ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39k09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009629.1| Triticum aestivum clone wre1n.pk168.h11:fis, full insert mRNA sequence Length = 1391 Score = 1132 bits (571), Expect = 0.0 Identities = 637/659 (96%) Strand = Plus / Plus Query: 20 tgcaactgcattccagtatacttctcttggcaggccaatcttgggttctgctgataacgt 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 tgcaactgcattccagtatacttctcttggcaggccaatcttgggttctgctgataacgt 186 Query: 80 caagtctatcaccaaaaaggatctcgtagactacattcaaaatcattacacggcttctag 139 ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| Sbjct: 187 caagtctatcaccaaaaagaatctcatagactacattcaaaagcattacacggcttctag 246 Query: 140 aatggttattactgctgctggtgctgttaagcatgatgatattgtacaacaggcaaaaga 199 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 247 aatggtcattactgctgctggtgctgttaagcatgatgatattgtacagcaggcaaaaga 306 Query: 200 gctgttcaaaacgctgccaactgaccctacaacaaccaacatgttggttgctaagcagcc 259 |||||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||| Sbjct: 307 gctgttcaaatcgctgccaactgaccctacaacaactaacatgttggttgctgaacagcc 366 Query: 260 agccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatt 319 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 367 agccatttttactggttctgaggtacgaatcattgatgatgacatgcccctggcccaatt 426 Query: 320 tgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatggttat 379 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 427 tgctgttgccttcaatggagcatcctggacagatcctgattctattgcattaatggttat 486 Query: 380 gcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcgga 439 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 gcaaactatgcttggttcgtggaacaagagtgctggaggagggaagcacatgggttcgga 546 Query: 440 gcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaa 499 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 547 gcttgtacagagagtagcaatcaatgaaatagctgagagtataatggcattcaatacaaa 606 Query: 500 ctataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatga 559 ||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 607 ctacaaggacactggcctgtttggtgtctatgctgtcgctaaggctgattgcttggatga 666 Query: 560 tttggcttttgcaattatgcaagagatgagcaaattatcatacagggttaccgaagagga 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 tttggcttttgcaattatgcaagagatgagcaaattatcatacagggttaccgaagagga 726 Query: 620 tgttattcgtgcacgtaatcagctgaaatcgtccatccaactacaccttgatggctcca 678 ||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 727 tgttattcgtgcacgcaatcagctgaaatcctccatccaactccaccttgatggctcca 785
>dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025E12, full insert sequence Length = 2166 Score = 642 bits (324), Expect = 0.0 Identities = 592/679 (87%), Gaps = 2/679 (0%) Strand = Plus / Plus Query: 2 gttatattcgatn-tctcc-tgcaactgcattccagtatacttctcttggcaggccaatc 59 |||||||||||| ||||| |||||||||||||||||| |||||||||||||| |||||| Sbjct: 864 gttatattcgatcatctccatgcaactgcattccagtacacttctcttggcagaccaatc 923 Query: 60 ttgggttctgctgataacgtcaagtctatcaccaaaaaggatctcgtagactacattcaa 119 ||||||||||| || || |||||||| || ||| || |||| ||| | || ||| || Sbjct: 924 ttgggttctgcagaaaatgtcaagtcaattacccaagaggacctccagaagtatattgaa 983 Query: 120 aatcattacacggcttctagaatggttattactgctgctggtgctgttaagcatgatgat 179 | ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 984 acacattatacggctcctagaatggttatcactgctgctggtgctgttaagcatgatgat 1043 Query: 180 attgtacaacaggcaaaagagctgttcaaaacgctgccaactgaccctacaacaaccaac 239 |||||| | ||||| | | ||||| || || |||||||||||||||||||| | | Sbjct: 1044 attgtagagatggcaacaaaactgtttaatgacctaccaactgaccctacaacaacaagc 1103 Query: 240 atgttggttgctaagcagccagccatttttactggttctgaggtacgaatcattgatgat 299 ||||||||| ||| || |||||| ||||||||||||||||| || |||||||||||| Sbjct: 1104 atgttggtttctacccaaccagcctgctttactggttctgaggtccgcatcattgatgat 1163 Query: 300 gacatgccccttgctcaatttgctgttgccttcaatggagcatcctggacagatcccgat 359 |||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| ||| Sbjct: 1164 gacatgccccttgctcaatttgctgttgcctttaatggagcatcatggatagatcctgat 1223 Query: 360 tctattgcattaatggttatgcaaaccatgcttggttcctggaacaagagtgctggagga 419 |||||||| || ||||| |||||| |||||||||| || ||||||||||||||||||||| Sbjct: 1224 tctattgccttgatggtcatgcaatccatgcttggctcatggaacaagagtgctggagga 1283 Query: 420 gggaagcacatgggttcggagcttgtacagagagtagcaatcaatgacatagctgagagt 479 ||||| ||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 1284 gggaaacacatgggttcagagcttgtacaaagggtagcgatcaatgacattgctgagagt 1343 Query: 480 ataatggcattcaacacaaactataaggacactggcctgtttggtgtgtatgctgtcgct 539 ||||||||||| || ||||| || |||||||||||||| |||||||| || ||||| ||| Sbjct: 1344 ataatggcatttaatacaaattacaaggacactggcctctttggtgtctacgctgttgct 1403 Query: 540 aagcctgattgcttggatgatttggcttttgcaattatgcaagagatgagcaaattatca 599 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | ||| Sbjct: 1404 aagcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtca 1463 Query: 600 tacagggttaccgaagaggatgttattcgtgcacgtaatcagctgaaatcgtccatccaa 659 ||| ||||||| || || |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1464 taccgggttactgaggaagatgttatccgtgcacgtaatcagctgaaatcttccatccaa 1523 Query: 660 ctacaccttgatggctcca 678 || ||||| ||||| |||| Sbjct: 1524 ctgcacctcgatggttcca 1542
>gb|AY108579.1| Zea mays PCO102927 mRNA sequence Length = 2137 Score = 638 bits (322), Expect = e-180 Identities = 571/654 (87%) Strand = Plus / Plus Query: 20 tgcaactgcattccagtatacttctcttggcaggccaatcttgggttctgctgataacgt 79 ||||||||||||||| ||||| || |||||||| ||||||||||||||||| |||||||| Sbjct: 872 tgcaactgcattccaatatacatcccttggcagaccaatcttgggttctgcagataacgt 931 Query: 80 caagtctatcaccaaaaaggatctcgtagactacattcaaaatcattacacggcttctag 139 |||||| ||||||||| |||| |||| |||||||| || |||||| || |||||||| Sbjct: 932 caagtcaatcaccaaagaggacctcgagaactacattgcaactcattatacagcttctag 991 Query: 140 aatggttattactgctgctggtgctgttaagcatgatgatattgtacaacaggcaaaaga 199 ||||||||| || ||||| || |||||| ||||| || ||||| | |||||||| | Sbjct: 992 aatggttatcacagctgcaggcaatgttaaacatgaagacattgttgagcaggcaaagaa 1051 Query: 200 gctgttcaaaacgctgccaactgaccctacaacaaccaacatgttggttgctaagcagcc 259 | |||||| | ||| ||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 1052 gttgttcagcaagctatcaactgaccctacaacaacaaacatgttggtctctaagcagcc 1111 Query: 260 agccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatt 319 |||| ||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1112 agcctctttcactggttctgaggttcgaatcattgatgatgacatgcccctcgctcaatt 1171 Query: 320 tgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatggttat 379 ||||||||| |||||||||||||| ||| ||||| |||||| ||||| | |||||||| Sbjct: 1172 tgctgttgctttcaatggagcatcatgggtggatcctgattctgttgcactgatggttat 1231 Query: 380 gcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcgga 439 |||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| || Sbjct: 1232 gcaaacaatgcttggttcatggaacaagagtgctggtggaggaaagcacatgggttcaga 1291 Query: 440 gcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaa 499 |||||| ||||| | ||||||||||||||| ||||||||| |||||| |||||| || || Sbjct: 1292 gcttgtgcagagggcagcaatcaatgacatcgctgagagtgtaatgggattcaatacgaa 1351 Query: 500 ctataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatga 559 || ||||||||||| || |||||||| |||||||| |||||| |||||||||||||||| Sbjct: 1352 ttacaaggacactggtctttttggtgtctatgctgttgctaaggctgattgcttggatga 1411 Query: 560 tttggcttttgcaattatgcaagagatgagcaaattatcatacagggttaccgaagagga 619 ||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||| || Sbjct: 1412 tttggcttttgcaattatgcatgagatgagcaaattgtcataccgggttacggaagaaga 1471 Query: 620 tgttattcgtgcacgtaatcagctgaaatcgtccatccaactacaccttgatgg 673 |||||| |||||||||||||||||||| || || |||||||| ||||||||||| Sbjct: 1472 tgttatccgtgcacgtaatcagctgaagtcctctatccaactccaccttgatgg 1525
>dbj|AK060718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E10, full insert sequence Length = 1410 Score = 634 bits (320), Expect = e-179 Identities = 591/679 (87%), Gaps = 2/679 (0%) Strand = Plus / Plus Query: 2 gttatattcgatn-tctcc-tgcaactgcattccagtatacttctcttggcaggccaatc 59 |||||||||||| ||||| |||||||||||||||||| |||||||||||||| |||||| Sbjct: 107 gttatattcgatcatctccatgcaactgcattccagtacacttctcttggcagaccaatc 166 Query: 60 ttgggttctgctgataacgtcaagtctatcaccaaaaaggatctcgtagactacattcaa 119 ||||||||||| || || |||||||| || ||| || |||| ||| | || ||| || Sbjct: 167 ttgggttctgcagaaaatgtcaagtcaattacccaagaggacctccagaagtatattgaa 226 Query: 120 aatcattacacggcttctagaatggttattactgctgctggtgctgttaagcatgatgat 179 | ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 227 acacattatacggctcctagaatggttatcactgctgctggtgctgttaagcatgatgat 286 Query: 180 attgtacaacaggcaaaagagctgttcaaaacgctgccaactgaccctacaacaaccaac 239 |||||| | ||||| | | ||||| || || |||||||||||||||||||| | | Sbjct: 287 attgtagagatggcaacaaaactgtttaatgacctaccaactgaccctacaacaacaagc 346 Query: 240 atgttggttgctaagcagccagccatttttactggttctgaggtacgaatcattgatgat 299 ||||||||| ||| || |||||| ||||||||||||||||| || |||||||||| | Sbjct: 347 atgttggtttctacccaaccagcctgctttactggttctgaggtccgcatcattgatggt 406 Query: 300 gacatgccccttgctcaatttgctgttgccttcaatggagcatcctggacagatcccgat 359 |||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| ||| Sbjct: 407 gacatgccccttgctcaatttgctgttgcctttaatggagcatcatggatagatcctgat 466 Query: 360 tctattgcattaatggttatgcaaaccatgcttggttcctggaacaagagtgctggagga 419 |||||||| || ||||| |||||| |||||||||| || ||||||||||||||||||||| Sbjct: 467 tctattgccttgatggtcatgcaatccatgcttggctcatggaacaagagtgctggagga 526 Query: 420 gggaagcacatgggttcggagcttgtacagagagtagcaatcaatgacatagctgagagt 479 ||||| ||||||||||| ||||||||||| || ||||| ||||||||||| ||||||||| Sbjct: 527 gggaaacacatgggttcagagcttgtacaaagggtagcgatcaatgacattgctgagagt 586 Query: 480 ataatggcattcaacacaaactataaggacactggcctgtttggtgtgtatgctgtcgct 539 ||||||||||| || ||||| || |||||||||||||| |||||||| || ||||| ||| Sbjct: 587 ataatggcatttaatacaaattacaaggacactggcctctttggtgtctacgctgttgct 646 Query: 540 aagcctgattgcttggatgatttggcttttgcaattatgcaagagatgagcaaattatca 599 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | ||| Sbjct: 647 aagcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtca 706 Query: 600 tacagggttaccgaagaggatgttattcgtgcacgtaatcagctgaaatcgtccatccaa 659 ||| ||||||| || || |||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 707 taccgggttactgaggaagatgttatccgtgcacgtaatcagctgaaatcttccatccaa 766 Query: 660 ctacaccttgatggctcca 678 || ||||| ||||| |||| Sbjct: 767 ctgcacctcgatggttcca 785
>gb|AY111909.1| Zea mays CL491_-2 mRNA sequence Length = 584 Score = 511 bits (258), Expect = e-142 Identities = 406/457 (88%) Strand = Plus / Plus Query: 217 caactgaccctacaacaaccaacatgttggttgctaagcagccagccatttttactggtt 276 ||||||||||||||||||| ||||||||||| |||||||| |||||| ||| || |||| Sbjct: 39 caactgaccctacaacaacaaacatgttggtcgctaagcaaccagcctctttcacgggtt 98 Query: 277 ctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgccttcaatg 336 ||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 99 ctgaggttcgaatcattgacgatgacatgccccttgctcaatttgctgttgctttcaatg 158 Query: 337 gagcatcctggacagatcccgattctattgcattaatggttatgcaaaccatgcttggtt 396 ||||||| ||| |||||| |||||| ||||| | |||||||||||| | |||||||||| Sbjct: 159 gagcatcatgggtagatcctgattctgttgcactgatggttatgcaatcaatgcttggtt 218 Query: 397 cctggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacagagagtag 456 | ||||||||||||||||| ||||| |||||||||||||||||||||||||||| || || Sbjct: 219 catggaacaagagtgctggtggaggaaagcacatgggttcggagcttgtacagaaagcag 278 Query: 457 caatcaatgacatagctgagagtataatggcattcaacacaaactataaggacactggcc 516 ||||||||||||| ||||||||| ||||| ||||||||| || || ||||||||||| | Sbjct: 279 caatcaatgacattgctgagagtgtaatgtcattcaacatgaattacaaggacactggtc 338 Query: 517 tgtttggtgtgtatgctgtcgctaagcctgattgcttggatgatttggcttttgcaatta 576 ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 339 nnnnnggtgtctatgctgttgctaaggctgattgcttggatgatttggcttttgcaatta 398 Query: 577 tgcaagagatgagcaaattatcatacagggttaccgaagaggatgttattcgtgcacgta 636 |||| |||||||||||||| |||||| ||||||| || || |||||||| |||||||||| Sbjct: 399 tgcatgagatgagcaaattgtcataccgggttacggaggaagatgttatccgtgcacgta 458 Query: 637 atcagctgaaatcgtccatccaactacaccttgatgg 673 |||||||||| || || |||||||| ||||||||||| Sbjct: 459 atcagctgaagtcctcaatccaactccaccttgatgg 495
>gb|AF297643.1|AF297643 Cucumis melo mitochondrial processing peptidase beta subunit mRNA, complete cds; nuclear gene for mitochondrial product Length = 1906 Score = 208 bits (105), Expect = 2e-50 Identities = 276/333 (82%) Strand = Plus / Plus Query: 242 gttggttgctaagcagccagccatttttactggttctgaggtacgaatcattgatgatga 301 ||||||||| ||| ||||||| ||||||||||| || ||||| || || ||||||| || Sbjct: 966 gttggttgcaaaggagccagcaatttttactggctccgaggttcggatagttgatgacga 1025 Query: 302 catgccccttgctcaatttgctgttgccttcaatggagcatcctggacagatcccgattc 361 | ||| | |||||||||||| |||| || ||||||||||||||||||||||| || || Sbjct: 1026 tgttcccttggctcaatttgctattgcttttaatggagcatcctggacagatccagactc 1085 Query: 362 tattgcattaatggttatgcaaaccatgcttggttcctggaacaagagtgctggaggagg 421 ||||| | ||||| |||||| | ||| | ||||||||||| || ||||||||||| || Sbjct: 1086 cattgccctgatggtcatgcaagctatgttgggttcctggaataaaagtgctggaggtgg 1145 Query: 422 gaagcacatgggttcggagcttgtacagagagtagcaatcaatgacatagctgagagtat 481 ||||| |||||||| ||||| | || ||||| || |||||||| |||| || ||||| Sbjct: 1146 aaagcatatgggttctgagctggcccaaagagttgccatcaatgaggtagcagaaagtat 1205 Query: 482 aatggcattcaacacaaactataaggacactggcctgtttggtgtgtatgctgtcgctaa 541 ||||| |||||||| || || ||||||||||| || |||||||| |||||||| || || Sbjct: 1206 gatggctttcaacaccaattacaaggacactggtctttttggtgtctatgctgttgcaaa 1265 Query: 542 gcctgattgcttggatgatttggcttttgcaat 574 |||||| ||||||||||||||||||| |||||| Sbjct: 1266 gcctgactgcttggatgatttggcttatgcaat 1298 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 138 agaatggttattactgctgctggtgctgttaagcatgatgatattgt 184 |||||||||||| ||||| | || |||||||||||||| ||| |||| Sbjct: 862 agaatggttattgctgcttccggagctgttaagcatgaggattttgt 908 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 gcaactgcattccagtatact 41 ||||||||||||||||||||| Sbjct: 745 gcaactgcattccagtatact 765
