN-----LNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTL 164 Query: 319 YVHSLRQFFRECDIYGTIDFVFGNSA-AVLQSCNLYARRPLPNQSNIYTAQGRTDPNQNT 495 + Q + I G +DF+FG A A Q+ ++ P ++I TA GR+ + Sbjct: 165 LAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVEG-PTSASI-TANGRSSETDTS 222 Query: 496 GISIQKCKVAA 528 I K VAA Sbjct: 223 YYVINKSTVAA 233
>PME2_RALSO (P24791) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 396 Score = 61.6 bits (148), Expect = 1e-09 Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 12/128 (9%) Frame = +1 Query: 151 TFRSATVAVVGNNFLARDLTIENAA-----GPSKHQAVALRVGADLSAFYRCSFVGYQDT 315 T RSAT V +NF AR+LT +N+ + AVAL V D + S +G QDT Sbjct: 174 TVRSATAMVRASNFNARNLTFKNSYVEGTFADNNQSAVALAVRGDKAILENVSVIGNQDT 233 Query: 316 LYVHS------LRQFFRECDIYGTIDFVFGNSAAVLQSCNL-YARRPLPNQSNIYTAQGR 474 LY+ + +R +F+ I G DF+FG AV C + Y L ++ Y Sbjct: 234 LYLGATNNTMVIRAYFKNSFIQGDTDFIFGAGTAVFHGCTIQYTAARLGARATSYVFAPS 293 Query: 475 TDPNQNTG 498 T P+ G Sbjct: 294 TAPDNPHG 301
>PME1_RALSO (P58601) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 396 Score = 58.5 bits (140), Expect = 1e-08 Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 12/178 (6%) Frame = +1 Query: 1 PXXRYVIYIKAGAYMENVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVV 180 P Y + AG N ++ N+ N + S N G T RSAT V Sbjct: 130 PITLYGLDANAG----NTQIVYNNANPTPASGAKTNPCMGTSSNATVG--TLRSATAMVR 183 Query: 181 GNNFLARDLTIENAA-----GPSKHQAVALRVGADLSAFYRCSFVGYQDTLYVHS----- 330 ++F AR+LT +N+ + AVAL V D + S +G QDTL+V + Sbjct: 184 ASDFHARNLTFKNSYVEGTYADNNQSAVALAVRGDKAILENVSVIGNQDTLFVGATSTTT 243 Query: 331 -LRQFFRECDIYGTIDFVFGNSAAVLQSCNL-YARRPLPNQSNIYTAQGRTDPNQNTG 498 +R +F+ I G DF+FG AV C + Y L ++ Y T P G Sbjct: 244 VIRAYFKNSFIQGDTDFIFGAGTAVFHGCTIQYTAARLGAKAASYIFAPSTAPGNPYG 301
>PMEB_DICD3 (Q47474) Pectinesterase B precursor (EC 3.1.1.11) (Pectin| methylesterase B) (PE B) Length = 433 Score = 43.1 bits (100), Expect = 5e-04 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 16/97 (16%) Frame = +1 Query: 160 SATVAVVGNNFLARDLTIENA----AGPSKHQAVALRVGADLSAFYRCSFVGYQDTLYV- 324 SA + N+F ++LT+ NA HQAVALR + A +C DT +V Sbjct: 205 SAVMWSQSNDFQLKNLTVVNALLDTVDSGTHQAVALRTDGESGATGKCPPAQPSDTFFVN 264 Query: 325 -----------HSLRQFFRECDIYGTIDFVFGNSAAV 402 H R + ++ I G +D+VFG + AV Sbjct: 265 TSDRQNSYVTDHYSRAYIKDSYIEGDVDYVFGRATAV 301
>NU1M_HYLLA (Q96126) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 33.1 bits (74), Expect = 0.48 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 5/69 (7%) Frame = -2 Query: 227 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFF 63 P A +M L P+T+T A ++ P+ L +AL+ T LP+P+P +N+ L+ Sbjct: 48 PFADAMKLFTKEPLKPSTSTTA-LYIIAPTLALTIALLLWTPLPMPNPLINLNLGLLFIL 106 Query: 62 PTSTFSMYA 36 TS+ ++Y+ Sbjct: 107 ATSSLTVYS 115
