Clone Information

BLAST Search Result

Clone Name	bags39j15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_478915.1\| Oryza sativa (japonica cultivar-group), mRNA	500	e-138
2	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	500	e-138
3	dbj\|AP003747.5\| Oryza sativa (japonica cultivar-group) genomic D...	500	e-138
4	dbj\|AK121109.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	500	e-138
5	dbj\|AK067725.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	500	e-138
6	gb\|BT018748.1\| Zea mays clone EL01N0522F03.d mRNA sequence	202	1e-48
7	gb\|AY106359.1\| Zea mays PCO114626 mRNA sequence	165	2e-37
8	gb\|BT016400.1\| Zea mays clone Contig233 mRNA sequence	157	5e-35
9	ref\|XM_662479.1\| Cryptosporidium hominis TU502 hypothetical prot...	46	0.14
10	emb\|AL442644.7\| Human DNA sequence from clone RP11-342F21 on chr...	44	0.54
11	gb\|DP000057.1\| Dasypus novemcinctus target 117 genomic scaffold	44	0.54
12	gb\|AC106787.2\| Homo sapiens chromosome 5 clone RP11-365I6, compl...	44	0.54
13	gb\|AC106809.2\| Homo sapiens chromosome 5 clone RP11-53K6, comple...	44	0.54
14	gb\|AC003998.1\|AC003998 Human PAC clone RP1-161J9 from 5q31, comp...	44	0.54
15	ref\|NM_145612.1\| Mus musculus cDNA sequence BC005471 (BC005471),...	42	2.1
16	gb\|AC125531.3\| Mus musculus BAC clone RP23-396D12 from chromosom...	42	2.1
17	gb\|AC123813.4\| Mus musculus BAC clone RP24-229D8 from chromosome...	42	2.1
18	emb\|AL451124.13\| Human DNA sequence from clone RP11-20P5 on chro...	42	2.1
19	gb\|BC005471.1\| Mus musculus cDNA sequence BC005471, mRNA (cDNA c...	42	2.1
20	emb\|BX248512.14\| Zebrafish DNA sequence from clone CH211-284D12 ...	42	2.1
21	gb\|AC145543.3\| Homo sapiens chromosome UNKNOWN clone RP11-1278L2...	42	2.1
22	gb\|AC159308.4\| Mus musculus BAC clone RP23-187B11 from chromosom...	42	2.1
23	ref\|NM_195812.1\| Oryza sativa (japonica cultivar-group) putative...	40	8.4
24	gb\|AY686596.1\| Apis mellifera Dscam gene, complete cds, alternat...	40	8.4
25	gb\|AC113989.6\| Mus musculus chromosome 3, clone RP24-130I14, com...	40	8.4
26	gb\|AC148876.2\| Pan troglodytes BAC clone CH251-50I16 from Y, com...	40	8.4
27	gb\|AC146453.3\| Pan troglodytes BAC clone CH251-510F17 from Y, co...	40	8.4
28	gb\|AC147675.2\| Pan troglodytes BAC clone CH251-6P20 from Y, comp...	40	8.4
29	gb\|AC009152.8\| Homo sapiens chromosome 16 clone RP11-567P19, com...	40	8.4
30	gb\|AC123061.4\| Mus musculus BAC clone RP23-216H22 from 14, compl...	40	8.4
31	gb\|AC020743.7\| Homo sapiens BAC clone RP11-813K3 from 7, complet...	40	8.4
32	emb\|AL590784.9\| Human DNA sequence from clone RP11-260I7 on chro...	40	8.4
33	emb\|AL512642.18\| Human DNA sequence from clone RP11-469L23 on ch...	40	8.4
34	gb\|AC134517.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.4
35	emb\|AL353895.4\| Human DNA sequence from clone RP11-503K16 on chr...	40	8.4
36	emb\|BX571974.6\| Zebrafish DNA sequence from clone DKEY-29P4 in l...	40	8.4
37	gb\|AC115686.1\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.4
38	dbj\|BS000655.1\| Pan troglodytes chromosome Y clone:PTB-215M20, c...	40	8.4
39	dbj\|BS000623.1\| Pan troglodytes chromosome Y clone:PTBY-008C04, ...	40	8.4
40	dbj\|BS000615.1\| Pan troglodytes chromosome Y clone:PTBY-009P07, ...	40	8.4
41	dbj\|BS000566.1\| Pan troglodytes chromosome Y clone:PTFY-001D15, ...	40	8.4
42	dbj\|BS000609.1\| Pan troglodytes chromosome Y clone:PTB-217K15, c...	40	8.4
43	gb\|DP000054.1\| Pan troglodytes chromosome Y, partial sequence	40	8.4
44	ref\|XM_625657.1\| Cryptosporidium parvum Iowa II hypothetical pro...	40	8.4
45	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.4
46	ref\|XM_395050.1\| PREDICTED: Apis mellifera similar to ENSANGP000...	40	8.4
47	gb\|AC125470.3\| Homo sapiens BAC clone RP13-589L22 from 4, comple...	40	8.4
48	gb\|AC159015.2\| Pan troglodytes BAC clone CH251-675K5 from chromo...	40	8.4
49	dbj\|AP005830.4\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.4
50	dbj\|AP006479.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.4
51	emb\|AL449963.2\|HS399M15 Homo sapiens chromosome 9 BAC RP11-399M1...	40	8.4
52	gb\|AC121887.4\| Mus musculus BAC clone RP24-142B15 from 5, comple...	40	8.4
53	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.4
54	emb\|AL683809.7\| Mouse DNA sequence from clone RP23-440B21 on chr...	40	8.4
55	dbj\|AP001017.5\| Homo sapiens genomic DNA, chromosome 18p clone:R...	40	8.4