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 288 atcattgatgatgacatgccccttgctcaatttgctgttgccttcaatggagcatcctgg 347 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 5840289 atcattgatgatgacatgccccttgctcaatttgctgttgcctttaatggagcatcatgg 5840348 Query: 348 acagatcccgattctattgcattaatggttatgcaaaccatgcttggttcctggaacaag 407 | |||||| ||||||||||| || ||||| |||||| |||||||||| || ||||||||| Sbjct: 5840349 atagatcctgattctattgccttgatggtcatgcaatccatgcttggctcatggaacaag 5840408 Query: 408 agtgctggaggagggaagcacatggg 433 ||||||||||||||||| |||||||| Sbjct: 5840409 agtgctggaggagggaaacacatggg 5840434 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 541 agcctgattgcttggatgatttggcttttgcaattatgcaagagatgagcaaattatcat 600 ||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | |||| Sbjct: 5841336 agcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtcat 5841395 Query: 601 acagggttaccgaagaggatgttattcgtgcacgtaatcag 641 || ||||||| || || |||||||| ||||||||||||||| Sbjct: 5841396 accgggttactgaggaagatgttatccgtgcacgtaatcag 5841436 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 433 gttcggagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattca 492 |||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||| | Sbjct: 5840540 gttcagagcttgtacaaagggtagcgatcaatgacattgctgagagtataatggcattta 5840599 Query: 493 acacaaactataaggacactggcctgtttggtgtgtatgctgtcgctaag 542 | ||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 5840600 atacaaattacaaggacactggcctctttggtgtctacgctgttgctaag 5840649 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 143 ggttattactgctgctggtgctgttaagcatgatgatattgtacaacaggcaaaagagct 202 |||||| |||||||||||||||||||||||||||||||||||| | ||||| | | || Sbjct: 5840075 ggttatcactgctgctggtgctgttaagcatgatgatattgtagagatggcaacaaaact 5840134 Query: 203 gttcaaaacgctgccaactgaccctacaacaaccaacatgttggttgctaagcagccagc 262 ||| || || |||||||||||||||||||| | |||||||||| ||| || ||||| Sbjct: 5840135 gtttaatgacctaccaactgaccctacaacaacaagcatgttggtttctacccaaccagc 5840194 Query: 263 catttttactggttctgaggt 283 | ||||||||||||||||| Sbjct: 5840195 ctgctttactggttctgaggt 5840215 Score = 93.7 bits (47), Expect = 7e-16 Identities = 78/86 (90%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 2 gttatattcgatn-tctcc-tgcaactgcattccagtatacttctcttggcaggccaatc 59 |||||||||||| ||||| |||||||||||||||||| |||||||||||||| |||||| Sbjct: 5839808 gttatattcgatcatctccatgcaactgcattccagtacacttctcttggcagaccaatc 5839867 Query: 60 ttgggttctgctgataacgtcaagtc 85 ||||||||||| || || |||||||| Sbjct: 5839868 ttgggttctgcagaaaatgtcaagtc 5839893 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 639 cagctgaaatcgtccatccaactacaccttgatggctcca 678 ||||||||||| ||||||||||| ||||| ||||| |||| Sbjct: 5841523 cagctgaaatcttccatccaactgcacctcgatggttcca 5841562
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 288 atcattgatgatgacatgccccttgctcaatttgctgttgccttcaatggagcatcctgg 347 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 69119 atcattgatgatgacatgccccttgctcaatttgctgttgcctttaatggagcatcatgg 69178 Query: 348 acagatcccgattctattgcattaatggttatgcaaaccatgcttggttcctggaacaag 407 | |||||| ||||||||||| || ||||| |||||| |||||||||| || ||||||||| Sbjct: 69179 atagatcctgattctattgccttgatggtcatgcaatccatgcttggctcatggaacaag 69238 Query: 408 agtgctggaggagggaagcacatggg 433 ||||||||||||||||| |||||||| Sbjct: 69239 agtgctggaggagggaaacacatggg 69264 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 541 agcctgattgcttggatgatttggcttttgcaattatgcaagagatgagcaaattatcat 600 ||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | |||| Sbjct: 70166 agcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtcat 70225 Query: 601 acagggttaccgaagaggatgttattcgtgcacgtaatcag 641 || ||||||| || || |||||||| ||||||||||||||| Sbjct: 70226 accgggttactgaggaagatgttatccgtgcacgtaatcag 70266 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 433 gttcggagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattca 492 |||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||| | Sbjct: 69370 gttcagagcttgtacaaagggtagcgatcaatgacattgctgagagtataatggcattta 69429 Query: 493 acacaaactataaggacactggcctgtttggtgtgtatgctgtcgctaag 542 | ||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 69430 atacaaattacaaggacactggcctctttggtgtctacgctgttgctaag 69479 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 143 ggttattactgctgctggtgctgttaagcatgatgatattgtacaacaggcaaaagagct 202 |||||| |||||||||||||||||||||||||||||||||||| | ||||| | | || Sbjct: 68905 ggttatcactgctgctggtgctgttaagcatgatgatattgtagagatggcaacaaaact 68964 Query: 203 gttcaaaacgctgccaactgaccctacaacaaccaacatgttggttgctaagcagccagc 262 ||| || || |||||||||||||||||||| | |||||||||| ||| || ||||| Sbjct: 68965 gtttaatgacctaccaactgaccctacaacaacaagcatgttggtttctacccaaccagc 69024 Query: 263 catttttactggttctgaggt 283 | ||||||||||||||||| Sbjct: 69025 ctgctttactggttctgaggt 69045 Score = 93.7 bits (47), Expect = 7e-16 Identities = 78/86 (90%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 2 gttatattcgatn-tctcc-tgcaactgcattccagtatacttctcttggcaggccaatc 59 |||||||||||| ||||| |||||||||||||||||| |||||||||||||| |||||| Sbjct: 68638 gttatattcgatcatctccatgcaactgcattccagtacacttctcttggcagaccaatc 68697 Query: 60 ttgggttctgctgataacgtcaagtc 85 ||||||||||| || || |||||||| Sbjct: 68698 ttgggttctgcagaaaatgtcaagtc 68723 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 639 cagctgaaatcgtccatccaactacaccttgatggctcca 678 ||||||||||| ||||||||||| ||||| ||||| |||| Sbjct: 70353 cagctgaaatcttccatccaactgcacctcgatggttcca 70392
