ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39l20 |
|---|---|
| Clone Library Name | barley_pub |
>DEGP9_ARATH (Q9FL12) Protease Do-like 9 (EC 3.4.21.-)| Length = 592 Score = 339 bits (869), Expect = 5e-93 Identities = 166/201 (82%), Positives = 185/201 (92%) Frame = +1 Query: 4 IANDGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKG 183 IANDGTVPFRHGERIGFSYL+SQKYTG+ A VKVLR+ +I EFNIKL+IHK+LIPAHI G Sbjct: 387 IANDGTVPFRHGERIGFSYLISQKYTGDSALVKVLRNKEILEFNIKLAIHKRLIPAHISG 446 Query: 184 RPPSYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVL 363 +PPSY+IVAGFVF VSVPYLRSEYGK+YEFDAPVKLL+KHLHAMAQS DEQLVVVSQVL Sbjct: 447 KPPSYFIVAGFVFTTVSVPYLRSEYGKEYEFDAPVKLLEKHLHAMAQSVDEQLVVVSQVL 506 Query: 364 VADINIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVLETKTAR 543 V+DINIGYEEIVNTQV AFNGKPV NLK LA MVE+C E++KF++DYDQ+VVL+TKTA+ Sbjct: 507 VSDINIGYEEIVNTQVVAFNGKPVKNLKGLAGMVENCEDEYMKFNLDYDQIVVLDTKTAK 566 Query: 544 AATQDILTTHCIPSAMSDDLK 606 AT DILTTHCIPSAMSDDLK Sbjct: 567 EATLDILTTHCIPSAMSDDLK 587
>DGP10_ARATH (Q9FIV6) Protease Do-like 10, mitochondrial precursor (EC 3.4.21.-)| Length = 586 Score = 176 bits (445), Expect = 7e-44 Identities = 99/201 (49%), Positives = 131/201 (65%), Gaps = 1/201 (0%) Frame = +1 Query: 4 IANDGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKG 183 IANDGTVPFR+ ERI F +LVS K E A VKVLR K HEF+I L + L+P H Sbjct: 371 IANDGTVPFRNRERITFDHLVSMKKPDETALVKVLREGKEHEFSITLRPLQPLVPVHQFD 430 Query: 184 RPPSYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVL 363 + PSYYI AGFVF+ ++ PYL EYG+D+ +P L + L + + +QLV+VSQVL Sbjct: 431 QLPSYYIFAGFVFVPLTQPYLH-EYGEDWYNTSPRTLCHRALKDLPKKAGQQLVIVSQVL 489 Query: 364 VADINIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYD-QVVVLETKTA 540 + DIN GYE + QV NG VNNL+ L ++E+CN E L+ D+D + +V+VL ++A Sbjct: 490 MDDINTGYERLAELQVNKVNGVEVNNLRHLCQLIENCNTEKLRIDLDDESRVIVLNYQSA 549 Query: 541 RAATQDILTTHCIPSAMSDDL 603 + AT IL H I SA+S DL Sbjct: 550 KIATSLILKRHRIASAISSDL 570
>DEGP2_ARATH (O82261) Protease Do-like 2, chloroplast precursor (EC 3.4.21.-)| Length = 607 Score = 148 bits (374), Expect = 1e-35 Identities = 80/197 (40%), Positives = 121/197 (61%) Frame = +1 Query: 13 DGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKGRPP 192 +GTVPFR ERI F YL+SQK+ G+ A + ++R+ + + + L L+P HI G P Sbjct: 379 EGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQP 438 Query: 193 SYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVLVAD 372 SY IVAG VF +S P + E E +KLL K +++A+ EQ+V++SQVL + Sbjct: 439 SYIIVAGLVFTPLSEPLIEEEC----EDTIGLKLLTKARYSVARFRGEQIVILSQVLANE 494 Query: 373 INIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVLETKTARAAT 552 +NIGYE++ N QV FNG P+ N+ LA +++ C ++L F+ + + V VLE + + +A+ Sbjct: 495 VNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSAS 554 Query: 553 QDILTTHCIPSAMSDDL 603 IL + IPS S DL Sbjct: 555 LCILKDYGIPSERSADL 571
>DEGP3_ARATH (Q9SHZ1) Putative protease Do-like 3, mitochondrial precursor (EC| 3.4.21.-) Length = 559 Score = 134 bits (338), Expect = 2e-31 Identities = 79/201 (39%), Positives = 114/201 (56%) Frame = +1 Query: 4 IANDGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKG 183 I ND +V FR ERI F +LVS K E A +KVLR K +EFN L L+P Sbjct: 353 IGNDSSVHFRKKERITFKHLVSMKKPCETALLKVLREGKEYEFNSSLKSVPPLVPKRQYD 412 Query: 184 RPPSYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVL 363 + SYYI G VF+ ++ PY+ S + + L M + EQ+V++SQ+L Sbjct: 413 KSASYYIFGGLVFLPLTKPYIDSSC-----------VSESALGKMPKKAGEQVVIISQIL 461 Query: 364 VADINIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVLETKTAR 543 DIN GY + QV+ NG V+NLK L +VE+C E ++ D++ D+V+ L+ K+A+ Sbjct: 462 EDDINTGYSIFEDFQVKKVNGVQVHNLKHLYKLVEECCTETVRMDLEKDKVITLDYKSAK 521 Query: 544 AATQDILTTHCIPSAMSDDLK 606 T IL + IPSA+S+DL+ Sbjct: 522 KVTSKILKSLKIPSAVSEDLQ 542