>ref|XM_478915.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2469

 Score =  500 bits (252), Expect = e-138
 Identities = 518/606 (85%), Gaps = 3/606 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    aatgggttttcttcatttgggcccagttatggaatgggcatgaatgttgaaactgggatg 63
            ||||| || ||||||||||| ||  ||||||||||||||||||||  |||| ||||||||
Sbjct: 1193 aatggattctcttcatttggccctggttatggaatgggcatgaattctgaatctgggatg 1252

                                                                        
Query: 64   aatgcaaattttggtgcaaattctagcttcctcaataactcaaatgggcggcaaatgggc 123
            ||||| |||||||| || |||||||| ||  |||||||||| ||||||||||| || || 
Sbjct: 1253 aatgcgaattttggcgccaattctagttttgtcaataactccaatgggcggcagataggt 1312

                                                                        
Query: 124  tcatactacaatggtggttcaaacagactaggtagccctattgggtacgttggtcttaat 183
            |||| |||||||||| ||||||||||| ||||||| |||||||| || ||||||||||||
Sbjct: 1313 tcattctacaatggtagttcaaacagattaggtagtcctattggttatgttggtcttaat 1372

                                                                        
Query: 184  gacgattcaggatccatattgagttcaatgggaaggaatgtttggggtaatggaaatgtc 243
            || |||||||||||  ||||||||||||||  |||||||||||||||||||| |||| | 
Sbjct: 1373 gatgattcaggatcactattgagttcaatgtcaaggaatgtttggggtaatgaaaatctg 1432

                                                                        
Query: 244  aactaccagaacagccctacaaacatgagttcttttgtaccatctggaagtgggagtcaa 303
            |||||||  |||| ||| ||||||||||||||||||| ||||||||||| |||  |||||
Sbjct: 1433 aactacccaaacaaccccacaaacatgagttcttttgcaccatctggaactggaggtcaa 1492

                                                                        
Query: 304  gttggtattactgccgatggtatcaattggggaggtcctacttctgctcatgggatggga 363
             | ||||||||    || ||||| ||||||||||| |||||| |||  ||||| ||||| 
Sbjct: 1493 atgggtattaccagtgacggtattaattggggagggcctactcctggccatggaatgggc 1552

                                                                        
Query: 364  agcatttcaagccttgg---gtctaacattggccgtgggactggagataactttggtttg 420
            | |||||||||||||||   | ||||| ||||||||||  ||||||| |  ||||| |||
Sbjct: 1553 aacatttcaagccttgggctggctaaccttggccgtggagctggagacagttttggcttg 1612

                                                                        
Query: 421  ccatctggcggctatggaaggagcaacccaactggcaccattggtgaacctttttctgca 480
            || |||||| ||||||||||||||||  ||||||| |||||||||||||| || ||||||
Sbjct: 1613 ccttctggcagctatggaaggagcaatgcaactggtaccattggtgaacccttctctgca 1672

                                                                        
Query: 481  tcagccaatgcatatgaaatgaacaacatagatacatatggcaacaactctatttatggt 540
             || |||||||||||||| |||||||   |||||||||||||| || ||| |||||||| 
Sbjct: 1673 ccacccaatgcatatgaagtgaacaatgcagatacatatggcagcagctccatttatgga 1732

                                                                        
Query: 541  gactcaacctggaggttcacgtcatctgagatcgatattcctccttttgataatgatctt 600
            |||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||| |||
Sbjct: 1733 gactcaacttggaggttcacgtcatctgagattgatatgcctccttttggtaatgacctt 1792

                  
Query: 601  ggaaat 606
            ||||||
Sbjct: 1793 ggaaat 1798

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  500 bits (252), Expect = e-138
 Identities = 518/606 (85%), Gaps = 3/606 (0%)
 Strand = Plus / Plus

                                                                            
Query: 4        aatgggttttcttcatttgggcccagttatggaatgggcatgaatgttgaaactgggatg 63
                ||||| || ||||||||||| ||  ||||||||||||||||||||  |||| ||||||||
Sbjct: 23652262 aatggattctcttcatttggccctggttatggaatgggcatgaattctgaatctgggatg 23652321

                                                                            
Query: 64       aatgcaaattttggtgcaaattctagcttcctcaataactcaaatgggcggcaaatgggc 123
                ||||| |||||||| || |||||||| ||  |||||||||| ||||||||||| || || 
Sbjct: 23652322 aatgcgaattttggcgccaattctagttttgtcaataactccaatgggcggcagataggt 23652381

                                                                            
Query: 124      tcatactacaatggtggttcaaacagactaggtagccctattgggtacgttggtcttaat 183
                |||| |||||||||| ||||||||||| ||||||| |||||||| || ||||||||||||
Sbjct: 23652382 tcattctacaatggtagttcaaacagattaggtagtcctattggttatgttggtcttaat 23652441

                                                                            
Query: 184      gacgattcaggatccatattgagttcaatgggaaggaatgtttggggtaatggaaatgtc 243
                || |||||||||||  ||||||||||||||  |||||||||||||||||||| |||| | 
Sbjct: 23652442 gatgattcaggatcactattgagttcaatgtcaaggaatgtttggggtaatgaaaatctg 23652501

                                                                            
Query: 244      aactaccagaacagccctacaaacatgagttcttttgtaccatctggaagtgggagtcaa 303
                |||||||  |||| ||| ||||||||||||||||||| ||||||||||| |||  |||||
Sbjct: 23652502 aactacccaaacaaccccacaaacatgagttcttttgcaccatctggaactggaggtcaa 23652561