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 288 atcattgatgatgacatgccccttgctcaatttgctgttgccttcaatggagcatcctgg 347 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 5839502 atcattgatgatgacatgccccttgctcaatttgctgttgcctttaatggagcatcatgg 5839561 Query: 348 acagatcccgattctattgcattaatggttatgcaaaccatgcttggttcctggaacaag 407 | |||||| ||||||||||| || ||||| |||||| |||||||||| || ||||||||| Sbjct: 5839562 atagatcctgattctattgccttgatggtcatgcaatccatgcttggctcatggaacaag 5839621 Query: 408 agtgctggaggagggaagcacatggg 433 ||||||||||||||||| |||||||| Sbjct: 5839622 agtgctggaggagggaaacacatggg 5839647 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 541 agcctgattgcttggatgatttggcttttgcaattatgcaagagatgagcaaattatcat 600 ||||||| |||||||||||||||||||||||||| ||||||||||| |||||| | |||| Sbjct: 5840549 agcctgactgcttggatgatttggcttttgcaatcatgcaagagattagcaaactgtcat 5840608 Query: 601 acagggttaccgaagaggatgttattcgtgcacgtaatcag 641 || ||||||| || || |||||||| ||||||||||||||| Sbjct: 5840609 accgggttactgaggaagatgttatccgtgcacgtaatcag 5840649 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 433 gttcggagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattca 492 |||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||| | Sbjct: 5839753 gttcagagcttgtacaaagggtagcgatcaatgacattgctgagagtataatggcattta 5839812 Query: 493 acacaaactataaggacactggcctgtttggtgtgtatgctgtcgctaag 542 | ||||| || |||||||||||||| |||||||| || ||||| |||||| Sbjct: 5839813 atacaaattacaaggacactggcctctttggtgtctacgctgttgctaag 5839862 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 143 ggttattactgctgctggtgctgttaagcatgatgatattgtacaacaggcaaaagagct 202 |||||| |||||||||||||||||||||||||||||||||||| | ||||| | | || Sbjct: 5839288 ggttatcactgctgctggtgctgttaagcatgatgatattgtagagatggcaacaaaact 5839347 Query: 203 gttcaaaacgctgccaactgaccctacaacaaccaacatgttggttgctaagcagccagc 262 ||| || || |||||||||||||||||||| | |||||||||| ||| || ||||| Sbjct: 5839348 gtttaatgacctaccaactgaccctacaacaacaagcatgttggtttctacccaaccagc 5839407 Query: 263 catttttactggttctgaggt 283 | ||||||||||||||||| Sbjct: 5839408 ctgctttactggttctgaggt 5839428 Score = 93.7 bits (47), Expect = 7e-16 Identities = 78/86 (90%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 2 gttatattcgatn-tctcc-tgcaactgcattccagtatacttctcttggcaggccaatc 59 |||||||||||| ||||| |||||||||||||||||| |||||||||||||| |||||| Sbjct: 5839021 gttatattcgatcatctccatgcaactgcattccagtacacttctcttggcagaccaatc 5839080 Query: 60 ttgggttctgctgataacgtcaagtc 85 ||||||||||| || || |||||||| Sbjct: 5839081 ttgggttctgcagaaaatgtcaagtc 5839106 Score = 48.1 bits (24), Expect = 0.038 Identities = 36/40 (90%) Strand = Plus / Plus Query: 639 cagctgaaatcgtccatccaactacaccttgatggctcca 678 ||||||||||| ||||||||||| ||||| ||||| |||| Sbjct: 5840736 cagctgaaatcttccatccaactgcacctcgatggttcca 5840775
>emb|X80237.1|STBIMPP S.tuberosum mRNA for beta-I MPP Length = 1961 Score = 165 bits (83), Expect = 2e-37 Identities = 245/299 (81%) Strand = Plus / Plus Query: 256 agccagccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctc 315 ||||||| || ||||| ||||| ||| |||| |||||||||||||| |||| || |||| Sbjct: 977 agccagcaatatttacaggttcagagatacgtatcattgatgatgatctgcctctcgctc 1036 Query: 316 aatttgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatgg 375 ||||||||||||| || | |||||| || |||||||| || || || || || || |||| Sbjct: 1037 aatttgctgttgcatttagtggagcgtcatggacagaccctgactccatagctttgatgg 1096 Query: 376 ttatgcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggtt 435 | |||||| ||||| || || |||||||| ||| | |||||||| ||||||||||||| Sbjct: 1097 tcatgcaacaaatgctaggatcatggaacaaaagttcaggaggaggaaagcacatgggtt 1156 Query: 436 cggagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaaca 495 | |||||||| ||||| || || || ||||| ||||||| ||| | ||||| || |||| Sbjct: 1157 cagagcttgtccagagggtggccattaatgagctagctgaaagtgtgatggcttttaaca 1216 Query: 496 caaactataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttg 554 | |||||||| || || || ||||||||||| ||||||| |||||||||||||||||| Sbjct: 1217 ccaactataaagatacagggctgtttggtgtctatgctgaagctaagcctgattgcttg 1275 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 625 ttcgtgcacgtaatcagctgaaatc 649 |||| |||||||||||||||||||| Sbjct: 1346 ttcgcgcacgtaatcagctgaaatc 1370
>gb|AF363285.1|AF363285 Avicennia marina mitochondrial processing peptidase mRNA, complete cds; nuclear gene for mitochondrial product Length = 1870 Score = 163 bits (82), Expect = 9e-37 Identities = 256/314 (81%) Strand = Plus / Plus Query: 265 tttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctg 324 ||||||||||||| ||||| | || | ||||||||||| || ||||| |||||||||| Sbjct: 1006 tttttactggttcagaggtgaggatgctcgatgatgacattcctcttgcccaatttgctg 1065 Query: 325 ttgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaa 384 ||||||| | || || || ||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 1066 ttgcctttgaaggggcttcatggacagatccagattccattgctttaatggtcatgcagt 1125 Query: 385 ccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttg 444 | ||| | ||||| ||||| || | ||||| || || ||||| |||||||| ||||||| Sbjct: 1126 cgatgttaggttcttggaataaaaatgctgttggtggaaagcatatgggttctgagcttg 1185 Query: 445 tacagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactata 504 ||||||||| | |||||||| ||||| ||||| || ||||| ||||| || ||||||| Sbjct: 1186 cacagagagttgggatcaatgaaatagccgagagcatgatggctttcaataccaactata 1245 Query: 505 aggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgatttgg 564 | |||||||| | |||||||| |||||| | ||||||||||| |||||||| ||||||| Sbjct: 1246 aagacactggtttatttggtgtttatgctattgctaagcctgactgcttggacgatttgg 1305 Query: 565 cttttgcaattatg 578 | | ||| |||||| Sbjct: 1306 cctatgcgattatg 1319 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 ctggtgctgttaagcatgatgatattgt 184 ||||||||||||||||||| ||| |||| Sbjct: 895 ctggtgctgttaagcatgaagattttgt 922
>ref|NM_111075.2| Arabidopsis thaliana MPPBETA; metalloendopeptidase AT3G02090 (MPPBETA) transcript variant AT3G02090.1 mRNA, complete cds Length = 2056 Score = 153 bits (77), Expect = 9e-34 Identities = 242/297 (81%) Strand = Plus / Plus Query: 266 ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 325 |||||||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||| Sbjct: 1035 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1094 Query: 326 tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 385 |||||| | |||||||| ||||| ||||| ||||| |||| | |||||||||||||| Sbjct: 1095 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1154 Query: 386 catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 445 ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || || Sbjct: 1155 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1214 Query: 446 acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 505 ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 1215 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1274 Query: 506 ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 562 ||| ||||| ||||| || || ||||| || || ||| | ||||||||||||||||| Sbjct: 1275 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1331 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 109 actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 168 |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || ||||||| Sbjct: 878 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 937 Query: 169 agcatga 175 ||||||| Sbjct: 938 agcatga 944