>DEGP4_ARATH (Q9SHZ0) Putative protease Do-like 4, mitochondrial precursor (EC| 3.4.21.-) Length = 518 Score = 124 bits (311), Expect = 2e-28 Identities = 79/199 (39%), Positives = 105/199 (52%) Frame = +1 Query: 4 IANDGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKG 183 I ND V FR+ ERI F++ VS K E ++VLR K HEF+I + L+P H Sbjct: 331 IGNDAKVTFRNKERINFNHFVSMKKLDETVLLQVLRDGKEHEFHIMVKPVPPLVPGHQYD 390 Query: 184 RPPSYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVL 363 + PSYYI AGFVF+ ++ PY+ S + + + M + EQL VL Sbjct: 391 KLPSYYIFAGFVFVPLTQPYIDS-----------TLICNCAIKYMPEKAGEQL-----VL 434 Query: 364 VADINIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVLETKTAR 543 DIN GY + N +V NG V NLK L +VE C E L+ D++ ++VVVL A+ Sbjct: 435 ADDINAGYTDFKNLKVIKVNGVQVENLKHLTELVETCWTEDLRLDLENEKVVVLNYANAK 494 Query: 544 AATQDILTTHCIPSAMSDD 600 AT IL H IPSA D Sbjct: 495 EATSLILELHRIPSANEYD 513
>DGP11_ARATH (Q9LK71) Putative protease Do-like 11, mitochondrial precursor (EC| 3.4.21.-) Length = 565 Score = 117 bits (293), Expect = 3e-26 Identities = 77/205 (37%), Positives = 104/205 (50%), Gaps = 5/205 (2%) Frame = +1 Query: 4 IANDGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKG 183 I ND VPF++ RI FSYLVS K GEKA VKVLR+ K +E+NI L K Sbjct: 357 IGNDEKVPFQNKRRIDFSYLVSMKKPGEKALVKVLRNGKEYEYNISLKPVKPNFTVQQFY 416 Query: 184 RPPSYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVL 363 PSYYI GFVF+ ++ YL SE+ + V +S+ L Sbjct: 417 NVPSYYIFGGFVFVPLTKTYLDSEHHQ--------------------------VKISERL 450 Query: 364 VADINIGYEEIVNT-----QVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVLE 528 DIN GY+ + QV NG V NLK L ++E+C+ E L+ + +V+VL Sbjct: 451 ADDINEGYQSLYGAQLWWEQVEKVNGVEVKNLKHLCELIEECSTEDLRLEFKNHKVLVLN 510 Query: 529 TKTARAATQDILTTHCIPSAMSDDL 603 ++A+ AT IL H I S +S D+ Sbjct: 511 YESAKKATLQILERHKIKSVISKDI 535
>DGP12_ARATH (Q9LK70) Putative protease Do-like 12, mitochondrial precursor (EC| 3.4.21.-) Length = 499 Score = 114 bits (286), Expect = 2e-25 Identities = 72/199 (36%), Positives = 100/199 (50%) Frame = +1 Query: 4 IANDGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKG 183 +A DG RI F++ +S K E VKVLR K HE+NI L K I Sbjct: 321 LAIDGVPVLSEMRRISFNHFISMKKPDENILVKVLRKGKEHEYNISLKPVKPHIQVQQYY 380 Query: 184 RPPSYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVL 363 PSYYI GFVF+ ++ Y+ +Y K DEQ V++SQV+ Sbjct: 381 NLPSYYIFGGFVFVPLTKSYIDDKYYK--------------------ITDEQHVIISQVM 420 Query: 364 VADINIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVLETKTAR 543 DIN GY + QV NG V NLK L ++E C + L+ D++ D+V+VL ++A+ Sbjct: 421 PDDINKGYSNFKDLQVEKVNGVKVKNLKHLRELIEGCFSKDLRLDLENDKVMVLNYESAK 480 Query: 544 AATQDILTTHCIPSAMSDD 600 AT +IL H I SA + + Sbjct: 481 KATFEILERHNIKSAWASE 499
>DGP13_ARATH (Q9FM41) Putative protease Do-like 13 (EC 3.4.21.-)| Length = 486 Score = 113 bits (282), Expect = 5e-25 Identities = 77/208 (37%), Positives = 108/208 (51%) Frame = +1 Query: 4 IANDGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKG 183 I NDGTV + ER LVS K GE +K+LR K+HEFNI L ++L+PA Sbjct: 297 IENDGTVIIPNRERTRLDDLVSLKQLGETILLKILREGKMHEFNITLRPVQRLVPAGQID 356 Query: 184 RPPSYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVL 363 PSYYI AGFVF VP LR ++ K S EQ+VV+S+VL Sbjct: 357 NNPSYYIFAGFVF----VP-LRKQHFKG-------------------SNGEQIVVISEVL 392 Query: 364 VADINIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVLETKTAR 543 IN+ Y + +V + N V NLK L ++E C + L+ ++ +V++L+ + A+ Sbjct: 393 ADVINVEYYMYKHLKVNSVNKVKVENLKHLCELIEKCCTKDLRLELGDGRVIILDYQFAK 452 Query: 544 AATQDILTTHCIPSAMSDDLKA*VKARC 627 ++T IL H +P AMS DL C Sbjct: 453 SSTSLILERHRVPWAMSKDLMTDQSTTC 480
