ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39j20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 545 bits (275), Expect = e-152 Identities = 383/419 (91%) Strand = Plus / Plus Query: 133 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 192 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 222 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 281 Query: 193 gatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttgga 252 |||||||| || | ||||||||| ||| |||||| |||||||| || || ||||||||| Sbjct: 282 gatggctcggctatcaagaagcttcagactggagtaaacaagcttgctgaccttgttgga 341 Query: 253 gttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaag 312 |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| | Sbjct: 342 gttacactgggaccaaagggaaggaatgttgttttggagagcaagtatgggtcccctagg 401 Query: 313 attgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaat 372 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 402 attgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcctgttgaaaat 461 Query: 373 attggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatgga 432 |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 462 attggagctaagttggttaggcaagcagcagcaaagaccaatgatttagctggagatggc 521 Query: 433 acaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgca 492 |||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 522 acaactacttctgttgtgcttgctcaggggctgattgctgagggtgttaaggtcgttgca 581 Query: 493 gctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcactagt 551 ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 582 gctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaagcactagt 640 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1 gaggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctcca 60 ||||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || ||| Sbjct: 81 gaggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgcca 140 Query: 61 actggccttgtatcagacaagaagccat 88 || || ||||||||||||||||||||| Sbjct: 141 accggaattgtatcagacaagaagccat 168
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 545 bits (275), Expect = e-152 Identities = 383/419 (91%) Strand = Plus / Plus Query: 133 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 192 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 222 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 281 Query: 193 gatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttgga 252 |||||||| || | ||||||||| ||| |||||| |||||||| || || ||||||||| Sbjct: 282 gatggctcggctatcaagaagcttcagactggagtaaacaagcttgctgaccttgttgga 341 Query: 253 gttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaag 312 |||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| | Sbjct: 342 gttacactgggaccaaagggaaggaatgttgttttggagagcaagtatgggtcccctagg 401 Query: 313 attgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaat 372 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 402 attgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcctgttgaaaat 461 Query: 373 attggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatgga 432 |||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 462 attggagctaagttggttaggcaagcagcagcaaagaccaatgatttagctggagatggc 521 Query: 433 acaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgca 492 |||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 522 acaactacttctgttgtgcttgctcaggggctgattgctgagggtgttaaggtcgttgca 581 Query: 493 gctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcactagt 551 ||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||||||| Sbjct: 582 gctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaagcactagt 640 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 1 gaggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctcca 60 ||||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || ||| Sbjct: 81 gaggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgcca 140 Query: 61 actggccttgtatcagacaagaagccat 88 || || ||||||||||||||||||||| Sbjct: 141 accggaattgtatcagacaagaagccat 168
>emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 Score = 500 bits (252), Expect = e-138 Identities = 264/268 (98%) Strand = Plus / Plus Query: 311 agattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaa 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 agattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaa 64 Query: 371 atattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 65 atattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagacg 124 Query: 431 gaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattg 490 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 ggacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattg 184 Query: 491 cagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcactag 550 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 185 cagctggtgctaaccctgttcaaattactcgtggtattgagaaaacagcgaaagctctag 244 Query: 551 tccttgaacttaagaagatgtcaaagga 578 |||||||||||||||||||||||||||| Sbjct: 245 tccttgaacttaagaagatgtcaaagga 272
>gb|AY103778.1| Zea mays PCO063180 mRNA sequence Length = 2338 Score = 492 bits (248), Expect = e-136 Identities = 380/424 (89%) Strand = Plus / Plus Query: 128 atgtgcgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttca 187 |||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||||| Sbjct: 357 atgtgcgccttcagaggagggctaacttcagagtaaaagcggctaaggagctgtacttca 416 Query: 188 acaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttg 247 |||||||||| ||||| | ||||||||||||| ||||||||| ||||| ||||| || | Sbjct: 417 acaaggatgggtcagctatcaagaagctccagactggagtcaataagcttgcagacctag 476 Query: 248 ttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggctccc 307 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 477 ttggagttacactcggaccaaagggaaggaatgtcgttttggagagcaagtacggctctc 536 Query: 308 ctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcctgttg 367 | |||||||| || ||||| |||||||||||||||||||||||||||||||| ||||| | Sbjct: 537 ccaagattgttaacgatggcgttacagttgcaagagaggttgagctggaggaccctgtgg 596 Query: 368 aaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagctggag 427 |||| ||||||||||| ||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 597 aaaacattggagctaaattggtcaggcaagctgcagctaagaccaacgatcttgctggag 656 Query: 428 atggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggtta 487 |||| ||||| || ||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 657 atgggacaaccacctctgtggtccttgctcaggggctgattgctgagggtgttaaggttg 716 Query: 488 ttgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcac 547 | ||||||||||| || |||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 717 tggcagctggtgctaatcctgttcagattactcgtggtatcgagaaaacagcgaaagcac 776 Query: 548 tagt 551 |||| Sbjct: 777 tagt 780
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 460 bits (232), Expect = e-126 Identities = 289/308 (93%) Strand = Plus / Plus Query: 244 cttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacggc 303 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 1 cttgttggagttacactgggaccaaagggaaggaatgttgttttggagagcaagtatggg 60 Query: 304 tcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatcct 363 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 61 tcccctaggattgtcaatgatggtgttacagttgcaagagaggttgaactggaggatcct 120 Query: 364 gttgaaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagct 423 ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 121 gttgaaaatattggagctaagttggttaggcaagcagcagcaaagaccaatgatttagct 180 Query: 424 ggagatggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaag 483 |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 181 ggagatggcacaactacttctgttgtgcttgctcaggggctgattgctgagggtgttaag 240 Query: 484 gttattgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaa 543 || |||||||||||||||| ||||| |||||||| |||||||| |||||||| |||||| Sbjct: 241 gtcgttgcagctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaa 300 Query: 544 gcactagt 551 |||||||| Sbjct: 301 gcactagt 308
