| Clone Name | bags39l20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK058600.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H07, full insert sequence Length = 1661 Score = 535 bits (270), Expect = e-149 Identities = 510/590 (86%) Strand = Plus / Plus Query: 7 gccaatgacggcacagttccattcaggcatggagagcgcattggcttcagttacctagtt 66 ||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 552 gccaatgacggtacagttcctttcagacatggggagcgtattggcttcagctacctcatt 611 Query: 67 tcacagaagtatactggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcat 126 || |||||||| ||||| |||||||| | ||||||| |||| |||| ||| ||| ||| | Sbjct: 612 tcgcagaagtacactggcgagaaggcccatgtcaaaattctgcggaattcgaaagttctt 671 Query: 127 gaattcaacataaagctatcaatccacaaaaagctcattccagctcatataaagggcagg 186 ||||| ||||| ||||| ||| ||||||| ||||||||||||||||||||||||||| Sbjct: 672 gaatttaacattaagctggcaactcacaaaagactcattccagctcatataaagggcagg 731 Query: 187 ccaccgtcatactacattgttgcaggctttgtttttatggtcgtatctgttccatatctt 246 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 732 ccaccatcatattacattgttgcaggcttcgtttttatggttgtttctgttccatatctc 791 Query: 247 cgatccgagtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcat 306 ||||| |||||||||||||| || || | ||||||||| |||||||||||||||||||| Sbjct: 792 cgatctgagtatggaaaagactatgagtatgatgcccctgtcaagttgttggacaagcac 851 Query: 307 ctacatgcaatggcgcaatcacctgatgagcagcttgtggtggtctcacaggtgcttgtg 366 ||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 852 ttacatgcaatggctcaatcacctgacgagcagcttgtggtggtgtcacaggttcttgta 911 Query: 367 gcagatatcaatattggttatgaagaaattgtcaatactcaggtgcgtgcgttcaatggg 426 ||||||||||| ||||||||||||||||||||||||| |||||| | | | |||||||| Sbjct: 912 gcagatatcaacattggttatgaagaaattgtcaatattcaggttctttctttcaatggc 971 Query: 427 aaaccagtaaataatttgaagcaactggcgacaatggtggaagattgcaacaaggagttc 486 ||||||||||| ||||| ||||| |||| || |||||||||||||| ||| |||| | | Sbjct: 972 aaaccagtaaaaaatttaaagcacttggcaaccatggtggaagattgtaacgaggaatac 1031 Query: 487 ttgaaatttgacatggattacgaccaggttgttgttctcgagacaaaaacagcaagggct 546 || |||||||| ||||| ||||| ||| | |||||||| ||| ||||||| ||||||||| Sbjct: 1032 ttaaaatttgatatggactacgatcagctggttgttcttgaggcaaaaacggcaagggct 1091 Query: 547 gcgactcaggacattctaacaacacactgcataccttcagcgatgtcaga 596 || |||||||| ||||| ||||| || || |||||||| || |||||||| Sbjct: 1092 gctactcaggatattctgacaacgcattgtataccttccgcaatgtcaga 1141
>dbj|AK120193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035P19, full insert sequence Length = 2499 Score = 527 bits (266), Expect = e-146 Identities = 509/590 (86%) Strand = Plus / Plus Query: 7 gccaatgacggcacagttccattcaggcatggagagcgcattggcttcagttacctagtt 66 ||||||||||| |||||||| ||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 1323 gccaatgacggtacagttcctttcagacatggggagcgtattggcttcagctacctcatt 1382 Query: 67 tcacagaagtatactggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcat 126 || |||||||| ||||| |||||||| | ||||||| |||| |||| ||| ||| ||| | Sbjct: 1383 tcgcagaagtacactggcgagaaggcccatgtcaaaattctgcggaattcgaaagttctt 1442 Query: 127 gaattcaacataaagctatcaatccacaaaaagctcattccagctcatataaagggcagg 186 ||||| ||||| ||||| ||| ||||||| ||||||||||||||||||||||||||| Sbjct: 1443 gaatttaacattaagctggcaactcacaaaagactcattccagctcatataaagggcagg 1502 Query: 187 ccaccgtcatactacattgttgcaggctttgtttttatggtcgtatctgttccatatctt 246 ||||| ||||| ||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 1503 ccaccatcatattacattgttgcaggcttcgtttttatggttgtttctgttccatatctc 1562 Query: 247 cgatccgagtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcat 306 ||||| |||||||||||||| || || | ||||||||| |||||||||||||||||||| Sbjct: 1563 cgatctgagtatggaaaagactatgagtatgatgcccctgtcaagttgttggacaagcac 1622 Query: 307 ctacatgcaatggcgcaatcacctgatgagcagcttgtggtggtctcacaggtgcttgtg 366 ||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 1623 ttacatgcaatggctcaatcacctgacgagcagcttgtggtggtgtcacaggttcttgta 1682 Query: 367 gcagatatcaatattggttatgaagaaattgtcaatactcaggtgcgtgcgttcaatggg 426 ||||||||||| ||||||||||||||||||||||||| |||||| | | | |||||||| Sbjct: 1683 gcagatatcaacattggttatgaagaaattgtcaatattcaggttctttctttcaatggc 1742 Query: 427 aaaccagtaaataatttgaagcaactggcgacaatggtggaagattgcaacaaggagttc 486 ||||||||||| ||||| ||||| |||| || |||||||||||||| ||| |||| | | Sbjct: 1743 aaaccagtaaaaaatttaaagcacttggcaaccatggtggaagattgtaacgaggaatac 1802 Query: 487 ttgaaatttgacatggattacgaccaggttgttgttctcgagacaaaaacagcaagggct 546 || |||||||| ||||| ||||| ||| | |||||||| ||| ||||||| |||| |||| Sbjct: 1803 ttaaaatttgatatggactacgatcagctggttgttcttgaggcaaaaacggcaaaggct 1862 Query: 547 gcgactcaggacattctaacaacacactgcataccttcagcgatgtcaga 596 || |||||||| ||||| ||||| || || |||||||| || |||||||| Sbjct: 1863 gctactcaggatattctgacaacgcattgtataccttccgcaatgtcaga 1912
>ref|XM_467732.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1704 Score = 412 bits (208), Expect = e-112 Identities = 502/600 (83%) Strand = Plus / Plus Query: 7 gccaatgacggcacagttccattcaggcatggagagcgcattggcttcagttacctagtt 66 |||||||| || |||||||| |||||||| || |||||||||||||||||||| || ||| Sbjct: 1099 gccaatgatggtacagttcctttcaggcacggcgagcgcattggcttcagttatcttgtt 1158 Query: 67 tcacagaagtatactggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcat 126 || ||||| |||||||| |||||||| | || ||||| || || | ||| ||| | ||| Sbjct: 1159 tcccagaaatatactggcgagaaggctctagttaaagtcctgcgcaattcgaaagtccat 1218 Query: 127 gaattcaacataaagctatcaatccacaaaaagctcattccagctcatataaagggcagg 186 ||||| || ||||||||| ||| || || | || || |||||||| ||||||||||| Sbjct: 1219 gaatttaaaataaagctagcaacacataagagacttgttgcagctcatgtaaagggcagg 1278 Query: 187 ccaccgtcatactacattgttgcaggctttgtttttatggtcgtatctgttccatatctt 246 ||||| ||||| ||||||||||| |||||||||||| | || ||||||||||||||| Sbjct: 1279 ccaccatcatattacattgttgctggctttgtttttgctgcagtttctgttccatatctt 1338 Query: 247 cgatccgagtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcat 306 |||||||||||||||| || || |||| |||||| || ||||||||||||| ||||||| Sbjct: 1339 agatccgagtatggaaaggactatgaatatgatgcacctgtcaagttgttggtcaagcat 1398 Query: 307 ctacatgcaatggcgcaatcacctgatgagcagcttgtggtggtctcacaggtgcttgtg 366 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||| Sbjct: 1399 ttacatgcaatggcccaatcacctgatgaacagctggtggtggtatcacaggtgcttgta 1458 Query: 367 gcagatatcaatattggttatgaagaaattgtcaatactcaggtgcgtgcgttcaatggg 426 |||||||||||||| ||||||||||| ||||||||||||||||| | ||| |||||||| Sbjct: 1459 gcagatatcaatatcggttatgaagagattgtcaatactcaggtccttgctttcaatggt 1518 Query: 427 aaaccagtaaataatttgaagcaactggcgacaatggtggaagattgcaacaaggagttc 486 | || || || ||||||||| | | | | ||||||| ||| ||||||| | || ||| Sbjct: 1519 cagcctgtgaagaatttgaagaacttagtgtcaatggttgaaaattgcaaggatgaattc 1578 Query: 487 ttgaaatttgacatggattacgaccaggttgttgttctcgagacaaaaacagcaagggct 546 ||||| ||||| |||| || |||||| ||||||| || ||||||||||| || | |||| Sbjct: 1579 ttgaagtttgatctggagtatgaccagattgttgtccttgagacaaaaactgcgaaggct 1638 Query: 547 gcgactcaggacattctaacaacacactgcataccttcagcgatgtcagatgacctgaag 606 ||||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||||||| Sbjct: 1639 gcgacacaggacattctgacaacacactgtataccgtcggcaatgtctgatgacctgaag 1698
>gb|AY107659.1| Zea mays PCO134695 mRNA sequence Length = 758 Score = 392 bits (198), Expect = e-106 Identities = 402/470 (85%) Strand = Plus / Plus Query: 115 tcaaaaattcatgaattcaacataaagctatcaatccacaaaaagctcattccagctcat 174 |||||||| |||||||| |||||||||||| ||| |||||||| ||||||||||||||| Sbjct: 27 tcaaaaatccatgaatttaacataaagctagcaacccacaaaagactcattccagctcat 86 Query: 175 ataaagggcaggccaccgtcatactacattgttgcaggctttgtttttatggtcgtatct 234 || ||||| ||||| |||||||| ||||||||||| |||||||||||||||| || ||| Sbjct: 87 atcaagggaaggccgccgtcatattacattgttgctggctttgtttttatggctgtgtct 146 Query: 235 gttccatatcttcgatccgagtatggaaaagattacgaatttgatgcccccgtcaagttg 294 ||||||||||||||||| |||||||||||||| || |||| ||||||||||| |||||| Sbjct: 147 gttccatatcttcgatctgagtatggaaaagaatatgaatacgatgcccccgtgaagttg 206 Query: 295 ttggacaagcatctacatgcaatggcgcaatcacctgatgagcagcttgtggtggtctca 354 |||||||||||| | ||||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 