>NU1M_LEMCA (O78696) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 32.7 bits (73), Expect = 0.63 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%) Frame = -2 Query: 227 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALITVLPIPSP-----MNMRFLWFF 63 P A +M L P T++ + + P+ L +AL+T +P+P P MNM L+ Sbjct: 48 PFADAMKLFIKEPLRPLTSS-SSLYTIAPTLALTIALVTWIPLPLPYPLINMNMGLLFIL 106 Query: 62 PTSTFSMYA 36 TS+ ++Y+ Sbjct: 107 ATSSLAVYS 115
>NU1M_PONPP (P92718) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 5/56 (8%) Frame = -2 Query: 188 LLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFFPTSTFSMYA 36 L P+T+T+ +V P+ L +AL+ T LP+P+P +N+ L+ TS+ ++Y+ Sbjct: 61 LKPSTSTII-LYIVSPALALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYS 115
>NU1M_PANTR (Q9T9W3) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 5/69 (7%) Frame = -2 Query: 227 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFF 63 P A +M L P+T+T+ + P+ L +AL+ T LP+P+P +N+ L+ Sbjct: 48 PFADAMKLFTKEPLKPSTSTIT-LYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFIL 106 Query: 62 PTSTFSMYA 36 TS+ ++Y+ Sbjct: 107 ATSSLAVYS 115
>NU1M_GORGO (Q9T9Z0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 5/69 (7%) Frame = -2 Query: 227 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFF 63 P A +M L P+T+T+ + P+ L +AL+ T LP+P+P +N+ L+ Sbjct: 48 PFADAMKLFTKEPLKPSTSTIT-LYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFIL 106 Query: 62 PTSTFSMYA 36 TS+ ++Y+ Sbjct: 107 ATSSLAVYS 115
>VP33A_RAT (Q63615) Vacuolar protein sorting 33A (r-vps33a)| Length = 597 Score = 31.6 bits (70), Expect = 1.4 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = +1 Query: 274 SAFYRCSFVGYQDTLYVHSLRQFFRECDIYGTIDFVFGNSAAVLQSCNLYAR 429 SAF C G Q +LY H+ + +YGTI +FG Q N+ R Sbjct: 158 SAFKECYLEGDQTSLY-HAAKGLMTLQALYGTIPQIFGKGECARQVANMMVR 208
>NU1M_HUMAN (P03886) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 31.2 bits (69), Expect = 1.8 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Frame = -2 Query: 227 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFF 63 P A +M L P T+T+ + P+ L +AL+ T LP+P+P +N+ L+ Sbjct: 48 PFADAMKLFTKEPLKPATSTIT-LYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFIL 106 Query: 62 PTSTFSMYA 36 TS+ ++Y+ Sbjct: 107 ATSSLAVYS 115
>NU1M_RABIT (O79427) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%) Frame = -2 Query: 152 VVEPSTTLRLALITVLPIPSP-----MNMRFLWFFPTSTFSMYA 36 ++ P+ L LAL LPIP P +NM L+ TS+ ++Y+ Sbjct: 72 IIAPTLALTLALSMWLPIPMPYPLVNLNMGILFILATSSLAVYS 115
>NU1M_PONPY (Q9T9X9) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 5/56 (8%) Frame = -2 Query: 188 LLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFFPTSTFSMYA 36 L P+T+T +V P+ L +AL+ T LP+P+P +N+ L+ TS+ ++Y+ Sbjct: 61 LKPSTSTTI-LYIVSPALALTIALLLWTPLPMPNPLINLNLGLLFILATSSLTVYS 115
>NU1M_NYCNO (O80003) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) (Fragment) Length = 301 Score = 30.8 bits (68), Expect = 2.4 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 5/56 (8%) Frame = -2 Query: 188 LLPTTATVAERKVVEPSTTLRLALITVLPIPSP-----MNMRFLWFFPTSTFSMYA 36 L P T+++A ++ P+ L LAL+ +P+P P MN+ L+ S+ ++YA Sbjct: 55 LQPLTSSLA-LFIIAPTLALTLALMMWIPLPMPHPLINMNLSILFMLALSSLAVYA 109