                                                                            
Query: 304      gttggtattactgccgatggtatcaattggggaggtcctacttctgctcatgggatggga 363
                 | ||||||||    || ||||| ||||||||||| |||||| |||  ||||| ||||| 
Sbjct: 23652562 atgggtattaccagtgacggtattaattggggagggcctactcctggccatggaatgggc 23652621

                                                                            
Query: 364      agcatttcaagccttgg---gtctaacattggccgtgggactggagataactttggtttg 420
                | |||||||||||||||   | ||||| ||||||||||  ||||||| |  ||||| |||
Sbjct: 23652622 aacatttcaagccttgggctggctaaccttggccgtggagctggagacagttttggcttg 23652681

                                                                            
Query: 421      ccatctggcggctatggaaggagcaacccaactggcaccattggtgaacctttttctgca 480
                || |||||| ||||||||||||||||  ||||||| |||||||||||||| || ||||||
Sbjct: 23652682 ccttctggcagctatggaaggagcaatgcaactggtaccattggtgaacccttctctgca 23652741

                                                                            
Query: 481      tcagccaatgcatatgaaatgaacaacatagatacatatggcaacaactctatttatggt 540
                 || |||||||||||||| |||||||   |||||||||||||| || ||| |||||||| 
Sbjct: 23652742 ccacccaatgcatatgaagtgaacaatgcagatacatatggcagcagctccatttatgga 23652801

                                                                            
Query: 541      gactcaacctggaggttcacgtcatctgagatcgatattcctccttttgataatgatctt 600
                |||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||| |||
Sbjct: 23652802 gactcaacttggaggttcacgtcatctgagattgatatgcctccttttggtaatgacctt 23652861

                      
Query: 601      ggaaat 606
                ||||||
Sbjct: 23652862 ggaaat 23652867



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 361      ggaagcatttcaagccttgg 380
                ||||||||||||||||||||
Sbjct: 11557174 ggaagcatttcaagccttgg 11557193

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>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1127_E01
          Length = 123787

 Score =  500 bits (252), Expect = e-138
 Identities = 518/606 (85%), Gaps = 3/606 (0%)
 Strand = Plus / Plus

                                                                          
Query: 4      aatgggttttcttcatttgggcccagttatggaatgggcatgaatgttgaaactgggatg 63
              ||||| || ||||||||||| ||  ||||||||||||||||||||  |||| ||||||||
Sbjct: 104703 aatggattctcttcatttggccctggttatggaatgggcatgaattctgaatctgggatg 104762

                                                                          
Query: 64     aatgcaaattttggtgcaaattctagcttcctcaataactcaaatgggcggcaaatgggc 123
              ||||| |||||||| || |||||||| ||  |||||||||| ||||||||||| || || 
Sbjct: 104763 aatgcgaattttggcgccaattctagttttgtcaataactccaatgggcggcagataggt 104822

                                                                          
Query: 124    tcatactacaatggtggttcaaacagactaggtagccctattgggtacgttggtcttaat 183
              |||| |||||||||| ||||||||||| ||||||| |||||||| || ||||||||||||
Sbjct: 104823 tcattctacaatggtagttcaaacagattaggtagtcctattggttatgttggtcttaat 104882

                                                                          
Query: 184    gacgattcaggatccatattgagttcaatgggaaggaatgtttggggtaatggaaatgtc 243
              || |||||||||||  ||||||||||||||  |||||||||||||||||||| |||| | 
Sbjct: 104883 gatgattcaggatcactattgagttcaatgtcaaggaatgtttggggtaatgaaaatctg 104942

                                                                          
Query: 244    aactaccagaacagccctacaaacatgagttcttttgtaccatctggaagtgggagtcaa 303
              |||||||  |||| ||| ||||||||||||||||||| ||||||||||| |||  |||||
Sbjct: 104943 aactacccaaacaaccccacaaacatgagttcttttgcaccatctggaactggaggtcaa 105002

                                                                          
Query: 304    gttggtattactgccgatggtatcaattggggaggtcctacttctgctcatgggatggga 363
               | ||||||||    || ||||| ||||||||||| |||||| |||  ||||| ||||| 
Sbjct: 105003 atgggtattaccagtgacggtattaattggggagggcctactcctggccatggaatgggc 105062

                                                                          
Query: 364    agcatttcaagccttgg---gtctaacattggccgtgggactggagataactttggtttg 420
              | |||||||||||||||   | ||||| ||||||||||  ||||||| |  ||||| |||
Sbjct: 105063 aacatttcaagccttgggctggctaaccttggccgtggagctggagacagttttggcttg 105122

                                                                          
Query: 421    ccatctggcggctatggaaggagcaacccaactggcaccattggtgaacctttttctgca 480
              || |||||| ||||||||||||||||  ||||||| |||||||||||||| || ||||||
Sbjct: 105123 ccttctggcagctatggaaggagcaatgcaactggtaccattggtgaacccttctctgca 105182

                                                                          
Query: 481    tcagccaatgcatatgaaatgaacaacatagatacatatggcaacaactctatttatggt 540
               || |||||||||||||| |||||||   |||||||||||||| || ||| |||||||| 
Sbjct: 105183 ccacccaatgcatatgaagtgaacaatgcagatacatatggcagcagctccatttatgga 105242

                                                                          
Query: 541    gactcaacctggaggttcacgtcatctgagatcgatattcctccttttgataatgatctt 600
              |||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||| |||
Sbjct: 105243 gactcaacttggaggttcacgtcatctgagattgatatgcctccttttggtaatgacctt 105302

                    
Query: 601    ggaaat 606
              ||||||
Sbjct: 105303 ggaaat 105308

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>dbj|AK121109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072P12, full
            insert sequence
          Length = 1972