207 ttggacaagcatttgcatgcaatggcacaatcatctgatgagcagcttgtggtggtgtca 266 Query: 355 caggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggtgcgt 414 |||||||||||||| ||||| || |||||||| ||||| || ||||| | |||||| | | Sbjct: 267 caggtgcttgtggctgatataaacattggttacgaagatatagtcaacattcaggttctt 326 Query: 415 gcgttcaatgggaaaccagtaaataatttgaagcaactggcgacaatggtggaagattgc 474 || |||||||| | ||| || || ||||||||||| || ||||| ||||||||||| ||| Sbjct: 327 gccttcaatggcacaccggttaaaaatttgaagcacctagcgaccatggtggaagagtgc 386 Query: 475 aacaaggagttcttgaaatttgacatggattacgaccaggttgttgttctcgagacaaaa 534 || | | |||||||| ||||| |||| | ||| ||||| ||||| || ||||| ||| Sbjct: 387 aatgaagcattcttgaagtttgatctggacttcgatcaggtggttgtcctggagacgaaa 446 Query: 535 acagcaagggctgcgactcaggacattctaacaacacactgcataccttc 584 || |||| |||||| ||||| || ||||| |||||||| || |||||||| Sbjct: 447 actgcaaaggctgcaactcaagatattctgacaacacattgtataccttc 496
>gb|AY103773.1| Zea mays PCO098939 mRNA sequence Length = 1219 Score = 369 bits (186), Expect = 7e-99 Identities = 499/602 (82%), Gaps = 1/602 (0%) Strand = Plus / Plus Query: 10 aatgacggcacagttccattcaggcatggagagcgcattggcttcagttacctagtttca 69 ||||| || |||||||| ||||||||||| |||||||||||||||||||| || ||||| Sbjct: 479 aatgatggaacagttcctttcaggcatggcgagcgcattggcttcagttatctggtttct 538 Query: 70 cagaagtatactggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcatgaa 129 ||||| |||||||| ||||| || | ||| |||||||| || ||||||| |||||||| Sbjct: 539 cagaaatatactggcgagaaagctcttgttaaagttctgcgtgattcaaaagttcatgaa 598 Query: 130 ttcaacataaagctatcaatccacaaaaagctcattccagctcatat-aaagggcaggcc 188 || || |||| |||| ||| |||||| ||| || | |||||| | || ||||||||| Sbjct: 599 tttaaaataaggctagcaactcacaaacgactcgttgcggctcatgtgaaggggcaggcc 658 Query: 189 accgtcatactacattgttgcaggctttgtttttatggtcgtatctgttccatatcttcg 248 |||||||| ||||| ||||| || ||||||||| | || ||||||||||||||||| Sbjct: 659 gccgtcatattacatagttgctggttttgtttttgcagctgtttctgttccatatcttcg 718 Query: 249 atccgagtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcatct 308 ||||||||||||||||||||| |||| |||||| || ||||||||||||| |||||| | Sbjct: 719 atccgagtatggaaaagattatgaatatgatgcacctgtcaagttgttggtgaagcattt 778 Query: 309 acatgcaatggcgcaatcacctgatgagcagcttgtggtggtctcacaggtgcttgtggc 368 |||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 779 acatgcgatggcagaatcacctgatgaacagcttgtggtggtatcacaggtgcttgtatc 838 Query: 369 agatatcaatattggttatgaagaaattgtcaatactcaggtgcgtgcgttcaatgggaa 428 |||||||||||| |||||||||||||| || ||||||||||| | ||| |||||||| | Sbjct: 839 agatatcaatataggttatgaagaaatagttaatactcaggttcttgctttcaatggcca 898 Query: 429 accagtaaataatttgaagcaactggcgacaatggtggaagattgcaacaaggagttctt 488 || ||||| ||||| ||| | | ||||| ||||||||| ||||||| | || || || Sbjct: 899 gcctgtaaaaaatttaaagaacttagcgaccatggtggaaaattgcaaggatgaattttt 958 Query: 489 gaaatttgacatggattacgaccaggttgttgttctcgagacaaaaacagcaagggctgc 548 ||| ||||| |||| || |||||| ||||||| |||||||| ||||| |||| | |||| Sbjct: 959 gaagtttgatctggagtatgaccagattgttgtcctcgagacgaaaactgcaaagtctgc 1018 Query: 549 gactcaggacattctaacaacacactgcataccttcagcgatgtcagatgacctgaaggc 608 || ||||||||||| || || ||||| ||||| || || ||||| |||||||| ||||| Sbjct: 1019 tacccaggacattctgacgacgcactgtataccgtctgcaatgtcggatgaccttaaggc 1078 Query: 609 ct 610 || Sbjct: 1079 ct 1080
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 206 bits (104), Expect = 6e-50 Identities = 200/232 (86%) Strand = Plus / Plus Query: 20 cagttccattcaggcatggagagcgcattggcttcagttacctagtttcacagaagtata 79 ||||||| ||||| ||||| ||||| ||||||||||| ||||| |||| |||||||| | Sbjct: 6994489 cagttcctttcagacatggggagcgtattggcttcagctacctcatttcgcagaagtaca 6994548 Query: 80 ctggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcatgaattcaacataa 139 |||| |||||||| | ||||||| |||| |||| ||| ||| ||| |||||| ||||| | Sbjct: 6994549 ctggcgagaaggcccatgtcaaaattctgcggaattcgaaagttcttgaatttaacatta 6994608 Query: 140 agctatcaatccacaaaaagctcattccagctcatataaagggcaggccaccgtcatact 199 |||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 