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 236 bits (119), Expect = 7e-59 Identities = 338/411 (82%) Strand = Plus / Plus Query: 138 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 197 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 221 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 280 Query: 198 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 257 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 281 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 340 Query: 258 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 317 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 341 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 400 Query: 318 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 377 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 401 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 460 Query: 378 agctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaac 437 ||| || || || ||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 461 agccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaac 520 Query: 438 tacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctgg 497 |||||||| ||||||||||| ||| | || | ||||||||||||||| | || ||||| Sbjct: 521 gacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctgg 580 Query: 498 tgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcact 548 ||| || || || || ||||| |||||||| |||||||| || |||||||| Sbjct: 581 tgctaatccagtacagattacccgtggtatagagaaaacggccaaagcact 631
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 236 bits (119), Expect = 7e-59 Identities = 338/411 (82%) Strand = Plus / Plus Query: 138 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 197 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 241 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 300 Query: 198 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 257 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 301 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 360 Query: 258 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 317 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 361 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 420 Query: 318 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 377 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 421 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 480 Query: 378 agctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaac 437 ||| || || || ||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 481 agccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaac 540 Query: 438 tacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctgg 497 |||||||| ||||||||||| ||| | || | ||||||||||||||| | || ||||| Sbjct: 541 gacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctgg 600 Query: 498 tgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcact 548 ||| || || || || ||||| |||||||| |||||||| || |||||||| Sbjct: 601 tgctaatccagtacagattacccgtggtatagagaaaacggccaaagcact 651
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 236 bits (119), Expect = 7e-59 Identities = 338/411 (82%) Strand = Plus / Plus Query: 138 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 197 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 220 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 279 Query: 198 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 257 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 280 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 339 Query: 258 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 317 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 340 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 399 Query: 318 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 377 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 400 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 459 Query: 378 agctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaac 437 ||| || || || ||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 460 agccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaac 519 Query: 438 tacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctgg 497 |||||||| ||||||||||| ||| | || | ||||||||||||||| | || ||||| Sbjct: 520 gacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctgg 579 Query: 498 tgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcact 548 ||| || || || || ||||| |||||||| |||||||| || |||||||| Sbjct: 580 tgctaatccagtacagattacccgtggtatagagaaaacggccaaagcact 630
>dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059D06, full insert sequence Length = 2310 Score = 228 bits (115), Expect = 2e-56 Identities = 328/399 (82%) Strand = Plus / Plus Query: 138 tcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaaggatgg 197 ||||||||| || || |||||||| || || || || ||| | || |||||||||||||| Sbjct: 241 tcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaaggatgg 300 Query: 198 ctcagccaccaagaagctccaggttggagtcaacaagctggcagatcttgttggagttac 257 | || | ||||||||| || ||||||||| ||||| || ||||| |||||||| || Sbjct: 301 gttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttggagtcac 360 Query: 258 attgggaccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgt 317 | || ||||| ||| |||||||||| | ||||||||||| || || ||||| ||||| Sbjct: 361 ccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaaattgt 420 Query: 318 caatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgg 377 ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 421 caatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaatattgg 480 Query: 378 agctaagttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaac 437 ||| || || || ||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 481 agccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatgggacaac 540 Query: 438 tacttctgtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctgg 497 |||||||| ||||||||||| ||| | || | ||||||||||||||| | || ||||| Sbjct: 541 gacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggctgctgg 600 Query: 498 tgccaaccctgttcaaattactcgtggtattgagaaaac 536 ||| || || || || ||||| |||||||| |||||||| Sbjct: 601 tgctaatccagtacagattacccgtggtatagagaaaac 639