>ref|NM_180169.1| Arabidopsis thaliana MPPBETA; metalloendopeptidase AT3G02090 (MPPBETA) transcript variant AT3G02090.2 mRNA, complete cds Length = 2060 Score = 153 bits (77), Expect = 9e-34 Identities = 242/297 (81%) Strand = Plus / Plus Query: 266 ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 325 |||||||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||| Sbjct: 1035 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1094 Query: 326 tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 385 |||||| | |||||||| ||||| ||||| ||||| |||| | |||||||||||||| Sbjct: 1095 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1154 Query: 386 catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 445 ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || || Sbjct: 1155 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1214 Query: 446 acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 505 ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 1215 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1274 Query: 506 ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 562 ||| ||||| ||||| || || ||||| || || ||| | ||||||||||||||||| Sbjct: 1275 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1331 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 109 actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 168 |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || ||||||| Sbjct: 878 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 937 Query: 169 agcatga 175 ||||||| Sbjct: 938 agcatga 944
>gb|BT000830.1| Arabidopsis thaliana putative mitochondrial processing peptidase (At3g02090/F1C9_12) mRNA, complete cds Length = 1596 Score = 153 bits (77), Expect = 9e-34 Identities = 242/297 (81%) Strand = Plus / Plus Query: 266 ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 325 |||||||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||| Sbjct: 960 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1019 Query: 326 tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 385 |||||| | |||||||| ||||| ||||| ||||| |||| | |||||||||||||| Sbjct: 1020 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1079 Query: 386 catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 445 ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || || Sbjct: 1080 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1139 Query: 446 acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 505 ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 1140 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1199 Query: 506 ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 562 ||| ||||| ||||| || || ||||| || || ||| | ||||||||||||||||| Sbjct: 1200 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1256 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 109 actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 168 |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || ||||||| Sbjct: 803 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 862 Query: 169 agcatga 175 ||||||| Sbjct: 863 agcatga 869
>gb|BT000662.1| Arabidopsis thaliana clone RAFL07-09-O22 (R10705) putative mitochondrial processing peptidase (At3g02090) mRNA, complete cds Length = 2036 Score = 153 bits (77), Expect = 9e-34 Identities = 242/297 (81%) Strand = Plus / Plus Query: 266 ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 325 |||||||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||| Sbjct: 1023 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1082 Query: 326 tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 385 |||||| | |||||||| ||||| ||||| ||||| |||| | |||||||||||||| Sbjct: 1083 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1142 Query: 386 catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 445 ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || || Sbjct: 1143 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1202 Query: 446 acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 505 ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 1203 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1262 Query: 506 ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 562 ||| ||||| ||||| || || ||||| || || ||| | ||||||||||||||||| Sbjct: 1263 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1319 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 109 actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 168 |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || ||||||| Sbjct: 866 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 925 Query: 169 agcatga 175 ||||||| Sbjct: 926 agcatga 932
>gb|AY057579.1| Arabidopsis thaliana At3g02090 mRNA sequence Length = 2026 Score = 153 bits (77), Expect = 9e-34 Identities = 242/297 (81%) Strand = Plus / Plus Query: 266 ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 325 |||||||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||| Sbjct: 1031 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1090 Query: 326 tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 385 |||||| | |||||||| ||||| ||||| ||||| |||| | |||||||||||||| Sbjct: 1091 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1150 Query: 386 catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 445 ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || || Sbjct: 1151 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1210 Query: 446 acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 505 ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 1211 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1270 Query: 506 ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 562 ||| ||||| ||||| || || ||||| || || ||| | ||||||||||||||||| Sbjct: 1271 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1327 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 109 actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 168 |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || ||||||| Sbjct: 873 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 932 Query: 169 agcatga 175 ||||||| Sbjct: 933 agcatga 939