6994609 agctggcaactcacaaaagactcattccagctcatataaagggcaggccaccatcatatt 6994668 Query: 200 acattgttgcaggctttgtttttatggtcgtatctgttccatatcttcgatc 251 |||||||||||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 6994669 acattgttgcaggcttcgtttttatggttgtttctgttccatatctccgatc 6994720 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 254 agtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcatctacatg 313 ||||||||||||| || || | ||||||||| |||||||||||||||||||| |||||| Sbjct: 6995535 agtatggaaaagactatgagtatgatgcccctgtcaagttgttggacaagcacttacatg 6995594 Query: 314 caatggcgcaatcacctgatgagcagcttgtggtggtctcacaggt 359 ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 6995595 caatggctcaatcacctgacgagcagcttgtggtggtgtcacaggt 6995640 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 355 caggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggt 410 ||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 6995773 caggttcttgtagcagatatcaacattggttatgaagaaattgtcaatattcaggt 6995828 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 418 ttcaatgggaaaccagtaaataatttgaagcaactggcgacaatggtggaagattgcaac 477 |||||||| ||||||||||| ||||| ||||| |||| || |||||||||||||| ||| Sbjct: 6996243 ttcaatggcaaaccagtaaaaaatttaaagcacttggcaaccatggtggaagattgtaac 6996302 Query: 478 aaggagttcttgaaatttgacatggattacgaccaggt 515 |||| | ||| |||||||| ||||| ||||| ||||| Sbjct: 6996303 gaggaatacttaaaatttgatatggactacgatcaggt 6996340
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 206 bits (104), Expect = 6e-50 Identities = 200/232 (86%) Strand = Plus / Plus Query: 20 cagttccattcaggcatggagagcgcattggcttcagttacctagtttcacagaagtata 79 ||||||| ||||| ||||| ||||| ||||||||||| ||||| |||| |||||||| | Sbjct: 15276 cagttcctttcagacatggggagcgtattggcttcagctacctcatttcgcagaagtaca 15335 Query: 80 ctggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcatgaattcaacataa 139 |||| |||||||| | ||||||| |||| |||| ||| ||| ||| |||||| ||||| | Sbjct: 15336 ctggcgagaaggcccatgtcaaaattctgcggaattcgaaagttcttgaatttaacatta 15395 Query: 140 agctatcaatccacaaaaagctcattccagctcatataaagggcaggccaccgtcatact 199 |||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 15396 agctggcaactcacaaaagactcattccagctcatataaagggcaggccaccatcatatt 15455 Query: 200 acattgttgcaggctttgtttttatggtcgtatctgttccatatcttcgatc 251 |||||||||||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 15456 acattgttgcaggcttcgtttttatggttgtttctgttccatatctccgatc 15507 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 254 agtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcatctacatg 313 ||||||||||||| || || | ||||||||| |||||||||||||||||||| |||||| Sbjct: 16322 agtatggaaaagactatgagtatgatgcccctgtcaagttgttggacaagcacttacatg 16381 Query: 314 caatggcgcaatcacctgatgagcagcttgtggtggtctcacaggt 359 ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 16382 caatggctcaatcacctgacgagcagcttgtggtggtgtcacaggt 16427 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 355 caggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggt 410 ||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 16560 caggttcttgtagcagatatcaacattggttatgaagaaattgtcaatattcaggt 16615 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 418 ttcaatgggaaaccagtaaataatttgaagcaactggcgacaatggtggaagattgcaac 477 |||||||| ||||||||||| ||||| ||||| |||| || |||||||||||||| ||| Sbjct: 17030 ttcaatggcaaaccagtaaaaaatttaaagcacttggcaaccatggtggaagattgtaac 17089 Query: 478 aaggagttcttgaaatttgacatggattacgaccaggt 515 |||| | ||| |||||||| ||||| ||||| ||||| Sbjct: 17090 gaggaatacttaaaatttgatatggactacgatcaggt 17127