 Score =  500 bits (252), Expect = e-138
 Identities = 518/606 (85%), Gaps = 3/606 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    aatgggttttcttcatttgggcccagttatggaatgggcatgaatgttgaaactgggatg 63
            ||||| || ||||||||||| ||  ||||||||||||||||||||  |||| ||||||||
Sbjct: 772  aatggattctcttcatttggccctggttatggaatgggcatgaattctgaatctgggatg 831

                                                                        
Query: 64   aatgcaaattttggtgcaaattctagcttcctcaataactcaaatgggcggcaaatgggc 123
            ||||| |||||||| || |||||||| ||  |||||||||| ||||||||||| || || 
Sbjct: 832  aatgcgaattttggcgccaattctagttttgtcaataactccaatgggcggcagataggt 891

                                                                        
Query: 124  tcatactacaatggtggttcaaacagactaggtagccctattgggtacgttggtcttaat 183
            |||| |||||||||| ||||||||||| ||||||| |||||||| || ||||||||||||
Sbjct: 892  tcattctacaatggtagttcaaacagattaggtagtcctattggttatgttggtcttaat 951

                                                                        
Query: 184  gacgattcaggatccatattgagttcaatgggaaggaatgtttggggtaatggaaatgtc 243
            || |||||||||||  ||||||||||||||  |||||||||||||||||||| |||| | 
Sbjct: 952  gatgattcaggatcactattgagttcaatgtcaaggaatgtttggggtaatgaaaatctg 1011

                                                                        
Query: 244  aactaccagaacagccctacaaacatgagttcttttgtaccatctggaagtgggagtcaa 303
            |||||||  |||| ||| ||||||||||||||||||| ||||||||||| |||  |||||
Sbjct: 1012 aactacccaaacaaccccacaaacatgagttcttttgcaccatctggaactggaggtcaa 1071

                                                                        
Query: 304  gttggtattactgccgatggtatcaattggggaggtcctacttctgctcatgggatggga 363
             | ||||||||    || ||||| ||||||||||| |||||| |||  ||||| ||||| 
Sbjct: 1072 atgggtattaccagtgacggtattaattggggagggcctactcctggccatggaatgggc 1131

                                                                        
Query: 364  agcatttcaagccttgg---gtctaacattggccgtgggactggagataactttggtttg 420
            | |||||||||||||||   | ||||| ||||||||||  ||||||| |  ||||| |||
Sbjct: 1132 aacatttcaagccttgggctggctaaccttggccgtggagctggagacagttttggcttg 1191

                                                                        
Query: 421  ccatctggcggctatggaaggagcaacccaactggcaccattggtgaacctttttctgca 480
            || |||||| ||||||||||||||||  ||||||| |||||||||||||| || ||||||
Sbjct: 1192 ccttctggcagctatggaaggagcaatgcaactggtaccattggtgaacccttctctgca 1251

                                                                        
Query: 481  tcagccaatgcatatgaaatgaacaacatagatacatatggcaacaactctatttatggt 540
             || |||||||||||||| |||||||   |||||||||||||| || ||| |||||||| 
Sbjct: 1252 ccacccaatgcatatgaagtgaacaatgcagatacatatggcagcagctccatttatgga 1311

                                                                        
Query: 541  gactcaacctggaggttcacgtcatctgagatcgatattcctccttttgataatgatctt 600
            |||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||| |||
Sbjct: 1312 gactcaacttggaggttcacgtcatctgagattgatatgcctccttttggtaatgacctt 1371

                  
Query: 601  ggaaat 606
            ||||||
Sbjct: 1372 ggaaat 1377

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>dbj|AK067725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G21, full
            insert sequence
          Length = 2469

 Score =  500 bits (252), Expect = e-138
 Identities = 518/606 (85%), Gaps = 3/606 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    aatgggttttcttcatttgggcccagttatggaatgggcatgaatgttgaaactgggatg 63
            ||||| || ||||||||||| ||  ||||||||||||||||||||  |||| ||||||||
Sbjct: 1193 aatggattctcttcatttggccctggttatggaatgggcatgaattctgaatctgggatg 1252

                                                                        
Query: 64   aatgcaaattttggtgcaaattctagcttcctcaataactcaaatgggcggcaaatgggc 123
            ||||| |||||||| || |||||||| ||  |||||||||| ||||||||||| || || 
Sbjct: 1253 aatgcgaattttggcgccaattctagttttgtcaataactccaatgggcggcagataggt 1312

                                                                        
Query: 124  tcatactacaatggtggttcaaacagactaggtagccctattgggtacgttggtcttaat 183
            |||| |||||||||| ||||||||||| ||||||| |||||||| || ||||||||||||
Sbjct: 1313 tcattctacaatggtagttcaaacagattaggtagtcctattggttatgttggtcttaat 1372

                                                                        
Query: 184  gacgattcaggatccatattgagttcaatgggaaggaatgtttggggtaatggaaatgtc 243
            || |||||||||||  ||||||||||||||  |||||||||||||||||||| |||| | 
Sbjct: 1373 gatgattcaggatcactattgagttcaatgtcaaggaatgtttggggtaatgaaaatctg 1432

                                                                        
Query: 244  aactaccagaacagccctacaaacatgagttcttttgtaccatctggaagtgggagtcaa 303
            |||||||  |||| ||| ||||||||||||||||||| ||||||||||| |||  |||||
Sbjct: 1433 aactacccaaacaaccccacaaacatgagttcttttgcaccatctggaactggaggtcaa 1492