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 218 bits (110), Expect = 2e-53 Identities = 134/142 (94%) Strand = Plus / Minus Query: 344 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 403 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 813584 aggttgaactggaggatcctgttgaaaatattggagctaagttggttaggcaagcagcag 813525 Query: 404 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 463 | |||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 813524 caaagaccaatgatttagctggagatggcacaactacttctgttgtgcttgctcaggggc 813465 Query: 464 tcattgctgagggtgttaaggt 485 | |||||||||||||||||||| Sbjct: 813464 tgattgctgagggtgttaaggt 813443 Score = 186 bits (94), Expect = 5e-44 Identities = 118/126 (93%) Strand = Plus / Minus Query: 222 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 281 |||||| |||||||| || || ||||||||||||||| |||||||||||||||||||||| Sbjct: 814137 tggagtaaacaagcttgctgaccttgttggagttacactgggaccaaagggaaggaatgt 814078 Query: 282 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaag 341 |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 814077 tgttttggagagcaagtatgggtcccctaggattgtcaatgatggtgttacagttgcaag 814018 Query: 342 agaggt 347 |||||| Sbjct: 814017 agaggt 814012 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 133 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 192 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 814321 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 814262 Query: 193 gatggctcagccaccaagaagctccaggt 221 |||||||| || | ||||||||| ||||| Sbjct: 814261 gatggctcggctatcaagaagcttcaggt 814233 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 488 ttgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcac 547 |||||||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||| Sbjct: 813334 ttgcagctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaagcac 813275 Query: 548 tagt 551 |||| Sbjct: 813274 tagt 813271 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 2 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 61 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 814461 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 814402 Query: 62 ctggccttgtatcagacaagaagccat 88 | || ||||||||||||||||||||| Sbjct: 814401 ccggaattgtatcagacaagaagccat 814375
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 218 bits (110), Expect = 2e-53 Identities = 134/142 (94%) Strand = Plus / Minus Query: 344 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 403 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 96718 aggttgaactggaggatcctgttgaaaatattggagctaagttggttaggcaagcagcag 96659 Query: 404 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 463 | |||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 96658 caaagaccaatgatttagctggagatggcacaactacttctgttgtgcttgctcaggggc 96599 Query: 464 tcattgctgagggtgttaaggt 485 | |||||||||||||||||||| Sbjct: 96598 tgattgctgagggtgttaaggt 96577 Score = 186 bits (94), Expect = 5e-44 Identities = 118/126 (93%) Strand = Plus / Minus Query: 222 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 281 |||||| |||||||| || || ||||||||||||||| |||||||||||||||||||||| Sbjct: 97271 tggagtaaacaagcttgctgaccttgttggagttacactgggaccaaagggaaggaatgt 97212 Query: 282 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaag 341 |||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 97211 tgttttggagagcaagtatgggtcccctaggattgtcaatgatggtgttacagttgcaag 97152 Query: 342 agaggt 347 |||||| Sbjct: 97151 agaggt 97146 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 133 cgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttcaacaag 192 |||||||||||||| ||||||||||| || ||||| || |||||| | |||||||||||| Sbjct: 97455 cgccttcagaggaagtgcaacttcagggtaaaagctgccaaggagttgtacttcaacaag 97396 Query: 193 gatggctcagccaccaagaagctccaggt 221 |||||||| || | ||||||||| ||||| Sbjct: 97395 gatggctcggctatcaagaagcttcaggt 97367 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 488 ttgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcgaaagcac 547 |||||||||||||||| ||||| |||||||| |||||||| |||||||| |||||||||| Sbjct: 96468 ttgcagctggtgccaatcctgtgcaaattacacgtggtatcgagaaaactgcgaaagcac 96409 Query: 548 tagt 551 |||| Sbjct: 96408 tagt 96405 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 2 aggaaaacatggcttcaccatttggcgccacttctaccgttgggctcatggcagctccaa 61 |||||| |||||||||| |||| || ||||||||||| ||||| |||||||| || |||| Sbjct: 97595 aggaaatcatggcttcaacattcggtgccacttctacggttggcctcatggctgcgccaa 97536 Query: 62 ctggccttgtatcagacaagaagccat 88 | || ||||||||||||||||||||| Sbjct: 97535 ccggaattgtatcagacaagaagccat 97509
>gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence Length = 2155 Score = 184 bits (93), Expect = 2e-43 Identities = 288/353 (81%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| |||||||| || || ||||| | ||||||||||| | ||||| || Sbjct: 302 gtcaacaagcttgcagatctcgtcggggttactcttggaccaaaggggcgaaatgtagtc 361 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | || |||||||| ||||| ||||| ||||||||||||||||| || || |||| ||| Sbjct: 362 ctcgaaagcaagtatggctcacctaaaattgtcaatgatggtgtcactgtggcaaaggag 421 Query: 346 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 405 ||||| || ||||| ||||||||||||||||| ||||| ||||| | |||||||| || Sbjct: 422 gttgaacttgaggaccctgttgaaaatattggtgctaaattggtccgccaagctgctgct 481 Query: 406 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 465 || || || || || ||||| ||||| ||||| ||||| || ||||||||||| ||| | Sbjct: 482 aaaacaaatgacttggctggtgatgggacaaccacttcggttgtccttgctcaagggatg 541 Query: 466 attgctgagggtgttaaggttattgcagctggtgccaaccctgttcaaattactcgtggt 525 ||| |||||||||| |||||| | || |||||||| || || || || || || |||||| Sbjct: 542 attactgagggtgtaaaggttgtagctgctggtgctaatccagtgcagatcacccgtggt 601 Query: 526 attgagaaaacagcgaaagcactagtccttgaacttaagaagatgtcaaagga 578 |||||||||||||| |||||||||||| |||||| | |||||||| ||||| Sbjct: 602 attgagaaaacagccaaagcactagtcagtgaactccaaaagatgtccaagga 654
>gb|AY104969.1| Zea mays PCO070942 mRNA sequence Length = 2290 Score = 182 bits (92), Expect = 8e-43 Identities = 287/352 (81%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| |||||||| || || ||||| | ||||||||||| | ||||| || Sbjct: 429 gtcaacaagcttgcagatctcgtcggggttactcttggaccaaaggggcgaaatgtagtc 488 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | || |||||||| ||||| ||||| ||||||||||||||||| || || |||| ||| Sbjct: 489 ctcgaaagcaagtatggctcacctaaaattgtcaatgatggtgtcactgtggcaaaggag 548 Query: 346 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 405 ||||| || ||||| ||||||||||||||||| ||||| ||||| | |||||||| || Sbjct: 549 gttgaacttgaggaccctgttgaaaatattggtgctaaattggtccgccaagctgctgct 608 Query: 406 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 465 || || || || || ||||| ||||| ||||| ||||| || ||||||||||| ||| | Sbjct: 609 aaaacaaatgacttggctggtgatgggacaaccacttcggttgtccttgctcaagggatg 668 Query: 466 attgctgagggtgttaaggttattgcagctggtgccaaccctgttcaaattactcgtggt 525 ||| |||||||||| |||||| | || |||||||| || || || || || || |||||| Sbjct: 669 attactgagggtgtaaaggttgtagctgctggtgctaatccagtgcagatcacccgtggt 728 Query: 526 attgagaaaacagcgaaagcactagtccttgaacttaagaagatgtcaaagg 577 |||||||||||||| |||||||||||| |||||| | |||||||| |||| Sbjct: 729 attgagaaaacagccaaagcactagtcagtgaactccaaaagatgtccaagg 780