>gb|AY126990.1| Arabidopsis thaliana AT3g02090/F1C9_12 mRNA, complete cds Length = 1911 Score = 153 bits (77), Expect = 9e-34 Identities = 242/297 (81%) Strand = Plus / Plus Query: 266 ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 325 |||||||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||| Sbjct: 1030 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1089 Query: 326 tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 385 |||||| | |||||||| ||||| ||||| ||||| |||| | |||||||||||||| Sbjct: 1090 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1149 Query: 386 catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 445 ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || || Sbjct: 1150 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1209 Query: 446 acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 505 ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 1210 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1269 Query: 506 ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 562 ||| ||||| ||||| || || ||||| || || ||| | ||||||||||||||||| Sbjct: 1270 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1326 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 109 actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 168 |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || ||||||| Sbjct: 873 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 932 Query: 169 agcatga 175 ||||||| Sbjct: 933 agcatga 939
>emb|BX823363.1|CNS0A4RL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS27ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1928 Score = 153 bits (77), Expect = 9e-34 Identities = 242/297 (81%) Strand = Plus / Plus Query: 266 ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 325 |||||||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||| Sbjct: 1026 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1085 Query: 326 tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 385 |||||| | |||||||| ||||| ||||| ||||| |||| | |||||||||||||| Sbjct: 1086 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1145 Query: 386 catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 445 ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || || Sbjct: 1146 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1205 Query: 446 acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 505 ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 1206 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1265 Query: 506 ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 562 ||| ||||| ||||| || || ||||| || || ||| | ||||||||||||||||| Sbjct: 1266 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1322 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 109 actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 168 |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || ||||||| Sbjct: 869 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 928 Query: 169 agcatga 175 ||||||| Sbjct: 929 agcatga 935
>gb|BT001915.1| Arabidopsis thaliana clone C105149 putative mitochondrial processing peptidase (At3g02090) mRNA, complete cds Length = 1627 Score = 153 bits (77), Expect = 9e-34 Identities = 242/297 (81%) Strand = Plus / Plus Query: 266 ttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgt 325 |||||||||||||||||| ||||| |||||||| ||| | |||||||| ||||||||||| Sbjct: 960 ttttactggttctgaggtccgaatgattgatgacgacctaccccttgcacaatttgctgt 1019 Query: 326 tgccttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaac 385 |||||| | |||||||| ||||| ||||| ||||| |||| | |||||||||||||| Sbjct: 1020 tgcctttgagggagcatcttggactgatccagattccgttgctcttatggttatgcaaac 1079 Query: 386 catgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgt 445 ||| | ||||| |||||||| | || ||| || || || ||| ||||||| || || Sbjct: 1080 tatgttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgac 1139 Query: 446 acagagagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataa 505 ||||| || || || ||||| ||||| || || ||||||||||||||||| ||||| || Sbjct: 1140 ccagagggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaa 1199 Query: 506 ggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgattt 562 ||| ||||| ||||| || || ||||| || || ||| | ||||||||||||||||| Sbjct: 1200 ggatactggactgttcggcgtttatgcagttgccaaggccgattgcttggatgattt 1256 Score = 46.1 bits (23), Expect = 0.15 Identities = 56/67 (83%) Strand = Plus / Plus Query: 109 actacattcaaaatcattacacggcttctagaatggttattactgctgctggtgctgtta 168 |||||||| | | ||| ||||| ||||| || ||||| ||| ||||||| || ||||||| Sbjct: 803 actacattaagactcactacactgcttccaggatggtgattgctgctgcaggagctgtta 862 Query: 169 agcatga 175 ||||||| Sbjct: 863 agcatga 869
>gb|AY656733.1| Vitis vinifera clone 5-3 powdery mildew-resistant-like mRNA, partial sequence Length = 394 Score = 113 bits (57), Expect = 8e-22 Identities = 165/201 (82%) Strand = Plus / Minus Query: 242 gttggttgctaagcagccagccatttttactggttctgaggtacgaatcattgatgatga 301 ||||||||| || ||||||| | |||||||||||||||||| | || ||||||||||| Sbjct: 213 gttggttgcgaaagagccagctagttttactggttctgaggtcaggattattgatgatga 154 Query: 302 catgccccttgctcaatttgctgttgccttcaatggagcatcctggacagatcccgattc 361 | || || || |||||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct: 153 tgtcccactcgcacaatttgctgttgcattcaacggagcctcctggacagatcccgattc 94 Query: 362 tattgcattaatggttatgcaaaccatgcttggttcctggaacaagagtgctggaggagg 421 ||| | || ||||| ||||| | || || ||||| ||||| |||| | |||| ||||| Sbjct: 93 cattcctttgatggtcatgcagagtatactgggttcttggaataagaattctggtggagg 34 Query: 422 gaagcacatgggttcggagct 442 ||||||||||| || ||||| Sbjct: 33 aaagcacatggggtcagagct 13 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 138 agaatggttattactgctgctggtgctgttaagca 172 |||||||||||| ||||||||||||||||| |||| Sbjct: 317 agaatggttatttctgctgctggtgctgtttagca 283
>emb|BX825296.1|CNS0A4ZN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1939 Score = 109 bits (55), Expect = 1e-20 Identities = 233/291 (80%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 270 actggttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgcc 329 |||||||||||||| ||||| |||||||| ||| | ||||| || ||||||||||||||| Sbjct: 1015 actggttctgaggtccgaatgattgatgacgacctacccctagcacaatttgctgttgcc 1074 Query: 330 ttcaatggagcatcctggacagatcccgattctattgcattaatggttatgcaaaccatg 389 || | |||||||| ||||| ||||| ||||| || || ||||||||||| || ||| Sbjct: 1075 tttgagggagcatcttggactgatccagattc-cttttttttatggttatgcatactatg 1133 Query: 390 cttggttcctggaacaagagtgctggaggagggaagcacatgggttcggagcttgtacag 449 | ||||| |||||||| | || ||| || || || ||| ||||||| || || ||| Sbjct: 1134 ttgggttcgtggaacaaaaatgttggtggtggaaaacacgtgggttctgacctgacccag 1193 Query: 450 agagtagcaatcaatgacatagctgagagtataatggcattcaacacaaactataaggac 509 || || || || ||||| ||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1194 agggttgccattaatgaaatagcagaaagcataatggcattcaacactaactacaaggat 1253 Query: 510 actggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggatgat 560 ||||| ||||| || || ||||| || || ||| | ||||||||||||||| Sbjct: 1254 actggactgttcggcgtttatgcagttgccaaggccgattgcttggatgat 1304
