ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags39j11 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 297 bits (760), Expect = 2e-80 Identities = 138/164 (84%), Positives = 152/164 (92%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+KVG++VDVKVNGA+HKGMPHKFYHGR Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 445 TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF RK ND+LKA AK Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120 Query: 446 ARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 577 A GE ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 177 bits (450), Expect = 2e-44 Identities = 92/158 (58%), Positives = 115/158 (72%), Gaps = 3/158 (1%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 MP +G R+RTR LFAR F+ G + L+TYL +K+GE+VDV N AVHKGMP K+YHGR Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 445 TG VWNVTKRAIGVEINK+V +RIIKKRIHVR++HV+ S C + FL+R NDK+K +A Sbjct: 61 TGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAH 120 Query: 446 -ARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 550 A+ V STKR P PK G ++ +G ET IPY+ Sbjct: 121 VAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 177 bits (450), Expect = 2e-44 Identities = 84/157 (53%), Positives = 115/157 (73%), Gaps = 2/157 (1%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 M HG RSRTR +F R FRK G + L+TYL+ YKVG+ VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 445 TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EFL+R N +AEAK Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120 Query: 446 ARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 550 A+G + KRQPA P+ +V EG +T+ P+PY+ Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 176 bits (447), Expect = 4e-44 Identities = 83/157 (52%), Positives = 115/157 (73%), Gaps = 2/157 (1%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 M HG RSRTR +F R FRK G + ++TYL+ YKVG+ VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 445 TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EFL+R N +AEAK Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120 Query: 446 ARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 550 A+G + KRQPA P+ +V EG +T+ P+PY+ Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 171 bits (433), Expect = 2e-42 Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 2/157 (1%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 MP +G+R+RTR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 445 TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++FL R N+ + EAK Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120 Query: 446 ARGEVISTKRQPAGPKPGFMVEGTTIETVT--PIPYD 550 A+G+ + +RQPA P V E VT P+ YD Sbjct: 121 AQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 171 bits (433), Expect = 2e-42 Identities = 83/157 (52%), Positives = 113/157 (71%), Gaps = 2/157 (1%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 MP +G+R+RTR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 445 TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV+ S+C ++FL R N+ + EAK Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120 Query: 446 ARGEVISTKRQPAGPKPGFMVEGTTIETVT--PIPYD 550 A+G+ + +RQPA P V E VT P+ YD Sbjct: 121 AQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 159 bits (402), Expect = 7e-39 Identities = 77/152 (50%), Positives = 104/152 (68%), Gaps = 2/152 (1%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 G R TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 281 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 460 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G Sbjct: 65 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 461 ISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 550 + KRQPA P+ V G E + PIPY+ Sbjct: 125 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 158 bits (399), Expect = 2e-38 Identities = 76/152 (50%), Positives = 104/152 (68%), Gaps = 2/152 (1%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 G R TR +F+RP+RK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 281 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 460 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G Sbjct: 65 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 461 ISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 550 + KRQPA P+ V G E + PIPY+ Sbjct: 125 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 154 bits (389), Expect = 2e-37 Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 2/152 (1%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 G R TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 281 