>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2162 Score = 151 bits (76), Expect = 3e-33 Identities = 277/344 (80%) Strand = Plus / Plus Query: 229 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 288 |||||||| || |||||||| || ||||| | || || || ||||||||||||||| | Sbjct: 329 aacaagcttgcggatcttgtcggggttacgcttggtcctaaaggaaggaatgttgttctt 388 Query: 289 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggtt 348 |||||||| || || || ||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct: 389 gagagcaaatatggttcgcctaaaattgttaatgatggtgtcactgttgctaaagaggtt 448 Query: 349 gagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcgaag 408 ||| |||| || || ||||| || ||||| || |||||||| || || || || |||||| Sbjct: 449 gagttggaagacccggttgagaacattggtgccaagttggtgagacaggcagctgcgaag 508 Query: 409 accaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctcatt 468 || || || || || || |||||||| || || ||||| || || || ||||| || ||| Sbjct: 509 acaaatgacttggcaggtgatggaaccacaacctctgttgttctagcccagggccttatt 568 Query: 469 gctgagggtgttaaggttattgcagctggtgccaaccctgttcaaattactcgtggtatt 528 || || ||||| |||||| ||||||||||||| |||||||| | ||||| ||||| ||| Sbjct: 569 gcagaaggtgtaaaggttgttgcagctggtgcaaaccctgtgcttattacacgtggcatt 628 Query: 529 gagaaaacagcgaaagcactagtccttgaacttaagaagatgtc 572 ||||| ||| ||||||| || || |||||||||||||||||| Sbjct: 629 gagaagacatcgaaagctcttgtagctgaacttaagaagatgtc 672
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 149 bits (75), Expect = 1e-32 Identities = 216/263 (82%) Strand = Plus / Plus Query: 274 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 333 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 390 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 449 Query: 334 gttgcaagagaggttgagctggaggatcctgttgaaaatattggagctaagttggttagg 393 || || |||||||||||||| |||||||| ||||| || ||||| |||||| | || || Sbjct: 450 gtcgctagagaggttgagcttgaggatccagttgagaacattggtgctaagctagtgaga 509 Query: 394 caagctgcagcgaagaccaacgatttagctggagatggaacaactacttctgtcgtcctt 453 |||||||| | ||||| || || |||||||| ||||||||||| |||||||| || ||| Sbjct: 510 caagctgcttccaagactaatgacttagctggtgatggaacaacgacttctgttgttctt 569 Query: 454 gctcaggggctcattgctgagggtgttaaggttattgcagctggtgccaaccctgttcaa 513 ||||| || || |||||||| ||||| ||||| | || |||||||| || |||||| Sbjct: 570 gctcaaggtcttattgctgaaggtgtaaaggtggtagctgctggtgcaaatcctgttttg 629 Query: 514 attactcgtggtattgagaaaac 536 ||||| | |||||||||||||| Sbjct: 630 attaccagaggtattgagaaaac 652
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 145 bits (73), Expect = 2e-31 Identities = 178/213 (83%) Strand = Plus / Plus Query: 274 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 333 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 353 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 412 Query: 334 gttgcaagagaggttgagctggaggatcctgttgaaaatattggagctaagttggttagg 393 || || |||||||||||||| |||||||| ||||| || ||||| |||||| | || || Sbjct: 413 gtcgctagagaggttgagcttgaggatccagttgagaacattggtgctaagctagtgaga 472 Query: 394 caagctgcagcgaagaccaacgatttagctggagatggaacaactacttctgtcgtcctt 453 |||||||| | ||||| || || |||||||| ||||||||||| |||||||| || ||| Sbjct: 473 caagctgcttccaagactaatgacttagctggtgatggaacaacgacttctgttgttctt 532 Query: 454 gctcaggggctcattgctgagggtgttaaggtt 486 ||||| || || |||||||| ||||| |||||| Sbjct: 533 gctcaaggtcttattgctgaaggtgtaaaggtt 565
>gb|U46137.1|STU46137 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 627 Score = 145 bits (73), Expect = 2e-31 Identities = 202/245 (82%) Strand = Plus / Plus Query: 265 ccaaagggaaggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgat 324 ||||| ||||| ||||| ||| | |||||||| || || || || || ||||| |||||| Sbjct: 382 ccaaaaggaagaaatgtagttcttgagagcaaatatggatctccgaaaattgtaaatgat 441 Query: 325 ggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattggagctaag 384 |||||||| || || ||||||||||| || || || |||||||| |||||||| || | Sbjct: 442 ggtgttactgtggccagagaggttgaactagaagaccctgttgagaatattggcgcaagt 501 Query: 385 ttggttaggcaagctgcagcgaagaccaacgatttagctggagatggaacaactacttct 444 ||||| || ||||||||| | ||||| || || || ||||| |||||||||||||| ||| Sbjct: 502 ttggtgagacaagctgcatcaaagacaaatgacttggctggggatggaacaactacatct 561 Query: 445 gtcgtccttgctcaggggctcattgctgagggtgttaaggttattgcagctggtgccaac 504 || || | || ||||||||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 562 gttgttttggcacaggggctcataactgagggtgttaaggttgttgcagctggtgcaaac 621 Query: 505 cctgt 509 ||||| Sbjct: 622 cctgt 626
>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2078 Score = 139 bits (70), Expect = 1e-29 Identities = 295/370 (79%) Strand = Plus / Plus Query: 182 acttcaacaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcag 241 |||||||||||||||| ||||| | ||||||||| ||| ||| || ||||| || || | Sbjct: 213 acttcaacaaggatgggtcagctatcaagaagctacagaatggtgtgaacaaacttgctg 272 Query: 242 atcttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacg 301 |||| ||||||||||| | || ||||| || ||||||||||| | ||||||||||| | Sbjct: 273 atctagttggagttactcttggcccaaaaggcaggaatgttgtccttgagagcaagtatg 332 Query: 302 gctcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatc 361 | | || || ||||| |||||||| ||||| || || ||||||||||| | ||||||| Sbjct: 333 gtgctccaaaaattgttaatgatggagttactgtggccagagaggttgaattagaggatc 392 Query: 362 ctgttgaaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttag 421 | || ||||| ||||| || || | || || |||||||| || || ||||| || | | Sbjct: 393 cagtagaaaacattggtgcgaaactagtgagacaagctgctgccaaaaccaatgacctgg 452 Query: 422 ctggagatggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgtta 481 |||| ||||| || || || |||||||| || |||||||| || |||||||| ||||||| Sbjct: 453 ctggggatgggactacaacatctgtcgtgctagctcagggcctaattgctgaaggtgtta 512 Query: 482 aggttattgcagctggtgccaaccctgttcaaattactcgtggtattgagaaaacagcga 541 |||| ||||||||||||| |||||||| | ||| || | || |||||||| ||||| | Sbjct: 513 aggtggttgcagctggtgcaaaccctgtcctaatcaccagaggaattgagaagacagcaa 572 Query: 542 aagcactagt 551 ||||| |||| Sbjct: 573 aagcattagt 582
>gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence Length = 2189 Score = 133 bits (67), Expect = 7e-28 Identities = 265/331 (80%) Strand = Plus / Plus Query: 182 acttcaacaaggatggctcagccaccaagaagctccaggttggagtcaacaagctggcag 241 ||||||| ||||||| || |||| ||||||||||| | || || |||||||| |||| Sbjct: 242 acttcaatcaggatggttctgccattaagaagctccaagcaggtgttaacaagcttgcag 301 Query: 242 atcttgttggagttacattgggaccaaagggaaggaatgttgttttggagagcaagtacg 301 |||| || || || || | || ||||| ||||| ||||| ||| | |||||||| || | Sbjct: 302 atctagtaggtgtaactcttggtccaaaaggaagaaatgtagttcttgagagcaaatatg 361 Query: 302 gctcccctaagattgtcaatgatggtgttacagttgcaagagaggttgagctggaggatc 361 |||| || || ||||| |||||||||||||| || || ||||||||||| || || || | Sbjct: 362 gctctccgaaaattgtaaatgatggtgttactgtggccagagaggttgaactagaagacc 421 Query: 362 ctgttgaaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttag 421 ||||||| |||||||| || | ||||| || |||||||| | ||||| || || || | Sbjct: 422 ctgttgagaatattggtgcaagtttggtgagacaagctgcttcaaagacgaatgacttgg 481 Query: 422 ctggagatggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgtta 481 |||| |||||||||||||| || || || | || ||||||||||| | |||||||||| Sbjct: 482 ctggggatggaacaactacatccgttgttttggcacaggggctcataacggagggtgtta 541 Query: 482 aggttattgcagctggtgccaaccctgttca 512 ||||| ||||||||||||| |||||| |||| Sbjct: 542 aggttgttgcagctggtgcaaaccctattca 572
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 7e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 344 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 403 |||||||||||||||| |||||||||||||||||||| || || || |||||||||||| Sbjct: 160199 aggttgagctggaggaccctgttgaaaatattggagccaaattagtccggcaagctgcag 160258 Query: 404 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 463 | ||||| || ||||| ||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 160259 ccaagacaaatgatttggctggtgatgggacaacgacttctgttgtccttgctcaaggga 160318 Query: 464 tcattgctgagggtgttaaggt 485 | || | |||||||||||||| Sbjct: 160319 tgatcacagagggtgttaaggt 160340 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 222 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 281 ||||||||| ||||| || ||||| |||||||| || | || ||||| ||| ||||||| Sbjct: 159894 tggagtcaataagcttgctgatctcgttggagtcacccttggtccaaaaggacggaatgt 159953 Query: 282 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaa 340 ||| | ||||||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 159954 tgtccttgagagcaagtatggatcacctaaaattgtcaatgatggtgttaccgttgcaa 160012