>SYV_BORPE (Q7VWK6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 960 Score = 30.8 bits (68), Expect = 3.5 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%) Frame = +2 Query: 296 WTSIYMQWRNHLMS-----SLWWSHR 358 WT+IY QW N++ LWW H+ Sbjct: 429 WTTIYNQWLNNIQDWCISRQLWWGHQ 454
>SYV_BORBR (Q7WHM6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 960 Score = 30.8 bits (68), Expect = 3.5 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 5/26 (19%) Frame = +2 Query: 296 WTSIYMQWRNHLMS-----SLWWSHR 358 WT+IY QW N++ LWW H+ Sbjct: 429 WTTIYNQWLNNIQDWCISRQLWWGHQ 454
>IF2_MYCPU (Q98R05) Translation initiation factor IF-2| Length = 603 Score = 30.4 bits (67), Expect = 4.5 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +1 Query: 400 NTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVLETK 534 N+++ FN KP N+KQ A ED N + FD+ Y V L K Sbjct: 458 NSEIIGFNSKPNPNIKQQA---EDLNIQINSFDVVYKIVDYLNEK 499
>SYV_BDEBA (Q6MQK8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 894 Score = 30.4 bits (67), Expect = 4.5 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 5/26 (19%) Frame = +2 Query: 296 WTSIYMQWRNH-----LMSSLWWSHR 358 WT +Y+ W N+ + LWW HR Sbjct: 390 WTKVYLHWLNNIEDWCISRQLWWGHR 415
>SYV_PELUB (Q4FM20) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 875 Score = 30.0 bits (66), Expect = 5.9 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Frame = +2 Query: 263 KITNLMPPSSCWTSIYMQWRNH-----LMSSLWWSHR 358 K TN P + W+ Y QW N+ + LWW H+ Sbjct: 375 KKTNFFPAN--WSKTYFQWMNNIEPWCISRQLWWGHQ 409
>SYV_BLOFL (Q7VQT2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 966 Score = 29.6 bits (65), Expect = 7.7 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 5/26 (19%) Frame = +2 Query: 296 WTSIYMQWRNHLMS-----SLWWSHR 358 +T+IY+QW N + +WW HR Sbjct: 421 YTNIYLQWMNEIQDWCISRQIWWGHR 446
>GPDA_ONYPE (P61745) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 329 Score = 29.6 bits (65), Expect = 7.7 Identities = 18/58 (31%), Positives = 29/58 (50%) Frame = +1 Query: 352 SQVLVADINIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCNKEFLKFDMDYDQVVVL 525 +QVL+ DIN+ Y E +N P+ N+K ++ LK +DY ++VL Sbjct: 24 NQVLLYDINLSYVEKINQGKHPIFNAPLVNVKAVSC---------LKQALDYSDLIVL 72
>Y4386_RHILO (Q98E66) Hypothetical UPF0187 protein mll4386| Length = 309 Score = 29.6 bits (65), Expect = 7.7 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +2 Query: 302 SIYMQWRNHLMSSLWWSHRCLWQISILVMKKLS 400 SIY+ +RN+ WW R LW + ++ L+ Sbjct: 73 SIYLSFRNNAAYDRWWEARKLWGTLVFEIRNLA 105
>FUSC_BURCE (P24128) Fusaric acid resistance protein fusC| Length = 346 Score = 29.6 bits (65), Expect = 7.7 Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 4/131 (3%) Frame = +1 Query: 55 SYLVSQKYTGEKARVKVLRSSKIHEFNIKLSIHKKLIPAHIKGRPPSYYIVAGF----VF 222 S LV +YTGE+ R V + + ++ +L AHI+ + V GF Sbjct: 21 SALVFPRYTGEQMRTTVRKRFGSFVDYVASALSGQLDRAHIETIHTRFAYVVGFEAARSM 80 Query: 223 MVVSVPYLRSEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVLVADINIGYEEIVN 402 V P R G+ ++ HA+ Q + +Q + I + EI Sbjct: 81 AVFEDPDTRMRSGRLARLNSEFMSASSRFHALHQLMNRLHAAGAQAAIDAIEPYFREIAP 140 Query: 403 TQVRAFNGKPV 435 R NG+PV Sbjct: 141 LLTR--NGEPV 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,874,579 Number of Sequences: 219361 Number of extensions: 1924910 Number of successful extensions: 5228 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 5068 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5217 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