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 460 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G Sbjct: 65 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 461 ISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 550 + QPA P+ V G E + PIPY+ Sbjct: 125 VQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 154 bits (388), Expect = 3e-37 Identities = 75/152 (49%), Positives = 102/152 (67%), Gaps = 2/152 (1%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 G R TR +F+RPFRK G + L TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 281 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 460 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G Sbjct: 65 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 461 ISTKRQPAGPKPGFMV--EGTTIETVTPIPYD 550 + KR A P+ V G E + PIPY+ Sbjct: 125 VQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 143 bits (360), Expect = 5e-34 Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 3/155 (1%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 GLR TR +FAR FRK G L+TY YK G+ VD+K NGA KGMP K YHGRTGR++ Sbjct: 5 GLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIF 64 Query: 281 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGE- 457 NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +FL R +ND+ + AK+ G+ Sbjct: 65 NVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQP 124 Query: 458 VISTKRQPAGPKPGFMV--EGTTIETVTPIPYDVV 556 V + KR P P+ V + E + P+ +++V Sbjct: 125 VPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 159
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 140 bits (354), Expect = 3e-33 Identities = 71/164 (43%), Positives = 102/164 (62%), Gaps = 9/164 (5%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 MP +G RTR LF RPFR G +T L TYKVG++V + N ++ G+P+K +HG+ Sbjct: 1 MPLSNGRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGK 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKL-------NND 424 TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++FL+RK N Sbjct: 61 TGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNI 120 Query: 425 KLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIE--TVTPIPYD 550 +LK E K + KR P P+P +++G I+ TV P+ ++ Sbjct: 121 QLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 138 bits (348), Expect = 1e-32 Identities = 67/147 (45%), Positives = 99/147 (67%), Gaps = 1/147 (0%) Frame = +2 Query: 113 RTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 292 R D+F++ FR++G I L YL YK G+ VD+K +G+V K PHK YHG+TGR++NVT+ Sbjct: 8 RGSDMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQ 67 Query: 293 RAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTK 472 A+G+ +NKQV RII KRI+VR+EH++ S+ F+QR N++ + EA+ + ++ K Sbjct: 68 HAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLK 127 Query: 473 RQPAGPKPGFMVEGTT-IETVTPIPYD 550 RQP P+ G V + E V PIPY+ Sbjct: 128 RQPQQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 117 bits (294), Expect = 2e-26 Identities = 59/132 (44%), Positives = 92/132 (69%), Gaps = 1/132 (0%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 G R TR LF++ RK G ++ YL Y++G+ VD+ VN A+ KGMPHK+YHGRTGRV+ Sbjct: 5 GYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVY 64 Query: 281 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEV 460 +V R++ V + K+V + + K+I VR+EHV+ SRC+EE +R L ++ +A++RG V Sbjct: 65 DVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVV 124 Query: 461 IS-TKRQPAGPK 493 ++ +KR+ GP+ Sbjct: 125 LAPSKRKIEGPR 136
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 74.3 bits (181), Expect = 3e-13 Identities = 33/57 (57%), Positives = 41/57 (71%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTG 271 G R TR +F+RPFRK G + L TY+R YK G+ VD+K G V KG+PHK YHG+TG Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 70.1 bits (170), Expect = 6e-12 Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 G RS+TR L + R+KG I L+ + Y GE+V VK+N ++HKGMPH+ YHG+ G V Sbjct: 7 GYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV 66 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 379 V KR E+ +G++ ++ + VR EH+ P Sbjct: 67 --VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 63.9 bits (154), Expect = 4e-10 Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 2/98 (2%) Frame = +2 Query: 92 AGHGLRSRTRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHK-GMPHKFYHGR 265 A G R+RTR L +P R+KG I L+TYLR Y+VG+ V + +N + GMPH+ +HG Sbjct: 4 APRGYRNRTRRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGL 63 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 379 TG V V KR E+ +G + +K + V H++P Sbjct: 64 TGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKP 97