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 123 bits (62), Expect = 7e-25 Identities = 122/142 (85%) Strand = Plus / Plus Query: 344 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 403 |||||||||||||||| |||||||||||||||||||| || || || |||||||||||| Sbjct: 109226 aggttgagctggaggaccctgttgaaaatattggagccaaattagtccggcaagctgcag 109285 Query: 404 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 463 | ||||| || ||||| ||||| ||||| ||||| |||||||| ||||||||||| ||| Sbjct: 109286 ccaagacaaatgatttggctggtgatgggacaacgacttctgttgtccttgctcaaggga 109345 Query: 464 tcattgctgagggtgttaaggt 485 | || | |||||||||||||| Sbjct: 109346 tgatcacagagggtgttaaggt 109367 Score = 85.7 bits (43), Expect = 1e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 222 tggagtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgt 281 ||||||||| ||||| || ||||| |||||||| || | || ||||| ||| ||||||| Sbjct: 108921 tggagtcaataagcttgctgatctcgttggagtcacccttggtccaaaaggacggaatgt 108980 Query: 282 tgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaa 340 ||| | ||||||||||| || || ||||| |||||||||||||||||||| ||||||| Sbjct: 108981 tgtccttgagagcaagtatggatcacctaaaattgtcaatgatggtgttaccgttgcaa 109039
>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.2 mRNA, complete cds Length = 2060 Score = 121 bits (61), Expect = 3e-24 Identities = 229/285 (80%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 326 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 385 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 386 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 445 Query: 346 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 405 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 446 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 505 Query: 406 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 465 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 506 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 565 Query: 466 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 510 || ||||||||||| ||||| | || |||||||| ||||||||| Sbjct: 566 atcgctgagggtgtcaaggtggtagctgctggtgcaaaccctgtt 610
>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.1 mRNA, complete cds Length = 2087 Score = 121 bits (61), Expect = 3e-24 Identities = 229/285 (80%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 353 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 412 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 413 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 472 Query: 346 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 405 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 473 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 532 Query: 406 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 465 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 533 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 592 Query: 466 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 510 || ||||||||||| ||||| | || |||||||| ||||||||| Sbjct: 593 atcgctgagggtgtcaaggtggtagctgctggtgcaaaccctgtt 637
>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (At1g55490) mRNA, complete cds Length = 1844 Score = 121 bits (61), Expect = 3e-24 Identities = 229/285 (80%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 223 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 282 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 283 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 342 Query: 346 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 405 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 343 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 402 Query: 406 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 465 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 403 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 462 Query: 466 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 510 || ||||||||||| ||||| | || |||||||| ||||||||| Sbjct: 463 atcgctgagggtgtcaaggtggtagctgctggtgcaaaccctgtt 507
>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (T5A14.11) mRNA, complete cds Length = 2060 Score = 121 bits (61), Expect = 3e-24 Identities = 229/285 (80%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 345 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 404 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 405 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 464 Query: 346 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 405 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 465 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 524 Query: 406 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 465 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 525 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 584 Query: 466 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 510 || ||||||||||| ||||| | || |||||||| ||||||||| Sbjct: 585 atcgctgagggtgtcaaggtggtagctgctggtgcaaaccctgtt 629
>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 105 bits (53), Expect = 2e-19 Identities = 228/285 (80%), Gaps = 1/285 (0%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 310 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 369 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | ||||||||||| || || || ||||| ||||||||||| || ||||| |||||| Sbjct: 370 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcgagagag 429 Query: 346 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 405 |||||| |||| || || ||||| || ||||| |||||| | || |||||||| || || Sbjct: 430 gttgagttggaagacccggttgagaacattggcgctaagcttgtgaggcaagcggctgcc 489 Query: 406 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 465 || ||||| || || ||||| || || ||||| || ||||| || ||||| || || | Sbjct: 490 aaaaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtttt 549 Query: 466 attgctgagggtgttaaggttattgcagctggtgccaaccctgtt 510 || ||||||||||| ||||| | || ||||||| |||||||||| Sbjct: 550 atcgctgagggtgtcaaggtggtagctgctggtg-caaccctgtt 593
>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA, complete cds Length = 1922 Score = 97.6 bits (49), Expect = 4e-17 Identities = 205/257 (79%) Strand = Plus / Plus Query: 229 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 288 |||||||| || || |||||||| || ||| | |||||||| || || ||||||||| | Sbjct: 214 aacaagctcgcggaccttgttggtgtcacacttggaccaaaagggagaaatgttgttctt 273 Query: 289 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggtt 348 ||||||||||| || ||||| | ||||| ||||||||||| || ||||| || ||||| Sbjct: 274 gagagcaagtatggatccccaagaattgttaatgatggtgtcactgttgcgagggaggtc 333 Query: 349 gagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcgaag 408 ||| ||||||| || ||||| || ||||| || ||| | || |||||||| || || ||| Sbjct: 334 gagttggaggacccggttgagaacattggtgcaaagcttgtaaggcaagcagctgcaaag 393 Query: 409 accaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctcatt 468 ||||| || || ||||| || || ||||| || ||||| || ||||| || || | ||| Sbjct: 394 accaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggttttatt 453 Query: 469 gctgagggtgttaaggt 485 ||||||||||| ||||| Sbjct: 454 gctgagggtgtcaaggt 470