                                                                        
Query: 304  gttggtattactgccgatggtatcaattggggaggtcctacttctgctcatgggatggga 363
             | ||||||||    || ||||| ||||||||||| |||||| |||  ||||| ||||| 
Sbjct: 1493 atgggtattaccagtgacggtattaattggggagggcctactcctggccatggaatgggc 1552

                                                                        
Query: 364  agcatttcaagccttgg---gtctaacattggccgtgggactggagataactttggtttg 420
            | |||||||||||||||   | ||||| ||||||||||  ||||||| |  ||||| |||
Sbjct: 1553 aacatttcaagccttgggctggctaaccttggccgtggagctggagacagttttggcttg 1612

                                                                        
Query: 421  ccatctggcggctatggaaggagcaacccaactggcaccattggtgaacctttttctgca 480
            || |||||| ||||||||||||||||  ||||||| |||||||||||||| || ||||||
Sbjct: 1613 ccttctggcagctatggaaggagcaatgcaactggtaccattggtgaacccttctctgca 1672

                                                                        
Query: 481  tcagccaatgcatatgaaatgaacaacatagatacatatggcaacaactctatttatggt 540
             || |||||||||||||| |||||||   |||||||||||||| || ||| |||||||| 
Sbjct: 1673 ccacccaatgcatatgaagtgaacaatgcagatacatatggcagcagctccatttatgga 1732

                                                                        
Query: 541  gactcaacctggaggttcacgtcatctgagatcgatattcctccttttgataatgatctt 600
            |||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||| |||
Sbjct: 1733 gactcaacttggaggttcacgtcatctgagattgatatgcctccttttggtaatgacctt 1792

                  
Query: 601  ggaaat 606
            ||||||
Sbjct: 1793 ggaaat 1798

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>gb|BT018748.1| Zea mays clone EL01N0522F03.d mRNA sequence
          Length = 1884

 Score =  202 bits (102), Expect = 1e-48
 Identities = 354/437 (81%), Gaps = 12/437 (2%)
 Strand = Plus / Plus

                                                                        
Query: 140  gttcaaacagactaggtagccctattgggtacgttggtcttaatgacgattcaggatcca 199
            |||| |||||||| |||||||||||||||||| ||||||||||||| | | | ||||| |
Sbjct: 887  gttcgaacagactgggtagccctattgggtaccttggtcttaatgatgttccgggatcaa 946

                                                                        
Query: 200  tattgagttcaatgggaaggaatgtttggggtaatggaaatgtcaactaccagaacagcc 259
            | |||||||| |||   |||||||||||||||||||||| | | ||||||| ||  |  |
Sbjct: 947  tgttgagttccatgtctaggaatgtttggggtaatggaagtctaaactacccgagtaatc 1006

                                                                        
Query: 260  ctacaaacatgagttcttttgtaccatctggaagtgggagtcaagttggtattactgccg 319
            ||||||| |||||| |||||    || |||||| |||||| |||||  || ||||||  |
Sbjct: 1007 ctacaaatatgagtgcttttacttcacctggaaatgggagccaagtcagtcttactggtg 1066

                                                                        
Query: 320  atggtatcaattggggaggtcctacttctgctcatgggatgggaagcatttcaagccttg 379
            |      |||||||||||||| | |||||| |||||||||||| | ||||||||||||||
Sbjct: 1067 a------caattggggaggtcttccttctgttcatgggatgggcaacatttcaagccttg 1120

                                                                        
Query: 380  ggtct---aacattggccgtgggactggagataa---ctttggtttgccatctggcggct 433
            ||||    ||| |||  |||||  ||||||||||   ||| |||||||  |||||| |||
Sbjct: 1121 ggtcagggaaccttgctcgtggagctggagataataacttcggtttgctttctggcagct 1180

                                                                        
Query: 434  atggaaggagcaacccaactggcaccattggtgaacctttttctgcatcagccaatgcat 493
            |||||||||||||| ||||||| || ||||| || |||||||||||| ||| |||| |||
Sbjct: 1181 atggaaggagcaactcaactggtacaattggcgagcctttttctgcagcaggcaatacat 1240

                                                                        
Query: 494  atgaaatgaacaacatagatacatatggcaacaactctatttatggtgactcaacctgga 553
            ||||  | |||||   |||||||||||| | || |||||||||||||| | || ||||||
Sbjct: 1241 atgatgtaaacaatccagatacatatgggagcagctctatttatggtggcacagcctgga 1300

                             
Query: 554  ggttcacgtcatctgag 570
            ||||||| |||||||||
Sbjct: 1301 ggttcacatcatctgag 1317

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>gb|AY106359.1| Zea mays PCO114626 mRNA sequence
          Length = 1099

 Score =  165 bits (83), Expect = 2e-37
 Identities = 225/271 (83%), Gaps = 6/271 (2%)
 Strand = Plus / Plus

                                                                       
Query: 342 tacttctgctcatgggatgggaagcatttcaagccttgggtct---aacattggccgtgg 398
           |||||||| |||||||||||| | |||||||||||||||  |    ||| ||||||||||
Sbjct: 240 tacttctgttcatgggatgggcaacatttcaagccttggaccgggaaaccttggccgtgg 299

                                                                       
Query: 399 gactggagataac---tttggtttgccatctggcggctatggaaggagcaacccaactgg 455
            || |||||||||   ||||| ||||| |||||   |||||  ||||||||| |||||||
Sbjct: 300 aaccggagataacaactttggattgccttctggaacctatgtgaggagcaactcaactgg 359

                                                                       
Query: 456 caccattggtgaacctttttctgcatcagccaatgcatatgaaatgaacaacatagatac 515
            || ||||| || || |||||||||||||||||| ||||||||  ||||||  ||| | |
Sbjct: 360 tacaattggcgagccattttctgcatcagccaatccatatgaatcgaacaatctaggtgc 419

