ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39k05 |
|---|---|
| Clone Library Name | barley_pub |
>FADS_BRARE (Q9DEX7) Delta-5/delta-6 fatty acid desaturase (EC 1.14.19.-)| Length = 444 Score = 41.2 bits (95), Expect = 0.003 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = +2 Query: 143 QSGWIGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHHISCN 298 Q+GW+ HD GH + +N L+ L G WW H HH N Sbjct: 174 QAGWLQHDFGHLSVFKTSGMNHLVHKFVIGHLKGASAGWWNHRHFQHHAKPN 225
>LLCD_SYNY3 (Q08871) Linoleoyl-CoA desaturase (EC 1.14.19.3)| (Delta(6)-desaturase) Length = 359 Score = 36.2 bits (82), Expect = 0.092 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%) Frame = +2 Query: 155 IGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHN-THHISCN 298 +GHD+ H+ +S+P +NR+L + GL W++ HN HH N Sbjct: 86 VGHDANHNAYSSNPHINRVLGMTYD--FVGLSSFLWRYRHNYLHHTYTN 132
>DEXT_STRDO (P39653) Dextranase precursor (EC 3.2.1.11)| (Alpha-1,6-glucan-6-glucanohydrolase) Length = 1337 Score = 35.0 bits (79), Expect = 0.20 Identities = 20/69 (28%), Positives = 29/69 (42%) Frame = -1 Query: 259 PGDAEAGEAVPGDHLQEAVERGVTGDLVVAGVMANPARLDPDEANEAAGEHVGPGAGTGE 80 P +A A G + +A + V A PA++D EAN+AA + V P + E Sbjct: 846 PAQDQAAPAEQGQAINQAESPATEPEAEVTPATAEPAKVDAPEANQAADQAVSPEPASQE 905 Query: 79 DAVEGDAEE 53 A E Sbjct: 906 QAASQSQPE 914
>MEA1_PIG (Q95313) Male-enhanced antigen 1 (Mea-1) (Fragment)| Length = 113 Score = 33.9 bits (76), Expect = 0.45 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = -1 Query: 181 LVVAGVMANPARLDPDEANEAAGEHVGPGAGTGEDAVEGDAEEHRHCDEQELGGGP 14 +V+ G + P R+ P++ E G H GP GTG+ + E EE ++E G GP Sbjct: 4 VVLGGDIMGPERIFPNQTEEL-GPHQGPTEGTGDWSSEEPEEE-----QEETGTGP 53
>MEA1_BOVIN (Q29407) Male-enhanced antigen 1 (Mea-1)| Length = 174 Score = 33.9 bits (76), Expect = 0.45 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = -1 Query: 181 LVVAGVMANPARLDPDEANEAAGEHVGPGAGTGEDAVEGDAEEHRHCDEQELGGGP 14 +V+ G P R+ P++ E G H GP GTG+ + E EE ++E G GP Sbjct: 4 VVLGGDTMGPERIFPNQTEEL-GPHQGPTEGTGDWSSEEPEEE-----QEETGAGP 53
>MEA1_MOUSE (Q64327) Male-enhanced antigen 1 (Mea-1)| Length = 174 Score = 33.1 bits (74), Expect = 0.78 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = -1 Query: 181 LVVAGVMANPARLDPDEANEAAGEHVGPGAGTGEDAVEGDAEEHRHCDEQELGGGP 14 +V+ G P R+ P++ E G H GP GTG+ + E EE ++E G GP Sbjct: 4 VVLGGDTMGPERIFPNQT-EDLGPHQGPTEGTGDWSSEEPEEE-----QEETGAGP 53
>FD6E2_SOYBN (P48631) Omega-6 fatty acid desaturase, endoplasmic reticulum| isozyme 2 (EC 1.14.19.-) Length = 383 Score = 32.7 bits (73), Expect = 1.0 Identities = 15/62 (24%), Positives = 32/62 (51%) Frame = +2 Query: 116 GGLIGFIWIQSGWIGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHHISC 295 G ++ +W+ I H+ GHH + + L+ ++ ++ + L + WK++H HH + Sbjct: 94 GCILTGVWV----IAHECGHHAFSDYQLLDDIVGLILHSALL-VPYFSWKYSHRRHHSNT 148 Query: 296 NS 301 S Sbjct: 149 GS 150
>FAD3E_SOYBN (P48625) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) Length = 380 Score = 32.7 bits (73), Expect = 1.0 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +2 Query: 155 IGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHH 286 +GHD GH + P LN L+ + + + + W+ +H THH Sbjct: 98 LGHDCGHGSFSDSPLLNSLVGHILHSSIL-VPYHGWRISHRTHH 140