>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds Length = 1982 Score = 87.7 bits (44), Expect = 4e-14 Identities = 224/284 (78%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| ||||| || ||||| || ||| | ||||| || || | || |||||| Sbjct: 286 gtcaacaagcttgcagacctagttggtgtgacacttggacctaaagggcgaaacgttgtt 345 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | ||||||||||| || || || | ||||||||||||||||| || |||||||| ||| Sbjct: 346 cttgagagcaagtatggatcaccaagaattgtcaatgatggtgtgactgttgcaagggag 405 Query: 346 gttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcagcg 405 ||||| |||| || |||||||| || ||||| || || | ||||||||||| || || Sbjct: 406 gttgaattggaagaccctgttgagaacattggtgccaaacttgttaggcaagcagctgcc 465 Query: 406 aagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggctc 465 |||||||| ||| | || || ||||| || || || ||||| || ||||| || || | Sbjct: 466 aagaccaatgatctggccggtgatggtaccacaacatctgtggttcttgcacaaggtttt 525 Query: 466 attgctgagggtgttaaggttattgcagctggtgccaaccctgt 509 |||||||||||||| ||||| | || |||||||| |||||||| Sbjct: 526 attgctgagggtgtcaaggtggtggctgctggtgcaaaccctgt 569
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 83.8 bits (42), Expect = 6e-13 Identities = 102/122 (83%) Strand = Plus / Plus Query: 226 gtcaacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgtt 285 ||||||||||| |||||||||||||| |||||| | ||||| || ||| | ||||||||| Sbjct: 52583 gtcaacaagctcgcagatcttgttggtgttacacttggacccaaaggacgaaatgttgtt 52642 Query: 286 ttggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagag 345 | ||||||||||| || || || ||||| ||||||||||| || |||||||||||| Sbjct: 52643 cttgagagcaagtatggatcaccacgaattgttaatgatggtgtgactgttgcaagagag 52702 Query: 346 gt 347 || Sbjct: 52703 gt 52704
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 69.9 bits (35), Expect = 9e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 364 gttgaaaatattggagctaagttggttaggcaagctgcagcgaagaccaacgatttagct 423 ||||| || ||||| |||||| | || || |||||||| | ||||| || || |||||| Sbjct: 3 gttgagaacattggtgctaagctagtgagacaagctgcttccaagactaatgacttagct 62 Query: 424 ggagatggaacaactacttctgtcgtccttgctcaggggctcattgctgagggtgttaag 483 || ||||||||||| |||||||| || |||||||| || || |||||||| ||||| ||| Sbjct: 63 ggtgatggaacaacgacttctgttgttcttgctcaaggtcttattgctgaaggtgtaaag 122 Query: 484 gtt 486 ||| Sbjct: 123 gtt 125
>dbj|AK108892.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-E06, full insert sequence Length = 2254 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 287 tggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagagg 346 ||||||||||||||||| ||| |||||||| || |||||||| ||| |||| || |||| Sbjct: 296 tggagagcaagtacggcagccccaagattgtgaacgatggtgtcacaattgccagggagg 355 Query: 347 ttgagctggagga 359 ||||||| ||||| Sbjct: 356 ttgagcttgagga 368
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 229 aacaagctggcagatcttgttggagttacattgggaccaaagggaaggaatgttgttttg 288 |||||||| || || |||||||| || ||| | |||||||| || || ||||||||| | Sbjct: 43910 aacaagctcgcggaccttgttggtgtcacacttggaccaaaagggagaaatgttgttctt 43969 Query: 289 gagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagaggt 347 ||||||||||| || ||||| | ||||| ||||||||||| || ||||| || ||||| Sbjct: 43970 gagagcaagtatggatccccaagaattgttaatgatggtgtcactgttgcgagggaggt 44028 Score = 46.1 bits (23), Expect = 0.13 Identities = 113/143 (79%) Strand = Plus / Plus Query: 344 aggttgagctggaggatcctgttgaaaatattggagctaagttggttaggcaagctgcag 403 |||| ||| ||||||| || ||||| || ||||| || ||| | || |||||||| || | Sbjct: 44109 aggtcgagttggaggacccggttgagaacattggtgcaaagcttgtaaggcaagcagctg 44168 Query: 404 cgaagaccaacgatttagctggagatggaacaactacttctgtcgtccttgctcaggggc 463 | |||||||| || || ||||| || || ||||| || ||||| || ||||| || || Sbjct: 44169 caaagaccaatgacttggctggtgacggtacaacaacatctgttgttcttgcacaaggtt 44228 Query: 464 tcattgctgagggtgttaaggtt 486 | |||||||||||||| |||||| Sbjct: 44229 ttattgctgagggtgtcaaggtt 44251
>gb|BT018703.1| Zea mays clone EL01N0515D02.d mRNA sequence Length = 1562 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 128 atgtgcgccttcagaggaaatgcaacttcagagttaaagcagctaaggagctctacttca 187 ||||||||||||| ||||| ||||| ||||| ||||||||||| || | || || | Sbjct: 1097 atgtgcgccttcaaaggaaggtgaacttaagagtaaaagcagctaataagttatagttta 1156 Query: 188 acaaggatggctcagccaccaagaagctccaggt 221 |||||||||||||| | | ||||||||||||||| Sbjct: 1157 acaaggatggctcatctatcaagaagctccaggt 1190
>dbj|AB009049.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCD7 Length = 87685 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 274 aggaatgttgttttggagagcaagtacggctcccctaagattgtcaatgatggtgttaca 333 |||||||||||| | |||||||| ||||| ||||||| || || |||||||||||||| Sbjct: 87510 aggaatgttgttctagagagcaaatacggttcccctagaatcgttaatgatggtgttacg 87569 Query: 334 gttgcaagagaggt 347 || || |||||||| Sbjct: 87570 gtcgctagagaggt 87583
>gb|AY616039.1| Prototheca wickerhamii plastid 60 kDa chaperonin beta subunit-like mRNA, partial sequence Length = 711 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 287 tggagagcaagtacggctcccctaagattgtcaatgatggtgttacagttgcaagagagg 346 |||||| ||||||||||||||| |||||||| || ||||| || || || || | |||| Sbjct: 292 tggagaccaagtacggctcccccaagattgtgaacgatggcgtgacggtggctcgcgagg 351 Query: 347 ttgagctggagga 359 | ||||||||||| Sbjct: 352 tggagctggagga 364
>gb|DQ074959.1| Lactobacillus reuteri lr0140 (lr0140) gene, partial cds Length = 873 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 260 tgggaccaaagggaaggaatgttgttttgga 290 |||| ||||||||| |||||||||||||||| Sbjct: 89 tgggtccaaagggacggaatgttgttttgga 119
>emb|Z49068.1|CEK01C8 Caenorhabditis elegans Cosmid K01C8, complete sequence Length = 24725 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 420 agctggagatggaacaactact 441 |||||||||||||||||||||| Sbjct: 22853 agctggagatggaacaactact 22874
>emb|AL121588.24|HSDJ54G6 Human DNA sequence from clone RP1-54G6 on chromosome 20 Contains an autophagy Apg3p/Aut1p-like (APG3) pseudogene, complete sequence Length = 84871 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 tctaccgttgggctcatggcag 55 |||||||||||||||||||||| Sbjct: 43287 tctaccgttgggctcatggcag 43266
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 420 agctggagatggaacaactact 441 |||||||||||||||||||||| Sbjct: 1742641 agctggagatggaacaactact 1742620
>dbj|AB220435.1| Macaca fascicularis mRNA, clone QccE-16790: similar to Homo sapiens kinesin family member 13B (KIF13B), mRNA, NM_015254.2 Length = 1706 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 192 ggatggctcagccaccaagaagctccaggt 221 ||||||||||||||||| |||| ||||||| Sbjct: 386 ggatggctcagccaccacgaagttccaggt 357
>ref|NM_063349.4| Caenorhabditis elegans Chaperonin Containing TCP-1 family member (cct-4) (cct-4) mRNA, complete cds Length = 1816 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 420 agctggagatggaacaactact 441 |||||||||||||||||||||| Sbjct: 300 agctggagatggaacaactact 321
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 tgggaccaaagggaaggaatgttgtt 285 |||||||||||||||| ||||||||| Sbjct: 2553955 tgggaccaaagggaagaaatgttgtt 2553930