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 206 bits (104), Expect = 6e-50 Identities = 200/232 (86%) Strand = Plus / Plus Query: 20 cagttccattcaggcatggagagcgcattggcttcagttacctagtttcacagaagtata 79 ||||||| ||||| ||||| ||||| ||||||||||| ||||| |||| |||||||| | Sbjct: 53916 cagttcctttcagacatggggagcgtattggcttcagctacctcatttcgcagaagtaca 53975 Query: 80 ctggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcatgaattcaacataa 139 |||| |||||||| | ||||||| |||| |||| ||| ||| ||| |||||| ||||| | Sbjct: 53976 ctggcgagaaggcccatgtcaaaattctgcggaattcgaaagttcttgaatttaacatta 54035 Query: 140 agctatcaatccacaaaaagctcattccagctcatataaagggcaggccaccgtcatact 199 |||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 54036 agctggcaactcacaaaagactcattccagctcatataaagggcaggccaccatcatatt 54095 Query: 200 acattgttgcaggctttgtttttatggtcgtatctgttccatatcttcgatc 251 |||||||||||||||| ||||||||||| || |||||||||||||| ||||| Sbjct: 54096 acattgttgcaggcttcgtttttatggttgtttctgttccatatctccgatc 54147 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 254 agtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcatctacatg 313 ||||||||||||| || || | ||||||||| |||||||||||||||||||| |||||| Sbjct: 54962 agtatggaaaagactatgagtatgatgcccctgtcaagttgttggacaagcacttacatg 55021 Query: 314 caatggcgcaatcacctgatgagcagcttgtggtggtctcacaggt 359 ||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 55022 caatggctcaatcacctgacgagcagcttgtggtggtgtcacaggt 55067 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 355 caggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggt 410 ||||| ||||| ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 55200 caggttcttgtagcagatatcaacattggttatgaagaaattgtcaatattcaggt 55255 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 418 ttcaatgggaaaccagtaaataatttgaagcaactggcgacaatggtggaagattgcaac 477 |||||||| ||||||||||| ||||| ||||| |||| || |||||||||||||| ||| Sbjct: 55670 ttcaatggcaaaccagtaaaaaatttaaagcacttggcaaccatggtggaagattgtaac 55729 Query: 478 aaggagttcttgaaatttgacatggattacgaccaggt 515 |||| | ||| |||||||| ||||| ||||| ||||| Sbjct: 55730 gaggaatacttaaaatttgatatggactacgatcaggt 55767
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 135 bits (68), Expect = 2e-28 Identities = 194/236 (82%) Strand = Plus / Minus Query: 20 cagttccattcaggcatggagagcgcattggcttcagttacctagtttcacagaagtata 79 ||||||| |||||||| || |||||||||||||||||||| || ||||| ||||| |||| Sbjct: 31116886 cagttcctttcaggcacggcgagcgcattggcttcagttatcttgtttcccagaaatata 31116827 Query: 80 ctggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcatgaattcaacataa 139 |||| |||||||| | || ||||| || || | ||| ||| | |||||||| || |||| Sbjct: 31116826 ctggcgagaaggctctagttaaagtcctgcgcaattcgaaagtccatgaatttaaaataa 31116767 Query: 140 agctatcaatccacaaaaagctcattccagctcatataaagggcaggccaccgtcatact 199 ||||| ||| || || | || || |||||||| |||||||||||||||| ||||| | Sbjct: 31116766 agctagcaacacataagagacttgttgcagctcatgtaaagggcaggccaccatcatatt 31116707 Query: 200 acattgttgcaggctttgtttttatggtcgtatctgttccatatcttcgatccgag 255 |||||||||| |||||||||||| | || ||||||||||||||| |||||||| Sbjct: 31116706 acattgttgctggctttgtttttgctgcagtttctgttccatatcttagatccgag 31116651 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 254 agtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcatctacatg 313 |||||||||| || || |||| |||||| || ||||||||||||| ||||||| |||||| Sbjct: 31116496 agtatggaaaggactatgaatatgatgcacctgtcaagttgttggtcaagcatttacatg 31116437 Query: 314 caatggcgcaatcacctgatgagcagcttgtggtggtctcacaggt 359 ||||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct: 31116436 caatggcccaatcacctgatgaacagctggtggtggtatcacaggt 31116391 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 355 caggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggt 410 ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 31116263 caggtgcttgtagcagatatcaatatcggttatgaagagattgtcaatactcaggt 31116208 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 515 ttgttgttctcgagacaaaaacagcaagggctgcgactcaggacattctaacaacacact 574 ||||||| || ||||||||||| || | ||||||||| ||||||||||| |||||||||| Sbjct: 31115213 ttgttgtccttgagacaaaaactgcgaaggctgcgacacaggacattctgacaacacact 31115154 Query: 575 gcataccttcagcgatgtcagatgacctgaag 606 | ||||| || || ||||| |||||||||||| Sbjct: 31115153 gtataccgtcggcaatgtctgatgacctgaag 31115122