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 87.7 bits (44), Expect = 4e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 275 ttctgaggtacgaatcattgatgatgacatgccccttgctcaatttgctgttgccttcaa 334 |||| |||| ||||| |||||||| ||| | |||||||| ||||||||||||||||| | Sbjct: 42084 ttctcaggtccgaatgattgatgacgacctaccccttgcacaatttgctgttgcctttga 42025 Query: 335 tggagcatcctggacagatcccgattctattgcattaatggttatgcaaaccatgcttgg 394 |||||||| ||||| ||||| ||||| |||| | |||||||||||||| ||| | || Sbjct: 42024 gggagcatcttggactgatccagattccgttgctcttatggttatgcaaactatgttggg 41965 Query: 395 ttcctggaacaa 406 ||| |||||||| Sbjct: 41964 ttcgtggaacaa 41953 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 462 aatgacatagctgagagtataatggcattcaacacaaactataaggacactggcctgtt 520 ||||| ||||| || || ||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 41805 aatgaaatagcagaaagcataatggcattcaacactaactacaaggatactggactgtt 41747
>gb|DQ284488.1| Solanum tuberosum clone 028E08 mitochondrial processing peptidase-like mRNA, complete cds; nuclear gene for mitochondrial product Length = 1761 Score = 75.8 bits (38), Expect = 2e-10 Identities = 239/306 (78%) Strand = Plus / Plus Query: 258 ccagccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaa 317 ||||| |||||||| ||||| ||||| | | |||||||||||||| || | || ||| Sbjct: 1007 ccagcaatttttacaggttcagaggttagggtaattgatgatgacattccgttggcacaa 1066 Query: 318 tttgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatggtt 377 ||||||||||| || | || ||| | ||||| ||||| ||| | ||| | | ||||| Sbjct: 1067 tttgctgttgcttttcaaggggcaccatggactgatccagatgccattccgctgatggta 1126 Query: 378 atgcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcg 437 |||||| ||||||| || | ||||| || | ||| ||||||||||| |||||||| || Sbjct: 1127 atgcaatccatgctgggaacttggaataaaaatgccggaggagggaaacacatgggctcc 1186 Query: 438 gagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaacaca 497 || || | ||| || || || || ||||| |||||||||| || ||| | || ||||| Sbjct: 1187 gatctggcacaaagtgttgccattaatgaactagctgagagcatgatgtcttttaacacc 1246 Query: 498 aactataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggat 557 || |||||||| ||||| ||||| || ||||||||||| || ||||||||||| ||| | Sbjct: 1247 aattataaggatactggtctgttcggcgtgtatgctgttgcaaagcctgattgtttgagt 1306 Query: 558 gatttg 563 |||||| Sbjct: 1307 gatttg 1312
>gb|BT013728.1| Lycopersicon esculentum clone 132587R, mRNA sequence Length = 1778 Score = 67.9 bits (34), Expect = 4e-08 Identities = 238/306 (77%) Strand = Plus / Plus Query: 258 ccagccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaa 317 ||||| |||||||| ||||| ||||| | | |||||||||||||| || | || ||| Sbjct: 1022 ccagcaatttttacaggttcagaggttagggtaattgatgatgacattccattggcacaa 1081 Query: 318 tttgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatggtt 377 ||||||||||| || | || ||| | ||||| ||||| ||| | ||| || | ||||| Sbjct: 1082 tttgctgttgcttttcaaggggcaccgtggactgatccagatgccattccactgatggta 1141 Query: 378 atgcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcg 437 |||||| ||||||| || | ||||| || | ||| ||||||||||| |||||||| || Sbjct: 1142 atgcaatccatgctgggcacttggaataaaaatgccggaggagggaaacacatgggctcc 1201 Query: 438 gagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaacaca 497 || || | ||| || || | || ||||| | |||||||| || ||| | || ||||| Sbjct: 1202 gatctggcacaaagtgttggcattaatgaacttgctgagagcatgatgtcttttaacacc 1261 Query: 498 aactataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggat 557 ||||||||||| ||||| |||| || ||||||||||| || ||||||||||| ||| | Sbjct: 1262 aactataaggatactggtttgttcggcgtgtatgctgttgcaaagcctgattgtttgagt 1321 Query: 558 gatttg 563 |||||| Sbjct: 1322 gatttg 1327
>emb|X80235.1|STBIIMPP S.tuberosum mRNA for beta-II MPP Length = 1848 Score = 67.9 bits (34), Expect = 4e-08 Identities = 238/306 (77%) Strand = Plus / Plus Query: 258 ccagccatttttactggttctgaggtacgaatcattgatgatgacatgccccttgctcaa 317 ||||| |||||||| ||||| ||||| | | |||||||||||||| || | || ||| Sbjct: 1006 ccagcaatttttacaggttcagaggttagggtaattgatgatgacattccgttggcacaa 1065 Query: 318 tttgctgttgccttcaatggagcatcctggacagatcccgattctattgcattaatggtt 377 ||||||||||| || | || ||| | ||||| ||||| ||| | ||| | | ||||| Sbjct: 1066 tttgctgttgcttttcaaggggcaccatggactgatccagatgccattccgctgatggta 1125 Query: 378 atgcaaaccatgcttggttcctggaacaagagtgctggaggagggaagcacatgggttcg 437 |||||| ||||||| || | ||||| || | ||| ||||||||||| |||||||| || Sbjct: 1126 atgcaatccatgctgggaacttggaataaaaatgccggaggagggaaacacatgggctcc 1185 Query: 438 gagcttgtacagagagtagcaatcaatgacatagctgagagtataatggcattcaacaca 497 || || | ||| || || || || ||||| |||||||||| || ||| | || ||||| Sbjct: 1186 gatctggcacaaagtgttgccattaatgaactagctgagagcatgatgtcttttaacacc 1245 Query: 498 aactataaggacactggcctgtttggtgtgtatgctgtcgctaagcctgattgcttggat 557 || |||||||| ||||| ||||| || ||||||||||| || ||| ||||||| ||| | Sbjct: 1246 aattataaggatactggtctgttcggcgtgtatgctgttgcaaagtctgattgtttgagt 1305 Query: 558 gatttg 563 |||||| Sbjct: 1306 gatttg 1311
>emb|Z81548.1|CEF54F12 Caenorhabditis elegans Cosmid F54F12, complete sequence Length = 32715 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 caactgcattccagtatacttc 43 |||||||||||||||||||||| Sbjct: 19250 caactgcattccagtatacttc 19229
>ref|NM_067308.1| Caenorhabditis elegans F54F12.1 (F54F12.1) mRNA, complete cds Length = 3654 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 caactgcattccagtatacttc 43 |||||||||||||||||||||| Sbjct: 50 caactgcattccagtatacttc 71
>emb|AJ538971.1|NTA538971 Nicotiana tabacum cDNA-AFLP-fragment BT31-M2-028 Length = 274 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 618 gatgttattcgtgcacgtaatcagct 643 ||||| |||||||||||||||||||| Sbjct: 90 gatgtcattcgtgcacgtaatcagct 65
>gb|AC124191.4| Mus musculus BAC clone RP23-275E4 from 18, complete sequence Length = 203003 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 144 gttattactgctgctggtgctg 165 |||||||||||||||||||||| Sbjct: 91293 gttattactgctgctggtgctg 91314
>emb|AL136146.10| Human DNA sequence from clone RP5-916O11 on chromosome 11p12-13, complete sequence Length = 106073 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 cctggaacaagagtgctggag 417 ||||||||||||||||||||| Sbjct: 76497 cctggaacaagagtgctggag 76477
>gb|AC026269.26| Homo sapiens chromosome 11, clone RP11-745E9, complete sequence Length = 173145 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 cctggaacaagagtgctggag 417 ||||||||||||||||||||| Sbjct: 12819 cctggaacaagagtgctggag 12799
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 aatcattgatgatgacatgcc 307 ||||||||||||||||||||| Sbjct: 1531145 aatcattgatgatgacatgcc 1531165
>dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN9 Length = 61001 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 tgaccctacaacaaccaacat 241 ||||||||||||||||||||| Sbjct: 40444 tgaccctacaacaaccaacat 40424