                                                                       
Query: 516 atatggcaacaactctatttatggtgactcaacctggaggttcacgtcatctgagatcga 575
           |||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||| | ||
Sbjct: 420 atatggcagcagttctatttatggtgactccacctggaggttcaactcatctgaggttga 479

                                          
Query: 576 tattcctccttttgataatgatcttggaaat 606
           ||| |||||||||| | ||||||||||||||
Sbjct: 480 tatacctccttttggtcatgatcttggaaat 510



 Score =  103 bits (52), Expect = 7e-19
 Identities = 147/176 (83%), Gaps = 2/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 106 aatgggcggcaaatgggctcatactacaatggtggttcaaacagactaggtagccctatt 165
           |||||||||||||| || || |||| |||| || ||||||||||| |||| || || |||
Sbjct: 10  aatgggcggcaaataggttcttacttcaatagtagttcaaacagattaggcagtccaatt 69

                                                                       
Query: 166 gggtacgttggtcttaatgacgattcaggatccatattgagttcaatgggaaggaatgtt 225
           || || ||||| |||||||| ||||||||||| ||| |||||||||||   || ||||||
Sbjct: 70  ggttatgttggccttaatgatgattcaggatcaatactgagttcaatgtctagaaatgtt 129

                                                                   
Query: 226 tggggtaatggaaatgtcaactac-cagaacagccctacaaacatgagttcttttg 280
           ||||| ||||||||| | |||||| |||  || ||||||||||| || ||||||||
Sbjct: 130 tggggcaatggaaatcttaactacacagg-caaccctacaaacacgaattcttttg 184

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>gb|BT016400.1| Zea mays clone Contig233 mRNA sequence
          Length = 913

 Score =  157 bits (79), Expect = 5e-35
 Identities = 224/271 (82%), Gaps = 6/271 (2%)
 Strand = Plus / Minus

                                                                       
Query: 342 tacttctgctcatgggatgggaagcatttcaagccttgggtct---aacattggccgtgg 398
           |||||||| |||||||||||| | |||||||||||||||  |    ||| ||||||||||
Sbjct: 877 tacttctgttcatgggatgggcaacatttcaagccttggaccgggaaaccttggccgtgg 818

                                                                       
Query: 399 gactggagataac---tttggtttgccatctggcggctatggaaggagcaacccaactgg 455
            || |||||||||   ||||| ||||| |||||   ||| |  ||||||||| |||||||
Sbjct: 817 aaccggagataacaactttggattgccttctggaacctacgtgaggagcaactcaactgg 758

                                                                       
Query: 456 caccattggtgaacctttttctgcatcagccaatgcatatgaaatgaacaacatagatac 515
            || ||||| || || |||||||||||||||||| ||||||||  ||||||  ||| | |
Sbjct: 757 tacaattggcgagccattttctgcatcagccaatccatatgaatcgaacaatctaggtgc 698

                                                                       
Query: 516 atatggcaacaactctatttatggtgactcaacctggaggttcacgtcatctgagatcga 575
           |||||||| ||  ||||||||||||||||| |||||||||||||  ||||||||| | ||
Sbjct: 697 atatggcagcagttctatttatggtgactccacctggaggttcaactcatctgaggttga 638

                                          
Query: 576 tattcctccttttgataatgatcttggaaat 606
           ||| |||||||||| | ||||||||||||||
Sbjct: 637 tatacctccttttggtcatgatcttggaaat 607

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>ref|XM_662479.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.40068)
           partial mRNA
          Length = 1155

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 187 gattcaggatccatattgagttc 209
           |||||||||||||||||||||||
Sbjct: 938 gattcaggatccatattgagttc 916

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>emb|AL442644.7| Human DNA sequence from clone RP11-342F21 on chromosome 9 Contains a
             novel pseudogene, and the 5' end of a novel gene, complete
             sequence
          Length = 160264

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 493   tatgaaatgaacaacatagata 514
             ||||||||||||||||||||||
Sbjct: 88409 tatgaaatgaacaacatagata 88430

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>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold
          Length = 444202

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 64     aatgcaaattttggtgcaaatt 85
              ||||||||||||||||||||||
Sbjct: 372846 aatgcaaattttggtgcaaatt 372825

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>gb|AC106787.2| Homo sapiens chromosome 5 clone RP11-365I6, complete sequence
          Length = 129667

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 222    tgtttggggtaatggaaatgtc 243
              ||||||||||||||||||||||
Sbjct: 111895 tgtttggggtaatggaaatgtc 111874

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>gb|AC106809.2| Homo sapiens chromosome 5 clone RP11-53K6, complete sequence
          Length = 113848

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 222  tgtttggggtaatggaaatgtc 243
            ||||||||||||||||||||||
Sbjct: 8406 tgtttggggtaatggaaatgtc 8385

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>gb|AC003998.1|AC003998 Human PAC clone RP1-161J9 from 5q31, complete sequence
          Length = 138965

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 222  tgtttggggtaatggaaatgtc 243
            ||||||||||||||||||||||
Sbjct: 4940 tgtttggggtaatggaaatgtc 4961

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>ref|NM_145612.1| Mus musculus cDNA sequence BC005471 (BC005471), mRNA
          Length = 3263

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgggcatgaatgttgaaact 57
            |||||||||||||||||||||
Sbjct: 2838 atgggcatgaatgttgaaact 2818

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>gb|AC125531.3| Mus musculus BAC clone RP23-396D12 from chromosome 10, complete sequence
          Length = 219818

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 78     tgcaaattctagcttcctcaa 98
              |||||||||||||||||||||
Sbjct: 117985 tgcaaattctagcttcctcaa 118005