>FAD3E_BRANA (P48624) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) Length = 383 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Frame = +2 Query: 68 LYCVLACSSTGAHMFAGGLIGFIWIQSG---W----IGHDSGHHQITSHPALNRLLQVVS 226 ++ V A + + + L W+ G W +GHD GH + P LN ++ + Sbjct: 60 IFAVAALAMAAVYFDSWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHIL 119 Query: 227 GNCLTGLGIAWWKFNHNTHH 286 + + + W+ +H THH Sbjct: 120 HSFIL-VPYHGWRISHRTHH 138
>MEA1_HUMAN (Q16626) Male-enhanced antigen 1 (Mea-1)| Length = 172 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -1 Query: 181 LVVAGVMANPARLDPDEANEAAGEHVGPGAGTGEDAVEGDAEEHRHCDEQELGGGP 14 +V+ G P R+ P++ E H GP GTG+ + E EE ++E G GP Sbjct: 4 VVLGGDTMGPERIFPNQTEELG--HQGPSEGTGDWSSEEPEEE-----QEETGSGP 52
>FAD12_CREAL (O81931) Delta(12) fatty acid dehydrogenase (EC 1.14.99.33)| (Crepenynate synthase) (Delta-12 fatty acid acetylenase) Length = 375 Score = 32.3 bits (72), Expect = 1.3 Identities = 15/56 (26%), Positives = 29/56 (51%) Frame = +2 Query: 134 IWIQSGWIGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHHISCNS 301 +W+ IGH+ GHH + + ++ + + + L +W K++H HH + NS Sbjct: 93 LWV----IGHECGHHAFSDYQWVDDTVGFILHSFLMTPYFSW-KYSHRNHHANTNS 143
>MAGD1_HUMAN (Q9Y5V3) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (MAGE tumor antigen CCF) Length = 778 Score = 32.0 bits (71), Expect = 1.7 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = -2 Query: 177 WWPESWPIQPDWIQMKP---MRPPAN 109 W P WPI PDW ++P +RP N Sbjct: 428 WIPADWPIPPDWQNLRPSPNLRPSPN 453
>FAD3C_RICCO (P48619) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 460 Score = 32.0 bits (71), Expect = 1.7 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = +2 Query: 155 IGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHH 286 +GHD GH +++P LN ++ + + + + W+ +H THH Sbjct: 175 LGHDCGHGSFSNNPKLNSVVGHLLHSSIL-VPYHGWRISHRTHH 217
>FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) (Fragment) Length = 404 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%) Frame = +2 Query: 137 WIQSG---W----IGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHH 286 WI G W +GHD GH ++ P LN ++ + + + + W+ +H THH Sbjct: 106 WIAQGTMFWALFVLGHDCGHGSFSNDPRLNSVVGHLLHSSIL-VPYHGWRISHRTHH 161
>FAD3C_SESIN (P48620) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 447 Score = 32.0 bits (71), Expect = 1.7 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +2 Query: 155 IGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHH 286 +GHD GH ++ P LN ++ + + + + W+ +H THH Sbjct: 165 LGHDCGHGSFSNDPKLNSVVGHILHSSIL-VPYHGWRISHRTHH 207
>MAGD1_PIG (Q6ITT4) Melanoma-associated antigen D1 (MAGE-D1 antigen)| Length = 784 Score = 31.6 bits (70), Expect = 2.3 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%) Frame = -2 Query: 177 WWPESWPIQPDWIQMKP---MRPPAN 109 W P WP+ PDW ++P +RP N Sbjct: 434 WIPTDWPVPPDWQNLRPSPNLRPSPN 459
>FAD3D_ARATH (P48622) Temperature-sensitive omega-3 fatty acid desaturase,| chloroplast precursor (EC 1.14.19.-) Length = 435 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +2 Query: 155 IGHDSGHHQITSHPALNRLLQVVSGNCLTG---LGIAWWKFNHNTHH 286 +GHD GH ++ P LN V+G+ L + W+ +H THH Sbjct: 154 LGHDCGHGSFSNDPRLNS----VAGHLLHSSILVPYHGWRISHRTHH 196
>RL12_HALMA (P15772) 50S ribosomal protein L12P ('A' type) (Hmal12)|