>ref|XM_511581.1| PREDICTED: Pan troglodytes hypothetical protein XP_511581 (LOC454765), mRNA Length = 1261 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ggttattactgctgctggtg 162 |||||||||||||||||||| Sbjct: 695 ggttattactgctgctggtg 714
>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence Length = 265797 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tagaatggttattactgctg 156 |||||||||||||||||||| Sbjct: 116336 tagaatggttattactgctg 116317
>gb|AC154426.2| Mus musculus BAC clone RP24-199A21 from chromosome 14, complete sequence Length = 210568 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 585 atgagcaaattatcatacag 604 |||||||||||||||||||| Sbjct: 103805 atgagcaaattatcatacag 103824
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ttactgctgctggtgctgtt 167 |||||||||||||||||||| Sbjct: 1693966 ttactgctgctggtgctgtt 1693985
>gb|AC120877.15| Mus musculus chromosome 6, clone RP24-548D19, complete sequence Length = 228206 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aagtctatcaccaaaaagga 100 |||||||||||||||||||| Sbjct: 91145 aagtctatcaccaaaaagga 91164
>gb|AC110247.9| Mus musculus chromosome 1, clone RP23-254H20, complete sequence Length = 209326 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 acacggcttctagaatggtt 146 |||||||||||||||||||| Sbjct: 138244 acacggcttctagaatggtt 138263
>gb|AC119846.14| Mus musculus chromosome 1, clone RP23-45A13, complete sequence Length = 242338 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 acacggcttctagaatggtt 146 |||||||||||||||||||| Sbjct: 3783 acacggcttctagaatggtt 3802
>gb|AC101729.8| Mus musculus chromosome 1, clone RP23-362J21, complete sequence Length = 177946 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aagcagccagccatttttac 271 |||||||||||||||||||| Sbjct: 162482 aagcagccagccatttttac 162463
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ttactgctgctggtgctgtt 167 |||||||||||||||||||| Sbjct: 5590190 ttactgctgctggtgctgtt 5590171
>gb|AC102663.6| Mus musculus chromosome 6, clone RP23-244M15, complete sequence Length = 223742 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aagtctatcaccaaaaagga 100 |||||||||||||||||||| Sbjct: 211296 aagtctatcaccaaaaagga 211315
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 atcattgatgatgacatgcc 307 |||||||||||||||||||| Sbjct: 61095 atcattgatgatgacatgcc 61114
>emb|AL590995.14| Human DNA sequence from clone RP11-475B22 on chromosome 6, complete sequence Length = 113362 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 agagatgagcaaattatcat 600 |||||||||||||||||||| Sbjct: 75538 agagatgagcaaattatcat 75557
>emb|AL391821.7| Human DNA sequence from clone RP11-212B22 on chromosome Xq21.2-22.2 Contains the 3' end of the DIAPH2 gene for diaphanous (Drosophila, homolog) 2 and the 5' end of a novel gene (EPAG), complete sequence Length = 158408 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 acaggcaaaagagctgttcaaaac 211 |||||||||||| ||||||||||| Sbjct: 29558 acaggcaaaagacctgttcaaaac 29581
>ref|XM_966541.1| PREDICTED: Tribolium castaneum similar to CG5502-PA (LOC660298), mRNA Length = 1369 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 gatgacatgccccttgctca 316 |||||||||||||||||||| Sbjct: 504 gatgacatgccccttgctca 485
>emb|X72832.1|SEDEXB S.equisimilis dexb, abc, lrp, skc, rel genes and ORF1 Length = 8931 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 ttggatgatttggcttttgc 571 |||||||||||||||||||| Sbjct: 3306 ttggatgatttggcttttgc 3287
>emb|BX004761.10| Zebrafish DNA sequence from clone DKEY-11I10 in linkage group 20 Contains a novel gene and a CpG island, complete sequence Length = 132841 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tgccttcaatggagcatcct 345 |||||||||||||||||||| Sbjct: 38716 tgccttcaatggagcatcct 38697
>emb|BX296553.6| Zebrafish DNA sequence from clone CH211-222G19 in linkage group 8, complete sequence Length = 108215 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tgccttcaatggagcatcct 345 |||||||||||||||||||| Sbjct: 52958 tgccttcaatggagcatcct 52977
>gb|AC022819.8| Homo sapiens chromosome 15, clone RP11-41I15, complete sequence Length = 193803 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ctgctgctggtgctgttaagcatg 174 ||||||||| |||||||||||||| Sbjct: 42734 ctgctgctgctgctgttaagcatg 42711
>gb|AC037479.9| Homo sapiens chromosome 15, clone RP11-616M17, complete sequence Length = 177761 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ctgctgctggtgctgttaagcatg 174 ||||||||| |||||||||||||| Sbjct: 77334 ctgctgctgctgctgttaagcatg 77357
>gb|AC010314.6| Homo sapiens chromosome 5 clone CTB-83L16, complete sequence Length = 124861 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 attcaaaatcattacacggcttct 137 ||||||||||||| |||||||||| Sbjct: 74311 attcaaaatcattccacggcttct 74334
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gagctgttcaaaacgctgcc 217 |||||||||||||||||||| Sbjct: 1290157 gagctgttcaaaacgctgcc 1290138
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ttgcttggatgatttggctt 567 |||||||||||||||||||| Sbjct: 3363400 ttgcttggatgatttggctt 3363419
>ref|XM_575971.1| PREDICTED: Rattus norvegicus similar to hypothetical protein A530045M11 (LOC500597), mRNA Length = 2769 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgttgccttcaatggagcat 342 |||||||||||||||||||| Sbjct: 2257 tgttgccttcaatggagcat 2238
>dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152H07, full insert sequence Length = 4125 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ttgcttggatgatttggctt 567 |||||||||||||||||||| Sbjct: 1318 ttgcttggatgatttggctt 1337
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ttactgctgctggtgctgtt 167 |||||||||||||||||||| Sbjct: 57109 ttactgctgctggtgctgtt 57090
>gb|AC101789.9| Mus musculus chromosome 1, clone RP24-150F11, complete sequence Length = 150474 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 aagcagccagccatttttac 271 |||||||||||||||||||| Sbjct: 134926 aagcagccagccatttttac 134945
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ttgcttggatgatttggctt 567 |||||||||||||||||||| Sbjct: 3363345 ttgcttggatgatttggctt 3363364
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 ttgcttggatgatttggctt 567 |||||||||||||||||||| Sbjct: 42453 ttgcttggatgatttggctt 42472 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,973,696 Number of Sequences: 3902068 Number of extensions: 5973696 Number of successful extensions: 112216 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 111874 Number of HSP's gapped (non-prelim): 335 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