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 135 bits (68), Expect = 2e-28 Identities = 194/236 (82%) Strand = Plus / Minus Query: 20 cagttccattcaggcatggagagcgcattggcttcagttacctagtttcacagaagtata 79 ||||||| |||||||| || |||||||||||||||||||| || ||||| ||||| |||| Sbjct: 106110 cagttcctttcaggcacggcgagcgcattggcttcagttatcttgtttcccagaaatata 106051 Query: 80 ctggtgagaaggcacgtgtcaaagttctccggagttcaaaaattcatgaattcaacataa 139 |||| |||||||| | || ||||| || || | ||| ||| | |||||||| || |||| Sbjct: 106050 ctggcgagaaggctctagttaaagtcctgcgcaattcgaaagtccatgaatttaaaataa 105991 Query: 140 agctatcaatccacaaaaagctcattccagctcatataaagggcaggccaccgtcatact 199 ||||| ||| || || | || || |||||||| |||||||||||||||| ||||| | Sbjct: 105990 agctagcaacacataagagacttgttgcagctcatgtaaagggcaggccaccatcatatt 105931 Query: 200 acattgttgcaggctttgtttttatggtcgtatctgttccatatcttcgatccgag 255 |||||||||| |||||||||||| | || ||||||||||||||| |||||||| Sbjct: 105930 acattgttgctggctttgtttttgctgcagtttctgttccatatcttagatccgag 105875 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 254 agtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcatctacatg 313 |||||||||| || || |||| |||||| || ||||||||||||| ||||||| |||||| Sbjct: 105720 agtatggaaaggactatgaatatgatgcacctgtcaagttgttggtcaagcatttacatg 105661 Query: 314 caatggcgcaatcacctgatgagcagcttgtggtggtctcacaggt 359 ||||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct: 105660 caatggcccaatcacctgatgaacagctggtggtggtatcacaggt 105615 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 355 caggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggt 410 ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 105487 caggtgcttgtagcagatatcaatatcggttatgaagagattgtcaatactcaggt 105432 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 515 ttgttgttctcgagacaaaaacagcaagggctgcgactcaggacattctaacaacacact 574 ||||||| || ||||||||||| || | ||||||||| ||||||||||| |||||||||| Sbjct: 104437 ttgttgtccttgagacaaaaactgcgaaggctgcgacacaggacattctgacaacacact 104378 Query: 575 gcataccttcagcgatgtcagatgacctgaag 606 | ||||| || || ||||| |||||||||||| Sbjct: 104377 gtataccgtcggcaatgtctgatgacctgaag 104346
>ref|NM_123384.2| Arabidopsis thaliana serine-type endopeptidase/ serine-type peptidase/ trypsin AT5G40200 mRNA, complete cds Length = 2064 Score = 117 bits (59), Expect = 5e-23 Identities = 149/179 (83%) Strand = Plus / Plus Query: 232 tctgttccatatcttcgatccgagtatggaaaagattacgaatttgatgcccccgtcaag 291 |||||||||||||||||||| |||||||||||||| || |||||||| || || |||||| Sbjct: 1459 tctgttccatatcttcgatctgagtatggaaaagaatatgaatttgacgcacctgtcaag 1518 Query: 292 ttgttggacaagcatctacatgcaatggcgcaatcacctgatgagcagcttgtggtggtc 351 | ||||| || ||||| ||||||||||| ||||| || ||||||||||| || || Sbjct: 1519 ctattggagaaacatcttcatgcaatggctcaatccgtggacgagcagcttgttgtagtt 1578 Query: 352 tcacaggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggt 410 |||||||| ||||| | || || || |||||||||||||| |||||||| || ||||| Sbjct: 1579 tcacaggttcttgtttctgacattaacattggttatgaagagattgtcaacacccaggt 1637 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 4 atcgccaatgacggcacagttccattcaggcatggagagcgcattggcttcagttacct 62 ||||| ||||| || || |||||||| ||||||||||| || |||||||| || ||||| Sbjct: 1231 atcgctaatgatgggactgttccatttaggcatggagaacgaattggctttagctacct 1289
>gb|AY142608.1| Arabidopsis thaliana putative DegP protease (At5g40200) mRNA, complete cds Length = 1810 Score = 117 bits (59), Expect = 5e-23 Identities = 149/179 (83%) Strand = Plus / Plus Query: 232 tctgttccatatcttcgatccgagtatggaaaagattacgaatttgatgcccccgtcaag 291 |||||||||||||||||||| |||||||||||||| || |||||||| || || |||||| Sbjct: 1387 tctgttccatatcttcgatctgagtatggaaaagaatatgaatttgacgcacctgtcaag 1446 Query: 292 ttgttggacaagcatctacatgcaatggcgcaatcacctgatgagcagcttgtggtggtc 351 | ||||| || ||||| ||||||||||| ||||| || ||||||||||| || || Sbjct: 1447 ctattggagaaacatcttcatgcaatggctcaatccgtggacgagcagcttgttgtagtt 1506 Query: 352 tcacaggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggt 410 |||||||| ||||| | || || || |||||||||||||| |||||||| || ||||| Sbjct: 1507 tcacaggttcttgtttctgacattaacattggttatgaagagattgtcaacacccaggt 1565 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 4 atcgccaatgacggcacagttccattcaggcatggagagcgcattggcttcagttacct 62 ||||| ||||| || || |||||||| ||||||||||| || |||||||| || ||||| Sbjct: 1159 atcgctaatgatgggactgttccatttaggcatggagaacgaattggctttagctacct 1217