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>gb|AC123813.4| Mus musculus BAC clone RP24-229D8 from chromosome 8, complete sequence
          Length = 175377

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 488   atgcatatgaaatgaacaaca 508
             |||||||||||||||||||||
Sbjct: 26627 atgcatatgaaatgaacaaca 26647

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>emb|AL451124.13| Human DNA sequence from clone RP11-20P5 on chromosome 9 Contains the 3'
              end of a variant of a novel gene (FLJ31810) and a novel
              pseudogene (FLJ37424), complete sequence
          Length = 164291

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 494    atgaaatgaacaacatagata 514
              |||||||||||||||||||||
Sbjct: 114010 atgaaatgaacaacatagata 113990

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>gb|BC005471.1| Mus musculus cDNA sequence BC005471, mRNA (cDNA clone MGC:6652
            IMAGE:3496918), complete cds
          Length = 3263

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   atgggcatgaatgttgaaact 57
            |||||||||||||||||||||
Sbjct: 2838 atgggcatgaatgttgaaact 2818

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>emb|BX248512.14| Zebrafish DNA sequence from clone CH211-284D12 in linkage group 2,
             complete sequence
          Length = 146757

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     aaatgggttttcttcatttgg 23
             |||||||||||||||||||||
Sbjct: 32916 aaatgggttttcttcatttgg 32896

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>gb|AC145543.3| Homo sapiens chromosome UNKNOWN clone RP11-1278L23, complete sequence
          Length = 221027

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   ttttgtaccatctggaagtgg 296
             |||||||||||||||||||||
Sbjct: 75592 ttttgtaccatctggaagtgg 75612

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>gb|AC159308.4| Mus musculus BAC clone RP23-187B11 from chromosome 9, complete sequence
          Length = 217927

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 37     atgggcatgaatgttgaaact 57
              |||||||||||||||||||||
Sbjct: 158079 atgggcatgaatgttgaaact 158099

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>ref|NM_195812.1| Oryza sativa (japonica cultivar-group) putative retroelement
           (OJ1325D05.3), mRNA
          Length = 1116

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 460 attggtgaacctttttctgc 479
           ||||||||||||||||||||
Sbjct: 760 attggtgaacctttttctgc 779

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>gb|AY686596.1| Apis mellifera Dscam gene, complete cds, alternatively spliced
          Length = 116066

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   agttcttttgtaccatctgg 290
             ||||||||||||||||||||
Sbjct: 20409 agttcttttgtaccatctgg 20390

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>gb|AC113989.6| Mus musculus chromosome 3, clone RP24-130I14, complete sequence
          Length = 159841

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    agccttgggtctaacattgg 392
              ||||||||||||||||||||
Sbjct: 114033 agccttgggtctaacattgg 114052

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>gb|AC148876.2| Pan troglodytes BAC clone CH251-50I16 from Y, complete sequence
          Length = 182194

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    ggcatgaatgttgaaactgggatg 63
             ||||||| ||||||||||||||||
Sbjct: 61841 ggcatgagtgttgaaactgggatg 61818

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>gb|AC146453.3| Pan troglodytes BAC clone CH251-510F17 from Y, complete sequence
          Length = 215114

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    ggcatgaatgttgaaactgggatg 63
             ||||||| ||||||||||||||||
Sbjct: 62180 ggcatgagtgttgaaactgggatg 62203

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>gb|AC147675.2| Pan troglodytes BAC clone CH251-6P20 from Y, complete sequence
          Length = 166567

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     ggcatgaatgttgaaactgggatg 63
              ||||||| ||||||||||||||||
Sbjct: 156975 ggcatgagtgttgaaactgggatg 156952

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>gb|AC009152.8| Homo sapiens chromosome 16 clone RP11-567P19, complete sequence
          Length = 171127

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 579    tcctccttttgataatgatc 598
              ||||||||||||||||||||
Sbjct: 134008 tcctccttttgataatgatc 133989

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>gb|AC123061.4| Mus musculus BAC clone RP23-216H22 from 14, complete sequence
          Length = 193093

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 511   gatacatatggcaacaactctatt 534
             |||||||||||| |||||||||||
Sbjct: 93908 gatacatatggctacaactctatt 93885

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>gb|AC020743.7| Homo sapiens BAC clone RP11-813K3 from 7, complete sequence
          Length = 182528

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 513    tacatatggcaacaactctattta 536
              |||||||||||||| |||||||||
Sbjct: 159459 tacatatggcaacatctctattta 159482

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>emb|AL590784.9| Human DNA sequence from clone RP11-260I7 on chromosome 6, complete
             sequence
          Length = 159219

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     ggaaatgggttttcttcatttggg 24
             |||||||||| |||||||||||||
Sbjct: 74110 ggaaatgggtcttcttcatttggg 74133

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>emb|AL512642.18| Human DNA sequence from clone RP11-469L23 on chromosome 13 Contains the
             ALOX5AP gene for arachidonate 5-lipoxygenase-activating
             protein (FLAP) and a novel gene, complete sequence
          Length = 139255

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   tttggggtaatggaaatgtc 243
             ||||||||||||||||||||
Sbjct: 25312 tttggggtaatggaaatgtc 25293

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>gb|AC134517.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1325D05,
             complete sequence
          Length = 136214

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   attggtgaacctttttctgc 479
             ||||||||||||||||||||
Sbjct: 53204 attggtgaacctttttctgc 53185

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>emb|AL353895.4| Human DNA sequence from clone RP11-503K16 on chromosome 9 Contains the
             3' end of the ADAMTSL1 gene for ADAMTS-like (ADAMTSR1,
             MGC40139) and a ras-related protein family pseudogene,
             complete sequence
          Length = 163163