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 61.6 bits (148), Expect = 2e-09 Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIA-LTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 G R+RTR L + R++G + L+ + +K G++V +K+N +VHKGMPH+ YHG+ G + Sbjct: 7 GYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVI 66 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 373 KR + +G++ +K I VR EH+ Sbjct: 67 QG--KRGKAYIVRVTLGDK--EKVIIVRPEHL 94
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 61.2 bits (147), Expect = 3e-09 Identities = 34/94 (36%), Positives = 60/94 (63%), Gaps = 1/94 (1%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYI-ALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 G R+R+R L + R++G + +L+ + YK G++V VK+N +VH+GMPH+ Y G+ G++ Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI 66 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 379 + KR ++ +G++ +K I VR EH+ P Sbjct: 67 --IGKRGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 60.8 bits (146), Expect = 3e-09 Identities = 34/94 (36%), Positives = 55/94 (58%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 G R +TR ++ R++G +T LR +K GE+V + ++ +VHKGMPH +HGRTG V Sbjct: 7 GFRRKTRKKLSKHPRERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVV 66 Query: 281 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPS 382 RA V++ G + K+I +H++P+ Sbjct: 67 GKQGRAFIVKVRD--GGKY--KQIIAYPQHLRPA 96
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 59.3 bits (142), Expect = 1e-08 Identities = 35/93 (37%), Positives = 53/93 (56%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 G RSRTR + R++G L + ++ G+ V + ++ +VHKGMPH YHGRTG V Sbjct: 7 GFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVV 66 Query: 281 NVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 379 RA V+I G + +K++ V EH++P Sbjct: 67 GRQGRAYIVKIRD--GGK--EKKLIVYPEHLKP 95
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 58.5 bits (140), Expect = 2e-08 Identities = 31/96 (32%), Positives = 52/96 (54%) Frame = +2 Query: 98 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 H R +TR + R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 385 V KR + GN++ K + + H++P + Sbjct: 66 --VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 58.2 bits (139), Expect = 2e-08 Identities = 31/96 (32%), Positives = 52/96 (54%) Frame = +2 Query: 98 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 H R +TR + R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 385 V KR + GN++ K + + H++P + Sbjct: 66 --VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 57.8 bits (138), Expect = 3e-08 Identities = 30/96 (31%), Positives = 54/96 (56%) Frame = +2 Query: 98 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 H R +TR ++ R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 385 V KR + + G+++ K + + H++P + Sbjct: 66 --VGKRGEAYIVEIKDGSKV--KTLFIHPVHLRPQK 97
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 55.5 bits (132), Expect = 1e-07 Identities = 30/96 (31%), Positives = 51/96 (53%) Frame = +2 Query: 98 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 H R +TR ++ R++G LT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRGKLSKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 385 V KR + G ++ K + H++P + Sbjct: 66 --VGKRGDAYIVQITDGGKV--KTFFIHPVHLRPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 54.7 bits (130), Expect = 2e-07 Identities = 35/100 (35%), Positives = 53/100 (53%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 M G RS+TR + R+KG LT L+ Y G+ V V ++ +V KGMPH +HG+ Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGK 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 385 TG V V +R + + G + K I R +H++ S+ Sbjct: 61 TGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLRESK 96
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 53.5 bits (127), Expect = 5e-07 Identities = 32/94 (34%), Positives = 52/94 (55%) Frame = +2 Query: 98 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 HG R ++ + R+KG + + +L+T+ VG+ V + + A KGMPH + GRTG V Sbjct: 6 HGFRFKSGRKLRKKVREKG-VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVV 64 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 379 RA V++ G ++ K + VR EH++P Sbjct: 65 IGQRGRAYLVQVRD--GGKM--KTLIVRPEHLKP 94
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 52.0 bits (123), Expect = 2e-06 Identities = 32/94 (34%), Positives = 49/94 (52%) Frame = +2 Query: 98 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 HG R +TR L + R+KG L+ L YKVG+ V + ++ PH+ Y G+ G V Sbjct: 6 HGYRYKTRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTV 65 Query: 278 WNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 379 + RA +E +G++ KK I EH++P Sbjct: 66 VGIRGRAYVIE--TFLGDK--KKIIITTPEHLKP 95