>gb|AY046023.1| Arabidopsis thaliana putative DegP protease (At5g40200) mRNA, complete cds Length = 2047 Score = 117 bits (59), Expect = 5e-23 Identities = 149/179 (83%) Strand = Plus / Plus Query: 232 tctgttccatatcttcgatccgagtatggaaaagattacgaatttgatgcccccgtcaag 291 |||||||||||||||||||| |||||||||||||| || |||||||| || || |||||| Sbjct: 1459 tctgttccatatcttcgatctgagtatggaaaagaatatgaatttgacgcacctgtcaag 1518 Query: 292 ttgttggacaagcatctacatgcaatggcgcaatcacctgatgagcagcttgtggtggtc 351 | ||||| || ||||| ||||||||||| ||||| || ||||||||||| || || Sbjct: 1519 ctattggagaaacatcttcatgcaatggctcaatccgtggacgagcagcttgttgtagtt 1578 Query: 352 tcacaggtgcttgtggcagatatcaatattggttatgaagaaattgtcaatactcaggt 410 |||||||| ||||| | || || || |||||||||||||| |||||||| || ||||| Sbjct: 1579 tcacaggttcttgtttctgacattaacattggttatgaagagattgtcaacacccaggt 1637 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 4 atcgccaatgacggcacagttccattcaggcatggagagcgcattggcttcagttacct 62 ||||| ||||| || || |||||||| ||||||||||| || |||||||| || ||||| Sbjct: 1231 atcgctaatgatgggactgttccatttaggcatggagaacgaattggctttagctacct 1289
>gb|BT013768.1| Lycopersicon esculentum clone 132653F, mRNA sequence Length = 2022 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 229 gtatctgttccatatcttcgatccgagtatggaaaagattacga 272 |||||||||||||||||||| || |||||||||||||||||||| Sbjct: 1479 gtatctgttccatatcttcgttcagagtatggaaaagattacga 1522 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 7 gccaatgacggcacagttccattcaggcatggagagcg 44 |||||||| || |||||||||||| ||||||||||||| Sbjct: 1254 gccaatgatggaacagttccattccggcatggagagcg 1291 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 322 caatcacctgatgagcagcttgtggtggtctcacaggtgcttgtggcagatatcaatatt 381 |||||||||||||| ||| |||| ||||| || ||||| ||||| || || || || ||| Sbjct: 1572 caatcacctgatgaacagattgtcgtggtttcccaggttcttgttgctgacattaacatt 1631 Query: 382 ggttatgaagaaattgtcaatactcaggt 410 || ||||| || || || ||||||||||| Sbjct: 1632 ggatatgaggagatagttaatactcaggt 1660
>dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN9 Length = 61001 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 254 agtatggaaaagattacgaatttgatgcccccgtcaagttgttggacaagcatctacatg 313 ||||||||||||| || |||||||| || || |||||| | ||||| || ||||| |||| Sbjct: 25096 agtatggaaaagaatatgaatttgacgcacctgtcaagctattggagaaacatcttcatg 25155 Query: 314 caatggcgcaatcacctgatgagcagcttgtggtggtctcacaggt 359 ||||||| ||||| || ||||||||||| || || |||||||| Sbjct: 25156 caatggctcaatccgtggacgagcagcttgttgtagtttcacaggt 25201 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 20 cagttccattcaggcatggagagcgcattggcttcagttacct 62 |||||||||| ||||||||||| || |||||||| || ||||| Sbjct: 24765 cagttccatttaggcatggagaacgaattggctttagctacct 24807 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 379 attggttatgaagaaattgtcaatactcaggt 410 |||||||||||||| |||||||| || ||||| Sbjct: 25303 attggttatgaagagattgtcaacacccaggt 25334 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tctgttccatatcttcgatc 251 |||||||||||||||||||| Sbjct: 24977 tctgttccatatcttcgatc 24996
>gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosome 3, complete sequence Length = 227492 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 332 atgagcagcttgtggtggtctc 353 |||||||||||||||||||||| Sbjct: 86527 atgagcagcttgtggtggtctc 86548
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 caaaaattcatgaattcaacataaa 140 ||||||||||||| ||||||||||| Sbjct: 25450190 caaaaattcatgagttcaacataaa 25450214
>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23, complete sequence Length = 178472 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 aaattcatgaattcaacataaagct 143 |||||||| |||||||||||||||| Sbjct: 138733 aaattcattaattcaacataaagct 138709