Length = 115
Score = 31.2 bits (69), Expect = 2.9
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 217 LQEAVERGVTGDLVVAGVMANPARLDPDEANEAAGEHVGPGAGTGEDAVEGDAEE 53
++EAV++ + +G A PA D DEA+EA E A G D + + +E
Sbjct: 50 IEEAVDQAAAAPVPASGGAAAPAEGDADEADEADEEAEEEAADDGGDDDDDEDDE 104
>FAD3C_ARATH (P46310) Omega-3 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 446 Score = 31.2 bits (69), Expect = 2.9 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +2 Query: 155 IGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHH 286 +GHD GH ++ P LN ++ + + + + W+ +H THH Sbjct: 161 LGHDCGHGSFSNDPKLNSVVGHLLHSSIL-VPYHGWRISHRTHH 203
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 31.2 bits (69), Expect = 2.9 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = -3 Query: 665 TAHAESP*SQSLQAQKPPSPT---NSAGKTPARGTKPRTRPHRRSPANAAAPSFV**GTR 495 T SP + PPSP NS PA T P+ RR+P N PS G Sbjct: 1033 TGEPASPHDSLGHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGNPSNP--GPP 1090 Query: 494 LTALEDLSLQIPSPGKMSSAGS*RR 420 T L + PS + +SA + R+ Sbjct: 1091 KTPENSLIVTNPSSTQPNSAKTARK 1115
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 31.2 bits (69), Expect = 2.9 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Frame = -3 Query: 665 TAHAESP*SQSLQAQKPPSPT---NSAGKTPARGTKPRTRPHRRSPANAAAPSFV**GTR 495 T SP + PPSP NS PA T P+ RR+P N PS G Sbjct: 985 TGEPASPHDSLGHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGDPSNP--GPP 1042 Query: 494 LTALEDLSLQIPSPGKMSSAGS*RR 420 T L + PS + +SA + R+ Sbjct: 1043 KTPENSLIVTNPSSTQPNSAKTARK 1067
>PACC_NEUCR (Q7RVQ8) pH-response transcription factor pacC/RIM101| Length = 621 Score = 30.8 bits (68), Expect = 3.8 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 5/57 (8%) Frame = -3 Query: 665 TAHAESP*SQSLQAQKPPSPTNSA-----GKTPARGTKPRTRPHRRSPANAAAPSFV 510 TA A S + A KP + +NS+ G TPA T P T + +PA A S V Sbjct: 40 TAPAASANGTAANAMKPEASSNSSNSASNGTTPAPSTTPTTASNSSAPAAAQDESLV 96
>DMBT1_MOUSE (Q60997) Deleted in malignant brain tumors 1 protein precursor| (CRP-ductin) (Vomeroglandin) Length = 2085 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 15/56 (26%) Frame = +2 Query: 59 CVALYCVLACSSTGAHMFA-------------GGLIGFIWIQS--GWIGHDSGHHQ 181 C L C LA S+ G+ F GG ++W S GW+ H+ GHH+ Sbjct: 779 CRQLGCGLAVSAPGSARFGQGTGPIVMDDVACGGYEDYLWRCSHRGWLSHNCGHHE 834 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 15/56 (26%) Frame = +2 Query: 59 CVALYCVLACSSTGAHMFA-------------GGLIGFIWIQS--GWIGHDSGHHQ 181 C L C LA S+ G+ F GG ++W S GW+ H+ GHH+ Sbjct: 640 CRQLGCGLAVSAPGSARFGQGTGPIVMDDVACGGYEDYLWRCSHRGWLSHNCGHHE 695 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 15/56 (26%) Frame = +2 Query: 59 CVALYCVLACSSTGAHMFA-------------GGLIGFIWIQS--GWIGHDSGHHQ 181 C L C LA S+ G+ F GG ++W S GW+ H+ GHH+ Sbjct: 501 CRQLGCGLAVSAPGSARFGQGTGPIVMDDVACGGYEDYLWRCSHRGWLSHNCGHHE 556
>HXA3_HUMAN (O43365) Homeobox protein Hox-A3 (Hox-1E)| Length = 443 Score = 30.8 bits (68), Expect = 3.8 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -3 Query: 626 AQKPPSPTNSAGKTPARGTKPRTRPHRRSPANAA 525 A +PP+PT +A P+ + P+ + +PANAA Sbjct: 108 APQPPAPTPAAPPPPSSASPPQNASNNPTPANAA 141