>gb|U25697.1|CEU25697 Caenorhabditis elegans CCT chaperonin subunit 4 (cct-4) mRNA, complete cds Length = 1623 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 420 agctggagatggaacaactact 441 |||||||||||||||||||||| Sbjct: 300 agctggagatggaacaactact 321
>gb|AC073055.8| Homo sapiens BAC clone RP11-111J8 from 7, complete sequence Length = 87783 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 aagggaaggaatgttgttttg 288 ||||||||||||||||||||| Sbjct: 71972 aagggaaggaatgttgttttg 71952
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 260 tgggaccaaagggaaggaatgttgt 284 |||||||||||||||| |||||||| Sbjct: 1187448 tgggaccaaagggaagaaatgttgt 1187472
>gb|AY029215.1| Lactococcus lactis subsp. cremoris chaperonin GroES and chaperonin GroEL genes, complete cds Length = 2187 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 319 aatgatggtgttacagttgcaagagaggttgagctggaggatcctgttgaaaatattgga 378 ||||||||||||||| |||| | |||| |||| || || || | | |||||||||| ||| Sbjct: 652 aatgatggtgttacaattgccaaagagattgaacttgaagaccattttgaaaatatggga 711 Query: 379 gctaa 383 ||||| Sbjct: 712 gctaa 716
>gb|AC152455.1| Pan troglodytes BAC clone RP43-4I15 from chromosome 7, complete sequence Length = 136468 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 aagggaaggaatgttgttttg 288 ||||||||||||||||||||| Sbjct: 41130 aagggaaggaatgttgttttg 41150
>gb|AC131661.4| Mus musculus BAC clone RP23-251N10 from 1, complete sequence Length = 211188 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 attttcattgtcatctatctc 107 ||||||||||||||||||||| Sbjct: 75246 attttcattgtcatctatctc 75226
>gb|AF417583.1| Enterococcus avium ATCC 14025 GroES and GroEL genes, partial cds Length = 1881 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 252 agttacattgggaccaaagggaaggaatgttgtttt 287 ||||||||| |||||||| ||| | ||||||||||| Sbjct: 366 agttacattaggaccaaaaggacgcaatgttgtttt 401
>gb|AC159422.1| Trypanosoma brucei chromosome 5 clone RPCI93-26C7, complete sequence Length = 144928 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggaaaacatggcttcacca 21 |||||||||||||||||||| Sbjct: 134590 aggaaaacatggcttcacca 134609
>gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P15, complete sequence Length = 130539 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggaaaacatggcttcacca 21 |||||||||||||||||||| Sbjct: 36468 aggaaaacatggcttcacca 36487
>gb|AC158348.4| Mus musculus chromosome 8, clone RP24-134G9, complete sequence Length = 175836 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 caaagggaaggaatgttgttttgg 289 ||||||||||||| |||||||||| Sbjct: 142199 caaagggaaggaaggttgttttgg 142222
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggaaaacatggcttcacca 21 |||||||||||||||||||| Sbjct: 1448190 aggaaaacatggcttcacca 1448209
>gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, complete sequence Length = 157233 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 caaagggaaggaatgttgttttgg 289 ||||||||||||| |||||||||| Sbjct: 24872 caaagggaaggaaggttgttttgg 24895
>gb|AY535007.1| RNA interference vector psiCHECK(TM)-2, complete sequence Length = 6273 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 gctggtgccaaccctgttca 512 |||||||||||||||||||| Sbjct: 3389 gctggtgccaaccctgttca 3408
>gb|AC003083.2| Homo sapiens BAC clone CTB-60N22 from 7, complete sequence Length = 136823 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggaaaacatggcttcacca 21 |||||||||||||||||||| Sbjct: 48952 aggaaaacatggcttcacca 48971
>emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 map Xq28, complete sequence Length = 179396 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aggaaaacatggcttcacca 21 |||||||||||||||||||| Sbjct: 124236 aggaaaacatggcttcacca 124217
>gb|AY487822.1| Reporter vector pGL3(R2.2), complete sequence Length = 5021 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 gctggtgccaaccctgttca 512 |||||||||||||||||||| Sbjct: 945 gctggtgccaaccctgttca 964
>gb|AY487821.1| Reporter vector pGL3(R2.1), complete sequence Length = 4949 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 gctggtgccaaccctgttca 512 |||||||||||||||||||| Sbjct: 945 gctggtgccaaccctgttca 964
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence Length = 186848 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cagacaagaagccattttca 93 |||||||||||||||||||| Sbjct: 176918 cagacaagaagccattttca 176899
>ref|XM_650458.1| Entamoeba histolytica HM-1:IMSS purine nucleoside phosphorylase (27.t00056) partial mRNA Length = 726 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 ctgttgaaaatattggagctaagt 385 |||||||||| ||||||||||||| Sbjct: 449 ctgttgaaaagattggagctaagt 472
>gb|AF067612.2| Caenorhabditis elegans cosmid F55A8, complete sequence Length = 69431 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 taaagcagctaaggagctct 181 |||||||||||||||||||| Sbjct: 66597 taaagcagctaaggagctct 66578
>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete sequence Length = 186272 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 agccaccaagaagctccagg 220 |||||||||||||||||||| Sbjct: 108076 agccaccaagaagctccagg 108095
>emb|AL772411.1| Human DNA sequence from clone RP11-180N18 on chromosome 1 Contains the AHCYL1 S-adenosylhomocysteine hydrolase-like 1 and the 5' end of gene KIAA1761 (FLJ14743), complete sequence Length = 81378 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tgagaaaacagcgaaagcac 547 |||||||||||||||||||| Sbjct: 14036 tgagaaaacagcgaaagcac 14017
>emb|AL389888.8| Human DNA sequence from clone RP11-389K14 on chromosome 9 Contains two olfactory receptor pseudogenes and the 3' end of a novel gene, complete sequence Length = 202874 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 aagcagctaaggagctctacttca 187 |||| ||||||||||||||||||| Sbjct: 86323 aagccgctaaggagctctacttca 86300
>emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chromosome Xq12-13.1 Contains the 3' end of the OPHN1 gene for oligophrenin 1, complete sequence Length = 190611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggaaaacatggcttcacca 21 |||||||||||||||||||| Sbjct: 89615 aggaaaacatggcttcacca 89634
>emb|AL121972.17|HSJ397H23 Human DNA sequence from clone RP3-397H23 on chromosome 6q12-14.1 Contains the 3' end of SLC17A5 gene for solute carrier family 17 (anion/sugar transporter), member 5, a ribosomal S27 protein pseudogene and a CpG island, complete sequence Length = 113202 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ttcaaattactcgtggtatt 528 |||||||||||||||||||| Sbjct: 109094 ttcaaattactcgtggtatt 109113
>emb|AL031281.6|HS224A6 Human DNA sequence from clone RP1-224A6 on chromosome 1p35.1-36.23 Contains the 3' UTR of the ELA3A gene for elastase 3A (pancreatic (protease E)), three novel genes, the CDC42 gene for cell division cycle 42 (GTP binding protein, 25kDa), the 3' end of the WNT4 gene for wingless-type MMTV integration site family (member 4) and a CpG island, complete sequence Length = 129366 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgttgttttggagagcaagt 298 |||||||||||||||||||| Sbjct: 30261 tgttgttttggagagcaagt 30242
>emb|X56034.1|MIHVP63 H.virescens mitochondrial p63 gene for an isoform of chaperonin Length = 1825 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gctggagatggaacaactac 440 |||||||||||||||||||| Sbjct: 334 gctggagatggaacaactac 353
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 475 ggtgttaaggttattgcagctggtgccaaccc 506 ||||||||| || |||||||||||| |||||| Sbjct: 206605 ggtgttaagcttgttgcagctggtggcaaccc 206574