>FLII_SALTY (P26465) Flagellum-specific ATP synthase (EC 3.6.3.14)| Length = 456 Score = 30.4 bits (67), Expect = 3.1 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%) Frame = +1 Query: 58 VGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAGP-S 234 VG+ + +F G G+GK+V+ L ++ T V ++G IEN GP Sbjct: 172 VGRGQRMGLFAGSGVGKSVL---LGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228 Query: 235 KHQAVALRVGADLSAFYRCSFVGY 306 + ++V + AD+S R Y Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAY 252
>VP33A_MOUSE (Q9D2N9) Vacuolar protein sorting 33A| Length = 598 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 277 AFYRCSFVGYQDTLYVHSLRQFFRECDIYGTIDFVFGNSAAVLQSCNLYAR 429 AF C G Q +LY H+ + +YGTI +FG Q N+ R Sbjct: 159 AFKECYLEGDQTSLY-HAAKGLMTLQALYGTIPQIFGKGECARQVANMMVR 208
>NU1M_NYCVE (Q8M881) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 5/44 (11%) Frame = -2 Query: 152 VVEPSTTLRLALITVLPIPSP-----MNMRFLWFFPTSTFSMYA 36 ++ P+ L LAL+ +P+P P MN+ L+ S+ ++YA Sbjct: 72 IIAPTLALTLALMMWIPLPMPHPLVNMNLSILFMLALSSLAVYA 115
>VP33A_HUMAN (Q96AX1) Vacuolar protein sorting 33A (hVPS33A)| Length = 596 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 277 AFYRCSFVGYQDTLYVHSLRQFFRECDIYGTIDFVFGNSAAVLQSCNLYAR 429 AF C G Q +LY H+ + +YGTI +FG Q N+ R Sbjct: 159 AFKECYLEGDQTSLY-HAAKGLMTLQALYGTIPQIFGKGECARQVANMMIR 208
>VG_DROME (Q26366) Protein vestigial| Length = 453 Score = 29.3 bits (64), Expect = 7.0 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 465 AGPDGPQPEHRHLHPKVQGGG 527 +GPD P+ H H HP GGG Sbjct: 211 SGPDSPRHAHSHSHPLHGGGG 231
>NU1M_MOUSE (P03888) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 29.3 bits (64), Expect = 7.0 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 5/44 (11%) Frame = -2 Query: 152 VVEPSTTLRLALITVLPIPSP-----MNMRFLWFFPTSTFSMYA 36 ++ P+ +L LAL +P+P P +N+ L+ TS+ S+Y+ Sbjct: 72 IIAPTLSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYS 115
>NORM_VIBF1 (Q5E4Y6) Multidrug resistance protein norM (Na(+)/drug antiporter)| (Multidrug-efflux transporter) Length = 460 Score = 28.9 bits (63), Expect = 9.1 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 10/69 (14%) Frame = +1 Query: 244 AVALRVGADLSAFYRCSFVGY----QDTLYVHSLRQFFRE-CDIYGTIDFVFG-----NS 393 A ALR D++A ++C+FV Y + YV + + RE +YG F FG + Sbjct: 374 AGALRGYKDMNAIFKCTFVSYWIVGLPSGYVLGMTDWIREPMGVYG---FWFGFIGGLTT 430 Query: 394 AAVLQSCNL 420 +A+L +C L Sbjct: 431 SAILLTCRL 439 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,001,733 Number of Sequences: 219361 Number of extensions: 803479 Number of successful extensions: 3252 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 3088 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3239 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