>FAD3E_ARATH (P48623) Omega-3 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) Length = 386 Score = 30.4 bits (67), Expect = 5.0 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +2 Query: 155 IGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHH 286 +GHD GH + P LN ++ + + + + W+ +H THH Sbjct: 99 LGHDCGHGSFSDIPLLNSVVGHILHSFIL-VPYHGWRISHRTHH 141
>NO75_SOYBN (P08297) Early nodulin 75 precursor (N-75) (NGM-75)| Length = 309 Score = 30.4 bits (67), Expect = 5.0 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +1 Query: 91 QHRGPHVRRRPHWLHLDPVGLDWP*LRPPPDHQSPRAQPPP 213 Q + PH + P + P +PPP+HQ P +PPP Sbjct: 217 QEKPPHEKPPPEYQP--------PHEKPPPEHQPPHEKPPP 249
>MAGD1_MOUSE (Q9QYH6) Melanoma-associated antigen D1 (MAGE-D1 antigen)| (Neurotrophin receptor-interacting MAGE homolog) (Dlxin-1) Length = 775 Score = 30.4 bits (67), Expect = 5.0 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 Query: 177 WWPESWPIQPDWIQMKP 127 W P WPI PDW ++P Sbjct: 425 WIPADWPIPPDWQNLRP 441
>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)| Length = 1090 Score = 30.4 bits (67), Expect = 5.0 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 647 P*SQSLQAQKPPSPTNSAGKTPARGTKPRTRPHRRSPANAAAPSF 513 P + Q PP P + G P+RG P+ P R +P PSF Sbjct: 197 PLPPTFQPGAPPGPPPAGGPPPSRGPAPQKTPPRAAP----PPSF 237
>CSP_PLACC (P08673) Circumsporozoite protein precursor (CS)| Length = 398 Score = 30.0 bits (66), Expect = 6.6 Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = -1 Query: 247 EAGEAVPGDHLQEAVERGVTGDLVVAGVMANPARLDPDEANEAAGEHVGPGAG-TGEDAV 71 EAG G G G+ AG N A N AAGE GAG G +A Sbjct: 204 EAGNNAAGGAAGNNAAAGEAGNNAAAGAAGNNAAAGAAGNNAAAGEAGAGGAGRAGNNAA 263 Query: 70 EGDA 59 G+A Sbjct: 264 AGEA 267
>FAD6E_ARATH (P46313) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) (Delta-12 desaturase) Length = 383 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +2 Query: 116 GGLIGFIWIQSGWIGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHHISC 295 G ++ IW+ I H+ GHH + + L+ + ++ + L + WK++H HH + Sbjct: 94 GCVLTGIWV----IAHECGHHAFSDYQWLDDTVGLIFHSFLL-VPYFSWKYSHRRHHSNT 148 Query: 296 NS 301 S Sbjct: 149 GS 150
>OXAA_MYCTU (P65626) Membrane protein oxaA| Length = 366 Score = 30.0 bits (66), Expect = 6.6 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -3 Query: 629 QAQKPPSPTNSAGKTPARGTKPRTRPHRRSPANAAAPS 516 +A+K + A PA G KP+ P NAAAP+ Sbjct: 282 EAKKQEAVRRRAANAPAPGAKPKRSPKTAPATNAAAPT 319
>OXAA_MYCBO (P65627) Membrane protein oxaA| Length = 366 Score = 30.0 bits (66), Expect = 6.6 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -3 Query: 629 QAQKPPSPTNSAGKTPARGTKPRTRPHRRSPANAAAPS 516 +A+K + A PA G KP+ P NAAAP+ Sbjct: 282 EAKKQEAVRRRAANAPAPGAKPKRSPKTAPATNAAAPT 319
>VP40_EBV (P03234) Capsid protein P40 (Virion structural protein BVRF2)| (EC-RF3 and EC-RF3A) [Contains: Capsid protein VP24 (Assemblin) (Protease) (EC 3.4.21.97); Capsid protein VP22A; C-terminal peptide] Length = 605 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = +1 Query: 88 FQHRGPHVRRRPHWLHLDPVGLDWP*LRPPPDHQSPRAQPPPAG 219 + H GP+ +PH + P + P PP HQ+ +AQPPP G Sbjct: 479 YTHSGPY-GFQPHQSYEVPRYVPHP-PPPPTSHQAAQAQPPPPG 520
>FAD6C_SOYBN (P48628) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 424 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 11/70 (15%) Frame = +2 Query: 122 LIGFIWIQSGW-------IGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAW----WKF 268 L+ W+ +G IGHD H +S N+L++ + G L + + + W+F Sbjct: 145 LLPLAWVWTGTAITGFFVIGHDCAHRSFSS----NKLVEDIVGT-LAFMPLIYPYEPWRF 199 Query: 269 NHNTHHISCN 298 H+ HH N Sbjct: 200 KHDRHHAKTN 209