>emb|AJ621720.1| Lactobacillus cypricasei partial hsp60 gene for GroEL, strain CCUG42961T Length = 717 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 cagctggtgccaaccctgtt 510 |||||||||||||||||||| Sbjct: 188 cagctggtgccaaccctgtt 207
>emb|AJ621719.1| Lactobacillus acidipiscis partial hsp60 gene for GroEL, strain CIP106750T Length = 715 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 491 cagctggtgccaaccctgtt 510 |||||||||||||||||||| Sbjct: 191 cagctggtgccaaccctgtt 210
>emb|AJ439087.1|BAP439087 Buchnera aphidicola (Chaetophorus leucomelas) groEL gene Length = 1656 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 252 agttacattgggaccaaagggaaggaatgttgtttt 287 |||||| || |||||||| ||||| ||||||||||| Sbjct: 84 agttactttaggaccaaaaggaagaaatgttgtttt 119
>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence Length = 217939 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 agccaccaagaagctccagg 220 |||||||||||||||||||| Sbjct: 31977 agccaccaagaagctccagg 31958
>gb|AF359578.1| Rana catesbeiana RC-RNase7 precursor, mRNA, complete cds Length = 499 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ttgtcaatgatggtgttacagttg 337 ||||| |||||||||||||||||| Sbjct: 173 ttgtccatgatggtgttacagttg 150
>gb|AC061710.16| Homo sapiens 3 BAC RP11-395F21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187657 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 aggaaaacatggcttcacca 21 |||||||||||||||||||| Sbjct: 148291 aggaaaacatggcttcacca 148310
>gb|AF355773.1| Bartonella birtlesii 60 KDa heat shock protein (groEl) gene, partial cds Length = 1418 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 406 aagaccaacgatttagctggagatggaacaac 437 |||||||||||| | ||||| ||||||||||| Sbjct: 21 aagaccaacgatattgctggtgatggaacaac 52
>gb|AC003060.1| Mus musculus Chromosome 16 BAC Clone 72k21 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 118235 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 agccaccaagaagctccagg 220 |||||||||||||||||||| Sbjct: 65791 agccaccaagaagctccagg 65810
>emb|CR385048.3| Wallaby DNA sequence from clone XX-121C8, complete sequence Length = 37081 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 agaagctccaggttggagtc 228 |||||||||||||||||||| Sbjct: 5286 agaagctccaggttggagtc 5305
>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome Length = 615980 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 gctggagatggaacaactac 440 |||||||||||||||||||| Sbjct: 20461 gctggagatggaacaactac 20480
>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence Length = 195335 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 agccaccaagaagctccagg 220 |||||||||||||||||||| Sbjct: 98967 agccaccaagaagctccagg 98986
>gb|AF351209.1|AF351209 Rana catesbeiana RNase A-type ribonuclease rc208 precursor, gene, complete cds Length = 402 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ttgtcaatgatggtgttacagttg 337 ||||| |||||||||||||||||| Sbjct: 140 ttgtccatgatggtgttacagttg 117
>gb|AF351207.1|AF351207 Rana catesbeiana RNase A-type ribonuclease rc203 precursor, gene, complete cds Length = 399 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ttgtcaatgatggtgttacagttg 337 ||||| |||||||||||||||||| Sbjct: 140 ttgtccatgatggtgttacagttg 117
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gctggcagatcttgttggag 253 |||||||||||||||||||| Sbjct: 6647592 gctggcagatcttgttggag 6647611
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cagacaagaagccattttca 93 |||||||||||||||||||| Sbjct: 9931 cagacaagaagccattttca 9950
>gb|AC016730.9| Homo sapiens BAC clone RP11-375H3 from 2, complete sequence Length = 172243 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 aggaaaacatggcttcacca 21 |||||||||||||||||||| Sbjct: 151254 aggaaaacatggcttcacca 151235
>gb|AF276193.1|AF276193 Scaphirhynchus platorynchus microsatellite Spl-151 sequence Length = 517 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ctcaggggctcattgctgag 474 |||||||||||||||||||| Sbjct: 331 ctcaggggctcattgctgag 350
>gb|AC084474.1|CBRG01A7 Caenorhabditis briggsae cosmid G01A7, complete sequence Length = 18839 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 aagccattttcattgtcatctatc 105 ||||||||||||||||||| |||| Sbjct: 17673 aagccattttcattgtcatttatc 17696
>gb|AF039104.1|AF039104 Rana catesbeiana ribonuclease precursor (rcr) mRNA, complete cds Length = 883 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ttgtcaatgatggtgttacagttg 337 ||||| |||||||||||||||||| Sbjct: 383 ttgtccatgatggtgttacagttg 360
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gctggcagatcttgttggag 253 |||||||||||||||||||| Sbjct: 127763 gctggcagatcttgttggag 127782
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete sequence Length = 156508 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gtcgtccttgctcaggggct 464 |||||||||||||||||||| Sbjct: 64496 gtcgtccttgctcaggggct 64515
>dbj|AB048352.1| Paramecium caudatum gene for hsp60, partial cds Length = 542 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggaccaaagggaaggaatgttgtt 285 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24
>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete sequence Length = 192196 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gtgttacagttgcaagagag 345 |||||||||||||||||||| Sbjct: 147349 gtgttacagttgcaagagag 147330
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggaccaaagggaaggaatgttgtt 285 ||||||||||||||||| |||||| Sbjct: 532617 ggaccaaagggaaggaacgttgtt 532640
>gb|AC132475.4| Mus musculus BAC clone RP23-114P16 from 3, complete sequence Length = 215899 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 aggatcctgttgaaaatatt 375 |||||||||||||||||||| Sbjct: 55483 aggatcctgttgaaaatatt 55502
>dbj|AP005231.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-78G22, complete sequence Length = 102488 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ttcattgtcatctatctccc 109 |||||||||||||||||||| Sbjct: 75546 ttcattgtcatctatctccc 75565
>dbj|AB086955.1| Clostridium botulinum genes for GroES homolog, GroEL homolog, complete cds Length = 2634 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 256 acattgggaccaaagggaaggaatgttgtttt 287 ||||| |||||||| ||||| ||||||||||| Sbjct: 753 acattaggaccaaaaggaagaaatgttgtttt 784
>emb|AL935175.6| Mouse DNA sequence from clone RP23-397E13 on chromosome 2, complete sequence Length = 158592 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 caagaagctccaggttggagtcaa 230 ||||||||||||| |||||||||| Sbjct: 112036 caagaagctccagattggagtcaa 112013
>dbj|AB072441.1| Tetrahymena pyriformis hsp60 gene for heat shock 60kD protein, partial cds Length = 516 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggaccaaagggaaggaatgttgtt 285 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24
>dbj|AB072440.1| Tetrahymena thermophila hsp60 gene for heat shock 60kD protein, partial cds Length = 516 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 262 ggaccaaagggaaggaatgttgtt 285 |||||||||||||| ||||||||| Sbjct: 1 ggaccaaagggaagaaatgttgtt 24 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,185,198 Number of Sequences: 3902068 Number of extensions: 5185198 Number of successful extensions: 91272 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90933 Number of HSP's gapped (non-prelim): 319 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