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 51.2 bits (121), Expect = 3e-06 Identities = 29/97 (29%), Positives = 53/97 (54%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 M G RS+TR + R +T ++++ G+ V + ++ ++H+G PH +HG+ Sbjct: 1 MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGK 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQ 376 TGRV + ++ V + GN+ K++ VR EH+Q Sbjct: 61 TGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>RL21_NANEQ (Q74N21) 50S ribosomal protein L21e| Length = 98 Score = 48.5 bits (114), Expect = 2e-05 Identities = 29/94 (30%), Positives = 47/94 (50%) Frame = +2 Query: 95 GHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGR 274 G G R +TRD ++ R++G + +T L+ + + V + + + H GMPH YHG G Sbjct: 6 GKGFRRKTRDKLSKHPRQRGKLTITRILQKFNNNDKVAIVIEPSWHYGMPHPRYHGLVGT 65 Query: 275 VWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQ 376 V V KR E+ + KK + V H++ Sbjct: 66 V--VGKRGNCYEVELEFNGE--KKLLIVHPAHLK 95
>RL21_PICTO (Q6L228) 50S ribosomal protein L21e| Length = 97 Score = 43.9 bits (102), Expect = 4e-04 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Frame = +2 Query: 101 GLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRVW 280 G RS +R + + + KG + ++T++VG+ + +N AV GMPH + G TG + Sbjct: 7 GPRSGSRRVMTKSVKNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITGVIT 66 Query: 281 NVTKRAIGVEINKQVGN---RIIKKRIHVR 361 + + ++ +VGN ++I +H+R Sbjct: 67 GM--QGSCYILSFKVGNVEKKVIAAPVHLR 94
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 43.9 bits (102), Expect = 4e-04 Identities = 25/100 (25%), Positives = 52/100 (52%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 M HG + TR + R++G ++ ++ ++ G+ V + ++ +V KGMP+ + G Sbjct: 1 MTNSHGEKRCTRYKLQKTVRERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGS 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 385 TG+V R+ +E+ GN + K + +H++P + Sbjct: 61 TGKVIGQRGRSYVLEVRS--GNAM--KEVFSLPQHLKPQK 96
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 41.2 bits (95), Expect = 0.003 Identities = 25/100 (25%), Positives = 52/100 (52%) Frame = +2 Query: 86 MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 265 M HG R TR + R++G ++ ++ ++ G+ V + ++ +V KGMP+ + G Sbjct: 1 MTNSHGERRCTRYKLQKTVRERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGF 60 Query: 266 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 385 TG+V + +R + + GN + K + +H++P + Sbjct: 61 TGKV--IGQRGRSYILAVREGNSM--KEVFSVPQHLKPQK 96
>RL21_XENLA (P49628) 60S ribosomal protein L21 (Fragment)| Length = 33 Score = 40.4 bits (93), Expect = 0.005 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +2 Query: 134 RPFRKKGYIALTTYLRTYKVGEHVDVKVNGAV 229 RPFRK G + L+TY+R YK G+ VD+K G + Sbjct: 1 RPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTI 32
>RL21_THEAC (Q9HIN8) 50S ribosomal protein L21e| Length = 98 Score = 36.2 bits (82), Expect = 0.091 Identities = 16/60 (26%), Positives = 32/60 (53%) Frame = +2 Query: 98 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 HG RS +R + ++ + +++ ++ G+ V + + +VH GMP+ + G TG V Sbjct: 6 HGPRSGSRRKLTKSAEERKRSVIGRFMQEFEPGDRVAIDIEPSVHAGMPYHRFQGYTGVV 65
>RL21_THEVO (Q97BZ1) 50S ribosomal protein L21e| Length = 98 Score = 34.3 bits (77), Expect = 0.35 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Frame = +2 Query: 98 HGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGRTGRV 277 HG RS +R + ++ + ++ + G+ V + + +VH GMP+ + G TG V Sbjct: 6 HGPRSGSRRKLTKSKEERKKSIIGRMMQEFSPGDRVAIDIEPSVHNGMPYHRFQGYTGIV 65 Query: 278 WNVTKRA--IGVEINKQVGNRIIKKRIHVR 361 +GV++ + +I +H++ Sbjct: 66 EGAQGNCYKVGVKVG-SLTKYVIASPVHLK 94
>PACC_KLULA (Q6CQ07) pH-response transcription factor pacC/RIM101| Length = 517 Score = 30.8 bits (68), Expect = 3.8 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +2 Query: 347 RIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKP 496 R+HV+++ S CN++F + + LK K E +S ++ GPKP Sbjct: 169 RVHVQLKPFACSTCNKKFKRPQ----DLKKHLKVHNEELSLLKKKRGPKP 214
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 29.6 bits (65), Expect = 8.5 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 329 NRIIKKRIHVRVEHVQPSRCNEEFLQR 409 NRI +RIH+ +H Q ++C E F +R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,072,785 Number of Sequences: 219361 Number of extensions: 1203990 Number of successful extensions: 4424 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 4304 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4419 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