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 30.0 bits (66), Expect = 6.6 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -1 Query: 172 AGVMANPARLDP-DEANEAAGEHVGPGAGTGEDAVEGDAEEHRHCDEQELGGGPTRSK 2 A V A PAR P A+ AAG PG G G + GD H H + L P ++ Sbjct: 217 AAVAAAPARRGPASPASPAAGPVSAPGGG-GAPSAGGDRGRHHHQHREPLLDEPAAAR 273
>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 581 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -3 Query: 668 RTAHAESP*SQSLQAQKPPSPTNSAGKTPARGTKPRTRPHRRSPANAA 525 RT A + +Q+ A PP + A +PA+ + T P R SPA A+ Sbjct: 13 RTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQAS 60
>NEUM_BOVIN (P06836) Neuromodulin (Axonal membrane protein GAP-43)| (Growth-associated protein 43) (Calmodulin-binding protein P-57) Length = 239 Score = 30.0 bits (66), Expect = 6.6 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 3/87 (3%) Frame = -1 Query: 256 GDAEAGEAVPGDHLQEAVERGVT---GDLVVAGVMANPARLDPDEANEAAGEHVGPGAGT 86 GDA A EA + + AV G G+ A A P+E AGE G G Sbjct: 57 GDAPAAEAEANEKDEAAVAEGTEKKEGEGSTPAEAAPGAGPKPEEKTGKAGETPKKGEGA 116 Query: 85 GEDAVEGDAEEHRHCDEQELGGGPTRS 5 + A E A + E++ G T S Sbjct: 117 PDAATEQAAPQAPAPSEEKAGSAETES 143
>CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic linker-associated| protein 1) (Multiple asters homolog 1) Length = 1538 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 611 SPTNSAGKTPARGTKPRTRPHRRSPANAA 525 SP+N+ G+TP+R T RT P SP N + Sbjct: 1091 SPSNTIGRTPSRHTSSRTSP-LTSPTNCS 1118
>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2| Length = 691 Score = 29.6 bits (65), Expect = 8.6 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 638 QSLQAQKPPSPTNSAGKTPARGTKPR---TRPHRRSPANAAAPS 516 Q Q Q+PP P S PA P+ T PH+ PA+ P+ Sbjct: 192 QQQQQQQPPPPPTSQHPQPASQAPPQSQPTPPHQPPPASQQLPA 235
>MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 3) (ATP-energized glutathione S-conjugate pump 3) Length = 1514 Score = 29.6 bits (65), Expect = 8.6 Identities = 22/62 (35%), Positives = 33/62 (53%) Frame = +2 Query: 56 FCVALYCVLACSSTGAHMFAGGLIGFIWIQSGWIGHDSGHHQITSHPALNRLLQVVSGNC 235 F AL+C LA S + + L GF W +SGW+ ++ Q+ S +L LL +VS Sbjct: 80 FKSALFCSLALSLLNLVLMS--LSGFYWYESGWLDNE----QLVS--SLGFLLGMVSWGV 131 Query: 236 LT 241 L+ Sbjct: 132 LS 133
>FAD6E_BRAJU (Q39287) Omega-6 fatty acid desaturase, endoplasmic reticulum (EC| 1.14.19.-) (Delta-12 desaturase) Length = 384 Score = 29.6 bits (65), Expect = 8.6 Identities = 15/62 (24%), Positives = 31/62 (50%) Frame = +2 Query: 116 GGLIGFIWIQSGWIGHDSGHHQITSHPALNRLLQVVSGNCLTGLGIAWWKFNHNTHHISC 295 G ++ +W+ I H+ GHH + + L+ + ++ + L + WK++H HH + Sbjct: 94 GVVLTGVWV----IAHECGHHAFSDYQWLDDTVGLIFHSFLL-VPYFSWKYSHRRHHSNT 148 Query: 296 NS 301 S Sbjct: 149 GS 150 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,073,331 Number of Sequences: 219361 Number of extensions: 2038992 Number of successful extensions: 9084 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 7701 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8978 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)