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   tgtcaactaccagaacagcc 259
             ||||||||||||||||||||
Sbjct: 64748 tgtcaactaccagaacagcc 64767

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>emb|BX571974.6| Zebrafish DNA sequence from clone DKEY-29P4 in linkage group 12,
            complete sequence
          Length = 267018

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 389  ttggccgtgggactggagat 408
            ||||||||||||||||||||
Sbjct: 7050 ttggccgtgggactggagat 7031

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>gb|AC115686.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1325D05,
            complete sequence
          Length = 169500

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  attggtgaacctttttctgc 479
            ||||||||||||||||||||
Sbjct: 6797 attggtgaacctttttctgc 6816

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>dbj|BS000655.1| Pan troglodytes chromosome Y clone:PTB-215M20, complete sequences
          Length = 152092

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    ggcatgaatgttgaaactgggatg 63
             ||||||| ||||||||||||||||
Sbjct: 73949 ggcatgagtgttgaaactgggatg 73926

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>dbj|BS000623.1| Pan troglodytes chromosome Y clone:PTBY-008C04, complete sequences
          Length = 106416

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    ggcatgaatgttgaaactgggatg 63
             ||||||| ||||||||||||||||
Sbjct: 97766 ggcatgagtgttgaaactgggatg 97789

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>dbj|BS000615.1| Pan troglodytes chromosome Y clone:PTBY-009P07, complete sequences
          Length = 105898

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    ggcatgaatgttgaaactgggatg 63
             ||||||| ||||||||||||||||
Sbjct: 78324 ggcatgagtgttgaaactgggatg 78301

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>dbj|BS000566.1| Pan troglodytes chromosome Y clone:PTFY-001D15, complete sequences
          Length = 42798

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 40   ggcatgaatgttgaaactgggatg 63
            ||||||| ||||||||||||||||
Sbjct: 5422 ggcatgagtgttgaaactgggatg 5399

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>dbj|BS000609.1| Pan troglodytes chromosome Y clone:PTB-217K15, complete sequences
          Length = 146625

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    ggcatgaatgttgaaactgggatg 63
             ||||||| ||||||||||||||||
Sbjct: 30436 ggcatgagtgttgaaactgggatg 30459

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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 40       ggcatgaatgttgaaactgggatg 63
                ||||||| ||||||||||||||||
Sbjct: 21967914 ggcatgagtgttgaaactgggatg 21967891



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 40       ggcatgaatgttgaaactgggatg 63
                ||||||| ||||||||||||||||
Sbjct: 21620849 ggcatgagtgttgaaactgggatg 21620872

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>ref|XM_625657.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_520),
           partial mRNA
          Length = 1158

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 190 tcaggatccatattgagttc 209
           ||||||||||||||||||||
Sbjct: 938 tcaggatccatattgagttc 919

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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     attggtgaacctttttctgc 479
               ||||||||||||||||||||
Sbjct: 9181927 attggtgaacctttttctgc 9181908

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>ref|XM_395050.1| PREDICTED: Apis mellifera similar to ENSANGP00000022091
           (LOC411579), mRNA
          Length = 2223

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 agttcttttgtaccatctgg 290
           ||||||||||||||||||||
Sbjct: 788 agttcttttgtaccatctgg 769

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>gb|AC125470.3| Homo sapiens BAC clone RP13-589L22 from 4, complete sequence
          Length = 79926

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   ttgataatgatcttggaaat 606
             ||||||||||||||||||||
Sbjct: 58062 ttgataatgatcttggaaat 58081

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>gb|AC159015.2| Pan troglodytes BAC clone CH251-675K5 from chromosome y, complete
            sequence
          Length = 213574

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 40   ggcatgaatgttgaaactgggatg 63
            ||||||| ||||||||||||||||
Sbjct: 2905 ggcatgagtgttgaaactgggatg 2882

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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    ggaagcatttcaagccttgg 380
              ||||||||||||||||||||
Sbjct: 120832 ggaagcatttcaagccttgg 120851

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>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:B1272H04
          Length = 87113

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  ggaagcatttcaagccttgg 380
            ||||||||||||||||||||
Sbjct: 2546 ggaagcatttcaagccttgg 2565

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>emb|AL449963.2|HS399M15 Homo sapiens chromosome 9 BAC RP11-399M15, complete sequence
          Length = 213216

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    tgtcaactaccagaacagcc 259
              ||||||||||||||||||||
Sbjct: 185496 tgtcaactaccagaacagcc 185515

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>gb|AC121887.4| Mus musculus BAC clone RP24-142B15 from 5, complete sequence
          Length = 234919

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 492   atatgaaatgaacaacatagatac 515
             ||||| ||||||||||||||||||
Sbjct: 72930 atatgtaatgaacaacatagatac 72953

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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     attggtgaacctttttctgc 479
               ||||||||||||||||||||
Sbjct: 9187066 attggtgaacctttttctgc 9187047

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>emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chromosome X, complete
             sequence
          Length = 213187

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   gagataactttggtttgcca 423
             ||||||||||||||||||||
Sbjct: 39399 gagataactttggtttgcca 39418

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>dbj|AP001017.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-712C7, complete
             sequences
          Length = 131000

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   aatgaacaacatagatacat 517
             ||||||||||||||||||||
Sbjct: 76967 aatgaacaacatagatacat 76986


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,624,079
Number of Sequences: 3902068
Number of extensions: 5624079
Number of successful extensions: 99828
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99528
Number of HSP's gapped (non-prelim): 289
length of query: 614
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 591
effective length of database: 17,143,297,704
effective search space: 10131688943064
effective search space used: 10131688943064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result