>emb|BX321884.15| Zebrafish DNA sequence from clone DKEYP-29A10 in linkage group 3, complete sequence Length = 173019 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 550 actcaggacattctaacaacacact 574 |||||| |||||||||||||||||| Sbjct: 133132 actcagaacattctaacaacacact 133156
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 116 caaaaattcatgaattcaacataaa 140 ||||||||||||| ||||||||||| Sbjct: 25541499 caaaaattcatgagttcaacataaa 25541523
>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete sequence Length = 117046 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 caaaaattcatgaattcaacataaa 140 ||||||||||||| ||||||||||| Sbjct: 84662 caaaaattcatgagttcaacataaa 84638
>gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete sequence Length = 154058 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 ttcaaaaattcatgaattcaa 134 ||||||||||||||||||||| Sbjct: 74413 ttcaaaaattcatgaattcaa 74393
>emb|AL136171.17| Human DNA sequence from clone RP4-584N17 on chromosome 1q42.2-43 Contains part of the DISC1 gene for disrupted in schizophrenia 1, complete sequence Length = 133968 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 tgaattcaacataaagctat 145 |||||||||||||||||||| Sbjct: 61151 tgaattcaacataaagctat 61170
>emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 6/6 Length = 155932 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 ataaagctatcaatccacaaaaag 159 ||||||||||||||| |||||||| Sbjct: 55337 ataaagctatcaatctacaaaaag 55360
>gb|AC115097.6| Homo sapiens chromosome 11, clone CTD-2532J14, complete sequence Length = 132923 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 agctatcaatccacaaaaag 159 |||||||||||||||||||| Sbjct: 20424 agctatcaatccacaaaaag 20443
>gb|AC024293.18| Homo sapiens chromosome 11, clone RP11-425L10, complete sequence Length = 70106 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 agctatcaatccacaaaaag 159 |||||||||||||||||||| Sbjct: 68550 agctatcaatccacaaaaag 68569
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaaattcatgaattcaacat 137 |||||||||||||||||||| Sbjct: 16254645 aaaattcatgaattcaacat 16254626 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaaattcatgaattcaacat 137 |||||||||||||||||||| Sbjct: 16201096 aaaattcatgaattcaacat 16201077
>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete sequence Length = 103157 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tttttatggtcgtatctgtt 237 |||||||||||||||||||| Sbjct: 46353 tttttatggtcgtatctgtt 46334
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 attcaacataaagctatcaa 148 |||||||||||||||||||| Sbjct: 807855 attcaacataaagctatcaa 807874
>gb|AC155237.2| Mus musculus BAC clone RP24-439K11 from 14, complete sequence Length = 170906 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 aaccagtaaataatttgaag 447 |||||||||||||||||||| Sbjct: 17455 aaccagtaaataatttgaag 17474
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06, complete sequence Length = 187154 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaaattcatgaattcaacat 137 |||||||||||||||||||| Sbjct: 99560 aaaattcatgaattcaacat 99541 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaaattcatgaattcaacat 137 |||||||||||||||||||| Sbjct: 46011 aaaattcatgaattcaacat 45992
>emb|AL928968.7| Zebrafish DNA sequence from clone CH211-103C14, complete sequence Length = 173210 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gtggtctcacaggtgcttgt 365 |||||||||||||||||||| Sbjct: 47659 gtggtctcacaggtgcttgt 47640
>gb|U24679.1|CGU24679 Cricetinae gen. sp. beta-cell E-box transcription activator 2 (BETA2) mRNA, partial cds Length = 2458 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 ctcaggacattctaacaaca 570 |||||||||||||||||||| Sbjct: 47 ctcaggacattctaacaaca 66 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,722,809 Number of Sequences: 3902068 Number of extensions: 5722809 Number of successful extensions: 108155 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107909 Number of HSP's gapped (non-prelim): 238 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)